AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005350.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005350.01.T01 MTR_1g097690 83.566 286 4 1 138 380 327 612 2.85e-168 484
MsG0180005350.01.T01 MTR_1g097690 64.029 139 23 4 19 132 3 139 3.91e-29 119
MsG0180005350.01.T01 MTR_6g042240 64.483 290 57 2 133 376 297 586 1.82e-130 387
MsG0180005350.01.T01 MTR_6g042240 64.483 290 57 2 133 376 337 626 3.28e-130 387
MsG0180005350.01.T01 MTR_6g042240 64.483 290 57 2 133 376 350 639 7.51e-130 387
MsG0180005350.01.T01 MTR_1g097690 87.742 155 16 2 138 292 327 478 7.03e-88 274
MsG0180005350.01.T01 MTR_1g097690 64.029 139 23 4 19 132 3 139 2.09e-29 119
MsG0180005350.01.T01 MTR_5g014090 46.182 275 102 3 142 370 347 621 1.27e-79 256
MsG0180005350.01.T01 MTR_1g071680 42.705 281 112 3 146 377 272 552 2.63e-73 238
MsG0180005350.01.T01 MTR_5g006820 46.360 261 90 4 159 370 351 610 4.12e-73 239
MsG0180005350.01.T01 MTR_4g098850 41.667 288 110 3 135 364 551 838 5.21e-72 241
MsG0180005350.01.T01 MTR_4g098850 40.865 208 77 2 206 367 2 209 3.07e-48 175
MsG0180005350.01.T01 MTR_7g095260 42.491 273 108 3 155 378 229 501 8.67e-72 233
MsG0180005350.01.T01 MTR_7g095260 42.804 271 106 3 157 378 283 553 1.91e-71 233
MsG0180005350.01.T01 MTR_1g103330 43.985 266 99 4 160 376 313 577 3.26e-70 231
MsG0180005350.01.T01 MTR_8g043480 44.492 236 81 3 162 347 45 280 1.92e-64 208
MsG0180005350.01.T01 MTR_8g043480 44.492 236 81 3 162 347 175 410 5.37e-63 208
MsG0180005350.01.T01 MTR_7g100070 45.763 236 87 6 165 360 175 409 1.04e-62 208
MsG0180005350.01.T01 MTR_7g100070 45.763 236 87 6 165 360 174 408 1.06e-62 208
MsG0180005350.01.T01 MTR_8g043480 44.492 236 81 3 162 347 240 475 1.22e-62 209
MsG0180005350.01.T01 MTR_7g100070 45.763 236 87 6 165 360 215 449 6.78e-62 207
MsG0180005350.01.T01 MTR_8g091360 39.695 262 108 4 159 370 312 573 1.45e-56 194
MsG0180005350.01.T01 MTR_6g072010 40.870 230 89 2 165 347 155 384 7.61e-56 188
MsG0180005350.01.T01 MTR_6g072010 40.870 230 89 2 165 347 166 395 1.31e-55 187
MsG0180005350.01.T01 MTR_1g038810 42.241 232 85 2 165 347 176 407 2.10e-55 188
MsG0180005350.01.T01 MTR_1g038810 42.241 232 85 2 165 347 180 411 2.25e-55 188
MsG0180005350.01.T01 MTR_6g009260 38.430 242 96 6 159 347 160 401 1.03e-45 162
MsG0180005350.01.T01 MTR_5g014090 50.000 140 67 2 142 281 347 483 8.90e-40 148
MsG0180005350.01.T01 MTR_8g091360 45.113 133 67 3 159 288 312 441 1.04e-32 128
MsG0180005350.01.T01 MTR_6g092670 32.609 92 60 1 161 252 642 731 1.14e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005350.01.T01 AT1G71710 59.410 271 66 1 145 371 382 652 5.44e-110 336
MsG0180005350.01.T01 AT1G71710 59.410 271 66 1 145 371 391 661 7.17e-110 336
MsG0180005350.01.T01 AT1G34120 55.336 253 67 2 159 365 179 431 2.28e-96 294
MsG0180005350.01.T01 AT1G34120 55.336 253 67 2 159 365 330 582 2.58e-94 293
MsG0180005350.01.T01 AT1G34120 55.336 253 67 2 159 365 334 586 4.21e-94 293
MsG0180005350.01.T01 AT1G34120 55.556 252 67 2 159 365 334 585 1.17e-93 292
MsG0180005350.01.T01 AT4G18010 46.718 259 92 2 150 362 377 635 2.51e-75 246
MsG0180005350.01.T01 AT2G32010 47.308 260 87 4 160 370 324 582 2.13e-73 239
MsG0180005350.01.T01 AT2G32010 47.308 260 87 4 160 370 324 582 2.13e-73 239
MsG0180005350.01.T01 AT2G32010 47.308 260 87 4 160 370 324 582 2.13e-73 239
MsG0180005350.01.T01 AT2G32010 47.308 260 87 4 160 370 324 582 2.13e-73 239
MsG0180005350.01.T01 AT3G63240 44.528 265 98 3 155 370 271 535 6.45e-73 237
MsG0180005350.01.T01 AT3G63240 44.528 265 98 3 155 370 271 535 6.45e-73 237
MsG0180005350.01.T01 AT1G05470 45.385 260 92 4 160 370 347 605 3.96e-71 234
MsG0180005350.01.T01 AT1G05470 45.385 260 92 4 160 370 347 605 3.96e-71 234
MsG0180005350.01.T01 AT2G37440 39.319 323 132 5 90 349 24 345 1.39e-66 216
MsG0180005350.01.T01 AT2G37440 47.436 234 78 2 161 349 193 426 6.22e-66 217
MsG0180005350.01.T01 AT2G37440 47.436 234 78 2 161 349 193 426 6.22e-66 217
MsG0180005350.01.T01 AT5G65090 41.887 265 105 3 149 364 186 450 6.23e-62 206
MsG0180005350.01.T01 AT5G65090 41.887 265 105 3 149 364 249 513 2.53e-61 206
MsG0180005350.01.T01 AT5G65090 41.887 265 105 3 149 364 249 513 2.53e-61 206
MsG0180005350.01.T01 AT5G04980 41.016 256 101 4 150 355 145 400 3.80e-59 197
MsG0180005350.01.T01 AT5G04980 41.016 256 101 4 150 355 180 435 1.24e-58 197
MsG0180005350.01.T01 AT5G04980 41.016 256 101 4 150 355 180 435 1.24e-58 197
MsG0180005350.01.T01 AT5G04980 41.016 256 101 4 150 355 209 464 1.91e-58 197
MsG0180005350.01.T01 AT2G01900 43.038 237 93 3 165 361 155 389 2.08e-56 190
MsG0180005350.01.T01 AT2G01900 41.463 246 93 3 165 361 155 398 4.71e-55 187
