Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86392.t1 | XP_003597891.1 | 99.3 | 147 | 1 | 0 | 139 | 285 | 1 | 147 | 5.10E-78 | 301.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86392.t1 | C0HLF1 | 31.9 | 144 | 96 | 2 | 139 | 280 | 1 | 144 | 4.7e-16 | 86.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86392.t1 | Q2HUA7 | 99.3 | 147 | 1 | 0 | 139 | 285 | 1 | 147 | 3.6e-78 | 301.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049140 | MS.gene86392 | 0.831947 | 1.25E-55 | -1.69E-46 |
| MS.gene049580 | MS.gene86392 | 0.853534 | 2.24E-61 | -1.69E-46 |
| MS.gene049653 | MS.gene86392 | 0.80383 | 2.89E-49 | -1.69E-46 |
| MS.gene050277 | MS.gene86392 | 0.884123 | 2.51E-71 | -1.69E-46 |
| MS.gene050288 | MS.gene86392 | 0.819342 | 1.22E-52 | -1.69E-46 |
| MS.gene050317 | MS.gene86392 | 0.801566 | 8.48E-49 | -1.69E-46 |
| MS.gene050320 | MS.gene86392 | 0.863316 | 2.71E-64 | -1.69E-46 |
| MS.gene050437 | MS.gene86392 | 0.815113 | 1.09E-51 | -1.69E-46 |
| MS.gene050752 | MS.gene86392 | 0.86278 | 3.98E-64 | -1.69E-46 |
| MS.gene050838 | MS.gene86392 | 0.841432 | 4.77E-58 | -1.69E-46 |
| MS.gene050955 | MS.gene86392 | 0.849311 | 3.51E-60 | -1.69E-46 |
| MS.gene051003 | MS.gene86392 | 0.80791 | 4.01E-50 | -1.69E-46 |
| MS.gene051033 | MS.gene86392 | -0.809042 | 2.30E-50 | -1.69E-46 |
| MS.gene051063 | MS.gene86392 | 0.857865 | 1.22E-62 | -1.69E-46 |
| MS.gene051245 | MS.gene86392 | 0.857462 | 1.61E-62 | -1.69E-46 |
| MS.gene051330 | MS.gene86392 | 0.853605 | 2.14E-61 | -1.69E-46 |
| MS.gene05134 | MS.gene86392 | 0.825583 | 4.33E-54 | -1.69E-46 |
| MS.gene051451 | MS.gene86392 | 0.800452 | 1.43E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene86392 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene051746 | MS.gene86392 | 0.88595 | 5.22E-72 | -1.69E-46 |
| MS.gene051748 | MS.gene86392 | 0.887855 | 9.89E-73 | -1.69E-46 |
| MS.gene051756 | MS.gene86392 | 0.868257 | 7.47E-66 | -1.69E-46 |
| MS.gene051757 | MS.gene86392 | 0.811871 | 5.64E-51 | -1.69E-46 |
| MS.gene051903 | MS.gene86392 | 0.926228 | 6.25E-91 | -1.69E-46 |
| MS.gene052286 | MS.gene86392 | 0.824084 | 9.78E-54 | -1.69E-46 |
| MS.gene052302 | MS.gene86392 | 0.836893 | 7.16E-57 | -1.69E-46 |
| MS.gene052376 | MS.gene86392 | 0.820224 | 7.68E-53 | -1.69E-46 |
| MS.gene052479 | MS.gene86392 | 0.827017 | 1.97E-54 | -1.69E-46 |
| MS.gene052818 | MS.gene86392 | -0.841068 | 5.95E-58 | -1.69E-46 |
| MS.gene052947 | MS.gene86392 | 0.89078 | 7.23E-74 | -1.69E-46 |
| MS.gene053109 | MS.gene86392 | 0.845942 | 2.96E-59 | -1.69E-46 |
| MS.gene053952 | MS.gene86392 | 0.84361 | 1.26E-58 | -1.69E-46 |
| MS.gene054403 | MS.gene86392 | 0.864097 | 1.55E-64 | -1.69E-46 |
| MS.gene054536 | MS.gene86392 | 0.807545 | 4.80E-50 | -1.69E-46 |
| MS.gene054699 | MS.gene86392 | 0.813536 | 2.44E-51 | -1.69E-46 |
| MS.gene05469 | MS.gene86392 | 0.837674 | 4.52E-57 | -1.69E-46 |
| MS.gene055162 | MS.gene86392 | 0.814263 | 1.68E-51 | -1.69E-46 |
| MS.gene055174 | MS.gene86392 | 0.817628 | 2.99E-52 | -1.69E-46 |
| MS.gene055424 | MS.gene86392 | 0.839817 | 1.26E-57 | -1.69E-46 |
| MS.gene055441 | MS.gene86392 | 0.802642 | 5.09E-49 | -1.69E-46 |
| MS.gene055555 | MS.gene86392 | 0.846201 | 2.52E-59 | -1.69E-46 |
| MS.gene055603 | MS.gene86392 | 0.805619 | 1.22E-49 | -1.69E-46 |
| MS.gene056075 | MS.gene86392 | 0.828497 | 8.70E-55 | -1.69E-46 |
| MS.gene056091 | MS.gene86392 | 0.808364 | 3.21E-50 | -1.69E-46 |
| MS.gene056580 | MS.gene86392 | 0.812301 | 4.54E-51 | -1.69E-46 |
| MS.gene056601 | MS.gene86392 | 0.828864 | 7.09E-55 | -1.69E-46 |
| MS.gene056631 | MS.gene86392 | 0.88204 | 1.45E-70 | -1.69E-46 |
| MS.gene056830 | MS.gene86392 | -0.801746 | 7.78E-49 | -1.69E-46 |
| MS.gene056986 | MS.gene86392 | 0.823414 | 1.40E-53 | -1.69E-46 |
| MS.gene057057 | MS.gene86392 | 0.842436 | 2.59E-58 | -1.69E-46 |
| MS.gene057079 | MS.gene86392 | 0.827426 | 1.58E-54 | -1.69E-46 |
| MS.gene057094 | MS.gene86392 | 0.86985 | 2.27E-66 | -1.69E-46 |
| MS.gene057140 | MS.gene86392 | 0.826432 | 2.72E-54 | -1.69E-46 |
| MS.gene057234 | MS.gene86392 | 0.888299 | 6.68E-73 | -1.69E-46 |
| MS.gene057452 | MS.gene86392 | -0.805862 | 1.09E-49 | -1.69E-46 |
| MS.gene057705 | MS.gene86392 | 0.858173 | 9.88E-63 | -1.69E-46 |
| MS.gene05781 | MS.gene86392 | 0.824725 | 6.91E-54 | -1.69E-46 |
| MS.gene05795 | MS.gene86392 | 0.827643 | 1.40E-54 | -1.69E-46 |
| MS.gene057999 | MS.gene86392 | 0.866478 | 2.77E-65 | -1.69E-46 |
| MS.gene058054 | MS.gene86392 | 0.804554 | 2.04E-49 | -1.69E-46 |
| MS.gene058055 | MS.gene86392 | 0.842515 | 2.47E-58 | -1.69E-46 |
| MS.gene058074 | MS.gene86392 | 0.847865 | 8.82E-60 | -1.69E-46 |
| MS.gene058238 | MS.gene86392 | 0.885133 | 1.06E-71 | -1.69E-46 |
| MS.gene058654 | MS.gene86392 | 0.800861 | 1.18E-48 | -1.69E-46 |
