Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79482.t1 | XP_003601777.1 | 100 | 66 | 0 | 0 | 33 | 98 | 122 | 187 | 5.30E-27 | 130.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79482.t1 | G7JBY5 | 100.0 | 66 | 0 | 0 | 33 | 98 | 122 | 187 | 3.8e-27 | 130.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049149 | MS.gene79482 | 0.826745 | 2.29E-54 | -1.69E-46 |
| MS.gene049150 | MS.gene79482 | 0.812463 | 4.19E-51 | -1.69E-46 |
| MS.gene049153 | MS.gene79482 | 0.816651 | 4.95E-52 | -1.69E-46 |
| MS.gene049284 | MS.gene79482 | 0.801728 | 7.85E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene79482 | 0.806447 | 8.19E-50 | -1.69E-46 |
| MS.gene049356 | MS.gene79482 | 0.827036 | 1.95E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene79482 | 0.819939 | 8.92E-53 | -1.69E-46 |
| MS.gene049480 | MS.gene79482 | 0.804753 | 1.86E-49 | -1.69E-46 |
| MS.gene049661 | MS.gene79482 | 0.822176 | 2.73E-53 | -1.69E-46 |
| MS.gene049662 | MS.gene79482 | 0.822155 | 2.76E-53 | -1.69E-46 |
| MS.gene049758 | MS.gene79482 | 0.84741 | 1.18E-59 | -1.69E-46 |
| MS.gene049910 | MS.gene79482 | 0.804411 | 2.19E-49 | -1.69E-46 |
| MS.gene049915 | MS.gene79482 | 0.804197 | 2.42E-49 | -1.69E-46 |
| MS.gene050060 | MS.gene79482 | 0.810664 | 1.03E-50 | -1.69E-46 |
| MS.gene050128 | MS.gene79482 | 0.851495 | 8.55E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene79482 | 0.867425 | 1.38E-65 | -1.69E-46 |
| MS.gene050397 | MS.gene79482 | 0.852248 | 5.23E-61 | -1.69E-46 |
| MS.gene050400 | MS.gene79482 | 0.805167 | 1.52E-49 | -1.69E-46 |
| MS.gene050404 | MS.gene79482 | 0.819141 | 1.36E-52 | -1.69E-46 |
| MS.gene050406 | MS.gene79482 | 0.858712 | 6.83E-63 | -1.69E-46 |
| MS.gene050426 | MS.gene79482 | -0.82954 | 4.86E-55 | -1.69E-46 |
| MS.gene050464 | MS.gene79482 | 0.888675 | 4.78E-73 | -1.69E-46 |
| MS.gene050529 | MS.gene79482 | 0.888054 | 8.29E-73 | -1.69E-46 |
| MS.gene050670 | MS.gene79482 | 0.859111 | 5.18E-63 | -1.69E-46 |
| MS.gene050971 | MS.gene79482 | 0.846184 | 2.55E-59 | -1.69E-46 |
| MS.gene05101 | MS.gene79482 | 0.810961 | 8.89E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene79482 | 0.849117 | 3.97E-60 | -1.69E-46 |
| MS.gene051471 | MS.gene79482 | 0.846778 | 1.75E-59 | -1.69E-46 |
| MS.gene051525 | MS.gene79482 | 0.800966 | 1.12E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene79482 | 0.836287 | 1.02E-56 | -1.69E-46 |
| MS.gene051983 | MS.gene79482 | 0.811108 | 8.26E-51 | -1.69E-46 |
| MS.gene052077 | MS.gene79482 | 0.84956 | 2.99E-60 | -1.69E-46 |
| MS.gene052078 | MS.gene79482 | 0.860385 | 2.14E-63 | -1.69E-46 |
| MS.gene052178 | MS.gene79482 | 0.844614 | 6.78E-59 | -1.69E-46 |
| MS.gene052188 | MS.gene79482 | 0.893242 | 7.54E-75 | -1.69E-46 |
| MS.gene052253 | MS.gene79482 | 0.855145 | 7.68E-62 | -1.69E-46 |
| MS.gene052310 | MS.gene79482 | 0.868491 | 6.28E-66 | -1.69E-46 |
| MS.gene052340 | MS.gene79482 | 0.884444 | 1.91E-71 | -1.69E-46 |
| MS.gene052469 | MS.gene79482 | 0.816828 | 4.52E-52 | -1.69E-46 |
| MS.gene052485 | MS.gene79482 | 0.822673 | 2.09E-53 | -1.69E-46 |
| MS.gene053073 | MS.gene79482 | 0.821662 | 3.58E-53 | -1.69E-46 |
| MS.gene053103 | MS.gene79482 | 0.809021 | 2.32E-50 | -1.69E-46 |
| MS.gene05316 | MS.gene79482 | 0.850645 | 1.49E-60 | -1.69E-46 |
| MS.gene053209 | MS.gene79482 | 0.837358 | 5.45E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene79482 | 0.831458 | 1.65E-55 | -1.69E-46 |
| MS.gene053557 | MS.gene79482 | 0.88688 | 2.33E-72 | -1.69E-46 |
| MS.gene053758 | MS.gene79482 | 0.822707 | 2.05E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene79482 | 0.837083 | 6.41E-57 | -1.69E-46 |
| MS.gene053912 | MS.gene79482 | 0.825043 | 5.81E-54 | -1.69E-46 |
| MS.gene053928 | MS.gene79482 | 0.832801 | 7.68E-56 | -1.69E-46 |
| MS.gene054123 | MS.gene79482 | 0.841287 | 5.21E-58 | -1.69E-46 |
| MS.gene054349 | MS.gene79482 | 0.840855 | 6.76E-58 | -1.69E-46 |
| MS.gene054955 | MS.gene79482 | 0.862967 | 3.48E-64 | -1.69E-46 |
| MS.gene055116 | MS.gene79482 | 0.876443 | 1.39E-68 | -1.69E-46 |
| MS.gene055277 | MS.gene79482 | 0.829675 | 4.51E-55 | -1.69E-46 |
| MS.gene055390 | MS.gene79482 | 0.810631 | 1.05E-50 | -1.69E-46 |
| MS.gene055422 | MS.gene79482 | 0.864879 | 8.85E-65 | -1.69E-46 |
| MS.gene055533 | MS.gene79482 | 0.803522 | 3.35E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene79482 | 0.826102 | 3.26E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene79482 | -0.817187 | 3.75E-52 | -1.69E-46 |
| MS.gene055604 | MS.gene79482 | 0.810032 | 1.41E-50 | -1.69E-46 |