MsG0180005350.01.T01 AT2G01900 41.463 246 93 3 165 361 163 406 5.49e-55 187
MsG0180005350.01.T01 AT4G18010 43.902 205 69 2 150 308 377 581 1.32e-52 184
MsG0180005350.01.T01 AT1G34120 64.394 132 42 3 159 288 330 458 4.40e-51 177
MsG0180005350.01.T01 AT2G31830 32.979 94 61 1 159 252 658 749 1.56e-13 72.8
MsG0180005350.01.T01 AT2G31830 32.979 94 61 1 159 252 658 749 1.78e-13 72.8
MsG0180005350.01.T01 AT2G31830 32.979 94 61 1 159 252 658 749 1.87e-13 72.8
MsG0180005350.01.T01 AT1G65580 33.333 93 60 1 160 252 617 707 4.26e-13 71.6
MsG0180005350.01.T01 AT1G65580 33.333 93 60 1 160 252 351 441 5.75e-13 70.9
MsG0180005350.01.T01 AT2G43900 31.313 99 66 1 159 257 655 751 1.14e-12 70.1
MsG0180005350.01.T01 AT2G43900 31.915 94 62 1 159 252 655 746 1.18e-12 70.1
MsG0180005350.01.T01 AT1G05630 29.787 94 64 1 159 252 649 740 9.19e-12 67.4
MsG0180005350.01.T01 AT1G05630 29.787 94 64 1 159 252 649 740 9.53e-12 67.0
MsG0180005350.01.T01 AT1G05630 29.787 94 64 1 159 252 649 740 9.77e-12 67.4

Find 100 sgRNAs with CRISPR-Local

Find 656 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTTGTTTATAGAATTTA+TGG 0.063950 1:+90660699 MsG0180005350.01.T01:intron
TGAATTAATCTCGTACTTAT+AGG 0.195385 1:-90664196 None:intergenic
TCATTGTCTGAATCAGTTTC+AGG 0.208520 1:-90660821 None:intergenic
AACTGTTGGTGTTGGTGTTA+TGG 0.238835 1:+90662930 MsG0180005350.01.T01:CDS
TTCACCTAATGACTTTGATA+TGG 0.245049 1:+90661663 MsG0180005350.01.T01:CDS
GCAAATGGCTTAACATTAAA+AGG 0.260784 1:+90660738 MsG0180005350.01.T01:CDS
AGTGCTCGCTGTAGCTTCTT+TGG 0.278921 1:-90664625 None:intergenic
ACTGTTGGTGTTGGTGTTAT+GGG 0.280728 1:+90662931 MsG0180005350.01.T01:CDS
TTTGATTTAATTTACAACTA+TGG 0.282676 1:-90665111 None:intergenic
AACAGATGCTATAGATTTAC+TGG 0.299403 1:+90662765 MsG0180005350.01.T01:CDS
GGTGTACGCCTCGCAACCTT+TGG 0.301674 1:-90664240 None:intergenic
GGGGAAGCCGGTCACGGATT+AGG 0.306749 1:+90661112 MsG0180005350.01.T01:CDS
CTCATGATCCAAGATACTTT+TGG 0.312592 1:-90663284 None:intergenic
ACCCGTGACTGCCACATATA+TGG 0.328230 1:+90664582 MsG0180005350.01.T01:CDS
GGGAAGCCGGTCACGGATTA+GGG 0.338322 1:+90661113 MsG0180005350.01.T01:CDS
TGGAATTTAGCAACATAATC+TGG 0.339847 1:+90664703 MsG0180005350.01.T01:exon
TCCTGCTGATCTCTATGTCC+TGG 0.343777 1:+90661706 MsG0180005350.01.T01:CDS
TTAAAACCTAGTTGATAGAT+TGG 0.348812 1:+90665022 MsG0180005350.01.T01:three_prime_UTR
TGGACTTCCCAAAAGTATCT+TGG 0.350599 1:+90663276 MsG0180005350.01.T01:CDS
AAGATATGTAGTGGATTAGT+AGG 0.370085 1:-90653408 None:intergenic
GTTGGTGTTATGGGCTATAT+TGG 0.372990 1:+90662940 MsG0180005350.01.T01:CDS
GAGTACCTGTTGTTGCTTGT+TGG 0.389738 1:-90660308 None:intergenic
GAGTACCTGTTGTTGCTTGT+TGG 0.389738 1:-90660448 None:intergenic
CACAGCCAACAAGCAACAAC+AGG 0.389941 1:+90660303 MsG0180005350.01.T01:CDS
CACAGCCAACAAGCAACAAC+AGG 0.389941 1:+90660443 MsG0180005350.01.T01:CDS
CAACAATGGTCATGCGCAAA+TGG 0.392807 1:+90660723 MsG0180005350.01.T01:CDS
ATGTGGCAGTCACGGGTCTA+TGG 0.397224 1:-90664576 None:intergenic
TCATGACAAGTTTCGGCACT+TGG 0.403840 1:+90664683 MsG0180005350.01.T01:CDS
GAAGAAGTCATGACAAGTTT+CGG 0.412405 1:+90664676 MsG0180005350.01.T01:CDS
TTGTAAATTAAATCAAATAT+AGG 0.414138 1:+90665117 MsG0180005350.01.T01:three_prime_UTR
CGTATTCTATCACATGGAAA+TGG 0.418767 1:+90664508 MsG0180005350.01.T01:CDS
CACATATATGGCAGAGGTTG+AGG 0.419355 1:+90664594 MsG0180005350.01.T01:CDS
TAATGACTTTGATATGGATT+GGG 0.423226 1:+90661669 MsG0180005350.01.T01:CDS
CTAATGACTTTGATATGGAT+TGG 0.426341 1:+90661668 MsG0180005350.01.T01:CDS
GTGTACGCCTCGCAACCTTT+GGG 0.433772 1:-90664239 None:intergenic
CTGACGAAGGAACATATATC+TGG 0.435370 1:+90653481 MsG0180005350.01.T01:five_prime_UTR
TCTTTGTTTATAGAATTTAT+GGG 0.438492 1:+90660700 MsG0180005350.01.T01:intron
ATATTATTTACTGAATTTGA+AGG 0.445218 1:+90664844 MsG0180005350.01.T01:three_prime_UTR
CAATCCATATCAAAGTCATT+AGG 0.451052 1:-90661667 None:intergenic
CCACCTTACGGCAGGTGAAA+AGG 0.453682 1:+90663177 MsG0180005350.01.T01:CDS
AATTGGAAGAATTGTAATTG+AGG 0.457576 1:-90665150 None:intergenic
TGCCATATATGTGGCAGTCA+CGG 0.462589 1:-90664584 None:intergenic
GATTAGTAGGTATACTGATC+AGG 0.468889 1:-90653395 None:intergenic
ATCTTGAAGCTTTGATGAAG+AGG 0.470630 1:+90662797 MsG0180005350.01.T01:CDS
AGCATTTCGTTTGATTTCAT+CGG 0.472148 1:-90663203 None:intergenic
CTTTATATGCACCCACCTTA+CGG 0.476641 1:+90663165 MsG0180005350.01.T01:CDS
GACTGTATGATTTGTACATA+TGG 0.478230 1:+90664982 MsG0180005350.01.T01:three_prime_UTR
CCCAGGACATAGAGATCAGC+AGG 0.481874 1:-90661707 None:intergenic
GCCATATATGTGGCAGTCAC+GGG 0.485409 1:-90664583 None:intergenic
ATCTCGTACTTATAGGTTGG+TGG 0.485679 1:-90664189 None:intergenic
TGTTGCAACCGTTGCTTGCA+AGG 0.487428 1:-90653457 None:intergenic