| MS.gene058906 | MS.gene86392 | 0.863106 | 3.15E-64 | -1.69E-46 |
| MS.gene059171 | MS.gene86392 | 0.80484 | 1.78E-49 | -1.69E-46 |
| MS.gene059227 | MS.gene86392 | 0.817409 | 3.35E-52 | -1.69E-46 |
| MS.gene059898 | MS.gene86392 | 0.859076 | 5.31E-63 | -1.69E-46 |
| MS.gene06001 | MS.gene86392 | 0.890772 | 7.28E-74 | -1.69E-46 |
| MS.gene06011 | MS.gene86392 | 0.856797 | 2.52E-62 | -1.69E-46 |
| MS.gene060297 | MS.gene86392 | 0.810187 | 1.31E-50 | -1.69E-46 |
| MS.gene060586 | MS.gene86392 | 0.844825 | 5.95E-59 | -1.69E-46 |
| MS.gene060763 | MS.gene86392 | 0.830148 | 3.46E-55 | -1.69E-46 |
| MS.gene060917 | MS.gene86392 | 0.804688 | 1.92E-49 | -1.69E-46 |
| MS.gene061145 | MS.gene86392 | 0.806112 | 9.64E-50 | -1.69E-46 |
| MS.gene06118 | MS.gene86392 | 0.849264 | 3.61E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86392.t1 | MTR_2g103690 | 99.320 | 147 | 1 | 0 | 139 | 285 | 1 | 147 | 5.51e-105 | 302 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene86392.t1 | AT1G15370 | 87.671 | 146 | 18 | 0 | 139 | 284 | 1 | 146 | 3.22e-92 | 270 |
Find 56 sgRNAs with CRISPR-Local
Find 296 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGAACTTTCATTCTTCTT+AGG | 0.204039 | 2.3:+1379995 | MS.gene86392:CDS |
| CCTACACTGGCGTTCTTTCT+TGG | 0.246824 | 2.3:+1382952 | MS.gene86392:CDS |
| TAAAGGGTATCTCAGTAATT+TGG | 0.251980 | 2.3:+1381422 | MS.gene86392:CDS |
| CGCCGTTTCCTTGATAAGTA+TGG | 0.286828 | 2.3:+1384942 | MS.gene86392:CDS |
| AGCTTTGAGTTTGTTTCTGA+TGG | 0.352682 | 2.3:-1380124 | None:intergenic |
| ACTAGGAGCTGATAATCTTA+AGG | 0.380283 | 2.3:+1382979 | MS.gene86392:CDS |
| CAAGGAAACGGCGCTCAGTT+GGG | 0.381526 | 2.3:-1384932 | None:intergenic |
| TGGAAGAATTTGCTTGTGTT+TGG | 0.393493 | 2.3:+1384962 | MS.gene86392:CDS |
| AAGTGAATTCCACAATGTTC+AGG | 0.415270 | 2.3:+1380170 | MS.gene86392:CDS |
| CAGTGTAGGCGCTCCTCTGC+AGG | 0.428518 | 2.3:-1382938 | None:intergenic |
| TACAATAACCTCAGCTGTAA+AGG | 0.434603 | 2.3:+1384893 | MS.gene86392:CDS |
| CGTTCTTTCTTGGTCAAACT+AGG | 0.434756 | 2.3:+1382962 | MS.gene86392:CDS |
| CTAGGAGCTGATAATCTTAA+GGG | 0.435141 | 2.3:+1382980 | MS.gene86392:CDS |
| GAAGGGATATCTGGAAAATA+CGG | 0.437154 | 2.3:+1385476 | MS.gene86392:intron |
| CACAATGTTCAGGCAAATTG+TGG | 0.440979 | 2.3:+1380180 | MS.gene86392:CDS |
| GGAGTTTGAAATGACTGATC+TGG | 0.442213 | 2.3:+1379973 | None:intergenic |
| CTCACTAAATAGCATATGTT+TGG | 0.443368 | 2.3:-1380232 | None:intergenic |
| AAATTCTTCCATACTTATCA+AGG | 0.445192 | 2.3:-1384950 | None:intergenic |
| TGTGTTTGGATGAAATTGTA+TGG | 0.456773 | 2.3:+1384976 | MS.gene86392:CDS |
| ACTTTCATTCTTCTTAGGAA+TGG | 0.461465 | 2.3:+1380000 | MS.gene86392:CDS |
| TCAAGGAAACGGCGCTCAGT+TGG | 0.462763 | 2.3:-1384933 | None:intergenic |
| TTCCATACTTATCAAGGAAA+CGG | 0.477616 | 2.3:-1384944 | None:intergenic |
| CTTACTTGTGGCAAGCAACT+AGG | 0.484838 | 2.3:-1383021 | None:intergenic |
| ATCAGAAACAAACTCAAAGC+TGG | 0.487432 | 2.3:+1380126 | MS.gene86392:CDS |
| GTATCTCAGTAATTTGGAAC+AGG | 0.490425 | 2.3:+1381428 | MS.gene86392:CDS |
| GAATTTGTGAAATTGAAAGC+TGG | 0.497702 | 2.3:+1380022 | MS.gene86392:CDS |
| AAGGAAACGGCGCTCAGTTG+GGG | 0.501938 | 2.3:-1384931 | None:intergenic |
| GAGGATATTGCCCTCGGCGT+TGG | 0.506903 | 2.3:-1381529 | None:intergenic |
| ATTACACTTAATTATGTCAA+AGG | 0.508092 | 2.3:-1381376 | None:intergenic |
| CTCATTCAAAACTCAGTAGG+AGG | 0.512002 | 2.3:-1385534 | None:intergenic |
| ATAGAATCAAGAGATTGATA+AGG | 0.521125 | 2.3:+1385505 | MS.gene86392:CDS |
| CACAATTTGCCTGAACATTG+TGG | 0.524607 | 2.3:-1380179 | None:intergenic |
| ACAATGTTCAGGCAAATTGT+GGG | 0.526658 | 2.3:+1380181 | MS.gene86392:CDS |
| GATGTCAGTATATACGTTGT+GGG | 0.529870 | 2.3:+1383651 | MS.gene86392:CDS |
| TTTCTCATTCAAAACTCAGT+AGG | 0.534349 | 2.3:-1385537 | None:intergenic |
| TCAGCTGTAAAGGATGTATG+TGG | 0.535855 | 2.3:+1384903 | MS.gene86392:CDS |
| TATATTGTATACACAGTACT+TGG | 0.537335 | 2.3:+1383627 | MS.gene86392:CDS |
| CAGTATATACGTTGTGGGGA+AGG | 0.538675 | 2.3:+1383656 | MS.gene86392:CDS |
| TGAGGTATCTGTGTAATAGC+AGG | 0.541048 | 2.3:+1380209 | MS.gene86392:CDS |
| CTGCAGAGGAGCGCCTACAC+TGG | 0.552563 | 2.3:+1382939 | MS.gene86392:CDS |
| TTTGGATGAAATTGTATGGA+AGG | 0.577163 | 2.3:+1384980 | MS.gene86392:CDS |
| GAGTTTGAAATGACTGATCT+GGG | 0.582919 | 2.3:+1379974 | None:intergenic |
| TTCGATGAGGATATTGCCCT+CGG | 0.588896 | 2.3:-1381535 | None:intergenic |
| AGATGTCAGTATATACGTTG+TGG | 0.591952 | 2.3:+1383650 | MS.gene86392:CDS |
| TCAAACTCAACCTTGCTCAC+CGG | 0.594243 | 2.3:-1381465 | None:intergenic |
| CCAAGAAAGAACGCCAGTGT+AGG | 0.602222 | 2.3:-1382952 | None:intergenic |
| ATGTCAGTATATACGTTGTG+GGG | 0.608096 | 2.3:+1383652 | MS.gene86392:CDS |
| GCTGGATGAATGCATTGAAG+AGG | 0.610078 | 2.3:+1380144 | MS.gene86392:CDS |
