Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80413.t1 | XP_013451165.1 | 96.8 | 247 | 8 | 0 | 136 | 382 | 189 | 435 | 1.30E-138 | 503.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80413.t1 | Q43870 | 89.1 | 248 | 27 | 0 | 135 | 382 | 178 | 425 | 7.3e-133 | 475.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80413.t1 | G7ZV13 | 96.8 | 247 | 8 | 0 | 136 | 382 | 189 | 435 | 9.7e-139 | 503.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049351 | MS.gene80413 | 0.814751 | 1.31E-51 | -1.69E-46 |
| MS.gene049356 | MS.gene80413 | 0.827471 | 1.54E-54 | -1.69E-46 |
| MS.gene049369 | MS.gene80413 | 0.848702 | 5.18E-60 | -1.69E-46 |
| MS.gene049427 | MS.gene80413 | 0.809783 | 1.60E-50 | -1.69E-46 |
| MS.gene049491 | MS.gene80413 | 0.833099 | 6.48E-56 | -1.69E-46 |
| MS.gene049661 | MS.gene80413 | 0.83718 | 6.05E-57 | -1.69E-46 |
| MS.gene049662 | MS.gene80413 | 0.83347 | 5.24E-56 | -1.69E-46 |
| MS.gene049758 | MS.gene80413 | 0.8303 | 3.17E-55 | -1.69E-46 |
| MS.gene049805 | MS.gene80413 | 0.807918 | 4.00E-50 | -1.69E-46 |
| MS.gene049907 | MS.gene80413 | 0.836555 | 8.74E-57 | -1.69E-46 |
| MS.gene050076 | MS.gene80413 | 0.822127 | 2.80E-53 | -1.69E-46 |
| MS.gene050128 | MS.gene80413 | 0.808769 | 2.63E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene80413 | 0.851816 | 6.94E-61 | -1.69E-46 |
| MS.gene050397 | MS.gene80413 | 0.802423 | 5.65E-49 | -1.69E-46 |
| MS.gene050432 | MS.gene80413 | 0.837348 | 5.48E-57 | -1.69E-46 |
| MS.gene050670 | MS.gene80413 | 0.822706 | 2.05E-53 | -1.69E-46 |
| MS.gene050686 | MS.gene80413 | 0.805339 | 1.40E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene80413 | 0.848054 | 7.82E-60 | -1.69E-46 |
| MS.gene050770 | MS.gene80413 | 0.848833 | 4.76E-60 | -1.69E-46 |
| MS.gene05101 | MS.gene80413 | 0.831558 | 1.56E-55 | -1.69E-46 |
| MS.gene05105 | MS.gene80413 | 0.826036 | 3.38E-54 | -1.69E-46 |
| MS.gene051255 | MS.gene80413 | 0.812848 | 3.45E-51 | -1.69E-46 |
| MS.gene051360 | MS.gene80413 | 0.807958 | 3.92E-50 | -1.69E-46 |
| MS.gene051387 | MS.gene80413 | 0.82191 | 3.14E-53 | -1.69E-46 |
| MS.gene051692 | MS.gene80413 | 0.830877 | 2.29E-55 | -1.69E-46 |
| MS.gene051877 | MS.gene80413 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene052078 | MS.gene80413 | 0.817787 | 2.75E-52 | -1.69E-46 |
| MS.gene052188 | MS.gene80413 | 0.835294 | 1.83E-56 | -1.69E-46 |
| MS.gene052253 | MS.gene80413 | 0.827894 | 1.22E-54 | -1.69E-46 |
| MS.gene052271 | MS.gene80413 | 0.820853 | 5.51E-53 | -1.69E-46 |
| MS.gene052290 | MS.gene80413 | 0.801988 | 6.94E-49 | -1.69E-46 |
| MS.gene052310 | MS.gene80413 | 0.836917 | 7.06E-57 | -1.69E-46 |
| MS.gene052322 | MS.gene80413 | 0.819009 | 1.45E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene80413 | 0.843276 | 1.55E-58 | -1.69E-46 |
| MS.gene052340 | MS.gene80413 | 0.818369 | 2.03E-52 | -1.69E-46 |
| MS.gene052421 | MS.gene80413 | 0.83963 | 1.41E-57 | -1.69E-46 |
| MS.gene052484 | MS.gene80413 | 0.809275 | 2.05E-50 | -1.69E-46 |
| MS.gene052485 | MS.gene80413 | 0.854683 | 1.05E-61 | -1.69E-46 |
| MS.gene053103 | MS.gene80413 | 0.814427 | 1.55E-51 | -1.69E-46 |
| MS.gene053104 | MS.gene80413 | 0.801077 | 1.07E-48 | -1.69E-46 |
| MS.gene053209 | MS.gene80413 | 0.824503 | 7.79E-54 | -1.69E-46 |
| MS.gene053322 | MS.gene80413 | 0.837095 | 6.36E-57 | -1.69E-46 |
| MS.gene053449 | MS.gene80413 | 0.802935 | 4.43E-49 | -1.69E-46 |
| MS.gene053758 | MS.gene80413 | 0.807446 | 5.04E-50 | -1.69E-46 |
| MS.gene053813 | MS.gene80413 | 0.862682 | 4.26E-64 | -1.69E-46 |
| MS.gene053836 | MS.gene80413 | 0.819379 | 1.20E-52 | -1.69E-46 |
| MS.gene054123 | MS.gene80413 | 0.853656 | 2.07E-61 | -1.69E-46 |
| MS.gene054376 | MS.gene80413 | 0.841465 | 4.67E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene80413 | 0.800913 | 1.15E-48 | -1.69E-46 |
| MS.gene054803 | MS.gene80413 | 0.804122 | 2.51E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene80413 | 0.802933 | 4.43E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene80413 | 0.844046 | 9.63E-59 | -1.69E-46 |
| MS.gene055116 | MS.gene80413 | 0.833373 | 5.53E-56 | -1.69E-46 |
| MS.gene055277 | MS.gene80413 | 0.851771 | 7.14E-61 | -1.69E-46 |
| MS.gene055390 | MS.gene80413 | 0.815505 | 8.93E-52 | -1.69E-46 |
| MS.gene055397 | MS.gene80413 | 0.81868 | 1.73E-52 | -1.69E-46 |
| MS.gene055412 | MS.gene80413 | 0.828779 | 7.44E-55 | -1.69E-46 |
| MS.gene055422 | MS.gene80413 | 0.842722 | 2.17E-58 | -1.69E-46 |
| MS.gene055428 | MS.gene80413 | 0.818618 | 1.78E-52 | -1.69E-46 |
| MS.gene055499 | MS.gene80413 | 0.803269 | 3.78E-49 | -1.69E-46 |
| MS.gene055633 | MS.gene80413 | 0.816045 | 6.77E-52 | -1.69E-46 |
| MS.gene055647 | MS.gene80413 | 0.8265 | 2.62E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene80413 | 0.812067 | 5.11E-51 | -1.69E-46 |
| MS.gene05592 | MS.gene80413 | 0.848824 | 4.79E-60 | -1.69E-46 |
| MS.gene056191 | MS.gene80413 | 0.842992 | 1.84E-58 | -1.69E-46 |
| MS.gene056407 | MS.gene80413 | 0.822375 | 2.45E-53 | -1.69E-46 |
| MS.gene056410 | MS.gene80413 | 0.819037 | 1.43E-52 | -1.69E-46 |
| MS.gene056422 | MS.gene80413 | 0.801377 | 9.27E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene80413 | 0.823562 | 1.30E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene80413 | 0.833142 | 6.32E-56 | -1.69E-46 |
| MS.gene056897 | MS.gene80413 | 0.805145 | 1.54E-49 | -1.69E-46 |
| MS.gene056931 | MS.gene80413 | 0.82033 | 7.26E-53 | -1.69E-46 |
| MS.gene056933 | MS.gene80413 | 0.81653 | 5.27E-52 | -1.69E-46 |
| MS.gene056935 | MS.gene80413 | 0.807911 | 4.01E-50 | -1.69E-46 |
| MS.gene057011 | MS.gene80413 | 0.816151 | 6.41E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene80413 | 0.803534 | 3.33E-49 | -1.69E-46 |
| MS.gene057123 | MS.gene80413 | 0.816235 | 6.14E-52 | -1.69E-46 |
| MS.gene057129 | MS.gene80413 | 0.826497 | 2.63E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene80413 | 0.807357 | 5.26E-50 | -1.69E-46 |
| MS.gene057285 | MS.gene80413 | 0.800322 | 1.52E-48 | -1.69E-46 |
| MS.gene05733 | MS.gene80413 | 0.813515 | 2.46E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene80413 | 0.812149 | 4.90E-51 | -1.69E-46 |
| MS.gene057448 | MS.gene80413 | 0.804147 | 2.48E-49 | -1.69E-46 |
| MS.gene057449 | MS.gene80413 | 0.803533 | 3.33E-49 | -1.69E-46 |
| MS.gene057450 | MS.gene80413 | 0.81603 | 6.82E-52 | -1.69E-46 |
| MS.gene057749 | MS.gene80413 | 0.800645 | 1.31E-48 | -1.69E-46 |
| MS.gene057823 | MS.gene80413 | 0.804579 | 2.02E-49 | -1.69E-46 |
| MS.gene057926 | MS.gene80413 | 0.807721 | 4.40E-50 | -1.69E-46 |
| MS.gene058002 | MS.gene80413 | 0.803292 | 3.74E-49 | -1.69E-46 |
| MS.gene05806 | MS.gene80413 | 0.803486 | 3.41E-49 | -1.69E-46 |
| MS.gene05811 | MS.gene80413 | 0.818706 | 1.70E-52 | -1.69E-46 |
| MS.gene058293 | MS.gene80413 | 0.837124 | 6.25E-57 | -1.69E-46 |
| MS.gene058365 | MS.gene80413 | 0.805549 | 1.27E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene80413 | 0.868808 | 4.96E-66 | -1.69E-46 |
| MS.gene058928 | MS.gene80413 | 0.822742 | 2.01E-53 | -1.69E-46 |
| MS.gene058995 | MS.gene80413 | 0.818146 | 2.28E-52 | -1.69E-46 |
| MS.gene05907 | MS.gene80413 | 0.848607 | 5.50E-60 | -1.69E-46 |
| MS.gene059366 | MS.gene80413 | 0.803466 | 3.44E-49 | -1.69E-46 |
| MS.gene059536 | MS.gene80413 | 0.821881 | 3.19E-53 | -1.69E-46 |
| MS.gene059597 | MS.gene80413 | 0.856592 | 2.90E-62 | -1.69E-46 |
| MS.gene05959 | MS.gene80413 | 0.800489 | 1.41E-48 | -1.69E-46 |
| MS.gene059676 | MS.gene80413 | 0.847115 | 1.42E-59 | -1.69E-46 |