AACATGAAGGTTTCAACTGT+TGG 0.500406 1:+90662916 MsG0180005350.01.T01:CDS
CAGGAGAGAGGATGAAGCTC+CGG 0.509164 1:+90661137 MsG0180005350.01.T01:CDS
CCTGCTGATCTCTATGTCCT+GGG 0.511583 1:+90661707 MsG0180005350.01.T01:CDS
TTAGAGTATGTGTGGGGACA+TGG 0.512093 1:+90661623 MsG0180005350.01.T01:intron
TGAGATTACTGAGTTACAAA+AGG 0.512142 1:+90664533 MsG0180005350.01.T01:CDS
TCCTGTCCCTAATCCGTGAC+CGG 0.513210 1:-90661119 None:intergenic
AAGGTTTCAACTGTTGGTGT+TGG 0.514208 1:+90662922 MsG0180005350.01.T01:CDS
TTAATCTCGTACTTATAGGT+TGG 0.517794 1:-90664192 None:intergenic
TGTGTGGGGACATGGAATGT+TGG 0.522260 1:+90661631 MsG0180005350.01.T01:CDS
GCCGGTCACGGATTAGGGAC+AGG 0.536950 1:+90661118 MsG0180005350.01.T01:CDS
ATTAATTCAGACAAGTACAT+TGG 0.541947 1:+90664210 MsG0180005350.01.T01:CDS
TGTTCTGAATATGTTTCCGC+AGG 0.543544 1:-90662897 None:intergenic
CAGAGTGGGGAAGCCGGTCA+CGG 0.545381 1:+90661106 MsG0180005350.01.T01:intron
TCATCACGGTATGGGTTCGA+AGG 0.552651 1:+90662872 MsG0180005350.01.T01:CDS
TTTAGCAACATAATCTGGAC+AGG 0.552955 1:+90664708 MsG0180005350.01.T01:exon
TCTCGTACTTATAGGTTGGT+GGG 0.555840 1:-90664188 None:intergenic
GAAACATATTCAGAACATGA+AGG 0.559314 1:+90662903 MsG0180005350.01.T01:CDS
CTCAACCTCTGCCATATATG+TGG 0.563035 1:-90664593 None:intergenic
ATAGAATTTATGGGCAACAA+TGG 0.563404 1:+90660709 MsG0180005350.01.T01:intron
GTGGGGACATGGAATGTTGG+AGG 0.563567 1:+90661634 MsG0180005350.01.T01:CDS
ATATGCACCCACCTTACGGC+AGG 0.566040 1:+90663169 MsG0180005350.01.T01:CDS
GAAACTGATTCAGACAATGA+AGG 0.567354 1:+90660824 MsG0180005350.01.T01:CDS
ATGGCTTAACATTAAAAGGA+AGG 0.567804 1:+90660742 MsG0180005350.01.T01:CDS
TAGTCACCATCTGATTCAGC+CGG 0.571583 1:-90661156 None:intergenic
TGCGATCGTATTCTATCACA+TGG 0.579104 1:+90664502 MsG0180005350.01.T01:CDS
ATTGTGCAGAGTGGGGAAGC+CGG 0.586219 1:+90661100 MsG0180005350.01.T01:intron
GTGGTATTTGAATCATCACT+TGG 0.586257 1:-90665087 None:intergenic
GACTGCCACATATATGGCAG+AGG 0.590077 1:+90664588 MsG0180005350.01.T01:CDS
ACAAAGCCAATCTATCAACT+AGG 0.591192 1:-90665028 None:intergenic
TCAAGTGTCCTTGCAAGCAA+CGG 0.593561 1:+90653449 MsG0180005350.01.T01:five_prime_UTR
GAAGCTCCGGCTGAATCAGA+TGG 0.599862 1:+90661150 MsG0180005350.01.T01:CDS
CAAACTAAAGCATACCATGC+TGG 0.608342 1:-90664261 None:intergenic
ATAGTGAGCAAGCAGATGGT+TGG 0.609242 1:+90662844 MsG0180005350.01.T01:CDS
ACGGATTAGGGACAGGAGAG+AGG 0.618825 1:+90661125 MsG0180005350.01.T01:CDS
TATGGGCTATATTGGTAACA+AGG 0.624421 1:+90662948 MsG0180005350.01.T01:CDS
TCATCACTTGGAAATTCACA+TGG 0.626583 1:-90665075 None:intergenic
TTCAGACAAGTACATTGGAG+AGG 0.633311 1:+90664215 MsG0180005350.01.T01:CDS
GAGAGGACCCAAAGGTTGCG+AGG 0.634911 1:+90664232 MsG0180005350.01.T01:CDS
TTTAATTTACAACTATGGAG+TGG 0.639270 1:-90665106 None:intergenic
TATAACAAGAAGATATGTAG+TGG 0.643028 1:-90653417 None:intergenic
GGACATAGAGATCAGCAGGA+TGG 0.650251 1:-90661703 None:intergenic
TTGCGAGGCGTACACCAGCA+TGG 0.653553 1:+90664247 MsG0180005350.01.T01:CDS
TTTCTATTAGAGTATGTGTG+GGG 0.665257 1:+90661617 MsG0180005350.01.T01:intron
TATGGGTTCGAAGGAGCCTG+CGG 0.674551 1:+90662881 MsG0180005350.01.T01:CDS
GTACATTGGAGAGGACCCAA+AGG 0.674845 1:+90664224 MsG0180005350.01.T01:CDS
ACACTTTCTCTCAGTCTCAG+TGG 0.676726 1:-90653365 None:intergenic
GAAGATAGTGAGCAAGCAGA+TGG 0.678985 1:+90662840 MsG0180005350.01.T01:CDS
ATGTTCGTGAAATACATCAG+AGG 0.682749 1:+90663227 MsG0180005350.01.T01:CDS
ACGGTTGCAACAGCTGACGA+AGG 0.696375 1:+90653468 MsG0180005350.01.T01:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATATAATTTTTTAA+CGG + Chr1:90656402-90656421 MsG0180005350.01.T01:intron 0.0%
!! AAAAAAAAAAATATTGTGTT+CGG + Chr1:90656101-90656120 MsG0180005350.01.T01:intron 10.0%
!! AAAAAAAAAATTTAGACTAT+TGG + Chr1:90659259-90659278 MsG0180005350.01.T01:intron 10.0%
!! AACACTAATTTATTTATATT+TGG - Chr1:90655662-90655681 None:intergenic 10.0%
!! ATAATTTCTCTTAATTTATA+TGG - Chr1:90654087-90654106 None:intergenic 10.0%
!! ATTAATTAATTTAGTAACTT+TGG + Chr1:90659489-90659508 MsG0180005350.01.T01:intron 10.0%
!! TAAAAAAATTTAGATATGTT+TGG + Chr1:90658026-90658045 MsG0180005350.01.T01:intron 10.0%
!! TAATTCATATAAATTATGAA+CGG - Chr1:90654612-90654631 None:intergenic 10.0%
!! TTATTAAAAAAAAATCTTAC+TGG - Chr1:90657184-90657203 None:intergenic 10.0%
!! TTGTAAATTAAATCAAATAT+AGG + Chr1:90665117-90665136 MsG0180005350.01.T01:three_prime_UTR 10.0%
!!! ATAATCACTTTTTTTTTTTT+AGG + Chr1:90661814-90661833 MsG0180005350.01.T01:intron 10.0%
!!! ATATACATAAGTATTTTTTT+AGG + Chr1:90655546-90655565 MsG0180005350.01.T01:intron 10.0%
!!! ATGATATTATATTTGTTATA+TGG + Chr1:90654464-90654483 MsG0180005350.01.T01:intron 10.0%
!!! TATACATAAGTATTTTTTTA+GGG + Chr1:90655547-90655566 MsG0180005350.01.T01:intron 10.0%