| MS.gene056191 | MS.gene79482 | 0.826577 | 2.51E-54 | -1.69E-46 |
| MS.gene056233 | MS.gene79482 | 0.823548 | 1.31E-53 | -1.69E-46 |
| MS.gene056407 | MS.gene79482 | 0.830527 | 2.79E-55 | -1.69E-46 |
| MS.gene056410 | MS.gene79482 | 0.806283 | 8.87E-50 | -1.69E-46 |
| MS.gene056511 | MS.gene79482 | 0.824937 | 6.16E-54 | -1.69E-46 |
| MS.gene056609 | MS.gene79482 | 0.839641 | 1.40E-57 | -1.69E-46 |
| MS.gene056612 | MS.gene79482 | 0.84522 | 4.65E-59 | -1.69E-46 |
| MS.gene056659 | MS.gene79482 | 0.839316 | 1.70E-57 | -1.69E-46 |
| MS.gene056719 | MS.gene79482 | 0.803926 | 2.76E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene79482 | -0.844826 | 5.94E-59 | -1.69E-46 |
| MS.gene056979 | MS.gene79482 | 0.811833 | 5.74E-51 | -1.69E-46 |
| MS.gene05702 | MS.gene79482 | 0.842889 | 1.96E-58 | -1.69E-46 |
| MS.gene057124 | MS.gene79482 | 0.82636 | 2.83E-54 | -1.69E-46 |
| MS.gene057396 | MS.gene79482 | 0.861591 | 9.21E-64 | -1.69E-46 |
| MS.gene057448 | MS.gene79482 | 0.857747 | 1.32E-62 | -1.69E-46 |
| MS.gene057449 | MS.gene79482 | 0.846937 | 1.59E-59 | -1.69E-46 |
| MS.gene057450 | MS.gene79482 | 0.861173 | 1.24E-63 | -1.69E-46 |
| MS.gene057537 | MS.gene79482 | 0.820697 | 5.98E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene79482 | 0.809087 | 2.25E-50 | -1.69E-46 |
| MS.gene057796 | MS.gene79482 | 0.830642 | 2.62E-55 | -1.69E-46 |
| MS.gene057823 | MS.gene79482 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene057927 | MS.gene79482 | 0.800523 | 1.39E-48 | -1.69E-46 |
| MS.gene058002 | MS.gene79482 | 0.840768 | 7.13E-58 | -1.69E-46 |
| MS.gene058007 | MS.gene79482 | 0.807395 | 5.16E-50 | -1.69E-46 |
| MS.gene058082 | MS.gene79482 | 0.846113 | 2.66E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene79482 | 0.853782 | 1.90E-61 | -1.69E-46 |
| MS.gene058142 | MS.gene79482 | 0.837384 | 5.37E-57 | -1.69E-46 |
| MS.gene058276 | MS.gene79482 | 0.829589 | 4.73E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene79482 | 0.828195 | 1.03E-54 | -1.69E-46 |
| MS.gene058365 | MS.gene79482 | 0.801728 | 7.85E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene79482 | 0.844104 | 9.29E-59 | -1.69E-46 |
| MS.gene058700 | MS.gene79482 | 0.805222 | 1.48E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene79482 | 0.803806 | 2.92E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene79482 | 0.813565 | 2.40E-51 | -1.69E-46 |
| MS.gene05886 | MS.gene79482 | 0.807078 | 6.03E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene79482 | 0.87909 | 1.66E-69 | -1.69E-46 |
| MS.gene05907 | MS.gene79482 | 0.861441 | 1.02E-63 | -1.69E-46 |
| MS.gene059285 | MS.gene79482 | 0.853128 | 2.93E-61 | -1.69E-46 |
| MS.gene059294 | MS.gene79482 | 0.8589 | 6.00E-63 | -1.69E-46 |
| MS.gene059326 | MS.gene79482 | 0.805576 | 1.25E-49 | -1.69E-46 |
| MS.gene059342 | MS.gene79482 | 0.803366 | 3.61E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene79482 | 0.860025 | 2.75E-63 | -1.69E-46 |
| MS.gene059420 | MS.gene79482 | 0.828297 | 9.72E-55 | -1.69E-46 |
| MS.gene059518 | MS.gene79482 | 0.831472 | 1.64E-55 | -1.69E-46 |
| MS.gene059536 | MS.gene79482 | 0.805157 | 1.53E-49 | -1.69E-46 |
| MS.gene059597 | MS.gene79482 | 0.839292 | 1.73E-57 | -1.69E-46 |
| MS.gene05959 | MS.gene79482 | 0.832818 | 7.61E-56 | -1.69E-46 |
| MS.gene059676 | MS.gene79482 | 0.849953 | 2.32E-60 | -1.69E-46 |
| MS.gene059688 | MS.gene79482 | 0.866649 | 2.44E-65 | -1.69E-46 |
| MS.gene059692 | MS.gene79482 | 0.871186 | 8.28E-67 | -1.69E-46 |
| MS.gene059695 | MS.gene79482 | 0.868562 | 5.96E-66 | -1.69E-46 |
| MS.gene059708 | MS.gene79482 | 0.80367 | 3.12E-49 | -1.69E-46 |
| MS.gene059807 | MS.gene79482 | 0.852331 | 4.95E-61 | -1.69E-46 |
| MS.gene05984 | MS.gene79482 | 0.868667 | 5.51E-66 | -1.69E-46 |
| MS.gene059894 | MS.gene79482 | 0.862118 | 6.35E-64 | -1.69E-46 |
| MS.gene059960 | MS.gene79482 | 0.800496 | 1.40E-48 | -1.69E-46 |
| MS.gene059974 | MS.gene79482 | 0.800341 | 1.51E-48 | -1.69E-46 |
| MS.gene06037 | MS.gene79482 | 0.829497 | 4.98E-55 | -1.69E-46 |
| MS.gene060403 | MS.gene79482 | 0.808308 | 3.30E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene79482 | 0.824544 | 7.62E-54 | -1.69E-46 |
| MS.gene060495 | MS.gene79482 | 0.816383 | 5.69E-52 | -1.69E-46 |
| MS.gene060496 | MS.gene79482 | 0.81162 | 6.39E-51 | -1.69E-46 |
| MS.gene060818 | MS.gene79482 | 0.839695 | 1.36E-57 | -1.69E-46 |
| MS.gene06090 | MS.gene79482 | 0.802522 | 5.39E-49 | -1.69E-46 |
| MS.gene061041 | MS.gene79482 | 0.83652 | 8.92E-57 | -1.69E-46 |
| MS.gene061049 | MS.gene79482 | 0.885572 | 7.24E-72 | -1.69E-46 |