| AGGAAACGGCGCTCAGTTGG+GGG | 0.618275 | 2.3:-1384930 | None:intergenic |
| ACATACATCCTTTACAGCTG+AGG | 0.624977 | 2.3:-1384901 | None:intergenic |
| CAGCTGTAAAGGATGTATGT+GGG | 0.637321 | 2.3:+1384904 | MS.gene86392:CDS |
| ATGTATCAGCAGAAATACAT+TGG | 0.647194 | 2.3:+1380052 | MS.gene86392:CDS |
| AGTGTACTCACCGTTCGATG+AGG | 0.647564 | 2.3:-1381548 | None:intergenic |
| GGCAAATTGTGGGATCTCTG+AGG | 0.662974 | 2.3:+1380191 | MS.gene86392:CDS |
| AAAACGGAATATGATCCTTG+CGG | 0.685453 | 2.3:+1381497 | MS.gene86392:CDS |
| AGGGCAATATCCTCATCGAA+CGG | 0.685734 | 2.3:+1381538 | MS.gene86392:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAAAAATGTATAAATAAA+GGG | + | chr2.3:1380772-1380791 | MS.gene86392:intron | 10.0% |
| !! | ATTATCATTAATGAAAAATT+TGG | + | chr2.3:1383356-1383375 | MS.gene86392:intron | 10.0% |
| !! | TAAGAAAAATGTATAAATAA+AGG | + | chr2.3:1380771-1380790 | MS.gene86392:intron | 10.0% |
| !! | TGAAAAAGAAAATATATAAA+GGG | + | chr2.3:1381406-1381425 | MS.gene86392:CDS | 10.0% |
| !! | TTAAATTTATTCAAATAAGA+CGG | - | chr2.3:1385246-1385265 | None:intergenic | 10.0% |
| !! | TTGAAAAAGAAAATATATAA+AGG | + | chr2.3:1381405-1381424 | MS.gene86392:CDS | 10.0% |
| !! | AAAATTGTGTCAATTAAATT+GGG | - | chr2.3:1380736-1380755 | None:intergenic | 15.0% |
| !! | AATAAAAAGATGATAAAATG+AGG | - | chr2.3:1381617-1381636 | None:intergenic | 15.0% |
| !! | ACATATTTAATCAAAAAACA+AGG | + | chr2.3:1384677-1384696 | MS.gene86392:intron | 15.0% |
| !! | AGAAAAATGTATAAATAAAG+GGG | + | chr2.3:1380773-1380792 | MS.gene86392:intron | 15.0% |
| !! | ATTTAGTGTTATATTGTATT+GGG | + | chr2.3:1380837-1380856 | MS.gene86392:intron | 15.0% |
| !! | TATCCTATTAGAAATAAATA+GGG | + | chr2.3:1383922-1383941 | MS.gene86392:intron | 15.0% |
| !! | TATTTAGTGTTATATTGTAT+TGG | + | chr2.3:1380836-1380855 | MS.gene86392:intron | 15.0% |
| !! | TTAAATATGTATACTATTCT+TGG | - | chr2.3:1384667-1384686 | None:intergenic | 15.0% |
| !!! | GTTTGAAATTTTGATTATAT+TGG | + | chr2.3:1381680-1381699 | MS.gene86392:intron | 15.0% |
| !!! | TTTTTTTTGTTTTGAAAACT+CGG | + | chr2.3:1382571-1382590 | MS.gene86392:intron | 15.0% |
| !! | AAAATGTATCATGTATAATC+TGG | - | chr2.3:1382012-1382031 | None:intergenic | 20.0% |
| !! | AAATGTTGTTAGAAAGTAAA+TGG | + | chr2.3:1382793-1382812 | MS.gene86392:intron | 20.0% |
| !! | AACAAACAAAATGACAATAA+TGG | - | chr2.3:1381188-1381207 | None:intergenic | 20.0% |
| !! | AATAACTAAAATTTAGTCCT+TGG | - | chr2.3:1383162-1383181 | None:intergenic | 20.0% |
| !! | ATAAATCACTGTTTACTAAA+AGG | - | chr2.3:1383570-1383589 | None:intergenic | 20.0% |
| !! | ATGAAAACAACTTAAGATTT+AGG | - | chr2.3:1381752-1381771 | None:intergenic | 20.0% |
| !! | ATTACACTTAATTATGTCAA+AGG | - | chr2.3:1381379-1381398 | None:intergenic | 20.0% |
| !! | CAAAATTGTGTCAATTAAAT+TGG | - | chr2.3:1380737-1380756 | None:intergenic | 20.0% |
| !! | GTATCCTATTAGAAATAAAT+AGG | + | chr2.3:1383921-1383940 | MS.gene86392:intron | 20.0% |
| !! | TAAATCACTGTTTACTAAAA+GGG | - | chr2.3:1383569-1383588 | None:intergenic | 20.0% |
| !! | TAACAAAAGATAAAATGAAG+TGG | - | chr2.3:1381844-1381863 | None:intergenic | 20.0% |
| !! | TGAAAACAACTTAAGATTTA+GGG | - | chr2.3:1381751-1381770 | None:intergenic | 20.0% |
| !! | TTATTAGAATTCTATTTGCA+AGG | + | chr2.3:1383177-1383196 | MS.gene86392:intron | 20.0% |
| !! | TTCATATAAACAGATTTCAA+CGG | - | chr2.3:1383211-1383230 | None:intergenic | 20.0% |
| !!! | ATGTGTTGATTATATTTTGT+TGG | + | chr2.3:1384230-1384249 | MS.gene86392:intron | 20.0% |
| !!! | ATTATGACCTATTTAGATTT+TGG | - | chr2.3:1381348-1381367 | None:intergenic | 20.0% |
| !!! | ATTTATTTCTAATAGGATAC+AGG | - | chr2.3:1383921-1383940 | None:intergenic | 20.0% |
| !!! | CAATCTTTTTTATTTGATGA+CGG | + | chr2.3:1383717-1383736 | MS.gene86392:intron | 20.0% |
| !!! | GACACTTTTATTTAGAAAAT+GGG | + | chr2.3:1380906-1380925 | MS.gene86392:intron | 20.0% |
| !!! | GACATAATTTTCAAAAATGA+AGG | - | chr2.3:1383521-1383540 | None:intergenic | 20.0% |
| !!! | TTGTTATTTAAGAGAGAATT+GGG | - | chr2.3:1384016-1384035 | None:intergenic | 20.0% |
| !!! | TTTATTTCTAATAGGATACA+GGG | - | chr2.3:1383920-1383939 | None:intergenic | 20.0% |
| ! | AAAAATTTGGAAAAGAGTTG+TGG | + | chr2.3:1383369-1383388 | MS.gene86392:intron | 25.0% |
| ! | AAATATCAGAGAATACACTA+TGG | + | chr2.3:1382542-1382561 | MS.gene86392:intron | 25.0% |
| ! | AAATTCTTCCATACTTATCA+AGG | - | chr2.3:1384953-1384972 | None:intergenic | 25.0% |
| ! | ACATGAACCAAAATCTAAAT+AGG | + | chr2.3:1381338-1381357 | MS.gene86392:intron | 25.0% |
| ! | AGCATTCTATCTTTGTAATT+GGG | - | chr2.3:1383954-1383973 | None:intergenic | 25.0% |
| ! | AGTTTGATATCAGAGAAAAA+CGG | + | chr2.3:1381481-1381500 | MS.gene86392:CDS | 25.0% |
| ! | ATAGAATCAAGAGATTGATA+AGG | + | chr2.3:1385505-1385524 | MS.gene86392:CDS | 25.0% |