!!! TATTAAAATGATTTTCAAAA+TGG - Chr1:90661783-90661802 None:intergenic 10.0%
!!! TTTTTTTTTTTGACAAAATA+TGG - Chr1:90654053-90654072 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + Chr1:90659052-90659071 MsG0180005350.01.T01:intron 100.0%
!! AAAATAATAATGATGTCATA+TGG - Chr1:90659374-90659393 None:intergenic 15.0%
!! AAAATCAAAAAAAGAGAATA+AGG + Chr1:90653804-90653823 MsG0180005350.01.T01:intron 15.0%
!! AAAGTCAAACTATAATATAA+AGG + Chr1:90656786-90656805 MsG0180005350.01.T01:intron 15.0%
!! AAATAATAATGATGTCATAT+GGG - Chr1:90659373-90659392 None:intergenic 15.0%
!! AAATCAAAAAAAGAGAATAA+GGG + Chr1:90653805-90653824 MsG0180005350.01.T01:intron 15.0%
!! AACACATTAAATTTACTAAA+TGG - Chr1:90655477-90655496 None:intergenic 15.0%
!! AAGTCAAACTATAATATAAA+GGG + Chr1:90656787-90656806 MsG0180005350.01.T01:intron 15.0%
!! AATTTAATGTGTTAAATTAG+TGG + Chr1:90655484-90655503 MsG0180005350.01.T01:intron 15.0%
!! ATATATTAAAGCCATTTAAT+TGG + Chr1:90659860-90659879 MsG0180005350.01.T01:intron 15.0%
!! ATATTATTTACTGAATTTGA+AGG + Chr1:90664844-90664863 MsG0180005350.01.T01:three_prime_UTR 15.0%
!! ATGTTAAGAATATAAAACAA+TGG - Chr1:90654023-90654042 None:intergenic 15.0%
!! ATTAATTAATTATAGAGAAG+AGG - Chr1:90653567-90653586 None:intergenic 15.0%
!! ATTAATTTAAATTCCATACA+AGG + Chr1:90660098-90660117 MsG0180005350.01.T01:intron 15.0%
!! ATTTCTTTATAAATTCTAGT+CGG + Chr1:90660563-90660582 MsG0180005350.01.T01:intron 15.0%
!! CAATTCATAAATATTAGTTA+AGG - Chr1:90658270-90658289 None:intergenic 15.0%
!! TAAATTAACATATTTGAATG+TGG - Chr1:90663329-90663348 None:intergenic 15.0%
!! TAATTCTCATGTTTAATAAA+CGG - Chr1:90656318-90656337 None:intergenic 15.0%
!! TATTATTAAACGATTTAAAC+CGG - Chr1:90662705-90662724 None:intergenic 15.0%
!! TATTGTAATTAATAAACATG+TGG + Chr1:90660869-90660888 MsG0180005350.01.T01:intron 15.0%
!! TTATGAGTATGATAAAAAAA+TGG - Chr1:90664347-90664366 None:intergenic 15.0%
!! TTCTAATTTAATCATATAGA+AGG - Chr1:90663464-90663483 None:intergenic 15.0%
!! TTGATCACTTATTTATATTA+GGG - Chr1:90657897-90657916 None:intergenic 15.0%
!! TTTATACAATAATTCATGAT+CGG + Chr1:90655107-90655126 MsG0180005350.01.T01:intron 15.0%
!! TTTGATCACTTATTTATATT+AGG - Chr1:90657898-90657917 None:intergenic 15.0%
!!! AAGGTTTTTTTTTTTCAATT+TGG - Chr1:90657050-90657069 None:intergenic 15.0%
!!! AGAGTTTTTTTTTGTAATTA+TGG - Chr1:90656564-90656583 None:intergenic 15.0%
!!! AGGTTTTTTTTTTTCAATTT+GGG - Chr1:90657049-90657068 None:intergenic 15.0%
!!! CTTTTTTTACAAATAGATTT+GGG - Chr1:90654224-90654243 None:intergenic 15.0%
!!! GTTTGTGAAATTTTAAAATT+TGG + Chr1:90655273-90655292 MsG0180005350.01.T01:intron 15.0%
!!! TAAGTTTAGATTTTCTATAA+TGG - Chr1:90660050-90660069 None:intergenic 15.0%
!!! TATTATATTTGTTATATGGT+TGG + Chr1:90654468-90654487 MsG0180005350.01.T01:intron 15.0%
!!! TATTATGATAATGTACAAAA+AGG + Chr1:90659138-90659157 MsG0180005350.01.T01:intron 15.0%
!!! TCTTTGTTTATAGAATTTAT+GGG + Chr1:90660700-90660719 MsG0180005350.01.T01:intron 15.0%
!!! TCTTTTTTTACAAATAGATT+TGG - Chr1:90654225-90654244 None:intergenic 15.0%
!!! TTAAGTTTAATTTGTCTATT+TGG - Chr1:90654114-90654133 None:intergenic 15.0%
!!! TTACCTTAATTTTAATCAAA+AGG - Chr1:90663380-90663399 None:intergenic 15.0%
!!! TTTGATTTAATTTACAACTA+TGG - Chr1:90665114-90665133 None:intergenic 15.0%
!!! TTTTTTGATTTTCTTTTTGA+AGG - Chr1:90653796-90653815 None:intergenic 15.0%
!! AAAAAAAAAGGATTAACGAT+TGG + Chr1:90657819-90657838 MsG0180005350.01.T01:intron 20.0%
!! AAAAAATTTGCGTTAAAAAG+TGG - Chr1:90658237-90658256 None:intergenic 20.0%
!! AATAATAATGATGTCATATG+GGG - Chr1:90659372-90659391 None:intergenic 20.0%
!! AATATTCACATCTTTAATGT+CGG - Chr1:90655729-90655748 None:intergenic 20.0%
!! AATCAGAAAGTGAATAAAAA+TGG - Chr1:90663255-90663274 None:intergenic 20.0%
!! AATCCCATATATAATTATGA+AGG + Chr1:90654279-90654298 MsG0180005350.01.T01:intron 20.0%
!! AATTAACGCAATAAGAATAA+GGG + Chr1:90654627-90654646 MsG0180005350.01.T01:intron 20.0%
!! AATTATAACAACATTCACAA+TGG + Chr1:90656333-90656352 MsG0180005350.01.T01:intron 20.0%
!! ACCATCTTAAACATAAATAA+AGG - Chr1:90653684-90653703 None:intergenic 20.0%
!! ACTCCTTCATAATTATATAT+GGG - Chr1:90654285-90654304 None:intergenic 20.0%
!! AGATCTTAACCATAAATAAA+GGG - Chr1:90653756-90653775 None:intergenic 20.0%
!! ATAAATAAGTGATCAAATTG+AGG + Chr1:90657901-90657920 MsG0180005350.01.T01:intron 20.0%
!! ATACTGAAAGACTTAATTAA+TGG + Chr1:90654747-90654766 MsG0180005350.01.T01:intron 20.0%
!! ATCAGAAAGTGAATAAAAAT+GGG - Chr1:90663254-90663273 None:intergenic 20.0%
!! ATGAAACATGTATATCATTA+TGG - Chr1:90655221-90655240 None:intergenic 20.0%
!! ATGATAAAATATAAGTCAAG+TGG - Chr1:90658367-90658386 None:intergenic 20.0%