| MS.gene059688 | MS.gene80413 | 0.876541 | 1.29E-68 | -1.69E-46 |
| MS.gene059692 | MS.gene80413 | 0.882695 | 8.40E-71 | -1.69E-46 |
| MS.gene059695 | MS.gene80413 | 0.880049 | 7.56E-70 | -1.69E-46 |
| MS.gene059711 | MS.gene80413 | 0.879085 | 1.66E-69 | -1.69E-46 |
| MS.gene059807 | MS.gene80413 | 0.828995 | 6.59E-55 | -1.69E-46 |
| MS.gene05984 | MS.gene80413 | 0.804794 | 1.82E-49 | -1.69E-46 |
| MS.gene059960 | MS.gene80413 | 0.812036 | 5.19E-51 | -1.69E-46 |
| MS.gene059974 | MS.gene80413 | 0.826852 | 2.16E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene80413 | 0.81146 | 6.92E-51 | -1.69E-46 |
| MS.gene060356 | MS.gene80413 | 0.808163 | 3.55E-50 | -1.69E-46 |
| MS.gene06037 | MS.gene80413 | 0.838604 | 2.61E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene80413 | 0.815321 | 9.82E-52 | -1.69E-46 |
| MS.gene060559 | MS.gene80413 | 0.816933 | 4.28E-52 | -1.69E-46 |
| MS.gene060569 | MS.gene80413 | 0.815164 | 1.06E-51 | -1.69E-46 |
| MS.gene060804 | MS.gene80413 | 0.849993 | 2.26E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene80413 | 0.841398 | 4.87E-58 | -1.69E-46 |
| MS.gene060837 | MS.gene80413 | 0.870102 | 1.88E-66 | -1.69E-46 |
| MS.gene061041 | MS.gene80413 | 0.819628 | 1.05E-52 | -1.69E-46 |
| MS.gene061049 | MS.gene80413 | 0.838432 | 2.89E-57 | -1.69E-46 |
| MS.gene061051 | MS.gene80413 | -0.84726 | 1.29E-59 | -1.69E-46 |
| MS.gene061200 | MS.gene80413 | 0.839447 | 1.58E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80413.t1 | MTR_6g016335 | 96.761 | 247 | 8 | 0 | 136 | 382 | 189 | 435 | 4.15e-177 | 504 |
| MS.gene80413.t1 | MTR_1g102550 | 82.996 | 247 | 42 | 0 | 136 | 382 | 167 | 413 | 5.29e-152 | 439 |
| MS.gene80413.t1 | MTR_6g016320 | 96.774 | 62 | 2 | 0 | 272 | 333 | 11 | 72 | 2.49e-37 | 131 |
| MS.gene80413.t1 | MTR_6g016325 | 94.118 | 51 | 3 | 0 | 332 | 382 | 30 | 80 | 5.53e-26 | 102 |
| MS.gene80413.t1 | MTR_3g028680 | 81.818 | 44 | 8 | 0 | 393 | 436 | 85 | 128 | 3.44e-14 | 71.2 |
| MS.gene80413.t1 | MTR_2g067090 | 81.818 | 44 | 8 | 0 | 393 | 436 | 180 | 223 | 9.72e-14 | 72.0 |
| MS.gene80413.t1 | MTR_0337s0060 | 78.571 | 42 | 9 | 0 | 395 | 436 | 181 | 222 | 1.53e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene80413.t1 | AT1G19920 | 89.113 | 248 | 27 | 0 | 135 | 382 | 178 | 425 | 2.20e-166 | 476 |
| MS.gene80413.t1 | AT3G22890 | 82.996 | 247 | 42 | 0 | 136 | 382 | 165 | 411 | 4.96e-152 | 439 |
| MS.gene80413.t1 | AT4G14680 | 82.591 | 247 | 43 | 0 | 136 | 382 | 167 | 413 | 6.12e-150 | 434 |
| MS.gene80413.t1 | AT5G43780 | 82.591 | 247 | 43 | 0 | 136 | 382 | 169 | 415 | 9.49e-150 | 434 |
| MS.gene80413.t1 | AT4G14680 | 82.591 | 247 | 43 | 0 | 136 | 382 | 167 | 413 | 2.08e-149 | 434 |
Find 122 sgRNAs with CRISPR-Local
Find 426 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTTGCGATTTGCGATTA+TGG | 0.167131 | 6.3:+29304220 | MS.gene80413:CDS |
| CCAGCTGGAAATTGGCTTAT+TGG | 0.205900 | 6.3:+29305531 | MS.gene80413:CDS |
| TGCTTGCGATTTGCGATTAT+GGG | 0.226715 | 6.3:+29304221 | MS.gene80413:CDS |
| CTGCAATCAGATTGTGGGTT+AGG | 0.237196 | 6.3:-29304064 | None:intergenic |
| TTTCCATCGCCTATGCATTA+TGG | 0.257310 | 6.3:+29307512 | MS.gene80413:CDS |
| AGAGGATGAAGCAATAAAAT+TGG | 0.269794 | 6.3:-29305759 | None:intergenic |
| TCATTGCTCCAGCTGGAAAT+TGG | 0.285849 | 6.3:+29305523 | MS.gene80413:CDS |
| TTAACAAGGCATGACCATTA+TGG | 0.305379 | 6.3:-29305692 | None:intergenic |
| TTGGCTTATTGGAGGAGATT+TGG | 0.324311 | 6.3:+29305542 | MS.gene80413:CDS |
| GAATTCTTCACGAAGTTGTT+TGG | 0.332061 | 6.3:-29305619 | None:intergenic |
| GATCAAGAACTCCATCTTCT+AGG | 0.341116 | 6.3:-29307466 | None:intergenic |
| ATTATGGGTTCTCTTTGTTC+AGG | 0.355884 | 6.3:+29304236 | MS.gene80413:CDS |
| CGTGACGTAGCCGGTGAAAT+TGG | 0.362757 | 6.3:-29304117 | None:intergenic |
| CGCCTTTCAGTTAAGAAATC+CGG | 0.363354 | 6.3:+29305668 | MS.gene80413:CDS |
| AGACCATCATTGTATTTGAT+AGG | 0.381497 | 6.3:-29305576 | None:intergenic |
| AATTCTTCACGAAGTTGTTT+GGG | 0.383556 | 6.3:-29305618 | None:intergenic |
| TGCAATCAGATTGTGGGTTA+GGG | 0.385479 | 6.3:-29304063 | None:intergenic |
| GCAAGTTTCGCCGGTGAAAT+CGG | 0.385662 | 6.3:-29304151 | None:intergenic |
| AAGATTGTGGGGACTGATTG+TGG | 0.394457 | 6.3:-29303919 | None:intergenic |
| CACCGGCGAAACTTGCTTCA+CGG | 0.414743 | 6.3:+29304158 | MS.gene80413:CDS |
| TCCTCAACGTAAGGCAATCC+TGG | 0.418206 | 6.3:-29305498 | None:intergenic |
| ACGATGTTCCGTTAGATGTC+AGG | 0.428955 | 6.3:+29305802 | MS.gene80413:CDS |
| CCCAAGCATTGTTGTTGACT+GGG | 0.432449 | 6.3:-29302330 | None:intergenic |
| GCCCAAGCATTGTTGTTGAC+TGG | 0.432990 | 6.3:-29302331 | None:intergenic |
| GGCGCCAACTTCTATATTGT+TGG | 0.437597 | 6.3:+29307581 | MS.gene80413:CDS |
| ATAGAAACAATGGTTGTCTC+TGG | 0.438582 | 6.3:-29307488 | None:intergenic |
| TTATTGCTTCATCCTCTTGG+AGG | 0.441232 | 6.3:+29305765 | MS.gene80413:CDS |
| GGAACGTTCGCCGATGAAAT+CGG | 0.443912 | 6.3:-29304025 | None:intergenic |
| CTACACGGTGTTCTTGAAGC+TGG | 0.449082 | 6.3:+29308271 | MS.gene80413:CDS |
| GCATGCCATTGTACTTCAGT+TGG | 0.450436 | 6.3:-29307539 | None:intergenic |
| GGGTCATCCAACTGAGAAAC+GGG | 0.451624 | 6.3:+29307622 | MS.gene80413:CDS |
| CAATCCCGCCGTGAATCAAC+CGG | 0.451670 | 6.3:-29304000 | None:intergenic |
| TGTTCATAGGTCCTAGAAGA+TGG | 0.456208 | 6.3:+29307455 | MS.gene80413:intron |
| TGGTCGTGATCCCGCTGGTA+TGG | 0.458956 | 6.3:+29307601 | MS.gene80413:CDS |
| ACCCAGTCAACAACAATGCT+TGG | 0.459975 | 6.3:+29302329 | MS.gene80413:CDS |
| TCCTGGAGCAGTTGTTCCCC+AGG | 0.464917 | 6.3:-29305481 | None:intergenic |
| GGAAAATGACGTCGAAGTTA+CGG | 0.471535 | 6.3:-29303979 | None:intergenic |
| TACACGGTGTTCTTGAAGCT+GGG | 0.478647 | 6.3:+29308272 | MS.gene80413:CDS |
| GGTTTCTGCAATCAGATTGT+GGG | 0.486333 | 6.3:-29304069 | None:intergenic |
| GACTTGTATGACCCTGATCA+TGG | 0.490265 | 6.3:+29307644 | MS.gene80413:CDS |
| TACAAGTCCCGTTTCTCAGT+TGG | 0.492506 | 6.3:-29307629 | None:intergenic |
| GCAATACTACATACCCTGAA+TGG | 0.493645 | 6.3:-29307716 | None:intergenic |
| CGGGATTGCGCCGATTTCAT+CGG | 0.496049 | 6.3:+29304015 | MS.gene80413:CDS |
| TGAAAGAGATTAAGAATGGT+AGG | 0.496076 | 6.3:+29302218 | None:intergenic |
| AGATTGTGGGGACTGATTGT+GGG | 0.496647 | 6.3:-29303918 | None:intergenic |
| TGGGTCATCCAACTGAGAAA+CGG | 0.499633 | 6.3:+29307621 | MS.gene80413:CDS |
| TTAGACGGTGTCACGGAAGA+TGG | 0.500357 | 6.3:-29308340 | None:intergenic |
| GGTCGTGATCCCGCTGGTAT+GGG | 0.500528 | 6.3:+29307602 | MS.gene80413:CDS |
| CCCAGTCAACAACAATGCTT+GGG | 0.502438 | 6.3:+29302330 | MS.gene80413:CDS |
| ACCTGGGGAACAACTGCTCC+AGG | 0.502578 | 6.3:+29305480 | MS.gene80413:CDS |
| AGGTTTCTGCAATCAGATTG+TGG | 0.505919 | 6.3:-29304070 | None:intergenic |
| AAACCTATCAAATACAATGA+TGG | 0.508307 | 6.3:+29305573 | MS.gene80413:CDS |
| AAGAAAGAATAGCTAGAACC+TGG | 0.509563 | 6.3:+29305463 | MS.gene80413:CDS |
| TTAAGAAATCCGGTCCATAA+TGG | 0.512744 | 6.3:+29305678 | MS.gene80413:CDS |
| GCAAAGGCACGGATAAATGC+AGG | 0.515091 | 6.3:+29307560 | MS.gene80413:CDS |
| CGTGATTGCGCCGATTTCAC+CGG | 0.516870 | 6.3:+29304141 | MS.gene80413:CDS |
| GGGACTGATTGTGGGGTCTG+AGG | 0.521681 | 6.3:-29303910 | None:intergenic |
| CAATCACGCCGTGACGTAGC+CGG | 0.523322 | 6.3:-29304126 | None:intergenic |
| GCTGGAAATTGGCTTATTGG+AGG | 0.523653 | 6.3:+29305534 | MS.gene80413:CDS |
| TGAAATTGGAGTCGCGAAAA+CGG | 0.524650 | 6.3:-29304103 | None:intergenic |
| TGCCTCCGGATCTATGCCTC+CGG | 0.527349 | 6.3:-29308236 | None:intergenic |
| ATGATGGTCTTGATAACTAC+AGG | 0.527746 | 6.3:+29305589 | MS.gene80413:CDS |
| ATGAGGTAGGAGAAGATTGT+GGG | 0.528740 | 6.3:-29303931 | None:intergenic |