| ! | ATATTCAGCAGTTATGATTA+AGG | + | chr2.3:1380378-1380397 | MS.gene86392:intron | 25.0% |
| ! | ATGGATAAATTACCTTATCT+AGG | + | chr2.3:1383102-1383121 | MS.gene86392:intron | 25.0% |
| ! | ATTTCTCTTTAATCAGATTG+AGG | + | chr2.3:1382466-1382485 | MS.gene86392:intron | 25.0% |
| ! | CAAAATATAATCAACACATC+AGG | - | chr2.3:1384229-1384248 | None:intergenic | 25.0% |
| ! | CATAAAATGATGTTTCTCTA+AGG | - | chr2.3:1385088-1385107 | None:intergenic | 25.0% |
| ! | CGTCATCAAATAAAAAAGAT+TGG | - | chr2.3:1383719-1383738 | None:intergenic | 25.0% |
| ! | CTAAGGTAAGTAAAATGAAT+GGG | - | chr2.3:1385071-1385090 | None:intergenic | 25.0% |
| ! | GATGATAAACTAGCTATTAA+AGG | + | chr2.3:1384510-1384529 | MS.gene86392:intron | 25.0% |
| ! | GTATGAATGTATATCTTACA+TGG | + | chr2.3:1383083-1383102 | MS.gene86392:intron | 25.0% |
| ! | TAGCATTCTATCTTTGTAAT+TGG | - | chr2.3:1383955-1383974 | None:intergenic | 25.0% |
| ! | TATATTGTATACACAGTACT+TGG | + | chr2.3:1383627-1383646 | MS.gene86392:CDS | 25.0% |
| ! | TATTCAGCAGTTATGATTAA+GGG | + | chr2.3:1380379-1380398 | MS.gene86392:intron | 25.0% |
| ! | TCTGATATTTATTGTATCAC+TGG | - | chr2.3:1382532-1382551 | None:intergenic | 25.0% |
| ! | TTCTACTTCTTATCTTTATC+AGG | + | chr2.3:1383598-1383617 | MS.gene86392:intron | 25.0% |
| ! | TTGACATATTTGAATTCTTG+AGG | + | chr2.3:1380336-1380355 | MS.gene86392:intron | 25.0% |
| ! | TTGCCTATAAATAACAAAAG+TGG | - | chr2.3:1384057-1384076 | None:intergenic | 25.0% |
| ! | TTTCTCTATCGCAATTAAAA+GGG | + | chr2.3:1382713-1382732 | MS.gene86392:intron | 25.0% |
| ! | TTTCTCTTTAATCAGATTGA+GGG | + | chr2.3:1382467-1382486 | MS.gene86392:intron | 25.0% |
| !! | AAAATGAAGTGGAATTGTTT+TGG | - | chr2.3:1381833-1381852 | None:intergenic | 25.0% |
| !! | AAGTTTTGCATGAAAATATG+GGG | - | chr2.3:1385312-1385331 | None:intergenic | 25.0% |
| !! | AATTTTACTTTGTATGTGAG+TGG | - | chr2.3:1382771-1382790 | None:intergenic | 25.0% |
| !! | AGTTCTGATAATCAAAAAGT+TGG | - | chr2.3:1382882-1382901 | None:intergenic | 25.0% |
| !! | ATCTTTTACTAAACATTGTC+CGG | - | chr2.3:1385018-1385037 | None:intergenic | 25.0% |
| !! | CAAGTTTTGCATGAAAATAT+GGG | - | chr2.3:1385313-1385332 | None:intergenic | 25.0% |
| !! | CTAGTTTATCATCTTTTCTA+GGG | - | chr2.3:1384503-1384522 | None:intergenic | 25.0% |
| !! | GAAGCTTTAATAAAATACCT+TGG | - | chr2.3:1382444-1382463 | None:intergenic | 25.0% |
| !! | TCTAAGGTAAGTAAAATGAA+TGG | - | chr2.3:1385072-1385091 | None:intergenic | 25.0% |
| !! | TGTTATTTAAGAGAGAATTG+GGG | - | chr2.3:1384015-1384034 | None:intergenic | 25.0% |
| !! | TTGAAATGAGTCAGTTATTT+TGG | + | chr2.3:1380883-1380902 | MS.gene86392:intron | 25.0% |
| !! | TTTTCTCTATCGCAATTAAA+AGG | + | chr2.3:1382712-1382731 | MS.gene86392:intron | 25.0% |
| !!! | ATCTGTTACTGATTTTTGAT+GGG | - | chr2.3:1383428-1383447 | None:intergenic | 25.0% |
| !!! | CTTGTTATTTAAGAGAGAAT+TGG | - | chr2.3:1384017-1384036 | None:intergenic | 25.0% |
| !!! | GCTATTATCATATTAGTCTT+AGG | - | chr2.3:1381973-1381992 | None:intergenic | 25.0% |
| !!! | GGACACTTTTATTTAGAAAA+TGG | + | chr2.3:1380905-1380924 | MS.gene86392:intron | 25.0% |
| !!! | GGTTTAGCTTGATTTTTAAT+AGG | + | chr2.3:1381701-1381720 | MS.gene86392:intron | 25.0% |
| !!! | TATCTGTTACTGATTTTTGA+TGG | - | chr2.3:1383429-1383448 | None:intergenic | 25.0% |
| !!! | TGAAATGAGTCAGTTATTTT+GGG | + | chr2.3:1380884-1380903 | MS.gene86392:intron | 25.0% |
| !!! | TGTCCCTATTTATTTCTAAT+AGG | - | chr2.3:1383928-1383947 | None:intergenic | 25.0% |
| !!! | TTTTATTTGATGACGGTAAA+TGG | + | chr2.3:1383724-1383743 | MS.gene86392:intron | 25.0% |
| AAACATTCAAACACAAACCA+AGG | + | chr2.3:1382424-1382443 | MS.gene86392:intron | 30.0% | |
| AACTTTATCTGATTCTGAAC+TGG | + | chr2.3:1383135-1383154 | MS.gene86392:intron | 30.0% | |
| AATATAATCAACACATCAGG+AGG | - | chr2.3:1384226-1384245 | None:intergenic | 30.0% | |
| AATTCATTGCTAAACGAGAA+TGG | - | chr2.3:1384477-1384496 | None:intergenic | 30.0% | |
| AATTCTATTTGCAAGGTTAG+TGG | + | chr2.3:1383184-1383203 | MS.gene86392:intron | 30.0% | |
| ACTTTCATTCTTCTTAGGAA+TGG | + | chr2.3:1380000-1380019 | MS.gene86392:CDS | 30.0% | |
| AGAAAATGGGTCAGTTATTT+CGG | + | chr2.3:1380919-1380938 | MS.gene86392:intron | 30.0% | |
| AGACTAATATGATAATAGCC+TGG | + | chr2.3:1381974-1381993 | MS.gene86392:intron | 30.0% | |
| AGAGAAGCTTGCAAAAATTA+AGG | - | chr2.3:1384433-1384452 | None:intergenic | 30.0% | |
| AGATGCAAAAAGATACAGAT+TGG | - | chr2.3:1385377-1385396 | None:intergenic | 30.0% | |
| ATAAGTTGTTTATCCGAACA+TGG | + | chr2.3:1381909-1381928 | MS.gene86392:intron | 30.0% | |
| ATCCCTTCAAAAGAAATACA+GGG | - | chr2.3:1385464-1385483 | None:intergenic | 30.0% | |
| ATGAAACACTAGAAATGAAC+GGG | - | chr2.3:1382499-1382518 | None:intergenic | 30.0% | |
| ATGTATCAGCAGAAATACAT+TGG | + | chr2.3:1380052-1380071 | MS.gene86392:CDS | 30.0% | |