!! CAGTTCATCTAAATTAATAT+TGG - Chr1:90655997-90656016 None:intergenic 20.0%
!! CCATCTTAAACATAAATAAA+GGG - Chr1:90653683-90653702 None:intergenic 20.0%
!! GATTAATTTACTTCAATAGA+AGG - Chr1:90663487-90663506 None:intergenic 20.0%
!! GTGAAAAAAATAGAGAATTT+AGG - Chr1:90655602-90655621 None:intergenic 20.0%
!! TACTCCTTCATAATTATATA+TGG - Chr1:90654286-90654305 None:intergenic 20.0%
!! TAGATCTTAACCATAAATAA+AGG - Chr1:90653757-90653776 None:intergenic 20.0%
!! TCATGAAATCAAAATGAATA+AGG - Chr1:90664057-90664076 None:intergenic 20.0%
!! TCTAGATTGGATAATTAATA+AGG - Chr1:90654139-90654158 None:intergenic 20.0%
!! TCTTCAATGAGAAAAATATT+AGG - Chr1:90659028-90659047 None:intergenic 20.0%
!! TGATAAAATATAAGTCAAGT+GGG - Chr1:90658366-90658385 None:intergenic 20.0%
!! TTAACTGATTAAACTTTACA+GGG - Chr1:90656890-90656909 None:intergenic 20.0%
!! TTAAGATCTAAATAGAGTAA+GGG + Chr1:90653767-90653786 MsG0180005350.01.T01:intron 20.0%
!! TTTAACTGATTAAACTTTAC+AGG - Chr1:90656891-90656910 None:intergenic 20.0%
!! TTTATAGACAAATACGTAAT+TGG - Chr1:90658975-90658994 None:intergenic 20.0%
!! TTTATTTGCAGAAGAATAAT+TGG + Chr1:90663593-90663612 MsG0180005350.01.T01:intron 20.0%
!! TTTGTTTATAGTTTCCTTTA+GGG + Chr1:90654972-90654991 MsG0180005350.01.T01:intron 20.0%
!!! AAAAGTGTTTTATATACACT+TGG + Chr1:90662000-90662019 MsG0180005350.01.T01:intron 20.0%
!!! AATTAGCTTAAGGTTATAAT+TGG - Chr1:90654368-90654387 None:intergenic 20.0%
!!! ACTTGACTTATATTTTATCA+TGG + Chr1:90658366-90658385 MsG0180005350.01.T01:intron 20.0%
!!! ATCAAAGAAGTATAGTAATT+TGG + Chr1:90659897-90659916 MsG0180005350.01.T01:intron 20.0%
!!! ATGCCTTTTGATTAAAATTA+AGG + Chr1:90663374-90663393 MsG0180005350.01.T01:intron 20.0%
!!! ATGGCTTATTTTTATAATAC+TGG + Chr1:90660490-90660509 MsG0180005350.01.T01:intron 20.0%
!!! ATGTCATTTTTTCACTTTAT+AGG - Chr1:90653973-90653992 None:intergenic 20.0%
!!! ATTTGGGATATTTTCATAAT+TGG - Chr1:90654208-90654227 None:intergenic 20.0%
!!! ATTTTGAACTCAAGTTAAAA+GGG + Chr1:90664082-90664101 MsG0180005350.01.T01:intron 20.0%
!!! ATTTTTATAATACTGGATAC+CGG + Chr1:90660497-90660516 MsG0180005350.01.T01:intron 20.0%
!!! CCATTTTTCGATTAAATTTA+GGG - Chr1:90661342-90661361 None:intergenic 20.0%
!!! GTCTTTGTTTATAGAATTTA+TGG + Chr1:90660699-90660718 MsG0180005350.01.T01:intron 20.0%
!!! TCATTTTACTAAGAACAATT+TGG - Chr1:90664371-90664390 None:intergenic 20.0%
!!! TCCATTTTTCGATTAAATTT+AGG - Chr1:90661343-90661362 None:intergenic 20.0%
!!! TTAGTTTTAACATGTTTTTG+AGG + Chr1:90659570-90659589 MsG0180005350.01.T01:intron 20.0%
!!! TTTGGGATATTTTCATAATT+GGG - Chr1:90654207-90654226 None:intergenic 20.0%
!!! TTTTATTCACTTTCTGATTT+TGG + Chr1:90663256-90663275 MsG0180005350.01.T01:CDS 20.0%
!!! TTTTGTTTATAGTTTCCTTT+AGG + Chr1:90654971-90654990 MsG0180005350.01.T01:intron 20.0%
! AAATAAGGAATCGAGATAAA+AGG + Chr1:90654873-90654892 MsG0180005350.01.T01:intron 25.0%
! AACAATGTCTTGAATTTACA+TGG + Chr1:90663408-90663427 MsG0180005350.01.T01:intron 25.0%
! AACATAGATAATCGTGTTTA+AGG + Chr1:90664008-90664027 MsG0180005350.01.T01:intron 25.0%
! AACATTCATTATCTTCAACT+AGG + Chr1:90656436-90656455 MsG0180005350.01.T01:intron 25.0%
! AATGTTTGCAATTACCTTAT+AGG + Chr1:90664479-90664498 MsG0180005350.01.T01:intron 25.0%
! ACATAGATAATCGTGTTTAA+GGG + Chr1:90664009-90664028 MsG0180005350.01.T01:intron 25.0%
! ACATTAGAAAGAGAAAAAGA+AGG + Chr1:90658523-90658542 MsG0180005350.01.T01:intron 25.0%
! ACATTCATTATCTTCAACTA+GGG + Chr1:90656437-90656456 MsG0180005350.01.T01:intron 25.0%
! ACCTTATCTATAATCTATGT+GGG + Chr1:90660586-90660605 MsG0180005350.01.T01:intron 25.0%
! ACGGAACATATATTTCTTAA+TGG - Chr1:90663839-90663858 None:intergenic 25.0%
! AGAATTTCTTCTTCTATATC+TGG - Chr1:90662255-90662274 None:intergenic 25.0%
! AGACTATTCATTTGAAGATT+TGG + Chr1:90660923-90660942 MsG0180005350.01.T01:intron 25.0%
! ATACTGAAATCACAAAGAAA+AGG - Chr1:90658794-90658813 None:intergenic 25.0%
! ATATTTCTTTACGTCTTACA+TGG + Chr1:90655744-90655763 MsG0180005350.01.T01:intron 25.0%
! ATTAATTCAGACAAGTACAT+TGG + Chr1:90664210-90664229 MsG0180005350.01.T01:CDS 25.0%
! ATTCCATACAAGGAAAAAAA+AGG + Chr1:90660108-90660127 MsG0180005350.01.T01:intron 25.0%
! ATTTGAAGATTTGGAAATTG+AGG + Chr1:90660932-90660951 MsG0180005350.01.T01:intron 25.0%
! CCAACAAAATAACATTATGA+TGG - Chr1:90654394-90654413 None:intergenic 25.0%
! CCATAAATAAAGGGAAATAA+AGG - Chr1:90653747-90653766 None:intergenic 25.0%
! CCCTAAATTTAATCGAAAAA+TGG + Chr1:90661339-90661358 MsG0180005350.01.T01:intron 25.0%
! CGAGATGTCTATATTTAATT+TGG - Chr1:90655254-90655273 None:intergenic 25.0%
! CGATTATCTATGTTACAAAA+TGG - Chr1:90664002-90664021 None:intergenic 25.0%
! CTCATGTATGTGTTAAATTA+TGG + Chr1:90655517-90655536 MsG0180005350.01.T01:intron 25.0%