| MS.gene061051 | MS.gene79482 | -0.853151 | 2.89E-61 | -1.69E-46 |
| MS.gene061154 | MS.gene79482 | 0.865848 | 4.38E-65 | -1.69E-46 |
| MS.gene061159 | MS.gene79482 | 0.851394 | 9.13E-61 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79482.t1 | MTR_3g085280 | 95.714 | 70 | 3 | 0 | 29 | 98 | 118 | 187 | 3.64e-41 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene79482.t1 | AT1G27385 | 73.239 | 71 | 19 | 0 | 28 | 98 | 114 | 184 | 3.96e-30 | 106 |
| MS.gene79482.t1 | AT1G27385 | 73.239 | 71 | 19 | 0 | 28 | 98 | 113 | 183 | 4.08e-30 | 106 |
| MS.gene79482.t1 | AT1G27385 | 73.239 | 71 | 19 | 0 | 28 | 98 | 114 | 184 | 7.23e-30 | 106 |
| MS.gene79482.t1 | AT1G27385 | 73.239 | 71 | 19 | 0 | 28 | 98 | 113 | 183 | 1.12e-29 | 106 |
Find 34 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGGTGTTATCGTTCTTC+AGG | 0.282030 | 3.4:+79647509 | None:intergenic |
| TTGGACTGGCCCAATGTTTA+CGG | 0.293987 | 3.4:+79644095 | None:intergenic |
| TGAATACATACCCAACTGTT+AGG | 0.369842 | 3.4:-79646314 | MS.gene79482:CDS |
| CCAAGTTGTTTCCAGCGAAC+AGG | 0.415316 | 3.4:-79644076 | None:intergenic |
| ATAAAACATACCTGGGGAAT+GGG | 0.419641 | 3.4:+79646213 | None:intergenic |
| CCTGTTCGCTGGAAACAACT+TGG | 0.461413 | 3.4:+79644076 | None:intergenic |
| CATAAAACATACCTGGGGAA+TGG | 0.489276 | 3.4:+79646212 | None:intergenic |
| GAATACATACCCAACTGTTA+GGG | 0.490009 | 3.4:-79646313 | MS.gene79482:CDS |
| AATATGTGTCCGTAAACATT+GGG | 0.511909 | 3.4:-79644104 | MS.gene79482:CDS |
| AAATATGTGTCCGTAAACAT+TGG | 0.512566 | 3.4:-79644105 | MS.gene79482:CDS |
| CTGAAGAACGATAACACCAT+TGG | 0.519909 | 3.4:-79647508 | MS.gene79482:CDS |
| TTCTCTTTGCAAAATCGCCC+TGG | 0.521786 | 3.4:+79647552 | None:intergenic |
| GGGTTCACTGCAATAGGAAC+CGG | 0.532077 | 3.4:-79646291 | MS.gene79482:CDS |
| CATTGGGAAGCTCACCGTTA+CGG | 0.532571 | 3.4:-79647491 | MS.gene79482:intron |
| AGGCAGAAATACCTGTTCGC+TGG | 0.537747 | 3.4:+79644065 | None:intergenic |
| TCGCTGGAAACAACTTGGAC+TGG | 0.541126 | 3.4:+79644081 | None:intergenic |
| ATACCTGGGGAATGGGCTGT+TGG | 0.541945 | 3.4:+79646220 | None:intergenic |
| TGAAGAACGATAACACCATT+GGG | 0.545861 | 3.4:-79647507 | MS.gene79482:CDS |
| TTCACTGCAATAGGAACCGG+TGG | 0.562823 | 3.4:-79646288 | MS.gene79482:CDS |
| GGATGACTTCGTGCAAGCTA+TGG | 0.570776 | 3.4:-79646265 | MS.gene79482:CDS |
| AATCCAACAGCCCATTCCCC+AGG | 0.580170 | 3.4:-79646223 | MS.gene79482:intron |
| AAAAGATGGAGAAAATTACC+AGG | 0.586475 | 3.4:-79647570 | None:intergenic |
| GAAGCACAAGGTATCAGCAA+GGG | 0.626581 | 3.4:-79644130 | MS.gene79482:CDS |
| TGAAGCACAAGGTATCAGCA+AGG | 0.632271 | 3.4:-79644131 | MS.gene79482:CDS |
| CGTAACGGTGAGCTTCCCAA+TGG | 0.635505 | 3.4:+79647492 | None:intergenic |
| AAGCACAAGGTATCAGCAAG+GGG | 0.636193 | 3.4:-79644129 | MS.gene79482:CDS |
| CTAGAATGTCATCACCGTAA+CGG | 0.639767 | 3.4:+79647477 | None:intergenic |
| AATACATACCCAACTGTTAG+GGG | 0.655407 | 3.4:-79646312 | MS.gene79482:CDS |
| ACAGGGGAGTGTGAAGCACA+AGG | 0.655631 | 3.4:-79644142 | MS.gene79482:intron |
| TTGCACGAAGTCATCCCCAC+CGG | 0.656764 | 3.4:+79646272 | None:intergenic |
| CACTGCAATAGGAACCGGTG+GGG | 0.661994 | 3.4:-79646286 | MS.gene79482:CDS |
| ATACATACCCAACTGTTAGG+GGG | 0.700615 | 3.4:-79646311 | MS.gene79482:CDS |
| TCACTGCAATAGGAACCGGT+GGG | 0.708899 | 3.4:-79646287 | MS.gene79482:CDS |
| AAAGATGGAGAAAATTACCA+GGG | 0.716145 | 3.4:-79647569 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTTTTGAACA+AGG | - | chr3.4:79646853-79646872 | MS.gene79482:intron | 10.0% |
| !! | ACCAAATATTATTCTTATAA+AGG | - | chr3.4:79645651-79645670 | MS.gene79482:intron | 15.0% |
| !! | ACCTTTATAAGAATAATATT+TGG | + | chr3.4:79645655-79645674 | None:intergenic | 15.0% |
| !! | TAACAATTTAATACAATTCT+TGG | + | chr3.4:79646044-79646063 | None:intergenic | 15.0% |
| !! | TACAGAAAAAAATTAACAAA+GGG | - | chr3.4:79644469-79644488 | MS.gene79482:intron | 15.0% |
| !! | TGAAAAAAATAATGATAAGT+TGG | - | chr3.4:79644561-79644580 | MS.gene79482:intron | 15.0% |
| !! | TTACAGAAAAAAATTAACAA+AGG | - | chr3.4:79644468-79644487 | MS.gene79482:intron | 15.0% |
| !!! | TTTATTTAATTTCCTCTAAA+TGG | + | chr3.4:79644305-79644324 | None:intergenic | 15.0% |
| !! | AATTAAATCAAATGTGAAGA+TGG | + | chr3.4:79644982-79645001 | None:intergenic | 20.0% |
| !! | GTATAAAAAAAAAGTTGTTG+CGG | + | chr3.4:79645571-79645590 | None:intergenic | 20.0% |
| !! | TCAAAAGTTAGTATTTAGAA+GGG | - | chr3.4:79646932-79646951 | MS.gene79482:intron | 20.0% |
| !! | TTAAAAGTAAAGGTTTGAAT+TGG | + | chr3.4:79644789-79644808 | None:intergenic | 20.0% |
| !!! | AATAAAGTACTTTTTCTTCT+TGG | - | chr3.4:79644319-79644338 | MS.gene79482:intron | 20.0% |