| TATGAGGTAGGAGAAGATTG+TGG | 0.529817 | 6.3:-29303932 | None:intergenic |
| TTTGCTACAAACTTTGTCCC+CGG | 0.533917 | 6.3:+29302355 | MS.gene80413:CDS |
| AGAAAGAATAGCTAGAACCT+GGG | 0.539463 | 6.3:+29305464 | MS.gene80413:CDS |
| ATTGTTGGTCGTGATCCCGC+TGG | 0.541652 | 6.3:+29307596 | MS.gene80413:CDS |
| GAGGAGGTCATTGCTCCAGC+TGG | 0.544655 | 6.3:+29305516 | MS.gene80413:CDS |
| TCCAGGATTGCCTTACGTTG+AGG | 0.546081 | 6.3:+29305497 | MS.gene80413:CDS |
| TGCTCCATCCTGACATCTAA+CGG | 0.548586 | 6.3:-29305810 | None:intergenic |
| ATGTTAAGCTTCTCGAGACC+AGG | 0.548984 | 6.3:-29307689 | None:intergenic |
| GTTACGGTGGCGCGCGAGCA+AGG | 0.551114 | 6.3:-29303963 | None:intergenic |
| GAGCAAGGTTGAGTCGTATG+AGG | 0.551138 | 6.3:-29303948 | None:intergenic |
| ACGACCAACAATATAGAAGT+TGG | 0.551325 | 6.3:-29307585 | None:intergenic |
| CATAATCGCAAATCGCAAGC+AGG | 0.553769 | 6.3:-29304219 | None:intergenic |
| AAGGTGCTTAGCATGGCTCC+TGG | 0.555425 | 6.3:+29307671 | MS.gene80413:CDS |
| CCAATAAGCCAATTTCCAGC+TGG | 0.563923 | 6.3:-29305531 | None:intergenic |
| TAGACGGTGTCACGGAAGAT+GGG | 0.567850 | 6.3:-29308339 | None:intergenic |
| AACCGTGAAGCAAGTTTCGC+CGG | 0.568071 | 6.3:-29304160 | None:intergenic |
| TTAGGGTGGCACAAAGGTGA+AGG | 0.568889 | 6.3:-29304046 | None:intergenic |
| GACCGGATTTCTTAACTGAA+AGG | 0.569641 | 6.3:-29305670 | None:intergenic |
| TAGATCCGGAGGCATAGATC+CGG | 0.577743 | 6.3:+29308231 | MS.gene80413:CDS |
| ACGAGTATCGTTCATTAACA+AGG | 0.579648 | 6.3:-29305706 | None:intergenic |
| CCATCGCCTATGCATTATGG+AGG | 0.579857 | 6.3:+29307515 | MS.gene80413:CDS |
| AGAAAGCTTTAGCACGGCTA+GGG | 0.581287 | 6.3:-29308195 | None:intergenic |
| TAGAAAGCTTTAGCACGGCT+AGG | 0.584667 | 6.3:-29308196 | None:intergenic |
| TTTCGCGACTCCAATTTCAC+CGG | 0.586844 | 6.3:+29304107 | MS.gene80413:CDS |
| AAGGTTGAGTCGTATGAGGT+AGG | 0.591096 | 6.3:-29303944 | None:intergenic |
| GCGAAAACGGAGAAAGAATG+AGG | 0.595928 | 6.3:-29304090 | None:intergenic |
| TGACACTAAGGTAAACAAGA+TGG | 0.598361 | 6.3:+29308162 | MS.gene80413:CDS |
| GTTGGATGACCCATACCAGC+GGG | 0.598608 | 6.3:-29307611 | None:intergenic |
| TCGTCAACATATATTAGACA+TGG | 0.599359 | 6.3:+29305725 | MS.gene80413:CDS |
| TACAATGGCATGCAAAGGCA+CGG | 0.599759 | 6.3:+29307549 | MS.gene80413:CDS |
| CGATGGAAATATAGAAACAA+TGG | 0.600676 | 6.3:-29307498 | None:intergenic |
| CAATTTCACCGGCTACGTCA+CGG | 0.603105 | 6.3:+29304118 | MS.gene80413:CDS |
| GCAATGACCTCCTCAACGTA+AGG | 0.607325 | 6.3:-29305507 | None:intergenic |
| GGTGGCAGCTTATGACACTA+AGG | 0.610562 | 6.3:+29308150 | MS.gene80413:intron |
| AAGGCATGACCATTATGGAC+CGG | 0.612091 | 6.3:-29305687 | None:intergenic |
| CCTCCATAATGCATAGGCGA+TGG | 0.613820 | 6.3:-29307515 | None:intergenic |
| AATCAGATTGTGGGTTAGGG+TGG | 0.618459 | 6.3:-29304060 | None:intergenic |
| GTTGGCCCTCCATAATGCAT+AGG | 0.625317 | 6.3:-29307521 | None:intergenic |
| AGGATTGCCTTACGTTGAGG+AGG | 0.626411 | 6.3:+29305500 | MS.gene80413:CDS |
| GATTGTGGGGACTGATTGTG+GGG | 0.628124 | 6.3:-29303917 | None:intergenic |
| ATCCGGAGGCATAGATCCGG+AGG | 0.628489 | 6.3:+29308234 | MS.gene80413:CDS |
| TGAAGACTTAGACGGTGTCA+CGG | 0.631886 | 6.3:-29308347 | None:intergenic |
| CATCGCCTATGCATTATGGA+GGG | 0.632349 | 6.3:+29307516 | MS.gene80413:CDS |
| GAAAGAATAGCTAGAACCTG+GGG | 0.638025 | 6.3:+29305465 | MS.gene80413:CDS |
| TGAAGTACAATGGCATGCAA+AGG | 0.640356 | 6.3:+29307544 | MS.gene80413:CDS |
| CAGGATGGAGCAATATAGCA+AGG | 0.646155 | 6.3:+29305821 | MS.gene80413:CDS |
| AACTTCGTGAAGAATTCGAT+AGG | 0.647589 | 6.3:+29305625 | MS.gene80413:CDS |
| ACGTGTAGAAAGCTTTAGCA+CGG | 0.651162 | 6.3:-29308201 | None:intergenic |
| CGTCAACATATATTAGACAT+GGG | 0.655843 | 6.3:+29305726 | MS.gene80413:CDS |
| TCCTCTTGGAGGTTTCACAA+AGG | 0.657993 | 6.3:+29305776 | MS.gene80413:CDS |
| GAGGGCCAACTGAAGTACAA+TGG | 0.672333 | 6.3:+29307534 | MS.gene80413:CDS |
| TGTTCCGTTAGATGTCAGGA+TGG | 0.672939 | 6.3:+29305806 | MS.gene80413:CDS |
| TGTGGGTTAGGGTGGCACAA+AGG | 0.673155 | 6.3:-29304052 | None:intergenic |
| TGAAGCTGGGAAAACAGCAG+AGG | 0.686386 | 6.3:+29308285 | MS.gene80413:CDS |
| ACCTTTGTGAAACCTCCAAG+AGG | 0.706301 | 6.3:-29305777 | None:intergenic |
| TGAGGTAGGAGAAGATTGTG+GGG | 0.712325 | 6.3:-29303930 | None:intergenic |
| AGTTGGATGACCCATACCAG+CGG | 0.716912 | 6.3:-29307612 | None:intergenic |
| AAATGACGTCGAAGTTACGG+TGG | 0.733097 | 6.3:-29303976 | None:intergenic |
| GAAGAGAAGTAAGTAAAACG+AGG | 0.735482 | 6.3:-29304197 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATCTTAAATATTCAATAA+TGG | + | chr6.3:29306869-29306888 | MS.gene80413:intron | 10.0% |
| !! | AATCTTAAATATTCAATAAT+GGG | + | chr6.3:29306870-29306889 | MS.gene80413:intron | 10.0% |
| !! | ATATAAAGTAAAAAAAAAAC+AGG | + | chr6.3:29306426-29306445 | MS.gene80413:intron | 10.0% |
| !! | TTCTATATATATATATAGAA+TGG | + | chr6.3:29306454-29306473 | MS.gene80413:intron | 10.0% |
| !!! | TTTTAAACATTGATTATTAT+AGG | - | chr6.3:29306089-29306108 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTAATTACCA+TGG | + | chr6.3:29303409-29303428 | MS.gene80413:intron | 10.0% |
| !! | AATGTGAATTACATATTATA+TGG | + | chr6.3:29302476-29302495 | MS.gene80413:intron | 15.0% |
| !! | ACAATATAAAGAATAAAAGA+CGG | - | chr6.3:29306295-29306314 | None:intergenic | 15.0% |
| !! | ATAAAAGAATTACAAATGAA+CGG | - | chr6.3:29306156-29306175 | None:intergenic | 15.0% |
| !! | CGAATAATTTAATTATATTC+CGG | + | chr6.3:29306265-29306284 | MS.gene80413:intron | 15.0% |
| !! | TAGTATTAAAACAAAGAAAT+GGG | + | chr6.3:29306935-29306954 | MS.gene80413:intron | 15.0% |
| !! | TGAAAATTATTATTGACAAA+TGG | - | chr6.3:29308731-29308750 | None:intergenic | 15.0% |
| !! | TTAGTATTAAAACAAAGAAA+TGG | + | chr6.3:29306934-29306953 | MS.gene80413:intron | 15.0% |
| !!! | CTTTTATTTTATTTAGCATT+TGG | + | chr6.3:29308756-29308775 | MS.gene80413:intron | 15.0% |
| !!! | TCAAATTCACATATAATTTT+TGG | - | chr6.3:29302407-29302426 | None:intergenic | 15.0% |
| !!! | TCATAAATAATTTTTTGTGA+TGG | - | chr6.3:29306731-29306750 | None:intergenic | 15.0% |
| !!! | TGAAATTTTGTACAAAAAAA+TGG | - | chr6.3:29307960-29307979 | None:intergenic | 15.0% |
| !! | AAATCATTAGACAATTAGTT+TGG | + | chr6.3:29308637-29308656 | MS.gene80413:intron | 20.0% |
| !! | AAGCTTATGATTAAAGTTAT+TGG | - | chr6.3:29302653-29302672 | None:intergenic | 20.0% |
| !! | AATGAAAAATCATAATCACT+TGG | + | chr6.3:29302575-29302594 | MS.gene80413:intron | 20.0% |
| !! | AATGTTTAAAAAATTGACCT+TGG | + | chr6.3:29306098-29306117 | MS.gene80413:intron | 20.0% |
| !! | AATTCTTGTATATATACCAT+AGG | + | chr6.3:29302606-29302625 | MS.gene80413:intron | 20.0% |
| !! | ATATATAGAATGGAAAAATG+TGG | + | chr6.3:29306464-29306483 | MS.gene80413:intron | 20.0% |
| !! | ATGTTAAAAAATGAACAAGA+TGG | - | chr6.3:29305306-29305325 | None:intergenic | 20.0% |
| !! | ATTAAAAACAGAGAATAGAT+AGG | - | chr6.3:29306337-29306356 | None:intergenic | 20.0% |
| !! | CATAATAACAAAAATTCCTA+TGG | - | chr6.3:29302625-29302644 | None:intergenic | 20.0% |
| !! | GAAAAAAGAAGAAAAAGAAA+AGG | + | chr6.3:29303690-29303709 | MS.gene80413:intron | 20.0% |
| !! | GTTCAATTTATGATATCTAA+TGG | + | chr6.3:29304725-29304744 | MS.gene80413:intron | 20.0% |
| !! | TATTAATGAAACCATAAGTA+TGG | - | chr6.3:29308694-29308713 | None:intergenic | 20.0% |
| !! | TTCGATAAGAATATTATTCT+TGG | - | chr6.3:29306208-29306227 | None:intergenic | 20.0% |
| !!! | AAATTCTTTTTCTTGTTCAT+AGG | + | chr6.3:29307442-29307461 | MS.gene80413:intron | 20.0% |
| !!! | ATTTTGGAGGAAATAATTTA+CGG | - | chr6.3:29302762-29302781 | None:intergenic | 20.0% |