! CTTATCAAAGAAGGTTAAAT+AGG + Chr1:90662434-90662453 MsG0180005350.01.T01:intron 25.0%
! GAAGTTAAACCGATAAAATA+AGG + Chr1:90654858-90654877 MsG0180005350.01.T01:intron 25.0%
! GAATTAACGCAATAAGAATA+AGG + Chr1:90654626-90654645 MsG0180005350.01.T01:intron 25.0%
! GGAAATTACTATACATAAGT+TGG + Chr1:90655568-90655587 MsG0180005350.01.T01:intron 25.0%
! GGACTCTAAATATCATAAAT+TGG - Chr1:90656297-90656316 None:intergenic 25.0%
! GGTGAAGAACATAATTTATT+TGG + Chr1:90662314-90662333 MsG0180005350.01.T01:intron 25.0%
! GGTTCAATATATAAACAAGA+AGG + Chr1:90661504-90661523 MsG0180005350.01.T01:intron 25.0%
! GTTAAGATCTAAATAGAGTA+AGG + Chr1:90653766-90653785 MsG0180005350.01.T01:intron 25.0%
! TAAATTATGTTCTTCACCTA+AGG - Chr1:90662312-90662331 None:intergenic 25.0%
! TAACTGATTAAACTTTACAG+GGG - Chr1:90656889-90656908 None:intergenic 25.0%
! TAATGACTTTGATATGGATT+GGG + Chr1:90661669-90661688 MsG0180005350.01.T01:CDS 25.0%
! TATAACAAGAAGATATGTAG+TGG - Chr1:90653420-90653439 None:intergenic 25.0%
! TATGGACATAATTCAATGTT+CGG + Chr1:90659079-90659098 MsG0180005350.01.T01:intron 25.0%
! TCATTCCAATTTCATTTCAT+GGG - Chr1:90657290-90657309 None:intergenic 25.0%
! TGAATTAATCTCGTACTTAT+AGG - Chr1:90664199-90664218 None:intergenic 25.0%
! TGCATATACACTCAAATATA+AGG + Chr1:90661757-90661776 MsG0180005350.01.T01:intron 25.0%
! TGTAGTTTATTATATCTGCT+AGG + Chr1:90659999-90660018 MsG0180005350.01.T01:intron 25.0%
! TTATAAAAATAAGCCATGCA+AGG - Chr1:90660487-90660506 None:intergenic 25.0%
! TTCACATGCAAATATTTGAA+TGG - Chr1:90660026-90660045 None:intergenic 25.0%
! TTCATTCCAATTTCATTTCA+TGG - Chr1:90657291-90657310 None:intergenic 25.0%
! TTCGTTACGAGATTTATAAT+TGG + Chr1:90654947-90654966 MsG0180005350.01.T01:intron 25.0%
! TTGTTCAACAATCAACAATA+TGG + Chr1:90658820-90658839 MsG0180005350.01.T01:intron 25.0%
! TTTAGTGCAAACCAATTAAA+TGG - Chr1:90659874-90659893 None:intergenic 25.0%
!! AAAGAAGTATAGTAATTTGG+AGG + Chr1:90659900-90659919 MsG0180005350.01.T01:intron 25.0%
!! AAATTTAGATATGTTTGGTG+TGG + Chr1:90658031-90658050 MsG0180005350.01.T01:intron 25.0%
!! AAGCTATCTAGAATGATTAA+TGG + Chr1:90662522-90662541 MsG0180005350.01.T01:intron 25.0%
!! AATTAGAGAAAGGTTTTTGA+TGG + Chr1:90664141-90664160 MsG0180005350.01.T01:intron 25.0%
!! AATTTTGTGTGTAGAATTGA+CGG + Chr1:90659328-90659347 MsG0180005350.01.T01:intron 25.0%
!! ACATATGGTATTTTATGAAC+AGG + Chr1:90664997-90665016 MsG0180005350.01.T01:three_prime_UTR 25.0%
!! AGCAATGAATATTAGTTTGA+AGG + Chr1:90662365-90662384 MsG0180005350.01.T01:intron 25.0%
!! AGCTATCTAGAATGATTAAT+GGG + Chr1:90662523-90662542 MsG0180005350.01.T01:intron 25.0%
!! ATCTTATCTCAAAAAAGCAT+TGG + Chr1:90663665-90663684 MsG0180005350.01.T01:intron 25.0%
!! ATGGAGTATTACCAATTATA+AGG - Chr1:90659820-90659839 None:intergenic 25.0%
!! ATTTTTCTCATTGAAGATGT+TGG + Chr1:90659031-90659050 MsG0180005350.01.T01:intron 25.0%
!! CCCTTTATTTATGTTTAAGA+TGG + Chr1:90653680-90653699 MsG0180005350.01.T01:intron 25.0%
!! CCTTTATTTCCCTTTATTTA+TGG + Chr1:90653744-90653763 MsG0180005350.01.T01:intron 25.0%
!! CTAAAGGATTTTATCTTTGA+AGG - Chr1:90662191-90662210 None:intergenic 25.0%
!! GATTTTGAACTCAAGTTAAA+AGG + Chr1:90664081-90664100 MsG0180005350.01.T01:intron 25.0%
!! TAGCCATGTTGTTTATTTAA+TGG - Chr1:90655060-90655079 None:intergenic 25.0%
!! TAGCTGATTTATATTGTGTT+CGG + Chr1:90656041-90656060 MsG0180005350.01.T01:intron 25.0%
!! TATAAAATTTTCTGCACTGA+CGG + Chr1:90661971-90661990 MsG0180005350.01.T01:intron 25.0%
!! TGATCTGTCTCAATTTTATT+TGG + Chr1:90661073-90661092 MsG0180005350.01.T01:intron 25.0%
!! TTGATTTCTTGTTTGTATTG+TGG - Chr1:90657141-90657160 None:intergenic 25.0%
!! TTTAATTTACAACTATGGAG+TGG - Chr1:90665109-90665128 None:intergenic 25.0%
!! TTTTCTATTAGAGTATGTGT+GGG + Chr1:90661616-90661635 MsG0180005350.01.T01:intron 25.0%
!! TTTTTCTCATTGAAGATGTT+GGG + Chr1:90659032-90659051 MsG0180005350.01.T01:intron 25.0%
!!! AAAAAAGCATTGGTCAAAAT+TGG + Chr1:90663675-90663694 MsG0180005350.01.T01:intron 25.0%
!!! AATCCTTTTTTATATCTTGC+CGG - Chr1:90658106-90658125 None:intergenic 25.0%
!!! AGATCTCTTGTTTTATCATA+TGG - Chr1:90663649-90663668 None:intergenic 25.0%
!!! ATCTCGATTCCTTATTTTAT+CGG - Chr1:90654870-90654889 None:intergenic 25.0%
!!! ATGATTAGTCTACTAACATA+TGG - Chr1:90659839-90659858 None:intergenic 25.0%
!!! CAAAAAGGTACTTTATTGTA+TGG + Chr1:90659153-90659172 MsG0180005350.01.T01:intron 25.0%
!!! CCATCATAATGTTATTTTGT+TGG + Chr1:90654391-90654410 MsG0180005350.01.T01:intron 25.0%
!!! GATCTGTCTCAATTTTATTT+GGG + Chr1:90661074-90661093 MsG0180005350.01.T01:intron 25.0%
!!! TACTAGATTTTTGTTGTTGA+CGG + Chr1:90654811-90654830 MsG0180005350.01.T01:intron 25.0%
!!! TATCAAGTTGATACATCTAA+TGG - Chr1:90663728-90663747 None:intergenic 25.0%