| !!! | AGCCTAAAATTTTCTTATTT+GGG | + | chr3.4:79647017-79647036 | None:intergenic | 20.0% |
| !!! | ATCTATCTGCTAAATATTTT+TGG | - | chr3.4:79645995-79646014 | MS.gene79482:intron | 20.0% |
| !!! | ATGAACAGTTTTCATTAATA+TGG | - | chr3.4:79647416-79647435 | MS.gene79482:intron | 20.0% |
| !!! | CTAAATATTTTTGGCTTATA+AGG | - | chr3.4:79646004-79646023 | MS.gene79482:intron | 20.0% |
| !!! | TAGCCTAAAATTTTCTTATT+TGG | + | chr3.4:79647018-79647037 | None:intergenic | 20.0% |
| !!! | TCAATACTTTTTCAGAAATT+TGG | - | chr3.4:79645480-79645499 | MS.gene79482:intron | 20.0% |
| ! | AAAGAGACAGAAAAAAACAA+TGG | - | chr3.4:79644708-79644727 | MS.gene79482:intron | 25.0% |
| ! | AAGTTGCACCTATTTATTTA+GGG | - | chr3.4:79645511-79645530 | MS.gene79482:intron | 25.0% |
| ! | AATGTTAACATATTGCTTAC+AGG | - | chr3.4:79647482-79647501 | MS.gene79482:intron | 25.0% |
| ! | ATATTCGTATCCATATTCAA+GGG | - | chr3.4:79646345-79646364 | MS.gene79482:intron | 25.0% |
| ! | ATGATAATATGTAAACCTGA+CGG | + | chr3.4:79646095-79646114 | None:intergenic | 25.0% |
| ! | ATGTTAACATATTGCTTACA+GGG | - | chr3.4:79647483-79647502 | MS.gene79482:intron | 25.0% |
| ! | CGGATTCAAATTAAAAGTAA+AGG | + | chr3.4:79644799-79644818 | None:intergenic | 25.0% |
| ! | GAGCTTCAAATAAATGTTAA+TGG | - | chr3.4:79645024-79645043 | MS.gene79482:intron | 25.0% |
| ! | GATCATCATTAACAATAAGT+TGG | + | chr3.4:79647287-79647306 | None:intergenic | 25.0% |
| ! | GTCAAAAGTTAGTATTTAGA+AGG | - | chr3.4:79646931-79646950 | MS.gene79482:intron | 25.0% |
| ! | TAAAATTCATAACTTAGTCC+CGG | - | chr3.4:79647176-79647195 | MS.gene79482:intron | 25.0% |
| ! | TAAGTTGCACCTATTTATTT+AGG | - | chr3.4:79645510-79645529 | MS.gene79482:intron | 25.0% |
| ! | TAGACACAAAATTAACCTTA+CGG | + | chr3.4:79645699-79645718 | None:intergenic | 25.0% |
| ! | TATATTCGTATCCATATTCA+AGG | - | chr3.4:79646344-79646363 | MS.gene79482:intron | 25.0% |
| ! | TGAAAATTAACTCCATTTAG+AGG | - | chr3.4:79644290-79644309 | MS.gene79482:intron | 25.0% |
| ! | TGAAGTCCTTGAAAATTATA+TGG | - | chr3.4:79646752-79646771 | MS.gene79482:intron | 25.0% |
| ! | TTGATACATAAAACATACCT+GGG | + | chr3.4:79645439-79645458 | None:intergenic | 25.0% |
| !! | GTCCCAAATAAGAAAATTTT+AGG | - | chr3.4:79647012-79647031 | MS.gene79482:intron | 25.0% |
| !! | TTTTTCTGTAACCCTAATTT+CGG | + | chr3.4:79644459-79644478 | None:intergenic | 25.0% |
| !!! | AAAACACAGATTTTTCGATA+AGG | + | chr3.4:79644657-79644676 | None:intergenic | 25.0% |
| !!! | AATATTTTTGGCTTATAAGG+TGG | - | chr3.4:79646007-79646026 | MS.gene79482:intron | 25.0% |
| !!! | TATAATTTTCAAGGACTTCA+TGG | + | chr3.4:79646752-79646771 | None:intergenic | 25.0% |
| !!! | TATTGTTCTAAGGCTTTTAT+TGG | + | chr3.4:79644597-79644616 | None:intergenic | 25.0% |
| !!! | TATTTGTTGTTATTACCGTA+AGG | - | chr3.4:79645681-79645700 | MS.gene79482:intron | 25.0% |
| !!! | TCTTTTAAAAGGTCTAACTT+GGG | + | chr3.4:79646540-79646559 | None:intergenic | 25.0% |
| !!! | TTTTTCAGAAATTTGGACAT+TGG | - | chr3.4:79645487-79645506 | MS.gene79482:intron | 25.0% |
| !!! | TTTTTTTTTTGAACAAGGAG+AGG | - | chr3.4:79646858-79646877 | MS.gene79482:intron | 25.0% |
| AAACCATTTACAGCACATAT+TGG | + | chr3.4:79646284-79646303 | None:intergenic | 30.0% | |
| AAATATGTGTCCGTAAACAT+TGG | - | chr3.4:79647537-79647556 | MS.gene79482:CDS | 30.0% | |
| AATATGTGTCCGTAAACATT+GGG | - | chr3.4:79647538-79647557 | MS.gene79482:CDS | 30.0% | |
| AATTGGAATTGGAATTGCAA+TGG | + | chr3.4:79644772-79644791 | None:intergenic | 30.0% | |
| AATTTGAATCCGAATAAGAG+AGG | - | chr3.4:79644807-79644826 | MS.gene79482:intron | 30.0% | |
| ACAATATGGATATGTAGAGT+TGG | - | chr3.4:79647242-79647261 | MS.gene79482:intron | 30.0% | |
| AGAACAATACTAAAAGGCAA+GGG | - | chr3.4:79644608-79644627 | MS.gene79482:intron | 30.0% | |
| AGCCTTAGAACAATACTAAA+AGG | - | chr3.4:79644602-79644621 | MS.gene79482:intron | 30.0% | |
| AGGTTTACATATTATCATCG+AGG | - | chr3.4:79646097-79646116 | MS.gene79482:intron | 30.0% | |
| AGTTGCACCTATTTATTTAG+GGG | - | chr3.4:79645512-79645531 | MS.gene79482:intron | 30.0% | |
| ATAAATGTTAATGGTTGCAG+AGG | - | chr3.4:79645033-79645052 | MS.gene79482:intron | 30.0% | |
| ATCTTATATGCTGTGTAACT+TGG | - | chr3.4:79645730-79645749 | MS.gene79482:intron | 30.0% | |
| CAAACTACGAATATGGTTAT+TGG | - | chr3.4:79645082-79645101 | MS.gene79482:intron | 30.0% | |
| GACGAAACAATATTGCAATT+AGG | - | chr3.4:79644247-79644266 | MS.gene79482:intron | 30.0% | |
| GGAAACTGAAATACCATTAA+AGG | + | chr3.4:79647042-79647061 | None:intergenic | 30.0% | |
| GGATGATTCTACTAATGAAT+GGG | - | chr3.4:79645117-79645136 | MS.gene79482:intron | 30.0% | |