| ATTAAGGCAATAGATCGAAA+AGG | - | chr2.3:1384417-1384436 | None:intergenic | 30.0% | |
| ATTCAGCAGTTATGATTAAG+GGG | + | chr2.3:1380380-1380399 | MS.gene86392:intron | 30.0% | |
| ATTCTATTTGCAAGGTTAGT+GGG | + | chr2.3:1383185-1383204 | MS.gene86392:intron | 30.0% | |
| CATGAAACACTAGAAATGAA+CGG | - | chr2.3:1382500-1382519 | None:intergenic | 30.0% | |
| CTCACTAAATAGCATATGTT+TGG | - | chr2.3:1380235-1380254 | None:intergenic | 30.0% | |
| GAATTCTTGAGGAAGAAATT+AGG | + | chr2.3:1380347-1380366 | MS.gene86392:intron | 30.0% | |
| GAATTTGTGAAATTGAAAGC+TGG | + | chr2.3:1380022-1380041 | MS.gene86392:CDS | 30.0% | |
| GACTAATATGATAATAGCCT+GGG | + | chr2.3:1381975-1381994 | MS.gene86392:intron | 30.0% | |
| GCATTCTATCTTTGTAATTG+GGG | - | chr2.3:1383953-1383972 | None:intergenic | 30.0% | |
| TATATAGATCAGAGAGAGAT+CGG | - | chr2.3:1381574-1381593 | None:intergenic | 30.0% | |
| TATCCCTTCAAAAGAAATAC+AGG | - | chr2.3:1385465-1385484 | None:intergenic | 30.0% | |
| TATCTGAGAGAACTTAGATT+CGG | - | chr2.3:1382332-1382351 | None:intergenic | 30.0% | |
| TCGTTCATATTGTGATTTGA+TGG | + | chr2.3:1384704-1384723 | MS.gene86392:intron | 30.0% | |
| TGATTGTTCTAACAAGTTCA+AGG | + | chr2.3:1381022-1381041 | MS.gene86392:intron | 30.0% | |
| TGGAACTCTATTCTTATTCT+TGG | - | chr2.3:1382279-1382298 | None:intergenic | 30.0% | |
| TGTGTTTGGATGAAATTGTA+TGG | + | chr2.3:1384976-1384995 | MS.gene86392:CDS | 30.0% | |
| TTATACATAAGCGCTTATCA+TGG | + | chr2.3:1381874-1381893 | MS.gene86392:intron | 30.0% | |
| TTCCATACTTATCAAGGAAA+CGG | - | chr2.3:1384947-1384966 | None:intergenic | 30.0% | |
| TTCTCTTTAATCAGATTGAG+GGG | + | chr2.3:1382468-1382487 | MS.gene86392:intron | 30.0% | |
| TTGTGTCAATTAAATTGGGA+CGG | - | chr2.3:1380732-1380751 | None:intergenic | 30.0% | |
| TTTGGATGAAATTGTATGGA+AGG | + | chr2.3:1384980-1384999 | MS.gene86392:CDS | 30.0% | |
| ! | AACATATAGGTTTTTCCAAC+TGG | - | chr2.3:1384786-1384805 | None:intergenic | 30.0% |
| ! | CCAAGTTTTGCATGAAAATA+TGG | - | chr2.3:1385314-1385333 | None:intergenic | 30.0% |
| ! | CCATATTTTCATGCAAAACT+TGG | + | chr2.3:1385311-1385330 | MS.gene86392:intron | 30.0% |
| ! | TATTCATTGCATTAGCTTGA+TGG | - | chr2.3:1381230-1381249 | None:intergenic | 30.0% |
| ! | TGTTAGAAAGTAAATGGACT+TGG | + | chr2.3:1382799-1382818 | MS.gene86392:intron | 30.0% |
| ! | TGTTATGATTGCAGTTTTCA+TGG | + | chr2.3:1382911-1382930 | MS.gene86392:intron | 30.0% |
| ! | TTCCCTGTATTTCTTTTGAA+GGG | + | chr2.3:1385459-1385478 | MS.gene86392:intron | 30.0% |
| ! | TTTCCCTGTATTTCTTTTGA+AGG | + | chr2.3:1385458-1385477 | MS.gene86392:intron | 30.0% |
| !! | AATGACAATAATGGATCTAG+TGG | - | chr2.3:1381179-1381198 | None:intergenic | 30.0% |
| !! | ATTTCTTTTGAAGGGATATC+TGG | + | chr2.3:1385467-1385486 | MS.gene86392:intron | 30.0% |
| !! | CATATTGTTATTTCACCAGT+TGG | + | chr2.3:1384768-1384787 | MS.gene86392:intron | 30.0% |
| !! | GCTAGTTTATCATCTTTTCT+AGG | - | chr2.3:1384504-1384523 | None:intergenic | 30.0% |
| !! | TAAAGGGTATCTCAGTAATT+TGG | + | chr2.3:1381422-1381441 | MS.gene86392:CDS | 30.0% |
| !! | TTTTGATTATCAGAACTGAG+TGG | + | chr2.3:1382885-1382904 | MS.gene86392:intron | 30.0% |
| !!! | CGACCACTTTTGTTATTTAT+AGG | + | chr2.3:1384051-1384070 | MS.gene86392:intron | 30.0% |
| AAAACGGAATATGATCCTTG+CGG | + | chr2.3:1381497-1381516 | MS.gene86392:CDS | 35.0% | |
| AAATAACAAAAGTGGTCGAG+AGG | - | chr2.3:1384049-1384068 | None:intergenic | 35.0% | |
| AAATCATGCTAATGCAGAAG+AGG | - | chr2.3:1381048-1381067 | None:intergenic | 35.0% | |
| AACAATATGCTTGAGTCACT+CGG | - | chr2.3:1384757-1384776 | None:intergenic | 35.0% | |
| AAGTGAATTCCACAATGTTC+AGG | + | chr2.3:1380170-1380189 | MS.gene86392:CDS | 35.0% | |
| AATAACAAAAGTGGTCGAGA+GGG | - | chr2.3:1384048-1384067 | None:intergenic | 35.0% | |
| ACAATGTTCAGGCAAATTGT+GGG | + | chr2.3:1380181-1380200 | MS.gene86392:CDS | 35.0% | |
| ACATAACTGCAAATTGCTGA+TGG | + | chr2.3:1380293-1380312 | MS.gene86392:intron | 35.0% | |
| ACTAGGAGCTGATAATCTTA+AGG | + | chr2.3:1382979-1382998 | MS.gene86392:CDS | 35.0% | |
| AGAAAAGATAGAAGCTACCT+AGG | - | chr2.3:1382698-1382717 | None:intergenic | 35.0% | |
| AGATGTCAGTATATACGTTG+TGG | + | chr2.3:1383650-1383669 | MS.gene86392:CDS | 35.0% | |
| AGTCCTTTCATCAACAATGT+AGG | + | chr2.3:1384130-1384149 | MS.gene86392:intron | 35.0% | |
| AGTGATCTCGAGAATAAGTA+TGG | + | chr2.3:1382359-1382378 | MS.gene86392:intron | 35.0% | |
| ATCAGAAACAAACTCAAAGC+TGG | + | chr2.3:1380126-1380145 | MS.gene86392:CDS | 35.0% | |
| ATCAGCAATTTGCAGTTATG+TGG | - | chr2.3:1380294-1380313 | None:intergenic | 35.0% | |
| ATGTCAGTATATACGTTGTG+GGG | + | chr2.3:1383652-1383671 | MS.gene86392:CDS | 35.0% | |
| CAGTAACAGATACAAGATTG+TGG | + | chr2.3:1383437-1383456 | MS.gene86392:intron | 35.0% | |
| CTAGGAGCTGATAATCTTAA+GGG | + | chr2.3:1382980-1382999 | MS.gene86392:CDS | 35.0% | |