| !!! | CTACTTAAAATTTTGTTGAT+AGG | + | chr6.3:29308078-29308097 | MS.gene80413:intron | 20.0% |
| !!! | GAATCAATTTTGTTTAATAC+CGG | + | chr6.3:29305882-29305901 | MS.gene80413:intron | 20.0% |
| !!! | TGAAGCTTTAAAAAAAAAAG+TGG | + | chr6.3:29308537-29308556 | MS.gene80413:intron | 20.0% |
| !!! | TGTTATGTATTGATGATTAT+AGG | + | chr6.3:29308606-29308625 | MS.gene80413:intron | 20.0% |
| !!! | TGTTTTTGTGAAATATCTAT+TGG | + | chr6.3:29302442-29302461 | MS.gene80413:intron | 20.0% |
| !!! | TTAAAATTTTGTTGATAGGT+TGG | + | chr6.3:29308082-29308101 | MS.gene80413:intron | 20.0% |
| !!! | TTATTTTTTTTCTCACTTTC+CGG | - | chr6.3:29302377-29302396 | None:intergenic | 20.0% |
| !!! | TTGAGATGAATTGTAAATTT+TGG | - | chr6.3:29307238-29307257 | None:intergenic | 20.0% |
| ! | AAAAGTCTTTACAATGACAA+TGG | + | chr6.3:29306498-29306517 | MS.gene80413:intron | 25.0% |
| ! | AAACCATAAGTATGGTTTAA+TGG | - | chr6.3:29308686-29308705 | None:intergenic | 25.0% |
| ! | AAACCATTAAACCATACTTA+TGG | + | chr6.3:29308680-29308699 | MS.gene80413:intron | 25.0% |
| ! | AAACCTATCAAATACAATGA+TGG | + | chr6.3:29305573-29305592 | MS.gene80413:CDS | 25.0% |
| ! | AATTACAGGTCTAAAGAATA+GGG | + | chr6.3:29303727-29303746 | MS.gene80413:intron | 25.0% |
| ! | ACACATAAAACAACAAACAA+GGG | + | chr6.3:29302940-29302959 | MS.gene80413:intron | 25.0% |
| ! | ACACCATATATCTTATTGTT+GGG | + | chr6.3:29307986-29308005 | MS.gene80413:intron | 25.0% |
| ! | ACTTTGTATACTAAAGAACA+AGG | - | chr6.3:29308032-29308051 | None:intergenic | 25.0% |
| ! | AGAATATTATACGAGAAGTT+AGG | - | chr6.3:29306242-29306261 | None:intergenic | 25.0% |
| ! | ATGATTGAAGTTTCTCTATT+TGG | - | chr6.3:29307083-29307102 | None:intergenic | 25.0% |
| ! | ATTATGAAAAAGCTAGAGAA+AGG | + | chr6.3:29308473-29308492 | MS.gene80413:intron | 25.0% |
| ! | ATTCTCAATCTAAGAAGAAT+GGG | - | chr6.3:29306842-29306861 | None:intergenic | 25.0% |
| ! | CATATAAGATTGAAAATCGT+AGG | - | chr6.3:29305080-29305099 | None:intergenic | 25.0% |
| ! | GAGTATGTATCAATTTGAAT+TGG | - | chr6.3:29306659-29306678 | None:intergenic | 25.0% |
| ! | GATTATAATAGCATGTGATT+TGG | - | chr6.3:29307867-29307886 | None:intergenic | 25.0% |
| ! | GCTATATGAGAAAAAAATGA+TGG | - | chr6.3:29305853-29305872 | None:intergenic | 25.0% |
| ! | GGTAATATCTATCCTTAAAT+AGG | + | chr6.3:29307133-29307152 | MS.gene80413:intron | 25.0% |
| ! | GTAATATAAAATGGCAAACA+AGG | - | chr6.3:29308129-29308148 | None:intergenic | 25.0% |
| ! | GTTATACAATGAAGGAAAAA+GGG | + | chr6.3:29303301-29303320 | MS.gene80413:intron | 25.0% |
| ! | GTTATTCAAACTTAGTGATT+TGG | + | chr6.3:29304666-29304685 | MS.gene80413:intron | 25.0% |
| ! | GTTTGAACAAAAGATCTAAA+CGG | - | chr6.3:29302507-29302526 | None:intergenic | 25.0% |
| ! | TACACCATATATCTTATTGT+TGG | + | chr6.3:29307985-29308004 | MS.gene80413:intron | 25.0% |
| ! | TATTAAAACAAAGAAATGGG+AGG | + | chr6.3:29306938-29306957 | MS.gene80413:intron | 25.0% |
| ! | TCAATACAGATTCCTATTTA+AGG | - | chr6.3:29307148-29307167 | None:intergenic | 25.0% |
| ! | TCACATGCTATTATAATCTT+CGG | + | chr6.3:29307869-29307888 | MS.gene80413:intron | 25.0% |
| ! | TTATTTCCTCCAAAATTTAG+AGG | + | chr6.3:29302766-29302785 | MS.gene80413:intron | 25.0% |
| ! | TTCTTTAAACTACTCAAACT+GGG | + | chr6.3:29305209-29305228 | MS.gene80413:intron | 25.0% |
| ! | TTTCTTTAAACTACTCAAAC+TGG | + | chr6.3:29305208-29305227 | MS.gene80413:intron | 25.0% |
| !! | AAACTTCAATCATTTGAGTT+TGG | + | chr6.3:29307090-29307109 | MS.gene80413:intron | 25.0% |
| !! | TTCTTTGACTTAATTGGATT+TGG | - | chr6.3:29308439-29308458 | None:intergenic | 25.0% |
| !! | TTTGTTTCTTCCGATTTATA+AGG | - | chr6.3:29308507-29308526 | None:intergenic | 25.0% |
| !! | TTTTGTGCCTCATTTTATTA+GGG | + | chr6.3:29308780-29308799 | MS.gene80413:intron | 25.0% |
| !! | TTTTTGAATTACAATGGCTA+TGG | + | chr6.3:29305332-29305351 | MS.gene80413:intron | 25.0% |
| !! | TTTTTGTGCCTCATTTTATT+AGG | + | chr6.3:29308779-29308798 | MS.gene80413:intron | 25.0% |
| !!! | AAGCTTTAATTGAGTCTTTT+TGG | - | chr6.3:29303258-29303277 | None:intergenic | 25.0% |
| !!! | CGGTTAATTTTTTAAAGCAT+TGG | + | chr6.3:29307402-29307421 | MS.gene80413:intron | 25.0% |
| !!! | TATTTTTTTTCTCACTTTCC+GGG | - | chr6.3:29302376-29302395 | None:intergenic | 25.0% |
| !!! | TCTTTCAGTTTTATTGATGT+CGG | + | chr6.3:29302886-29302905 | MS.gene80413:intron | 25.0% |
| !!! | TGGCATATTGATTCAAATAT+CGG | + | chr6.3:29304621-29304640 | MS.gene80413:intron | 25.0% |
| !!! | TGTTTGCCATTTTATATTAC+AGG | + | chr6.3:29308129-29308148 | MS.gene80413:intron | 25.0% |
| !!! | TTATAAGAAGTTCTGAAACT+AGG | + | chr6.3:29303433-29303452 | MS.gene80413:intron | 25.0% |
| !!! | TTGACTTGTATCTGTTTATA+CGG | - | chr6.3:29307797-29307816 | None:intergenic | 25.0% |
| !!! | TTGTTCATTTTTTAACATGC+TGG | + | chr6.3:29305308-29305327 | MS.gene80413:intron | 25.0% |
| !!! | TTTAGCTTTTATCGATTTTG+AGG | - | chr6.3:29307911-29307930 | None:intergenic | 25.0% |
| AAACCAATATGCTGTGTAAA+TGG | - | chr6.3:29304601-29304620 | None:intergenic | 30.0% | |
| AAACCATTTACACAGCATAT+TGG | + | chr6.3:29304595-29304614 | MS.gene80413:intron | 30.0% | |
| AACAAACAAGGGATTTAAGA+AGG | + | chr6.3:29302951-29302970 | MS.gene80413:intron | 30.0% | |
| AAGAATAAAAGACGGATAAC+CGG | - | chr6.3:29306287-29306306 | None:intergenic | 30.0% | |
| AATAATCCAGCCAAAGTAAT+AGG | + | chr6.3:29307038-29307057 | MS.gene80413:intron | 30.0% | |
| AATTCTTCACGAAGTTGTTT+GGG | - | chr6.3:29305621-29305640 | None:intergenic | 30.0% | |
| AATTGGCAATTGACATGATA+AGG | + | chr6.3:29307189-29307208 | MS.gene80413:intron | 30.0% | |
| AGAATGAGATGAAAATATGG+TGG | + | chr6.3:29303651-29303670 | MS.gene80413:intron | 30.0% | |
| AGACCATCATTGTATTTGAT+AGG | - | chr6.3:29305579-29305598 | None:intergenic | 30.0% | |
| AGAGGATGAAGCAATAAAAT+TGG | - | chr6.3:29305762-29305781 | None:intergenic | 30.0% | |
| AGGTCTAATTCCTATTACTT+TGG | - | chr6.3:29307051-29307070 | None:intergenic | 30.0% | |
| AGTCTTAGTGAATCAAATAG+TGG | - | chr6.3:29302812-29302831 | None:intergenic | 30.0% | |
| ATAACTACTAGTTACGGATA+GGG | - | chr6.3:29306605-29306624 | None:intergenic | 30.0% | |
| ATATATCTTATTGTTGGGGA+TGG | + | chr6.3:29307991-29308010 | MS.gene80413:intron | 30.0% | |
| ATATCAACTTCATCTAAGAG+TGG | + | chr6.3:29304792-29304811 | MS.gene80413:intron | 30.0% | |
| ATCAAGTATACCATTATGCA+AGG | + | chr6.3:29303539-29303558 | MS.gene80413:intron | 30.0% | |
| ATCCCCAACAATAAGATATA+TGG | - | chr6.3:29307992-29308011 | None:intergenic | 30.0% | |
| ATCTCAGTTCATGGTTTAAT+TGG | + | chr6.3:29305275-29305294 | MS.gene80413:intron | 30.0% | |
| ATGGTATACTTGATGAAAGT+CGG | - | chr6.3:29303533-29303552 | None:intergenic | 30.0% | |
| ATTTAAGTAAACTCCTGTCA+TGG | + | chr6.3:29305357-29305376 | MS.gene80413:intron | 30.0% | |
| CAAGAAAGATCTATAGATCA+TGG | - | chr6.3:29307373-29307392 | None:intergenic | 30.0% | |
| CAATTACAGGTCTAAAGAAT+AGG | + | chr6.3:29303726-29303745 | MS.gene80413:intron | 30.0% | |
| CACACATAAAACAACAAACA+AGG | + | chr6.3:29302939-29302958 | MS.gene80413:intron | 30.0% | |
| CACCATATATCTTATTGTTG+GGG | + | chr6.3:29307987-29308006 | MS.gene80413:intron | 30.0% | |
| CATTCTCAATCTAAGAAGAA+TGG | - | chr6.3:29306843-29306862 | None:intergenic | 30.0% | |
| CGATGGAAATATAGAAACAA+TGG | - | chr6.3:29307501-29307520 | None:intergenic | 30.0% | |
| CGTCAACATATATTAGACAT+GGG | + | chr6.3:29305726-29305745 | MS.gene80413:CDS | 30.0% | |
| CTATTCTTTAGACCTGTAAT+TGG | - | chr6.3:29303728-29303747 | None:intergenic | 30.0% | |
| CTGCAAAGAAGTGAAATTAA+TGG | - | chr6.3:29305417-29305436 | None:intergenic | 30.0% | |