!!! TGATATTTTTAGACAACACA+AGG - Chr1:90656272-90656291 None:intergenic 25.0%
!!! TTAAAACCTAGTTGATAGAT+TGG + Chr1:90665022-90665041 MsG0180005350.01.T01:three_prime_UTR 25.0%
!!! TTATTGATGTCTTATTTCTG+AGG + Chr1:90663798-90663817 MsG0180005350.01.T01:intron 25.0%
!!! TTTTGATTTGAAAGAATCAC+AGG - Chr1:90662746-90662765 None:intergenic 25.0%
!!! TTTTTGAGGTTTATGATTTG+TGG + Chr1:90659584-90659603 MsG0180005350.01.T01:intron 25.0%
AAAAAAGGATTAACGATTGG+AGG + Chr1:90657822-90657841 MsG0180005350.01.T01:intron 30.0%
AAAAAGGATTAACGATTGGA+GGG + Chr1:90657823-90657842 MsG0180005350.01.T01:intron 30.0%
AAAATGGTTACTCGTGTTAA+AGG - Chr1:90662092-90662111 None:intergenic 30.0%
AAACCTTCTCTCAATATTTG+AGG + Chr1:90653831-90653850 MsG0180005350.01.T01:intron 30.0%
AAAGAAAAGGAGACATTAAG+GGG - Chr1:90658781-90658800 None:intergenic 30.0%
AAATTGCTATGACGTATTGA+AGG + Chr1:90655159-90655178 MsG0180005350.01.T01:intron 30.0%
AACAACATGGCTACTATAAA+AGG + Chr1:90655067-90655086 MsG0180005350.01.T01:intron 30.0%
AACAGATGCTATAGATTTAC+TGG + Chr1:90662765-90662784 MsG0180005350.01.T01:CDS 30.0%
AACCTTCTCTCAATATTTGA+GGG + Chr1:90653832-90653851 MsG0180005350.01.T01:intron 30.0%
AACGTTGCTGTAAATATAAC+TGG + Chr1:90654663-90654682 MsG0180005350.01.T01:intron 30.0%
AATTTAGTGTAAACTTACCC+AGG - Chr1:90661727-90661746 None:intergenic 30.0%
ACAAAGAAAAGGAGACATTA+AGG - Chr1:90658783-90658802 None:intergenic 30.0%
ACACACAAAATTCATATGCA+AGG - Chr1:90659320-90659339 None:intergenic 30.0%
ACCAAAAACTACAAACTCTA+GGG - Chr1:90662999-90663018 None:intergenic 30.0%
ACCAATTATAAGGCAATAAG+TGG - Chr1:90659810-90659829 None:intergenic 30.0%
ACGTCATCAAATTAGCAAAA+TGG - Chr1:90657741-90657760 None:intergenic 30.0%
ACTTCTGAGCAACAAATTAA+TGG - Chr1:90662657-90662676 None:intergenic 30.0%
AGAAGAACACGATAAAGAAT+AGG + Chr1:90657591-90657610 MsG0180005350.01.T01:intron 30.0%
AGAAGAGGAGAAATAGAAAA+AGG - Chr1:90653552-90653571 None:intergenic 30.0%
AGAGAAACATAGAAGAAATC+TGG - Chr1:90659406-90659425 None:intergenic 30.0%
AGCTTAAGGTTATAATTGGA+AGG - Chr1:90654364-90654383 None:intergenic 30.0%
AGCTTTCTCAATACCAAATA+GGG + Chr1:90655819-90655838 MsG0180005350.01.T01:intron 30.0%
AGGAACTTCAAAAAGAGTAA+GGG + Chr1:90653717-90653736 MsG0180005350.01.T01:intron 30.0%
AGGCATTAGCATATAATTCA+AGG - Chr1:90663360-90663379 None:intergenic 30.0%
AGTATCTACAGCAACAAAAA+TGG - Chr1:90662108-90662127 None:intergenic 30.0%
ATAATCGTGTTTAAGGGTTT+AGG + Chr1:90664015-90664034 MsG0180005350.01.T01:intron 30.0%
ATAGAATTTATGGGCAACAA+TGG + Chr1:90660709-90660728 MsG0180005350.01.T01:intron 30.0%
ATATAAACAAGAAGGAACTG+AGG + Chr1:90661512-90661531 MsG0180005350.01.T01:intron 30.0%
ATCAAATTAGCAAAATGGCA+TGG - Chr1:90657736-90657755 None:intergenic 30.0%
ATCAGGTATCTTATCAAAGA+AGG + Chr1:90662425-90662444 MsG0180005350.01.T01:intron 30.0%
ATGGCTTAACATTAAAAGGA+AGG + Chr1:90660742-90660761 MsG0180005350.01.T01:CDS 30.0%
ATGTTGAGTGAACAATTCTT+AGG + Chr1:90658929-90658948 MsG0180005350.01.T01:intron 30.0%
CAAAGAAAAGGAGACATTAA+GGG - Chr1:90658782-90658801 None:intergenic 30.0%
CAATCAACAATATGGAGTAA+AGG + Chr1:90658828-90658847 MsG0180005350.01.T01:intron 30.0%
CAATCCATATCAAAGTCATT+AGG - Chr1:90661670-90661689 None:intergenic 30.0%
CATTCATTATCTTCAACTAG+GGG + Chr1:90656438-90656457 MsG0180005350.01.T01:intron 30.0%
CCAATTATAAGGCAATAAGT+GGG - Chr1:90659809-90659828 None:intergenic 30.0%
CTAATGACTTTGATATGGAT+TGG + Chr1:90661668-90661687 MsG0180005350.01.T01:CDS 30.0%
CTATCATATCCTATATGAAC+CGG + Chr1:90658084-90658103 MsG0180005350.01.T01:intron 30.0%
CTTGTGAAAGAATTAGAGAA+AGG + Chr1:90664131-90664150 MsG0180005350.01.T01:intron 30.0%
CTTTGTGATTTCAGTATAGT+AGG + Chr1:90658797-90658816 MsG0180005350.01.T01:intron 30.0%
GAAACATATTCAGAACATGA+AGG + Chr1:90662903-90662922 MsG0180005350.01.T01:CDS 30.0%
GAAGAACACGATAAAGAATA+GGG + Chr1:90657592-90657611 MsG0180005350.01.T01:intron 30.0%
GACCTTATCTATAATCTATG+TGG + Chr1:90660585-90660604 MsG0180005350.01.T01:intron 30.0%
GATTAGTAAGCTATCTAGAA+TGG + Chr1:90662515-90662534 MsG0180005350.01.T01:intron 30.0%
GATTTGGAAATTGAGGATTA+TGG + Chr1:90660939-90660958 MsG0180005350.01.T01:intron 30.0%
GCAAATGGCTTAACATTAAA+AGG + Chr1:90660738-90660757 MsG0180005350.01.T01:CDS 30.0%
GCTCCATTAAATAAACAACA+TGG + Chr1:90655054-90655073 MsG0180005350.01.T01:intron 30.0%
GGGTTATACTTACAAATTGT+TGG - Chr1:90654187-90654206 None:intergenic 30.0%
TAATCGTGTTTAAGGGTTTA+GGG + Chr1:90664016-90664035 MsG0180005350.01.T01:intron 30.0%
TATTAGAAAGCGATAGTGAA+TGG + Chr1:90662274-90662293 MsG0180005350.01.T01:intron 30.0%
TATTAGCTGTACAATCCATT+CGG + Chr1:90655902-90655921 MsG0180005350.01.T01:intron 30.0%