| GAAAAGATAGAAGCTACCTA+GGG | - | chr2.3:1382697-1382716 | None:intergenic | 35.0% | |
| GAAGGGATATCTGGAAAATA+CGG | + | chr2.3:1385476-1385495 | MS.gene86392:intron | 35.0% | |
| GAATCTAAGTTCTCTCAGAT+AGG | + | chr2.3:1382331-1382350 | MS.gene86392:intron | 35.0% | |
| GATAGAATGCTACAGAACTT+CGG | + | chr2.3:1383963-1383982 | MS.gene86392:intron | 35.0% | |
| GATGTCAGTATATACGTTGT+GGG | + | chr2.3:1383651-1383670 | MS.gene86392:CDS | 35.0% | |
| GCTATTAAAGGATACTCTTG+CGG | + | chr2.3:1384522-1384541 | MS.gene86392:intron | 35.0% | |
| GGTGAACTTTCATTCTTCTT+AGG | + | chr2.3:1379995-1380014 | MS.gene86392:CDS | 35.0% | |
| TACAATAACCTCAGCTGTAA+AGG | + | chr2.3:1384893-1384912 | MS.gene86392:CDS | 35.0% | |
| TCAGCAATTTGCAGTTATGT+GGG | - | chr2.3:1380293-1380312 | None:intergenic | 35.0% | |
| TTCAGCAGTTATGATTAAGG+GGG | + | chr2.3:1380381-1380400 | MS.gene86392:intron | 35.0% | |
| TTGAAAACTCGGCAACATTA+TGG | + | chr2.3:1382582-1382601 | MS.gene86392:intron | 35.0% | |
| TTGACAGCTTACGAACATAT+AGG | - | chr2.3:1384799-1384818 | None:intergenic | 35.0% | |
| TTGGAAAAGAGTTGTGGAAA+TGG | + | chr2.3:1383375-1383394 | MS.gene86392:intron | 35.0% | |
| ! | ACAGGTGATTTTTACAACTC+CGG | + | chr2.3:1381446-1381465 | MS.gene86392:CDS | 35.0% |
| ! | ATTGTTGATGAAAGGACTGT+TGG | - | chr2.3:1384128-1384147 | None:intergenic | 35.0% |
| ! | CTTACAAAGAAGTGCAAATG+AGG | - | chr2.3:1382242-1382261 | None:intergenic | 35.0% |
| ! | GAAAATGGGTCAGTTATTTC+GGG | + | chr2.3:1380920-1380939 | MS.gene86392:intron | 35.0% |
| ! | GAACCTACATTGTTGATGAA+AGG | - | chr2.3:1384136-1384155 | None:intergenic | 35.0% |
| ! | GAATGCATTTTCAGAAACAC+TGG | - | chr2.3:1382673-1382692 | None:intergenic | 35.0% |
| ! | GTATCTCAGTAATTTGGAAC+AGG | + | chr2.3:1381428-1381447 | MS.gene86392:CDS | 35.0% |
| ! | TACCTAGGCTTTATCTGATA+GGG | - | chr2.3:1382085-1382104 | None:intergenic | 35.0% |
| ! | TGGAAGAATTTGCTTGTGTT+TGG | + | chr2.3:1384962-1384981 | MS.gene86392:CDS | 35.0% |
| ! | TTAAAGTGCTCACCTAGATA+AGG | - | chr2.3:1383117-1383136 | None:intergenic | 35.0% |
| ! | TTACCTAGGCTTTATCTGAT+AGG | - | chr2.3:1382086-1382105 | None:intergenic | 35.0% |
| ! | TTTCAGCGTTTTCTTTGATC+TGG | + | chr2.3:1381652-1381671 | MS.gene86392:intron | 35.0% |
| !! | ACTTGGAACTTTTTCTTGTG+TGG | + | chr2.3:1382816-1382835 | MS.gene86392:intron | 35.0% |
| !! | AGCTTTGAGTTTGTTTCTGA+TGG | - | chr2.3:1380127-1380146 | None:intergenic | 35.0% |
| !! | CTTGATGGATTACCTACATA+TGG | - | chr2.3:1381215-1381234 | None:intergenic | 35.0% |
| !! | TTGGTTAGCTTGTTAACCAA+GGG | + | chr2.3:1380564-1380583 | MS.gene86392:intron | 35.0% |
| !!! | ATCTGGTTTTCTAATTTCCC+AGG | - | chr2.3:1381995-1382014 | None:intergenic | 35.0% |
| !!! | GTTTTGTTTTTCTCCAGTGT+CGG | + | chr2.3:1384860-1384879 | MS.gene86392:intron | 35.0% |
| AAACTCCTCTTTCGCAACAA+TGG | - | chr2.3:1385416-1385435 | None:intergenic | 40.0% | |
| AAGAATCAGAACTGCAGACA+AGG | - | chr2.3:1384175-1384194 | None:intergenic | 40.0% | |
| AAGAGAGAATTGGGGACTTT+GGG | - | chr2.3:1384007-1384026 | None:intergenic | 40.0% | |
| AAGTTTAGTGCGCTTTACCT+AGG | - | chr2.3:1382100-1382119 | None:intergenic | 40.0% | |
| ACATACATCCTTTACAGCTG+AGG | - | chr2.3:1384904-1384923 | None:intergenic | 40.0% | |
| AGCTATCAGGTGAACTAGTA+GGG | + | chr2.3:1384592-1384611 | MS.gene86392:intron | 40.0% | |
| AGTGAGAAAAGCTAGCTATC+AGG | + | chr2.3:1384579-1384598 | MS.gene86392:intron | 40.0% | |
| AGTTCGCAACTTAGCTTAAG+TGG | - | chr2.3:1382299-1382318 | None:intergenic | 40.0% | |
| ATGGGAAATATTGTGCAGGA+TGG | - | chr2.3:1384354-1384373 | None:intergenic | 40.0% | |
| CACAATGTTCAGGCAAATTG+TGG | + | chr2.3:1380180-1380199 | MS.gene86392:CDS | 40.0% | |
| CACAATTTGCCTGAACATTG+TGG | - | chr2.3:1380182-1380201 | None:intergenic | 40.0% | |
| CACTAACAAACTAACTCCCT+TGG | - | chr2.3:1380583-1380602 | None:intergenic | 40.0% | |
| CAGCAATTTGCAGTTATGTG+GGG | - | chr2.3:1380292-1380311 | None:intergenic | 40.0% | |
| CAGCTGTAAAGGATGTATGT+GGG | + | chr2.3:1384904-1384923 | MS.gene86392:CDS | 40.0% | |
| CCAAGTATCTTCTACAATGC+AGG | - | chr2.3:1382857-1382876 | None:intergenic | 40.0% | |
| CCTGCATTGTAGAAGATACT+TGG | + | chr2.3:1382854-1382873 | MS.gene86392:intron | 40.0% | |
| CGTTCTTTCTTGGTCAAACT+AGG | + | chr2.3:1382962-1382981 | MS.gene86392:CDS | 40.0% | |
| CTTGGTTAACAAGCTAACCA+AGG | - | chr2.3:1380565-1380584 | None:intergenic | 40.0% | |
| GAGAGCAGTATACTTACTTG+TGG | - | chr2.3:1383036-1383055 | None:intergenic | 40.0% | |
| GGTAACAAGGTTAGGTAGTT+GGG | - | chr2.3:1384107-1384126 | None:intergenic | 40.0% | |
| TAAGAGAGAATTGGGGACTT+TGG | - | chr2.3:1384008-1384027 | None:intergenic | 40.0% | |
| TAGCTATCAGGTGAACTAGT+AGG | + | chr2.3:1384591-1384610 | MS.gene86392:intron | 40.0% | |