| GTAAAGGTTTGAATTGGAAT+TGG | + | chr3.4:79644783-79644802 | None:intergenic | 30.0% | |
| GTTGATACATAAAACATACC+TGG | + | chr3.4:79645440-79645459 | None:intergenic | 30.0% | |
| TAGAACAATACTAAAAGGCA+AGG | - | chr3.4:79644607-79644626 | MS.gene79482:intron | 30.0% | |
| TCTACATATCCATATTGTGT+TGG | + | chr3.4:79647240-79647259 | None:intergenic | 30.0% | |
| TGATACATAAAACATACCTG+GGG | + | chr3.4:79645438-79645457 | None:intergenic | 30.0% | |
| TGTCCTTATAAAAAGACTAG+AGG | - | chr3.4:79646396-79646415 | MS.gene79482:intron | 30.0% | |
| TGTTAACATATTGCTTACAG+GGG | - | chr3.4:79647484-79647503 | MS.gene79482:intron | 30.0% | |
| TTTCATAAGAGACTTCTAGA+AGG | + | chr3.4:79646315-79646334 | None:intergenic | 30.0% | |
| ! | ACTAGTCTAAATGAGACAAT+GGG | - | chr3.4:79646164-79646183 | MS.gene79482:intron | 30.0% |
| ! | GAGAAGCCATATAATTTTCA+AGG | + | chr3.4:79646761-79646780 | None:intergenic | 30.0% |
| ! | TAAATTTTATCATCACCCAC+CGG | + | chr3.4:79647198-79647217 | None:intergenic | 30.0% |
| ! | TGCCTTTTAGTATTGTTCTA+AGG | + | chr3.4:79644607-79644626 | None:intergenic | 30.0% |
| ! | TTCATAAGAGACTTCTAGAA+GGG | + | chr3.4:79646314-79646333 | None:intergenic | 30.0% |
| !! | CTTTTAAAAGGTCTAACTTG+GGG | + | chr3.4:79646539-79646558 | None:intergenic | 30.0% |
| !! | GTCTTTTAAAAGGTCTAACT+TGG | + | chr3.4:79646541-79646560 | None:intergenic | 30.0% |
| !! | TACTAACTTTTGACTGTTGT+TGG | + | chr3.4:79646925-79646944 | None:intergenic | 30.0% |
| !!! | AAGTACTTTTTCTTCTTGGA+TGG | - | chr3.4:79644323-79644342 | MS.gene79482:intron | 30.0% |
| !!! | AATTTTAGGCTAGCCTTTAA+TGG | - | chr3.4:79647026-79647045 | MS.gene79482:intron | 30.0% |
| AATACATACCCAACTGTTAG+GGG | - | chr3.4:79645330-79645349 | MS.gene79482:intron | 35.0% | |
| AATTAATCCGAGCCGAAATT+AGG | - | chr3.4:79644444-79644463 | MS.gene79482:intron | 35.0% | |
| ACATCTTCACTTACATTTGG+TGG | - | chr3.4:79647440-79647459 | MS.gene79482:intron | 35.0% | |
| ACTACGAATATGGTTATTGG+AGG | - | chr3.4:79645085-79645104 | MS.gene79482:intron | 35.0% | |
| AGAAGAACACCAACACAATA+TGG | - | chr3.4:79647228-79647247 | MS.gene79482:intron | 35.0% | |
| ATAAAACATACCTGGGGAAT+GGG | + | chr3.4:79645432-79645451 | None:intergenic | 35.0% | |
| ATAATATGTAAACCTGACGG+TGG | + | chr3.4:79646092-79646111 | None:intergenic | 35.0% | |
| ATTAATCCGAGCCGAAATTA+GGG | - | chr3.4:79644445-79644464 | MS.gene79482:intron | 35.0% | |
| CAGGAATAAACAACCTATAC+CGG | + | chr3.4:79644226-79644245 | None:intergenic | 35.0% | |
| CCTTATAAAAAGACTAGAGG+AGG | - | chr3.4:79646399-79646418 | MS.gene79482:intron | 35.0% | |
| CGGATGATTCTACTAATGAA+TGG | - | chr3.4:79645116-79645135 | MS.gene79482:intron | 35.0% | |
| CTAGTCTAAATGAGACAATG+GGG | - | chr3.4:79646165-79646184 | MS.gene79482:intron | 35.0% | |
| GAAGATGGAATTACCTGAAA+TGG | + | chr3.4:79644967-79644986 | None:intergenic | 35.0% | |
| GAATACATACCCAACTGTTA+GGG | - | chr3.4:79645329-79645348 | MS.gene79482:intron | 35.0% | |
| GATAGGACAAACTACGAATA+TGG | - | chr3.4:79645075-79645094 | MS.gene79482:intron | 35.0% | |
| GATCATAGGATTTCACACAA+TGG | - | chr3.4:79646230-79646249 | MS.gene79482:CDS | 35.0% | |
| GGTACATCTTCACTTACATT+TGG | - | chr3.4:79647437-79647456 | MS.gene79482:intron | 35.0% | |
| TATAAAAAGACTAGAGGAGG+AGG | - | chr3.4:79646402-79646421 | MS.gene79482:intron | 35.0% | |
| TGAAGAACGATAACACCATT+GGG | - | chr3.4:79644135-79644154 | MS.gene79482:CDS | 35.0% | |
| TGAATACATACCCAACTGTT+AGG | - | chr3.4:79645328-79645347 | MS.gene79482:intron | 35.0% | |
| TTCAAGGACTTCATGGAATT+TGG | + | chr3.4:79646745-79646764 | None:intergenic | 35.0% | |
| TTGCAATATTGTTTCGTCAC+AGG | + | chr3.4:79644245-79644264 | None:intergenic | 35.0% | |
| TTGCCAATATGTGCTGTAAA+TGG | - | chr3.4:79646278-79646297 | MS.gene79482:CDS | 35.0% | |
| ! | AAATTTTATCATCACCCACC+GGG | + | chr3.4:79647197-79647216 | None:intergenic | 35.0% |
| ! | ATGGGTTGCTTTAGACAAAA+AGG | - | chr3.4:79645135-79645154 | MS.gene79482:intron | 35.0% |
| ! | ATTGTGTTGGTGTTCTTCTA+CGG | + | chr3.4:79647227-79647246 | None:intergenic | 35.0% |
| ! | CACTAGTCTAAATGAGACAA+TGG | - | chr3.4:79646163-79646182 | MS.gene79482:intron | 35.0% |
| ! | CGGATTAATTTTCCGATGTA+CGG | + | chr3.4:79644434-79644453 | None:intergenic | 35.0% |
| ! | CTTTTCCTATAACAACTCGA+AGG | + | chr3.4:79647383-79647402 | None:intergenic | 35.0% |
| ! | TAATTTTCCGATGTACGGAT+CGG | + | chr3.4:79644429-79644448 | None:intergenic | 35.0% |
| ! | TCACTGTCTCGTCTTTTAAA+AGG | + | chr3.4:79646551-79646570 | None:intergenic | 35.0% |
| ! | TGACTTTAGAAGTCCAGTAT+AGG | - | chr3.4:79645909-79645928 | MS.gene79482:intron | 35.0% |