| GAAGTGAAATTAATGGTCAT+TGG | - | chr6.3:29305410-29305429 | None:intergenic | 30.0% | |
| GAATCACAAAATTGTAGAAG+AGG | + | chr6.3:29302722-29302741 | MS.gene80413:intron | 30.0% | |
| GAGAGAATGAGATGAAAATA+TGG | + | chr6.3:29303648-29303667 | MS.gene80413:intron | 30.0% | |
| GATACGATAACTACTAGTTA+CGG | - | chr6.3:29306611-29306630 | None:intergenic | 30.0% | |
| GGCAGAAATTCCTTATAAAT+CGG | + | chr6.3:29308494-29308513 | MS.gene80413:intron | 30.0% | |
| GGTTATACAATGAAGGAAAA+AGG | + | chr6.3:29303300-29303319 | MS.gene80413:intron | 30.0% | |
| TAAAAAATTGACCTTGGAAG+TGG | + | chr6.3:29306104-29306123 | MS.gene80413:intron | 30.0% | |
| TACAGTGATTCAAATTACAG+TGG | + | chr6.3:29304374-29304393 | MS.gene80413:intron | 30.0% | |
| TCAGAACTTCTTATAATCCA+TGG | - | chr6.3:29303429-29303448 | None:intergenic | 30.0% | |
| TCATTCTCCCTAATAAAATG+AGG | - | chr6.3:29308790-29308809 | None:intergenic | 30.0% | |
| TCGTCAACATATATTAGACA+TGG | + | chr6.3:29305725-29305744 | MS.gene80413:CDS | 30.0% | |
| TCTTCAACTCATTGTATGTT+TGG | - | chr6.3:29304971-29304990 | None:intergenic | 30.0% | |
| TGGTGGCATCTATTAAAAAA+AGG | + | chr6.3:29303668-29303687 | MS.gene80413:intron | 30.0% | |
| TGGTTGAAAGGAAAAAAAGT+GGG | + | chr6.3:29307110-29307129 | MS.gene80413:intron | 30.0% | |
| TTATACGAGAAGTTAGATTG+CGG | + | chr6.3:29307321-29307340 | MS.gene80413:intron | 30.0% | |
| TTCTCAATCTAAGAAGAATG+GGG | - | chr6.3:29306841-29306860 | None:intergenic | 30.0% | |
| TTGGTTGAAAGGAAAAAAAG+TGG | + | chr6.3:29307109-29307128 | MS.gene80413:intron | 30.0% | |
| TTTGGCTGGATTATTTGTAA+CGG | - | chr6.3:29307033-29307052 | None:intergenic | 30.0% | |
| ! | AGCTTAACATTTTTCCATTC+AGG | + | chr6.3:29307702-29307721 | MS.gene80413:CDS | 30.0% |
| ! | ATCATTTGAGTTTGGTTGAA+AGG | + | chr6.3:29307098-29307117 | MS.gene80413:intron | 30.0% |
| ! | ATTTTATTGCTTCATCCTCT+TGG | + | chr6.3:29305762-29305781 | MS.gene80413:CDS | 30.0% |
| ! | CATTTTATTAGGGAGAATGA+AGG | + | chr6.3:29308790-29308809 | MS.gene80413:intron | 30.0% |
| ! | GCTGGATTTTTGAATTACAA+TGG | + | chr6.3:29305326-29305345 | MS.gene80413:intron | 30.0% |
| ! | GCTTAACATTTTTCCATTCA+GGG | + | chr6.3:29307703-29307722 | MS.gene80413:CDS | 30.0% |
| ! | TTCAAGTTTGTTTCAGTTGT+AGG | + | chr6.3:29304703-29304722 | MS.gene80413:intron | 30.0% |
| ! | TTCCTTCTCTTTTATCAATC+TGG | + | chr6.3:29303368-29303387 | MS.gene80413:intron | 30.0% |
| ! | TTTGGTCTTTCTTTGAACTT+TGG | - | chr6.3:29308421-29308440 | None:intergenic | 30.0% |
| !! | TAATAGCATGTGATTTGGTT+CGG | - | chr6.3:29307862-29307881 | None:intergenic | 30.0% |
| !! | TTGTCAAATAGTAGCTTTAG+CGG | + | chr6.3:29305971-29305990 | MS.gene80413:intron | 30.0% |
| !!! | AAATCAAAAGCGTTTTGATG+GGG | + | chr6.3:29303279-29303298 | MS.gene80413:intron | 30.0% |
| !!! | ATTTTTTTTCTCACTTTCCG+GGG | - | chr6.3:29302375-29302394 | None:intergenic | 30.0% |
| !!! | CAAATCAAAAGCGTTTTGAT+GGG | + | chr6.3:29303278-29303297 | MS.gene80413:intron | 30.0% |
| !!! | CAATGTTTTAGAAATCGAAC+CGG | + | chr6.3:29305149-29305168 | MS.gene80413:intron | 30.0% |
| !!! | CTTGTTTGTTGTTTTATGTG+TGG | - | chr6.3:29302941-29302960 | None:intergenic | 30.0% |
| !!! | TCAAATCAAAAGCGTTTTGA+TGG | + | chr6.3:29303277-29303296 | MS.gene80413:intron | 30.0% |
| !!! | TTGCCATTTTATATTACAGG+TGG | + | chr6.3:29308132-29308151 | MS.gene80413:intron | 30.0% |
| !!! | TTTACACAGCATATTGGTTT+TGG | + | chr6.3:29304601-29304620 | MS.gene80413:intron | 30.0% |
| AAAAAATGGACAGCATTGTG+AGG | - | chr6.3:29307946-29307965 | None:intergenic | 35.0% | |
| AAAAATGGACAGCATTGTGA+GGG | - | chr6.3:29307945-29307964 | None:intergenic | 35.0% | |
| AAACCATTTCCACAGCAAAA+TGG | + | chr6.3:29304552-29304571 | MS.gene80413:intron | 35.0% | |
| AACTTCGTGAAGAATTCGAT+AGG | + | chr6.3:29305625-29305644 | MS.gene80413:CDS | 35.0% | |
| AAGAAAGAATAGCTAGAACC+TGG | + | chr6.3:29305463-29305482 | MS.gene80413:CDS | 35.0% | |
| AAGGAAAAAGGGATTATGAC+AGG | + | chr6.3:29303312-29303331 | MS.gene80413:intron | 35.0% | |
| AATCGCAACCATCAGATAAT+TGG | + | chr6.3:29303860-29303879 | MS.gene80413:intron | 35.0% | |
| ACAAGTGTCCAATTATCTGA+TGG | - | chr6.3:29303871-29303890 | None:intergenic | 35.0% | |
| ACACATCTTTCCTTGCATAA+TGG | - | chr6.3:29303552-29303571 | None:intergenic | 35.0% | |
| ACGACCAACAATATAGAAGT+TGG | - | chr6.3:29307588-29307607 | None:intergenic | 35.0% | |
| AGAAAAAGAAAAGGAAGAGC+CGG | + | chr6.3:29303699-29303718 | MS.gene80413:intron | 35.0% | |
| AGAAAGAATAGCTAGAACCT+GGG | + | chr6.3:29305464-29305483 | MS.gene80413:CDS | 35.0% | |
| AGATGACGTGTCTTAAATGA+TGG | - | chr6.3:29303057-29303076 | None:intergenic | 35.0% | |
| ATAGAAACAATGGTTGTCTC+TGG | - | chr6.3:29307491-29307510 | None:intergenic | 35.0% | |
| ATTATGCAAGGAAAGATGTG+TGG | + | chr6.3:29303551-29303570 | MS.gene80413:intron | 35.0% | |
| ATTATGGGTTCTCTTTGTTC+AGG | + | chr6.3:29304236-29304255 | MS.gene80413:CDS | 35.0% | |
| CGATAAGTTAGGCAAAATCA+TGG | - | chr6.3:29304943-29304962 | None:intergenic | 35.0% | |
| CGTATAATCAGTAATAACCG+CGG | - | chr6.3:29307308-29307327 | None:intergenic | 35.0% | |
| CTAATTCCTATTACTTTGGC+TGG | - | chr6.3:29307047-29307066 | None:intergenic | 35.0% | |
| CTGCCACCTGTAATATAAAA+TGG | - | chr6.3:29308138-29308157 | None:intergenic | 35.0% | |
| GAAATTGAACTATGACTCAG+AGG | - | chr6.3:29305192-29305211 | None:intergenic | 35.0% | |
| GAAGAGAAGTAAGTAAAACG+AGG | - | chr6.3:29304200-29304219 | None:intergenic | 35.0% | |
| GAATCTCAATGACCAAGAAT+TGG | + | chr6.3:29307172-29307191 | MS.gene80413:intron | 35.0% | |
| GAATTCTTCACGAAGTTGTT+TGG | - | chr6.3:29305622-29305641 | None:intergenic | 35.0% | |
| GACCAGATTGATAAAAGAGA+AGG | - | chr6.3:29303373-29303392 | None:intergenic | 35.0% | |
| GATAACTACTAGTTACGGAT+AGG | - | chr6.3:29306606-29306625 | None:intergenic | 35.0% | |
| GATGACGTGTCTTAAATGAT+GGG | - | chr6.3:29303056-29303075 | None:intergenic | 35.0% | |
| GATGTCGGAGTAAAATAACA+AGG | + | chr6.3:29302901-29302920 | MS.gene80413:intron | 35.0% | |
| GATTCACTAAGACTTGAAAG+TGG | + | chr6.3:29302818-29302837 | MS.gene80413:intron | 35.0% | |
| GCATATTTACAATATCGACG+TGG | - | chr6.3:29307011-29307030 | None:intergenic | 35.0% | |
| GCATGCATACATACTCAATA+TGG | - | chr6.3:29306697-29306716 | None:intergenic | 35.0% | |
| GGTTGAAAGGAAAAAAAGTG+GGG | + | chr6.3:29307111-29307130 | MS.gene80413:intron | 35.0% | |
| GTATAATCAGTAATAACCGC+GGG | - | chr6.3:29307307-29307326 | None:intergenic | 35.0% | |
| GTTGAAAGGAAAAAAAGTGG+GGG | + | chr6.3:29307112-29307131 | MS.gene80413:intron | 35.0% | |
| GTTTGGATTGACGATAAGTT+AGG | - | chr6.3:29304954-29304973 | None:intergenic | 35.0% | |
| TATGCATGGTGCATAAGTTA+TGG | - | chr6.3:29303836-29303855 | None:intergenic | 35.0% | |
| TCATGTCAATTGCCAATTCT+TGG | - | chr6.3:29307187-29307206 | None:intergenic | 35.0% | |
| TCTAAAGAATAGGGTTACGT+GGG | + | chr6.3:29303736-29303755 | MS.gene80413:intron | 35.0% | |
| TGACACTAAGGTAAACAAGA+TGG | + | chr6.3:29308162-29308181 | MS.gene80413:CDS | 35.0% | |
| TTAACAAGGCATGACCATTA+TGG | - | chr6.3:29305695-29305714 | None:intergenic | 35.0% | |
| TTAAGAAATCCGGTCCATAA+TGG | + | chr6.3:29305678-29305697 | MS.gene80413:CDS | 35.0% | |
| TTAGCCATGTTCTCTATGTT+CGG | + | chr6.3:29302241-29302260 | MS.gene80413:intron | 35.0% | |
| TTCTTGGTCATTGAGATTCA+CGG | - | chr6.3:29307171-29307190 | None:intergenic | 35.0% | |
| TTGATGGGGTTATACAATGA+AGG | + | chr6.3:29303293-29303312 | MS.gene80413:intron | 35.0% | |
| TTGGAGGAAATAATTTACGG+TGG | - | chr6.3:29302759-29302778 | None:intergenic | 35.0% | |
| ! | ACGAGTATCGTTCATTAACA+AGG | - | chr6.3:29305709-29305728 | None:intergenic | 35.0% |