| TAGGTAAAGCGCACTAAACT+TGG | + | chr2.3:1382099-1382118 | MS.gene86392:intron | 40.0% | |
| TCAGCTGTAAAGGATGTATG+TGG | + | chr2.3:1384903-1384922 | MS.gene86392:CDS | 40.0% | |
| TCATTGCTAAACGAGAATGG+TGG | - | chr2.3:1384474-1384493 | None:intergenic | 40.0% | |
| TCCTCAATCAAAGCCATGTT+CGG | - | chr2.3:1381925-1381944 | None:intergenic | 40.0% | |
| TCTGAAAATGCATTCTCCCT+AGG | + | chr2.3:1382678-1382697 | MS.gene86392:intron | 40.0% | |
| TGGTAACAAGGTTAGGTAGT+TGG | - | chr2.3:1384108-1384127 | None:intergenic | 40.0% | |
| TGGTATGGGAAATATTGTGC+AGG | - | chr2.3:1384358-1384377 | None:intergenic | 40.0% | |
| TGTCAATTAAATTGGGACGG+AGG | - | chr2.3:1380729-1380748 | None:intergenic | 40.0% | |
| TTACTTTGTATGTGAGTGGC+TGG | - | chr2.3:1382767-1382786 | None:intergenic | 40.0% | |
| TTCTCCTCATGCTGTCAATT+GGG | + | chr2.3:1384312-1384331 | MS.gene86392:intron | 40.0% | |
| TTCTGATGTCTTCAGAAGCT+GGG | + | chr2.3:1380527-1380546 | MS.gene86392:intron | 40.0% | |
| ! | ACCTAGGCTTTATCTGATAG+GGG | - | chr2.3:1382084-1382103 | None:intergenic | 40.0% |
| ! | CTCTTGCGGTGTTGAAAATA+TGG | + | chr2.3:1384536-1384555 | MS.gene86392:intron | 40.0% |
| ! | GCTTGTTAGTCAAGCTTTGA+AGG | + | chr2.3:1382160-1382179 | MS.gene86392:intron | 40.0% |
| ! | TGAGGTATCTGTGTAATAGC+AGG | + | chr2.3:1380209-1380228 | MS.gene86392:CDS | 40.0% |
| ! | TGTTTGTTGCGTCCATATGT+AGG | + | chr2.3:1381200-1381219 | MS.gene86392:intron | 40.0% |
| ! | TTGTCTGCAGTTCTGATTCT+TGG | + | chr2.3:1384174-1384193 | MS.gene86392:intron | 40.0% |
| !! | AAACGAGAATGGTGGATTGA+GGG | - | chr2.3:1384466-1384485 | None:intergenic | 40.0% |
| !! | CAAGGGAGTTAGTTTGTTAG+TGG | + | chr2.3:1380581-1380600 | MS.gene86392:intron | 40.0% |
| !! | CTTGGTTAGCTTGTTAACCA+AGG | + | chr2.3:1380563-1380582 | MS.gene86392:intron | 40.0% |
| !! | TAAACGAGAATGGTGGATTG+AGG | - | chr2.3:1384467-1384486 | None:intergenic | 40.0% |
| !! | TGAAAGGACTGTTGGTAACA+AGG | - | chr2.3:1384120-1384139 | None:intergenic | 40.0% |
| !!! | GGACGCTAGTTTTATGGTAT+GGG | - | chr2.3:1384372-1384391 | None:intergenic | 40.0% |
| !!! | TGGACGCTAGTTTTATGGTA+TGG | - | chr2.3:1384373-1384392 | None:intergenic | 40.0% |
| AACAGAGCAACAGTTGTGGA+TGG | - | chr2.3:1384393-1384412 | None:intergenic | 45.0% | |
| ACGTACACATGACTTGAGAG+AGG | - | chr2.3:1383060-1383079 | None:intergenic | 45.0% | |
| AGGAAACAGAGCAACAGTTG+TGG | - | chr2.3:1384397-1384416 | None:intergenic | 45.0% | |
| AGGAGTCTATATCAGCTGAC+CGG | - | chr2.3:1382222-1382241 | None:intergenic | 45.0% | |
| AGGGCAATATCCTCATCGAA+CGG | + | chr2.3:1381538-1381557 | MS.gene86392:CDS | 45.0% | |
| CAGTATATACGTTGTGGGGA+AGG | + | chr2.3:1383656-1383675 | MS.gene86392:CDS | 45.0% | |
| CGCCGTTTCCTTGATAAGTA+TGG | + | chr2.3:1384942-1384961 | MS.gene86392:CDS | 45.0% | |
| CTGGGTCTAGTAACAAACCT+TGG | + | chr2.3:1380545-1380564 | MS.gene86392:intron | 45.0% | |
| CTGTTCCATTGTTGCGAAAG+AGG | + | chr2.3:1385408-1385427 | MS.gene86392:intron | 45.0% | |
| CTTACTTGTGGCAAGCAACT+AGG | - | chr2.3:1383024-1383043 | None:intergenic | 45.0% | |
| CTTCTCCTCATGCTGTCAAT+TGG | + | chr2.3:1384311-1384330 | MS.gene86392:intron | 45.0% | |
| CTTCTGATGTCTTCAGAAGC+TGG | + | chr2.3:1380526-1380545 | MS.gene86392:intron | 45.0% | |
| CTTTCGCAACAATGGAACAG+AGG | - | chr2.3:1385408-1385427 | None:intergenic | 45.0% | |
| GCAATGTAAGCTGCAAGCTT+AGG | + | chr2.3:1382190-1382209 | MS.gene86392:intron | 45.0% | |
| GCAGGATGGACAAGATTCTA+GGG | - | chr2.3:1384340-1384359 | None:intergenic | 45.0% | |
| GCTATCAGGTGAACTAGTAG+GGG | + | chr2.3:1384593-1384612 | MS.gene86392:intron | 45.0% | |
| GCTGGATGAATGCATTGAAG+AGG | + | chr2.3:1380144-1380163 | MS.gene86392:CDS | 45.0% | |
| GGCTGGAATGACATGTGATA+TGG | - | chr2.3:1382750-1382769 | None:intergenic | 45.0% | |
| GTAAAGATAACCTCCGACAC+TGG | - | chr2.3:1384876-1384895 | None:intergenic | 45.0% | |
| TCAAACTCAACCTTGCTCAC+CGG | - | chr2.3:1381468-1381487 | None:intergenic | 45.0% | |
| TCTGATTCTGAACTGGTCCA+AGG | + | chr2.3:1383142-1383161 | MS.gene86392:intron | 45.0% | |
| TGCAGGATGGACAAGATTCT+AGG | - | chr2.3:1384341-1384360 | None:intergenic | 45.0% | |
| TTCAGAAGCTCGCTGATGTT+CGG | - | chr2.3:1380500-1380519 | None:intergenic | 45.0% | |
| TTCGATGAGGATATTGCCCT+CGG | - | chr2.3:1381538-1381557 | None:intergenic | 45.0% | |
| ! | ATGGGTCAGTTATTTCGGGA+CGG | + | chr2.3:1380924-1380943 | MS.gene86392:intron | 45.0% |
| ! | TTTTACAACTCCGGTGAGCA+AGG | + | chr2.3:1381455-1381474 | MS.gene86392:CDS | 45.0% |
| ! | TTTTCATGGAGTTCCTGCAG+AGG | + | chr2.3:1382925-1382944 | MS.gene86392:CDS | 45.0% |
| !! | AACGAGAATGGTGGATTGAG+GGG | - | chr2.3:1384465-1384484 | None:intergenic | 45.0% |
| !! | GGACTGTTGGTAACAAGGTT+AGG | - | chr2.3:1384115-1384134 | None:intergenic | 45.0% |
| !! | TCCGAACATGGCTTTGATTG+AGG | + | chr2.3:1381921-1381940 | MS.gene86392:intron | 45.0% |