| !! | CCTCCTCTAGTCTTTTTATA+AGG | + | chr3.4:79646402-79646421 | None:intergenic | 35.0% |
| !! | CTGTTGTGTGTTACTTACAT+AGG | - | chr3.4:79645305-79645324 | MS.gene79482:intron | 35.0% |
| !! | GATTTCCTTCGAGTTGTTAT+AGG | - | chr3.4:79647375-79647394 | MS.gene79482:intron | 35.0% |
| AAAAGGTCTAACTTGGGGAT+GGG | + | chr3.4:79646534-79646553 | None:intergenic | 40.0% | |
| AACCATGAGTAGCTGCTTAA+AGG | + | chr3.4:79646260-79646279 | None:intergenic | 40.0% | |
| AACCTTTAAGCAGCTACTCA+TGG | - | chr3.4:79646255-79646274 | MS.gene79482:CDS | 40.0% | |
| AACGGAGAATTCCATTACCA+CGG | + | chr3.4:79644872-79644891 | None:intergenic | 40.0% | |
| AAGGACTTCATGGAATTTGG+AGG | + | chr3.4:79646742-79646761 | None:intergenic | 40.0% | |
| AAGTGGAGAAGCAAAAGATG+AGG | + | chr3.4:79646653-79646672 | None:intergenic | 40.0% | |
| AATTCATAACTTAGTCCCGG+TGG | - | chr3.4:79647179-79647198 | MS.gene79482:intron | 40.0% | |
| AATTCCATTACCACGGTGAA+AGG | + | chr3.4:79644865-79644884 | None:intergenic | 40.0% | |
| ACGTATCGTAACAGTTGTCA+AGG | - | chr3.4:79647142-79647161 | MS.gene79482:intron | 40.0% | |
| AGAAAAAAACAATGGCGTGC+AGG | - | chr3.4:79644716-79644735 | MS.gene79482:intron | 40.0% | |
| AGTACCTCAGTTAAATCCAC+CGG | - | chr3.4:79644204-79644223 | MS.gene79482:intron | 40.0% | |
| ATACATACCCAACTGTTAGG+GGG | - | chr3.4:79645331-79645350 | MS.gene79482:intron | 40.0% | |
| ATGCAATCTTAGAACCACCA+CGG | + | chr3.4:79645963-79645982 | None:intergenic | 40.0% | |
| ATTCATAACTTAGTCCCGGT+GGG | - | chr3.4:79647180-79647199 | MS.gene79482:intron | 40.0% | |
| ATTCCATTACCACGGTGAAA+GGG | + | chr3.4:79644864-79644883 | None:intergenic | 40.0% | |
| ATTGACGTGATGCTTATTGC+TGG | - | chr3.4:79645765-79645784 | MS.gene79482:intron | 40.0% | |
| CATAAAACATACCTGGGGAA+TGG | + | chr3.4:79645433-79645452 | None:intergenic | 40.0% | |
| CGAAAACCTCCTCTCTTATT+CGG | + | chr3.4:79644819-79644838 | None:intergenic | 40.0% | |
| CGGTGCAAAATTCCAAACAT+GGG | + | chr3.4:79647076-79647095 | None:intergenic | 40.0% | |
| CTAGAATGTCATCACCGTAA+CGG | + | chr3.4:79644168-79644187 | None:intergenic | 40.0% | |
| CTGAAGAACGATAACACCAT+TGG | - | chr3.4:79644134-79644153 | MS.gene79482:CDS | 40.0% | |
| GAATAAACAACCTATACCGG+TGG | + | chr3.4:79644223-79644242 | None:intergenic | 40.0% | |
| GATCAAATTGCAGCCTATAC+TGG | + | chr3.4:79645925-79645944 | None:intergenic | 40.0% | |
| TAAAAGGTCTAACTTGGGGA+TGG | + | chr3.4:79646535-79646554 | None:intergenic | 40.0% | |
| TAATGGAAAGATCAGTCACC+CGG | + | chr3.4:79646438-79646457 | None:intergenic | 40.0% | |
| TATCGTAACAGTTGTCAAGG+TGG | - | chr3.4:79647145-79647164 | MS.gene79482:intron | 40.0% | |
| TCAGTTAAATCCACCGGTAT+AGG | - | chr3.4:79644210-79644229 | MS.gene79482:intron | 40.0% | |
| TCGGTGCAAAATTCCAAACA+TGG | + | chr3.4:79647077-79647096 | None:intergenic | 40.0% | |
| TGCACCTATTTATTTAGGGG+CGG | - | chr3.4:79645515-79645534 | MS.gene79482:intron | 40.0% | |
| TTATGAAGGACGCTGATCAT+AGG | - | chr3.4:79646216-79646235 | MS.gene79482:intron | 40.0% | |
| TTATTCTCCGATCCGTACAT+CGG | - | chr3.4:79644419-79644438 | MS.gene79482:intron | 40.0% | |
| TTGAATCCGAATAAGAGAGG+AGG | - | chr3.4:79644810-79644829 | MS.gene79482:intron | 40.0% | |
| TTTGCTGCATCCCTTGAATA+TGG | + | chr3.4:79646358-79646377 | None:intergenic | 40.0% | |
| ! | AGGTATCTAAGACAGAAGGA+AGG | - | chr3.4:79645053-79645072 | MS.gene79482:intron | 40.0% |
| ! | CGATTTTGCAAAGAGAACAC+TGG | - | chr3.4:79644096-79644115 | MS.gene79482:CDS | 40.0% |
| ! | GCTTGACATAGTTTGTGGTT+TGG | + | chr3.4:79646070-79646089 | None:intergenic | 40.0% |
| ! | GGTAAAAAGCACATTCCTGT+TGG | + | chr3.4:79647104-79647123 | None:intergenic | 40.0% |
| ! | GTGTAGGTAGGAGTACATAA+TGG | + | chr3.4:79646455-79646474 | None:intergenic | 40.0% |
| ! | TATACCGGTGGATTTAACTG+AGG | + | chr3.4:79644211-79644230 | None:intergenic | 40.0% |
| ! | TCGTCTTTTCACGATGATCA+AGG | - | chr3.4:79644915-79644934 | MS.gene79482:intron | 40.0% |
| ! | TCTAAGACAGAAGGAAGGAT+AGG | - | chr3.4:79645058-79645077 | MS.gene79482:intron | 40.0% |
| !! | CAATGGTGTTATCGTTCTTC+AGG | + | chr3.4:79644136-79644155 | None:intergenic | 40.0% |
| !! | GAGACTTCTAGAAGGGATTT+TGG | + | chr3.4:79646307-79646326 | None:intergenic | 40.0% |
| !! | GTTTGGAATTTTGCACCGAA+TGG | - | chr3.4:79647078-79647097 | MS.gene79482:intron | 40.0% |
| AAAGACTAGAGGAGGAGGTT+TGG | - | chr3.4:79646407-79646426 | MS.gene79482:intron | 45.0% | |
| AACCCCGCCCCTAAATAAAT+AGG | + | chr3.4:79645522-79645541 | None:intergenic | 45.0% | |
| AATGGAAAGATCAGTCACCC+GGG | + | chr3.4:79646437-79646456 | None:intergenic | 45.0% | |