| ! | AGTCGCTTCTTTGACTTAAT+TGG | - | chr6.3:29308445-29308464 | None:intergenic | 35.0% |
| ! | ATGATGGTCTTGATAACTAC+AGG | + | chr6.3:29305589-29305608 | MS.gene80413:CDS | 35.0% |
| ! | TACACGTTTTTGTGTAGATC+CGG | + | chr6.3:29308217-29308236 | MS.gene80413:CDS | 35.0% |
| ! | TCTCTATTTGGAATCGTGTT+AGG | - | chr6.3:29307071-29307090 | None:intergenic | 35.0% |
| !! | AAACCATTTTGCTGTGGAAA+TGG | - | chr6.3:29304558-29304577 | None:intergenic | 35.0% |
| !! | CAGAGAAGTGCTTAAACAAT+AGG | - | chr6.3:29302531-29302550 | None:intergenic | 35.0% |
| !! | CATTAGCCTCTAAATTTTGG+AGG | - | chr6.3:29302775-29302794 | None:intergenic | 35.0% |
| !! | CGGTTCGATTTCTAAAACAT+TGG | - | chr6.3:29305151-29305170 | None:intergenic | 35.0% |
| !! | GATCTTTCTTGTTTGCTGTA+CGG | + | chr6.3:29307382-29307401 | MS.gene80413:intron | 35.0% |
| !! | GCATCTGAAGTTTTTCTACA+CGG | + | chr6.3:29308256-29308275 | MS.gene80413:CDS | 35.0% |
| !! | TCGCATTAGCCTCTAAATTT+TGG | - | chr6.3:29302778-29302797 | None:intergenic | 35.0% |
| !! | TTTTGGGTACAAAATGTCAC+AGG | + | chr6.3:29306564-29306583 | MS.gene80413:intron | 35.0% |
| !!! | GCTACTTTTGAAGACTTAGA+CGG | - | chr6.3:29308358-29308377 | None:intergenic | 35.0% |
| !!! | GTGTTTGTTGCTGTTTTCAA+TGG | + | chr6.3:29304764-29304783 | MS.gene80413:intron | 35.0% |
| AAAATGGACAGCATTGTGAG+GGG | - | chr6.3:29307944-29307963 | None:intergenic | 40.0% | |
| AAACTCAAAGACACCATGAC+AGG | - | chr6.3:29305373-29305392 | None:intergenic | 40.0% | |
| AACACCACAACTGTTGAACT+CGG | - | chr6.3:29303221-29303240 | None:intergenic | 40.0% | |
| AACCTCCCAAATAACTGAAC+CGG | + | chr6.3:29305247-29305266 | MS.gene80413:intron | 40.0% | |
| AAGGGATTATGACAGGTTCA+CGG | + | chr6.3:29303319-29303338 | MS.gene80413:intron | 40.0% | |
| ACCTAGATGCAAATCGCAAA+CGG | - | chr6.3:29304289-29304308 | None:intergenic | 40.0% | |
| AGAAAAACTTCAGATGCCTC+CGG | - | chr6.3:29308253-29308272 | None:intergenic | 40.0% | |
| AGAGAGTGGTTAAGATAGAG+TGG | + | chr6.3:29303769-29303788 | MS.gene80413:intron | 40.0% | |
| AGGATTTGAACCTACGACAT+CGG | - | chr6.3:29306802-29306821 | None:intergenic | 40.0% | |
| AGGTTTCTGCAATCAGATTG+TGG | - | chr6.3:29304073-29304092 | None:intergenic | 40.0% | |
| ATGAGGTAGGAGAAGATTGT+GGG | - | chr6.3:29303934-29303953 | None:intergenic | 40.0% | |
| CAGACTAATAAAAAGACCCG+CGG | + | chr6.3:29307288-29307307 | MS.gene80413:intron | 40.0% | |
| CGCCTTTCAGTTAAGAAATC+CGG | + | chr6.3:29305668-29305687 | MS.gene80413:CDS | 40.0% | |
| CTACTCAAACTGGGATGAAA+CGG | + | chr6.3:29305218-29305237 | MS.gene80413:intron | 40.0% | |
| CTCTCTCAACTGAAAACCAT+CGG | - | chr6.3:29303619-29303638 | None:intergenic | 40.0% | |
| GAAAGAATAGCTAGAACCTG+GGG | + | chr6.3:29305465-29305484 | MS.gene80413:CDS | 40.0% | |
| GAATCCGAACATAGAGAACA+TGG | - | chr6.3:29302248-29302267 | None:intergenic | 40.0% | |
| GACATTTGCAAACAGCAGAT+TGG | - | chr6.3:29303170-29303189 | None:intergenic | 40.0% | |
| GACCGGATTTCTTAACTGAA+AGG | - | chr6.3:29305673-29305692 | None:intergenic | 40.0% | |
| GATCAAGAACTCCATCTTCT+AGG | - | chr6.3:29307469-29307488 | None:intergenic | 40.0% | |
| GCAATACTACATACCCTGAA+TGG | - | chr6.3:29307719-29307738 | None:intergenic | 40.0% | |
| GGAAAATGACGTCGAAGTTA+CGG | - | chr6.3:29303982-29304001 | None:intergenic | 40.0% | |
| GGTTGCGATTAACTTATGCA+TGG | - | chr6.3:29303850-29303869 | None:intergenic | 40.0% | |
| GGTTTCTGCAATCAGATTGT+GGG | - | chr6.3:29304072-29304091 | None:intergenic | 40.0% | |
| GTCTAAAGAATAGGGTTACG+TGG | + | chr6.3:29303735-29303754 | MS.gene80413:intron | 40.0% | |
| GTTAAATCATGCACATGCAC+CGG | + | chr6.3:29303082-29303101 | MS.gene80413:intron | 40.0% | |
| GTTAAGATAGAGTGGCTAAG+CGG | + | chr6.3:29303777-29303796 | MS.gene80413:intron | 40.0% | |
| TATGAGGTAGGAGAAGATTG+TGG | - | chr6.3:29303935-29303954 | None:intergenic | 40.0% | |
| TATGTTCGGATTCTTCGTTC+AGG | + | chr6.3:29302255-29302274 | MS.gene80413:intron | 40.0% | |
| TCAATCTAAGAAGAATGGGG+CGG | - | chr6.3:29306838-29306857 | None:intergenic | 40.0% | |
| TGAAATTGGAGTCGCGAAAA+CGG | - | chr6.3:29304106-29304125 | None:intergenic | 40.0% | |
| TGAAGTACAATGGCATGCAA+AGG | + | chr6.3:29307544-29307563 | MS.gene80413:CDS | 40.0% | |
| TGACCCTGATCATGGAAAAA+AGG | + | chr6.3:29307652-29307671 | MS.gene80413:CDS | 40.0% | |
| TGCTTGCGATTTGCGATTAT+GGG | + | chr6.3:29304221-29304240 | MS.gene80413:CDS | 40.0% | |
| TGTCTCCGGTTCAGTTATTT+GGG | - | chr6.3:29305255-29305274 | None:intergenic | 40.0% | |
| TGTTCATAGGTCCTAGAAGA+TGG | + | chr6.3:29307455-29307474 | MS.gene80413:intron | 40.0% | |
| TTAAATCATGCACATGCACC+GGG | + | chr6.3:29303083-29303102 | MS.gene80413:intron | 40.0% | |
| TTAACCAGTGTTGTCAATCG+TGG | - | chr6.3:29306051-29306070 | None:intergenic | 40.0% | |
| TTAGACCTGTAATTGGCAAC+CGG | - | chr6.3:29303721-29303740 | None:intergenic | 40.0% | |
| TTATTGCTTCATCCTCTTGG+AGG | + | chr6.3:29305765-29305784 | MS.gene80413:CDS | 40.0% | |
| TTATTGTTGGGGATGGCAAA+TGG | + | chr6.3:29307998-29308017 | MS.gene80413:intron | 40.0% | |
| TTGGCTTATTGGAGGAGATT+TGG | + | chr6.3:29305542-29305561 | MS.gene80413:CDS | 40.0% | |
| TTGTCTCCGGTTCAGTTATT+TGG | - | chr6.3:29305256-29305275 | None:intergenic | 40.0% | |
| TTTATGTGTGGTGCAGATTC+AGG | - | chr6.3:29302929-29302948 | None:intergenic | 40.0% | |
| TTTCCATCGCCTATGCATTA+TGG | + | chr6.3:29307512-29307531 | MS.gene80413:CDS | 40.0% | |
| TTTGCTACAAACTTTGTCCC+CGG | + | chr6.3:29302355-29302374 | MS.gene80413:CDS | 40.0% | |
| ! | AAAGCGCTCTTAGTTCAGTT+CGG | + | chr6.3:29306755-29306774 | MS.gene80413:intron | 40.0% |
| ! | ACGTGTAGAAAGCTTTAGCA+CGG | - | chr6.3:29308204-29308223 | None:intergenic | 40.0% |
| ! | TGCAATCAGATTGTGGGTTA+GGG | - | chr6.3:29304066-29304085 | None:intergenic | 40.0% |
| ! | TTCTTTGAACTTTGGTGCAG+AGG | - | chr6.3:29308413-29308432 | None:intergenic | 40.0% |
| !! | GAAACTTCATCACTGGTTCA+TGG | + | chr6.3:29304828-29304847 | MS.gene80413:intron | 40.0% |
| !! | GAGTGTTGAAACTTCATCAC+TGG | + | chr6.3:29304821-29304840 | MS.gene80413:intron | 40.0% |
| !! | GTAACTTCGACGTCATTTTC+CGG | + | chr6.3:29303981-29304000 | MS.gene80413:CDS | 40.0% |
| !! | GTCATTTTCCGGTTGATTCA+CGG | + | chr6.3:29303992-29304011 | MS.gene80413:CDS | 40.0% |
| !! | GTTAGATTGCGGTTTTGACA+TGG | + | chr6.3:29307332-29307351 | MS.gene80413:intron | 40.0% |
| !! | TGGAAAAAAGGTGCTTAGCA+TGG | + | chr6.3:29307664-29307683 | MS.gene80413:CDS | 40.0% |
| !!! | ACTCTGAAACCATTTTGCTG+TGG | - | chr6.3:29304564-29304583 | None:intergenic | 40.0% |
| !!! | AGCACCTTTTTTCCATGATC+AGG | - | chr6.3:29307659-29307678 | None:intergenic | 40.0% |
| !!! | AGCAGATTGGCGTTGATTTT+GGG | - | chr6.3:29303157-29303176 | None:intergenic | 40.0% |
| !!! | GCACCTTTTTTCCATGATCA+GGG | - | chr6.3:29307658-29307677 | None:intergenic | 40.0% |
| AAACCGCTACTCTATAGCAC+CGG | - | chr6.3:29305904-29305923 | None:intergenic | 45.0% | |
| AAATGACGTCGAAGTTACGG+TGG | - | chr6.3:29303979-29303998 | None:intergenic | 45.0% | |
| AAATGGACAGCATTGTGAGG+GGG | - | chr6.3:29307943-29307962 | None:intergenic | 45.0% | |
| AACTGCCTAAACCAGTTACC+CGG | - | chr6.3:29303104-29303123 | None:intergenic | 45.0% | |
| AAGATTGTGGGGACTGATTG+TGG | - | chr6.3:29303922-29303941 | None:intergenic | 45.0% | |
| AAGGAAAGATGTGTGGTTGG+TGG | + | chr6.3:29303558-29303577 | MS.gene80413:intron | 45.0% | |
| AAGGCATGACCATTATGGAC+CGG | - | chr6.3:29305690-29305709 | None:intergenic | 45.0% | |
| AAGGTTGAGTCGTATGAGGT+AGG | - | chr6.3:29303947-29303966 | None:intergenic | 45.0% | |