| !! | TTGTTTTTCTCCAGTGTCGG+AGG | + | chr2.3:1384863-1384882 | MS.gene86392:intron | 45.0% |
| !!! | GTGGATGGACGCTAGTTTTA+TGG | - | chr2.3:1384378-1384397 | None:intergenic | 45.0% |
| !!! | TAATTTTATTCTTTAAATTT+TGG | - | chr2.3:1381072-1381091 | None:intergenic | 5.0% |
| AGTGTACTCACCGTTCGATG+AGG | - | chr2.3:1381551-1381570 | None:intergenic | 50.0% | |
| ATGAGGAGAAGCAAAGCCAC+AGG | - | chr2.3:1384302-1384321 | None:intergenic | 50.0% | |
| ATTGTTGTGCCTAGCACCTG+TGG | + | chr2.3:1384283-1384302 | MS.gene86392:intron | 50.0% | |
| CCAAGAAAGAACGCCAGTGT+AGG | - | chr2.3:1382955-1382974 | None:intergenic | 50.0% | |
| CCTACACTGGCGTTCTTTCT+TGG | + | chr2.3:1382952-1382971 | MS.gene86392:CDS | 50.0% | |
| CTGCAAGCTTAGGCTTTCTC+CGG | + | chr2.3:1382200-1382219 | MS.gene86392:intron | 50.0% | |
| GCCCCTATCAGATAAAGCCT+AGG | + | chr2.3:1382080-1382099 | MS.gene86392:intron | 50.0% | |
| GGAACCCAATTGACAGCATG+AGG | - | chr2.3:1384319-1384338 | None:intergenic | 50.0% | |
| GGCAAATTGTGGGATCTCTG+AGG | + | chr2.3:1380191-1380210 | MS.gene86392:CDS | 50.0% | |
| TCTGATAGGGGCTACCATTG+CGG | - | chr2.3:1382072-1382091 | None:intergenic | 50.0% | |
| TGCTTGAGTCACTCGGCAAT+TGG | - | chr2.3:1384750-1384769 | None:intergenic | 50.0% | |
| TGGAAGGTGAGAAGACATGC+CGG | + | chr2.3:1384996-1385015 | MS.gene86392:intron | 50.0% | |
| TGGAGATTCGTGCATCCTCT+CGG | + | chr2.3:1382119-1382138 | MS.gene86392:intron | 50.0% | |
| ! | GTCAGTTATTTCGGGACGGA+GGG | + | chr2.3:1380928-1380947 | MS.gene86392:intron | 50.0% |
| AAGGAAACGGCGCTCAGTTG+GGG | - | chr2.3:1384934-1384953 | None:intergenic | 55.0% | |
| AGAAGCTCGCTGATGTTCGG+AGG | - | chr2.3:1380497-1380516 | None:intergenic | 55.0% | |
| AGAGTTTGTCCCTCTCCGAG+AGG | - | chr2.3:1382137-1382156 | None:intergenic | 55.0% | |
| ATCTCACTCTCGACCCGCAA+TGG | + | chr2.3:1382055-1382074 | MS.gene86392:intron | 55.0% | |
| ATTCGTGCATCCTCTCGGAG+AGG | + | chr2.3:1382124-1382143 | MS.gene86392:intron | 55.0% | |
| CAAGGAAACGGCGCTCAGTT+GGG | - | chr2.3:1384935-1384954 | None:intergenic | 55.0% | |
| CTGATAGGGGCTACCATTGC+GGG | - | chr2.3:1382071-1382090 | None:intergenic | 55.0% | |
| GAAGCAAAGCCACAGGTGCT+AGG | - | chr2.3:1384295-1384314 | None:intergenic | 55.0% | |
| GCTTGCAGCTTACATTGCCG+CGG | - | chr2.3:1382188-1382207 | None:intergenic | 55.0% | |
| TCAAGGAAACGGCGCTCAGT+TGG | - | chr2.3:1384936-1384955 | None:intergenic | 55.0% | |
| TTCGTGCATCCTCTCGGAGA+GGG | + | chr2.3:1382125-1382144 | MS.gene86392:intron | 55.0% | |
| ! | GGTCAGTTATTTCGGGACGG+AGG | + | chr2.3:1380927-1380946 | MS.gene86392:intron | 55.0% |
| !! | CGTTGGCAAAAAGCACCGCA+AGG | - | chr2.3:1381515-1381534 | None:intergenic | 55.0% |
| !! | GTCAAGCTTTGAAGGTGCCG+CGG | + | chr2.3:1382168-1382187 | MS.gene86392:intron | 55.0% |
| !! | GTGCTTTTTGCCAACGCCGA+GGG | + | chr2.3:1381519-1381538 | MS.gene86392:CDS | 55.0% |
| AGGAAACGGCGCTCAGTTGG+GGG | - | chr2.3:1384933-1384952 | None:intergenic | 60.0% | |
| GAGGATATTGCCCTCGGCGT+TGG | - | chr2.3:1381532-1381551 | None:intergenic | 60.0% | |
| !! | GGTGCTTTTTGCCAACGCCG+AGG | + | chr2.3:1381518-1381537 | MS.gene86392:CDS | 60.0% |
| CAGTGTAGGCGCTCCTCTGC+AGG | - | chr2.3:1382941-1382960 | None:intergenic | 65.0% | |
| !! | CTGCAGAGGAGCGCCTACAC+TGG | + | chr2.3:1382939-1382958 | MS.gene86392:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 1379983 | 1385551 | 1379983 | ID=MS.gene86392 |
| chr2.3 | mRNA | 1379983 | 1385551 | 1379983 | ID=MS.gene86392.t1;Parent=MS.gene86392 |
| chr2.3 | exon | 1379983 | 1380249 | 1379983 | ID=MS.gene86392.t1.exon1;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1379983 | 1380249 | 1379983 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| chr2.3 | exon | 1381360 | 1381559 | 1381360 | ID=MS.gene86392.t1.exon2;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1381360 | 1381559 | 1381360 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| chr2.3 | exon | 1382925 | 1383038 | 1382925 | ID=MS.gene86392.t1.exon3;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1382925 | 1383038 | 1382925 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| chr2.3 | exon | 1383620 | 1383699 | 1383620 | ID=MS.gene86392.t1.exon4;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1383620 | 1383699 | 1383620 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| chr2.3 | exon | 1384877 | 1385001 | 1384877 | ID=MS.gene86392.t1.exon5;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1384877 | 1385001 | 1384877 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| chr2.3 | exon | 1385480 | 1385551 | 1385480 | ID=MS.gene86392.t1.exon6;Parent=MS.gene86392.t1 |
| chr2.3 | CDS | 1385480 | 1385551 | 1385480 | ID=cds.MS.gene86392.t1;Parent=MS.gene86392.t1 |
| Gene Sequence |
| Protein sequence |