| ATGCTCGTACACACATTGAG+AGG | - | chr3.4:79646821-79646840 | MS.gene79482:intron | 45.0% | |
| CAAACATGGGACTCAGTGAA+AGG | + | chr3.4:79647063-79647082 | None:intergenic | 45.0% | |
| CACCTATTTATTTAGGGGCG+GGG | - | chr3.4:79645517-79645536 | MS.gene79482:intron | 45.0% | |
| CTCAGGACCTTGCATTATGA+AGG | - | chr3.4:79646202-79646221 | MS.gene79482:intron | 45.0% | |
| CTGTAACCCTAATTTCGGCT+CGG | + | chr3.4:79644454-79644473 | None:intergenic | 45.0% | |
| CTTTCACTGAGTCCCATGTT+TGG | - | chr3.4:79647061-79647080 | MS.gene79482:intron | 45.0% | |
| GCACCTATTTATTTAGGGGC+GGG | - | chr3.4:79645516-79645535 | MS.gene79482:intron | 45.0% | |
| GGAGAAGGCTAAAGACTGTT+GGG | + | chr3.4:79646513-79646532 | None:intergenic | 45.0% | |
| GGAGAATAACCGGGAAGATT+CGG | + | chr3.4:79644408-79644427 | None:intergenic | 45.0% | |
| GGTTATTGGAGGAACTGTCA+CGG | - | chr3.4:79645096-79645115 | MS.gene79482:intron | 45.0% | |
| GTGTATCGTTACGAGAGCAA+CGG | + | chr3.4:79644890-79644909 | None:intergenic | 45.0% | |
| TCAGCGTCCTTCATAATGCA+AGG | + | chr3.4:79646212-79646231 | None:intergenic | 45.0% | |
| TCATCGTGAAAAGACGACGA+CGG | + | chr3.4:79644912-79644931 | None:intergenic | 45.0% | |
| TCCTCAAGAAGCTGTGTTGA+AGG | - | chr3.4:79644941-79644960 | MS.gene79482:intron | 45.0% | |
| TCGAAGGAAATCACAGTGCA+TGG | + | chr3.4:79647367-79647386 | None:intergenic | 45.0% | |
| TGTACGGATCGGAGAATAAC+CGG | + | chr3.4:79644418-79644437 | None:intergenic | 45.0% | |
| TTCAACACAGCTTCTTGAGG+AGG | + | chr3.4:79644942-79644961 | None:intergenic | 45.0% | |
| TTCTCCACTTGCTCTCTAGA+TGG | - | chr3.4:79646663-79646682 | MS.gene79482:intron | 45.0% | |
| TTCTCTTTGCAAAATCGCCC+TGG | + | chr3.4:79644093-79644112 | None:intergenic | 45.0% | |
| ! | AAGCACAAGGTATCAGCAAG+GGG | - | chr3.4:79647513-79647532 | MS.gene79482:CDS | 45.0% |
| ! | GAAGCACAAGGTATCAGCAA+GGG | - | chr3.4:79647512-79647531 | MS.gene79482:CDS | 45.0% |
| ! | TGAAGCACAAGGTATCAGCA+AGG | - | chr3.4:79647511-79647530 | MS.gene79482:CDS | 45.0% |
| ! | TTTTCGCTGCAGAACCGTTA+AGG | - | chr3.4:79644833-79644852 | MS.gene79482:intron | 45.0% |
| !! | GCAGAGGTATCTAAGACAGA+AGG | - | chr3.4:79645049-79645068 | MS.gene79482:intron | 45.0% |
| !! | TTGGACTGGCCCAATGTTTA+CGG | + | chr3.4:79647550-79647569 | None:intergenic | 45.0% |
| AAAGACTGTTGGGAGAGTCC+AGG | + | chr3.4:79646503-79646522 | None:intergenic | 50.0% | |
| AACTATGTCAAGCCACCGTC+AGG | - | chr3.4:79646077-79646096 | MS.gene79482:intron | 50.0% | |
| AAGACTGTTGGGAGAGTCCA+GGG | + | chr3.4:79646502-79646521 | None:intergenic | 50.0% | |
| AGTGCATCCAACCTGATGTC+AGG | - | chr3.4:79646708-79646727 | MS.gene79482:intron | 50.0% | |
| CAGTGAACCCCCTAACAGTT+GGG | + | chr3.4:79645341-79645360 | None:intergenic | 50.0% | |
| CATTGGGAAGCTCACCGTTA+CGG | - | chr3.4:79644151-79644170 | MS.gene79482:intron | 50.0% | |
| CGGTGGCTTGACATAGTTTG+TGG | + | chr3.4:79646075-79646094 | None:intergenic | 50.0% | |
| CGTACTCTTCTGCACAAAGC+AGG | + | chr3.4:79647125-79647144 | None:intergenic | 50.0% | |
| GAGGTTAGAATCAGCTCCAC+CGG | + | chr3.4:79646634-79646653 | None:intergenic | 50.0% | |
| GCACATTCCTGTTGGCCATT+CGG | + | chr3.4:79647096-79647115 | None:intergenic | 50.0% | |
| GCCTTCAACACAGCTTCTTG+AGG | + | chr3.4:79644945-79644964 | None:intergenic | 50.0% | |
| GCTGTGTTGAAGGCCATTTC+AGG | - | chr3.4:79644951-79644970 | MS.gene79482:intron | 50.0% | |
| GCTTCGTTCAGCGATGATTG+TGG | - | chr3.4:79644744-79644763 | MS.gene79482:intron | 50.0% | |
| GGATGACTTCGTGCAAGCTA+TGG | - | chr3.4:79645377-79645396 | MS.gene79482:intron | 50.0% | |
| GGGAGAAGGCTAAAGACTGT+TGG | + | chr3.4:79646514-79646533 | None:intergenic | 50.0% | |
| GGGTTCACTGCAATAGGAAC+CGG | - | chr3.4:79645351-79645370 | MS.gene79482:intron | 50.0% | |
| GGTTCCATCTAGAGAGCAAG+TGG | + | chr3.4:79646670-79646689 | None:intergenic | 50.0% | |
| GTACGGATCGGAGAATAACC+GGG | + | chr3.4:79644417-79644436 | None:intergenic | 50.0% | |
| GTGAAAGGGACGAGCCTTAA+CGG | + | chr3.4:79644850-79644869 | None:intergenic | 50.0% | |
| GTTAGGGGGTTCACTGCAAT+AGG | - | chr3.4:79645345-79645364 | MS.gene79482:intron | 50.0% | |
| TCAAGGGATGCAGCAAAGTC+TGG | - | chr3.4:79646361-79646380 | MS.gene79482:intron | 50.0% | |
| TCACTGCAATAGGAACCGGT+GGG | - | chr3.4:79645355-79645374 | MS.gene79482:intron | 50.0% | |
| TCGCTGGAAACAACTTGGAC+TGG | + | chr3.4:79647564-79647583 | None:intergenic | 50.0% | |
| TCTAACTTGGGGATGGGAGA+AGG | + | chr3.4:79646528-79646547 | None:intergenic | 50.0% | |
| TGTGTACGAGCATGCGTAAG+CGG | + | chr3.4:79646814-79646833 | None:intergenic | 50.0% | |
| TTCACTGCAATAGGAACCGG+TGG | - | chr3.4:79645354-79645373 | MS.gene79482:intron | 50.0% | |