| ACAGGTTCACGGAATTGTGA+TGG | + | chr6.3:29303330-29303349 | MS.gene80413:intron | 45.0% | |
| ACCCAGTCAACAACAATGCT+TGG | + | chr6.3:29302329-29302348 | MS.gene80413:CDS | 45.0% | |
| ACCTTTGTGAAACCTCCAAG+AGG | - | chr6.3:29305780-29305799 | None:intergenic | 45.0% | |
| ACGATGTTCCGTTAGATGTC+AGG | + | chr6.3:29305802-29305821 | MS.gene80413:CDS | 45.0% | |
| AGATTGTGGGGACTGATTGT+GGG | - | chr6.3:29303921-29303940 | None:intergenic | 45.0% | |
| AGGAAAGATGTGTGGTTGGT+GGG | + | chr6.3:29303559-29303578 | MS.gene80413:intron | 45.0% | |
| ATATCGACGTGGTGATCAGT+TGG | - | chr6.3:29307000-29307019 | None:intergenic | 45.0% | |
| ATGTTAAGCTTCTCGAGACC+AGG | - | chr6.3:29307692-29307711 | None:intergenic | 45.0% | |
| CAATCCACGATTGACAACAC+TGG | + | chr6.3:29306044-29306063 | MS.gene80413:intron | 45.0% | |
| CAGGATGGAGCAATATAGCA+AGG | + | chr6.3:29305821-29305840 | MS.gene80413:CDS | 45.0% | |
| CATAATCGCAAATCGCAAGC+AGG | - | chr6.3:29304222-29304241 | None:intergenic | 45.0% | |
| CATCGCCTATGCATTATGGA+GGG | + | chr6.3:29307516-29307535 | MS.gene80413:CDS | 45.0% | |
| CCAATAAGCCAATTTCCAGC+TGG | - | chr6.3:29305534-29305553 | None:intergenic | 45.0% | |
| CCATGAACTGAGATTGTCTC+CGG | - | chr6.3:29305269-29305288 | None:intergenic | 45.0% | |
| CCCAGTCAACAACAATGCTT+GGG | + | chr6.3:29302330-29302349 | MS.gene80413:CDS | 45.0% | |
| CGAATTTCACCCTTTCTTGC+CGG | + | chr6.3:29304313-29304332 | MS.gene80413:intron | 45.0% | |
| CTGCAATCAGATTGTGGGTT+AGG | - | chr6.3:29304067-29304086 | None:intergenic | 45.0% | |
| CTGCTTGCGATTTGCGATTA+TGG | + | chr6.3:29304220-29304239 | MS.gene80413:CDS | 45.0% | |
| GACTTGTATGACCCTGATCA+TGG | + | chr6.3:29307644-29307663 | MS.gene80413:CDS | 45.0% | |
| GCATGCCATTGTACTTCAGT+TGG | - | chr6.3:29307542-29307561 | None:intergenic | 45.0% | |
| GCGAAAACGGAGAAAGAATG+AGG | - | chr6.3:29304093-29304112 | None:intergenic | 45.0% | |
| GGATTTGAACCTACGACATC+GGG | - | chr6.3:29306801-29306820 | None:intergenic | 45.0% | |
| GGCGCCAACTTCTATATTGT+TGG | + | chr6.3:29307581-29307600 | MS.gene80413:CDS | 45.0% | |
| GTATCCGAGTTCAACAGTTG+TGG | + | chr6.3:29303214-29303233 | MS.gene80413:intron | 45.0% | |
| GTATTGCCGGAAAACTACGT+CGG | - | chr6.3:29304340-29304359 | None:intergenic | 45.0% | |
| GTTACTCCCCGTTGAAATCA+GGG | + | chr6.3:29304910-29304929 | MS.gene80413:intron | 45.0% | |
| GTTGAACTCGGATACTGAAG+TGG | - | chr6.3:29303209-29303228 | None:intergenic | 45.0% | |
| TACAAGTCCCGTTTCTCAGT+TGG | - | chr6.3:29307632-29307651 | None:intergenic | 45.0% | |
| TACAATGGCATGCAAAGGCA+CGG | + | chr6.3:29307549-29307568 | MS.gene80413:CDS | 45.0% | |
| TACACGGTGTTCTTGAAGCT+GGG | + | chr6.3:29308272-29308291 | MS.gene80413:CDS | 45.0% | |
| TAGTTACGGATAGGGATGAC+AGG | - | chr6.3:29306597-29306616 | None:intergenic | 45.0% | |
| TAGTTCAGTTCGGTAGAACG+CGG | + | chr6.3:29306765-29306784 | MS.gene80413:intron | 45.0% | |
| TCATTGCTCCAGCTGGAAAT+TGG | + | chr6.3:29305523-29305542 | MS.gene80413:CDS | 45.0% | |
| TCCTCTTGGAGGTTTCACAA+AGG | + | chr6.3:29305776-29305795 | MS.gene80413:CDS | 45.0% | |
| TGAGGTAGGAGAAGATTGTG+GGG | - | chr6.3:29303933-29303952 | None:intergenic | 45.0% | |
| TGCAAGGAAAGATGTGTGGT+TGG | + | chr6.3:29303555-29303574 | MS.gene80413:intron | 45.0% | |
| TGCTCCATCCTGACATCTAA+CGG | - | chr6.3:29305813-29305832 | None:intergenic | 45.0% | |
| TGGGTCATCCAACTGAGAAA+CGG | + | chr6.3:29307621-29307640 | MS.gene80413:CDS | 45.0% | |
| TGTTACTCCCCGTTGAAATC+AGG | + | chr6.3:29304909-29304928 | MS.gene80413:intron | 45.0% | |
| TGTTCCGTTAGATGTCAGGA+TGG | + | chr6.3:29305806-29305825 | MS.gene80413:CDS | 45.0% | |
| TTGCAGTTCAACCACTTCCA+AGG | - | chr6.3:29306118-29306137 | None:intergenic | 45.0% | |
| TTGCTACTGCACTGTATTGC+CGG | - | chr6.3:29304353-29304372 | None:intergenic | 45.0% | |
| TTTCGCGACTCCAATTTCAC+CGG | + | chr6.3:29304107-29304126 | MS.gene80413:CDS | 45.0% | |
| ! | ACGTTTTTGTGTAGATCCGG+AGG | + | chr6.3:29308220-29308239 | MS.gene80413:CDS | 45.0% |
| ! | AGAAAGCTTTAGCACGGCTA+GGG | - | chr6.3:29308198-29308217 | None:intergenic | 45.0% |
| ! | CCAGCTGGAAATTGGCTTAT+TGG | + | chr6.3:29305531-29305550 | MS.gene80413:CDS | 45.0% |
| ! | CCCAAGCATTGTTGTTGACT+GGG | - | chr6.3:29302333-29302352 | None:intergenic | 45.0% |
| ! | CTGCTGCTTCTCTTGCTTAT+CGG | + | chr6.3:29302846-29302865 | MS.gene80413:intron | 45.0% |
| ! | GCTGGAAATTGGCTTATTGG+AGG | + | chr6.3:29305534-29305553 | MS.gene80413:CDS | 45.0% |
| ! | GGTCTTGTCAGTTTGATGTC+CGG | - | chr6.3:29305171-29305190 | None:intergenic | 45.0% |
| ! | GTGTTGTCAATCGTGGATTG+CGG | - | chr6.3:29306044-29306063 | None:intergenic | 45.0% |
| ! | GTTTTCCAATGGTCCCTTTC+AGG | - | chr6.3:29302290-29302309 | None:intergenic | 45.0% |
| ! | TAGAAAGCTTTAGCACGGCT+AGG | - | chr6.3:29308199-29308218 | None:intergenic | 45.0% |
| ! | TGAAGACTTAGACGGTGTCA+CGG | - | chr6.3:29308350-29308369 | None:intergenic | 45.0% |
| ! | TGGTCAGCAAGGTTTTCCAA+TGG | - | chr6.3:29302301-29302320 | None:intergenic | 45.0% |
| !! | AATCAGATTGTGGGTTAGGG+TGG | - | chr6.3:29304063-29304082 | None:intergenic | 45.0% |
| !! | ATACCGGTGCTATAGAGTAG+CGG | + | chr6.3:29305898-29305917 | MS.gene80413:intron | 45.0% |
| !! | ATTTTCCGGTTGATTCACGG+CGG | + | chr6.3:29303995-29304014 | MS.gene80413:CDS | 45.0% |
| !!! | CAGCAGATTGGCGTTGATTT+TGG | - | chr6.3:29303158-29303177 | None:intergenic | 45.0% |
| !!! | CTTGGTAGCGCGTTTGTTTT+GGG | + | chr6.3:29306548-29306567 | MS.gene80413:intron | 45.0% |
| AACCGTGAAGCAAGTTTCGC+CGG | - | chr6.3:29304163-29304182 | None:intergenic | 50.0% | |
| AAGAGCCGGTTGCCAATTAC+AGG | + | chr6.3:29303713-29303732 | MS.gene80413:intron | 50.0% | |
| AGGATTGCCTTACGTTGAGG+AGG | + | chr6.3:29305500-29305519 | MS.gene80413:CDS | 50.0% | |
| AGTTCAGTTCGGTAGAACGC+GGG | + | chr6.3:29306766-29306785 | MS.gene80413:intron | 50.0% | |
| AGTTGGATGACCCATACCAG+CGG | - | chr6.3:29307615-29307634 | None:intergenic | 50.0% | |
| CAGGCCATTGTGACCTGAAA+GGG | + | chr6.3:29302274-29302293 | MS.gene80413:intron | 50.0% | |
| CCATCGCCTATGCATTATGG+AGG | + | chr6.3:29307515-29307534 | MS.gene80413:CDS | 50.0% | |
| CCGGAGACAATCTCAGTTCA+TGG | + | chr6.3:29305266-29305285 | MS.gene80413:intron | 50.0% | |
| CCTCCATAATGCATAGGCGA+TGG | - | chr6.3:29307518-29307537 | None:intergenic | 50.0% | |
| CTACACGGTGTTCTTGAAGC+TGG | + | chr6.3:29308271-29308290 | MS.gene80413:CDS | 50.0% | |
| CTCCGGTTCAGTTATTTGGG+AGG | - | chr6.3:29305252-29305271 | None:intergenic | 50.0% | |
| GACGCTAGCGGCAAAAGTTA+TGG | + | chr6.3:29303802-29303821 | MS.gene80413:intron | 50.0% | |
| GAGCAAGGTTGAGTCGTATG+AGG | - | chr6.3:29303951-29303970 | None:intergenic | 50.0% | |
| GAGGACTTCACACTAGCAGA+TGG | - | chr6.3:29308394-29308413 | None:intergenic | 50.0% | |
| GAGGGCCAACTGAAGTACAA+TGG | + | chr6.3:29307534-29307553 | MS.gene80413:CDS | 50.0% | |
| GATTGTGGGGACTGATTGTG+GGG | - | chr6.3:29303920-29303939 | None:intergenic | 50.0% | |
| GCAAGTTTCGCCGGTGAAAT+CGG | - | chr6.3:29304154-29304173 | None:intergenic | 50.0% | |
| GCAATGACCTCCTCAACGTA+AGG | - | chr6.3:29305510-29305529 | None:intergenic | 50.0% | |
| GCCGTTTGCGATTTGCATCT+AGG | + | chr6.3:29304285-29304304 | MS.gene80413:intron | 50.0% | |
| GGAACGTTCGCCGATGAAAT+CGG | - | chr6.3:29304028-29304047 | None:intergenic | 50.0% | |
| GGGTCATCCAACTGAGAAAC+GGG | + | chr6.3:29307622-29307641 | MS.gene80413:CDS | 50.0% | |
| GGTGGCAGCTTATGACACTA+AGG | + | chr6.3:29308150-29308169 | MS.gene80413:intron | 50.0% | |
| GTGTCCCACCCTGATTTCAA+CGG | - | chr6.3:29304921-29304940 | None:intergenic | 50.0% | |