| ! | CATGGAATTTGGAGGCACAC+TGG | + | chr3.4:79646734-79646753 | None:intergenic | 50.0% |
| ! | GGGACTAGTAATCACGACTC+AGG | - | chr3.4:79646185-79646204 | MS.gene79482:intron | 50.0% |
| ! | TCTGCTCTTCTGAAAGCCGT+TGG | - | chr3.4:79644380-79644399 | MS.gene79482:intron | 50.0% |
| ! | TTTTGCACCGAATGGCCAAC+AGG | - | chr3.4:79647086-79647105 | MS.gene79482:intron | 50.0% |
| !! | TGACATCAGGTTGGATGCAC+TGG | + | chr3.4:79646709-79646728 | None:intergenic | 50.0% |
| AATCCAACAGCCCATTCCCC+AGG | - | chr3.4:79645419-79645438 | MS.gene79482:intron | 55.0% | |
| ACAGAACACTCCCGAGTCGT+CGG | - | chr3.4:79646588-79646607 | MS.gene79482:intron | 55.0% | |
| AGAGTCCATGTCCGTCTAGC+CGG | - | chr3.4:79646612-79646631 | MS.gene79482:intron | 55.0% | |
| ATGCGTAAGCGGGCATGTAC+AGG | + | chr3.4:79646803-79646822 | None:intergenic | 55.0% | |
| ATGGACTCTTCCGACGACTC+GGG | + | chr3.4:79646601-79646620 | None:intergenic | 55.0% | |
| CACGCACCAGCAACCAAAGT+CGG | - | chr3.4:79646472-79646491 | MS.gene79482:intron | 55.0% | |
| CACTGCAATAGGAACCGGTG+GGG | - | chr3.4:79645356-79645375 | MS.gene79482:intron | 55.0% | |
| CATGGACTCTTCCGACGACT+CGG | + | chr3.4:79646602-79646621 | None:intergenic | 55.0% | |
| CGTAACGGTGAGCTTCCCAA+TGG | + | chr3.4:79644153-79644172 | None:intergenic | 55.0% | |
| CGTCCCTTTCACCGTGGTAA+TGG | - | chr3.4:79644858-79644877 | MS.gene79482:intron | 55.0% | |
| CTTTGGTTGCTGGTGCGTGT+AGG | + | chr3.4:79646471-79646490 | None:intergenic | 55.0% | |
| GCAGTGAACCCCCTAACAGT+TGG | + | chr3.4:79645342-79645361 | None:intergenic | 55.0% | |
| GTGTACGAGCATGCGTAAGC+GGG | + | chr3.4:79646813-79646832 | None:intergenic | 55.0% | |
| TCTGCGTAGTTTAGCTGCCG+TGG | - | chr3.4:79645943-79645962 | MS.gene79482:intron | 55.0% | |
| TGGAACCTTCGTAGAGAGCC+TGG | - | chr3.4:79646683-79646702 | MS.gene79482:intron | 55.0% | |
| TTGCACGAAGTCATCCCCAC+CGG | + | chr3.4:79645373-79645392 | None:intergenic | 55.0% | |
| ! | AATCAGCTCCACCGGCTAGA+CGG | + | chr3.4:79646626-79646645 | None:intergenic | 55.0% |
| ! | ACACTGGCCTGACATCAGGT+TGG | + | chr3.4:79646718-79646737 | None:intergenic | 55.0% |
| ! | ACAGGGGAGTGTGAAGCACA+AGG | - | chr3.4:79647500-79647519 | MS.gene79482:CDS | 55.0% |
| !! | AGGAGGAGGTTTGGTTTGCC+CGG | - | chr3.4:79646416-79646435 | MS.gene79482:intron | 55.0% |
| !! | ATACCTGGGGAATGGGCTGT+TGG | + | chr3.4:79645425-79645444 | None:intergenic | 55.0% |
| AAGGCTCGTCCCTTTCACCG+TGG | - | chr3.4:79644852-79644871 | MS.gene79482:intron | 60.0% | |
| ACTGGCCAGGCTCTCTACGA+AGG | + | chr3.4:79646691-79646710 | None:intergenic | 60.0% | |
| ACTGTTGGGAGAGTCCAGGG+CGG | + | chr3.4:79646499-79646518 | None:intergenic | 60.0% | |
| CCGGGAAGATTCGGAGCCAA+CGG | + | chr3.4:79644399-79644418 | None:intergenic | 60.0% | |
| GCGTAGTTTAGCTGCCGTGG+TGG | - | chr3.4:79645946-79645965 | MS.gene79482:intron | 60.0% | |
| GGTTGCTGGTGCGTGTAGGT+AGG | + | chr3.4:79646467-79646486 | None:intergenic | 60.0% | |
| ! | AGGCACACTGGCCTGACATC+AGG | + | chr3.4:79646722-79646741 | None:intergenic | 60.0% |
| !! | CCGTTGGCTCCGAATCTTCC+CGG | - | chr3.4:79644396-79644415 | MS.gene79482:intron | 60.0% |
| !! | GGAGGAGGTTTGGTTTGCCC+GGG | - | chr3.4:79646417-79646436 | MS.gene79482:intron | 60.0% |
| !! | TCAGGTTGGATGCACTGGCC+AGG | + | chr3.4:79646704-79646723 | None:intergenic | 60.0% |
| AGTCCAGGGCGGTCCGACTT+TGG | + | chr3.4:79646488-79646507 | None:intergenic | 65.0% | |
| CAACCAAAGTCGGACCGCCC+TGG | - | chr3.4:79646482-79646501 | MS.gene79482:intron | 65.0% | |
| GGCGGTCCGACTTTGGTTGC+TGG | + | chr3.4:79646481-79646500 | None:intergenic | 65.0% | |
| GTCCATGTCCGTCTAGCCGG+TGG | - | chr3.4:79646615-79646634 | MS.gene79482:intron | 65.0% | |
| ! | CTCCACCGGCTAGACGGACA+TGG | + | chr3.4:79646620-79646639 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 79644077 | 79647587 | 79644077 | ID=MS.gene79482 |
| chr3.4 | mRNA | 79644077 | 79647587 | 79644077 | ID=MS.gene79482.t1;Parent=MS.gene79482 |
| chr3.4 | exon | 79647492 | 79647587 | 79647492 | ID=MS.gene79482.t1.exon1;Parent=MS.gene79482.t1 |
| chr3.4 | CDS | 79647492 | 79647587 | 79647492 | ID=cds.MS.gene79482.t1;Parent=MS.gene79482.t1 |
| chr3.4 | exon | 79646224 | 79646337 | 79646224 | ID=MS.gene79482.t1.exon2;Parent=MS.gene79482.t1 |
| chr3.4 | CDS | 79646224 | 79646337 | 79646224 | ID=cds.MS.gene79482.t1;Parent=MS.gene79482.t1 |
| chr3.4 | exon | 79644077 | 79644160 | 79644077 | ID=MS.gene79482.t1.exon3;Parent=MS.gene79482.t1 |
| chr3.4 | CDS | 79644077 | 79644160 | 79644077 | ID=cds.MS.gene79482.t1;Parent=MS.gene79482.t1 |
| Gene Sequence |
| Protein sequence |