| GTTGGCCCTCCATAATGCAT+AGG | - | chr6.3:29307524-29307543 | None:intergenic | 50.0% | |
| TCAGGCCATTGTGACCTGAA+AGG | + | chr6.3:29302273-29302292 | MS.gene80413:intron | 50.0% | |
| TCCAGGATTGCCTTACGTTG+AGG | + | chr6.3:29305497-29305516 | MS.gene80413:CDS | 50.0% | |
| TCCTCAACGTAAGGCAATCC+TGG | - | chr6.3:29305501-29305520 | None:intergenic | 50.0% | |
| TCTCCAAAACCCGATGTCGT+AGG | + | chr6.3:29306789-29306808 | MS.gene80413:intron | 50.0% | |
| TGAAGCTGGGAAAACAGCAG+AGG | + | chr6.3:29308285-29308304 | MS.gene80413:CDS | 50.0% | |
| TGGGCGTATCATTGAGAGAG+TGG | + | chr6.3:29303755-29303774 | MS.gene80413:intron | 50.0% | |
| TGTCCCACCCTGATTTCAAC+GGG | - | chr6.3:29304920-29304939 | None:intergenic | 50.0% | |
| TGTGACCTGAAAGGGACCAT+TGG | + | chr6.3:29302282-29302301 | MS.gene80413:intron | 50.0% | |
| TTAGGGTGGCACAAAGGTGA+AGG | - | chr6.3:29304049-29304068 | None:intergenic | 50.0% | |
| ! | ATGCACCGGGTAACTGGTTT+AGG | + | chr6.3:29303096-29303115 | MS.gene80413:intron | 50.0% |
| ! | CAATTTCACCGGCTACGTCA+CGG | + | chr6.3:29304118-29304137 | MS.gene80413:CDS | 50.0% |
| ! | GAACCTACGACATCGGGTTT+TGG | - | chr6.3:29306795-29306814 | None:intergenic | 50.0% |
| ! | GCAAAGGCACGGATAAATGC+AGG | + | chr6.3:29307560-29307579 | MS.gene80413:CDS | 50.0% |
| ! | GCCCAAGCATTGTTGTTGAC+TGG | - | chr6.3:29302334-29302353 | None:intergenic | 50.0% |
| ! | GGGTCTGAGGTGAGAACTAT+AGG | - | chr6.3:29303900-29303919 | None:intergenic | 50.0% |
| ! | TAGATCCGGAGGCATAGATC+CGG | + | chr6.3:29308231-29308250 | MS.gene80413:CDS | 50.0% |
| ! | TGGTCCCTTTCAGGTCACAA+TGG | - | chr6.3:29302281-29302300 | None:intergenic | 50.0% |
| !! | AATGATGGGCGAGTGTCACT+AGG | - | chr6.3:29303042-29303061 | None:intergenic | 50.0% |
| !! | AGATGTGTGGTTGGTGGGTT+TGG | + | chr6.3:29303564-29303583 | MS.gene80413:intron | 50.0% |
| !! | TAGACGGTGTCACGGAAGAT+GGG | - | chr6.3:29308342-29308361 | None:intergenic | 50.0% |
| !! | TCACTGGTTCATGGTGAGAG+TGG | + | chr6.3:29304837-29304856 | MS.gene80413:intron | 50.0% |
| !! | TTAGACGGTGTCACGGAAGA+TGG | - | chr6.3:29308343-29308362 | None:intergenic | 50.0% |
| !! | TTTTCCGGTTGATTCACGGC+GGG | + | chr6.3:29303996-29304015 | MS.gene80413:CDS | 50.0% |
| !!! | GCTTGGTAGCGCGTTTGTTT+TGG | + | chr6.3:29306547-29306566 | MS.gene80413:intron | 50.0% |
| ACTCCCCGTTGAAATCAGGG+TGG | + | chr6.3:29304913-29304932 | MS.gene80413:intron | 55.0% | |
| ATGCACATGCACCGGGTAAC+TGG | + | chr6.3:29303090-29303109 | MS.gene80413:intron | 55.0% | |
| ATTGTTGGTCGTGATCCCGC+TGG | + | chr6.3:29307596-29307615 | MS.gene80413:CDS | 55.0% | |
| CAATCCCGCCGTGAATCAAC+CGG | - | chr6.3:29304003-29304022 | None:intergenic | 55.0% | |
| CGTGACGTAGCCGGTGAAAT+TGG | - | chr6.3:29304120-29304139 | None:intergenic | 55.0% | |
| CTATGTATCAGCCGTCCCAG+AGG | - | chr6.3:29303590-29303609 | None:intergenic | 55.0% | |
| CTCCCCGTTGAAATCAGGGT+GGG | + | chr6.3:29304914-29304933 | MS.gene80413:intron | 55.0% | |
| CTGGGACGGCTGATACATAG+CGG | + | chr6.3:29303590-29303609 | MS.gene80413:intron | 55.0% | |
| GCAAATCGCAAACGGCAAGC+AGG | - | chr6.3:29304281-29304300 | None:intergenic | 55.0% | |
| GTCCCACCCTGATTTCAACG+GGG | - | chr6.3:29304919-29304938 | None:intergenic | 55.0% | |
| GTTGGATGACCCATACCAGC+GGG | - | chr6.3:29307614-29307633 | None:intergenic | 55.0% | |
| TACGTCGGACCGGCAAGAAA+GGG | - | chr6.3:29304325-29304344 | None:intergenic | 55.0% | |
| TGATACATAGCGGTGGCCGA+TGG | + | chr6.3:29303600-29303619 | MS.gene80413:intron | 55.0% | |
| ! | AAGGTGCTTAGCATGGCTCC+TGG | + | chr6.3:29307671-29307690 | MS.gene80413:CDS | 55.0% |
| ! | CACCGGCGAAACTTGCTTCA+CGG | + | chr6.3:29304158-29304177 | MS.gene80413:CDS | 55.0% |
| ! | TGTTGTTGACTGGGTCTGCG+AGG | - | chr6.3:29302324-29302343 | None:intergenic | 55.0% |
| !! | CGGGATTGCGCCGATTTCAT+CGG | + | chr6.3:29304015-29304034 | MS.gene80413:CDS | 55.0% |
| !! | CGTGATTGCGCCGATTTCAC+CGG | + | chr6.3:29304141-29304160 | MS.gene80413:CDS | 55.0% |
| !! | TGTGGGTTAGGGTGGCACAA+AGG | - | chr6.3:29304055-29304074 | None:intergenic | 55.0% |
| ACCTGGGGAACAACTGCTCC+AGG | + | chr6.3:29305480-29305499 | MS.gene80413:CDS | 60.0% | |
| CAATCACGCCGTGACGTAGC+CGG | - | chr6.3:29304129-29304148 | None:intergenic | 60.0% | |
| CTACGTCGGACCGGCAAGAA+AGG | - | chr6.3:29304326-29304345 | None:intergenic | 60.0% | |
| GAGGAGGTCATTGCTCCAGC+TGG | + | chr6.3:29305516-29305535 | MS.gene80413:CDS | 60.0% | |
| GCCGGAAAACTACGTCGGAC+CGG | - | chr6.3:29304335-29304354 | None:intergenic | 60.0% | |
| GGACGGCTGATACATAGCGG+TGG | + | chr6.3:29303593-29303612 | MS.gene80413:intron | 60.0% | |
| GGCTAAGCGGTTGACGCTAG+CGG | + | chr6.3:29303790-29303809 | MS.gene80413:intron | 60.0% | |
| GGGACTGATTGTGGGGTCTG+AGG | - | chr6.3:29303913-29303932 | None:intergenic | 60.0% | |
| GGTCGTGATCCCGCTGGTAT+GGG | + | chr6.3:29307602-29307621 | MS.gene80413:CDS | 60.0% | |
| TCCTGGAGCAGTTGTTCCCC+AGG | - | chr6.3:29305484-29305503 | None:intergenic | 60.0% | |
| TGCCTCCGGATCTATGCCTC+CGG | - | chr6.3:29308239-29308258 | None:intergenic | 60.0% | |
| TGGTCGTGATCCCGCTGGTA+TGG | + | chr6.3:29307601-29307620 | MS.gene80413:CDS | 60.0% | |
| ! | ATCCGGAGGCATAGATCCGG+AGG | + | chr6.3:29308234-29308253 | MS.gene80413:CDS | 60.0% |
| ! | GCCGGTCCGACGTAGTTTTC+CGG | + | chr6.3:29304331-29304350 | MS.gene80413:intron | 60.0% |
| ! | TGTTGACTGGGTCTGCGAGG+TGG | - | chr6.3:29302321-29302340 | None:intergenic | 60.0% |
| !! | GGTTGGTGGGTTTGGCCTCT+GGG | + | chr6.3:29303572-29303591 | MS.gene80413:intron | 60.0% |
| !! | TGGTTGGTGGGTTTGGCCTC+TGG | + | chr6.3:29303571-29303590 | MS.gene80413:intron | 60.0% |
| GGGGCGGAATCACGCTCTGT+AGG | - | chr6.3:29306822-29306841 | None:intergenic | 65.0% | |
| GGTCTGCGAGGTGGTCAGCA+AGG | - | chr6.3:29302312-29302331 | None:intergenic | 65.0% | |
| ! | GGTGGGTTTGGCCTCTGGGA+CGG | + | chr6.3:29303576-29303595 | MS.gene80413:intron | 65.0% |
| GTTACGGTGGCGCGCGAGCA+AGG | - | chr6.3:29303966-29303985 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 29302233 | 29308809 | 29302233 | ID=MS.gene80413 |
| chr6.3 | mRNA | 29302233 | 29308809 | 29302233 | ID=MS.gene80413.t1;Parent=MS.gene80413 |
| chr6.3 | exon | 29302233 | 29302239 | 29302233 | ID=MS.gene80413.t1.exon1;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29302233 | 29302239 | 29302233 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29302329 | 29302380 | 29302329 | ID=MS.gene80413.t1.exon2;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29302329 | 29302380 | 29302329 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29303904 | 29304257 | 29303904 | ID=MS.gene80413.t1.exon3;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29303904 | 29304257 | 29303904 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29305437 | 29305842 | 29305437 | ID=MS.gene80413.t1.exon4;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29305437 | 29305842 | 29305437 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29307464 | 29307724 | 29307464 | ID=MS.gene80413.t1.exon5;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29307464 | 29307724 | 29307464 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29308151 | 29308381 | 29308151 | ID=MS.gene80413.t1.exon6;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29308151 | 29308381 | 29308151 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| chr6.3 | exon | 29308801 | 29308809 | 29308801 | ID=MS.gene80413.t1.exon7;Parent=MS.gene80413.t1 |
| chr6.3 | CDS | 29308801 | 29308809 | 29308801 | ID=cds.MS.gene80413.t1;Parent=MS.gene80413.t1 |
| Gene Sequence |
| Protein sequence |