TATTTCCACTCATAAAGTTG+AGG - Chr1:90655000-90655019 None:intergenic 30.0%
TCAAACATGAATGCATATGA+CGG - Chr1:90656244-90656263 None:intergenic 30.0%
TCAAATTAGCAAAATGGCAT+GGG - Chr1:90657735-90657754 None:intergenic 30.0%
TCATATGCAAGGACAAATTA+AGG - Chr1:90659309-90659328 None:intergenic 30.0%
TCCCACATAGATTATAGATA+AGG - Chr1:90660590-90660609 None:intergenic 30.0%
TCTGATGGTTTAAACTTTGA+TGG - Chr1:90662227-90662246 None:intergenic 30.0%
TGAATATGCTAACAAACACT+TGG + Chr1:90653875-90653894 MsG0180005350.01.T01:intron 30.0%
TGAGATTACTGAGTTACAAA+AGG + Chr1:90664533-90664552 MsG0180005350.01.T01:CDS 30.0%
TGAGTGGAAATATGTTTAAG+TGG + Chr1:90655008-90655027 MsG0180005350.01.T01:intron 30.0%
TGGAATTTAGCAACATAATC+TGG + Chr1:90664703-90664722 MsG0180005350.01.T01:exon 30.0%
TTAACCGATTAAACTTTGCA+GGG + Chr1:90657793-90657812 MsG0180005350.01.T01:intron 30.0%
TTAATCTCGTACTTATAGGT+TGG - Chr1:90664195-90664214 None:intergenic 30.0%
TTCACCTAATGACTTTGATA+TGG + Chr1:90661663-90661682 MsG0180005350.01.T01:CDS 30.0%
TTCATTGCTTCATCTATGAT+TGG - Chr1:90662354-90662373 None:intergenic 30.0%
TTGCAGAAGAATAATTGGTT+CGG + Chr1:90663598-90663617 MsG0180005350.01.T01:intron 30.0%
TTTAACCGATTAAACTTTGC+AGG + Chr1:90657792-90657811 MsG0180005350.01.T01:intron 30.0%
TTTCTATTAGAGTATGTGTG+GGG + Chr1:90661617-90661636 MsG0180005350.01.T01:intron 30.0%
! AACTCTAGGGAAAATTTCAA+AGG - Chr1:90662986-90663005 None:intergenic 30.0%
! AAGTCTTTCAGTATCCTTTT+AGG - Chr1:90654741-90654760 None:intergenic 30.0%
! AATTTCACCTAAACCTGTTT+TGG + Chr1:90658641-90658660 MsG0180005350.01.T01:intron 30.0%
! AGCATTTCGTTTGATTTCAT+CGG - Chr1:90663206-90663225 None:intergenic 30.0%
! AGTCTTTCAGTATCCTTTTA+GGG - Chr1:90654740-90654759 None:intergenic 30.0%
! AGTGTTTTATATACACTTGG+TGG + Chr1:90662003-90662022 MsG0180005350.01.T01:intron 30.0%
! AGTTGATACATCTAATGGAA+GGG - Chr1:90663723-90663742 None:intergenic 30.0%
! ATGATGGTCAAATTAGCTTA+AGG - Chr1:90654378-90654397 None:intergenic 30.0%
! ATTTCACCTAAACCTGTTTT+GGG + Chr1:90658642-90658661 MsG0180005350.01.T01:intron 30.0%
! CGAATTAAGTTTTCCCATTT+CGG - Chr1:90662140-90662159 None:intergenic 30.0%
! CTTTTCTATTAGAGTATGTG+TGG + Chr1:90661615-90661634 MsG0180005350.01.T01:intron 30.0%
! GACTGTATGATTTGTACATA+TGG + Chr1:90664982-90665001 MsG0180005350.01.T01:three_prime_UTR 30.0%
! GAGACAAACTTCTTTTAAAC+CGG + Chr1:90662683-90662702 MsG0180005350.01.T01:intron 30.0%
! GTTGACCAAATTTGATAACA+TGG - Chr1:90656943-90656962 None:intergenic 30.0%
! TAGAGTTTTCTCATCTAGAT+TGG - Chr1:90654152-90654171 None:intergenic 30.0%
! TATTGTATGGTAGTGAAAAG+TGG + Chr1:90659166-90659185 MsG0180005350.01.T01:intron 30.0%
! TCATGATCCAAGATACTTTT+GGG - Chr1:90663286-90663305 None:intergenic 30.0%
! TTTCTTGTCTTATTGAGAAG+AGG - Chr1:90653635-90653654 None:intergenic 30.0%
! TTTGAAACTGAAGCAAAAGA+AGG - Chr1:90660228-90660247 None:intergenic 30.0%
! TTTTCCGTAACCTTTACTTT+CGG + Chr1:90664792-90664811 MsG0180005350.01.T01:intron 30.0%
! TTTTCTCATTGAAGATGTTG+GGG + Chr1:90659033-90659052 MsG0180005350.01.T01:intron 30.0%
! TTTTGACAATTCTTCCTGTT+AGG + Chr1:90661297-90661316 MsG0180005350.01.T01:intron 30.0%
!! AAGATATGTAGTGGATTAGT+AGG - Chr1:90653411-90653430 None:intergenic 30.0%
!! AAGTTGATACATCTAATGGA+AGG - Chr1:90663724-90663743 None:intergenic 30.0%
!! AATTTGTTGCTCAGAAGTAT+TGG + Chr1:90662659-90662678 MsG0180005350.01.T01:intron 30.0%
!! ACTTTTTAACTAGTATCTCG+AGG - Chr1:90658142-90658161 None:intergenic 30.0%
!! CATTTTAACAGCTCTATTAG+AGG - Chr1:90658336-90658355 None:intergenic 30.0%
!! CTGCACTAGTTTAAAGTTTT+TGG + Chr1:90657992-90658011 MsG0180005350.01.T01:intron 30.0%
!! TCGAGATAAAAGGTACTATT+TGG + Chr1:90654883-90654902 MsG0180005350.01.T01:intron 30.0%
!! TTTCTTATAGGACTAGTTGT+GGG + Chr1:90658736-90658755 MsG0180005350.01.T01:intron 30.0%
!!! AAGCCTTTTTTTTCCTTGTA+TGG - Chr1:90660114-90660133 None:intergenic 30.0%
!!! ATTTGGTTTTGTCTATCTCA+GGG + Chr1:90654900-90654919 MsG0180005350.01.T01:intron 30.0%
!!! ATTTTGCTAATTTGATGACG+TGG + Chr1:90657740-90657759 MsG0180005350.01.T01:intron 30.0%
!!! TATTTGGTTTTGTCTATCTC+AGG + Chr1:90654899-90654918 MsG0180005350.01.T01:intron 30.0%
!!! TTTTGAAGTTCCTCTTATAC+TGG - Chr1:90653710-90653729 None:intergenic 30.0%
AAAGAGAAGAAGATGAAGAG+AGG - Chr1:90656991-90657010 None:intergenic 35.0%
AACATGAAGGTTTCAACTGT+TGG + Chr1:90662916-90662935 MsG0180005350.01.T01:CDS 35.0%
AAGAGAAGAAGATGAAGAGA+GGG - Chr1:90656990-90657009 None:intergenic 35.0%
AAGTATGATCTCTCTTAAGG+AGG + Chr1:90655328-90655347 MsG0180005350.01.T01:intron 35.0%
AAGTCGTCCAAAATCACTTA+TGG - Chr1:90659550-90659569 None:intergenic 35.0%
AAGTGATCAAATTGAGGCAA+AGG + Chr1:90657907-90657926 MsG0180005350.01.T01:intron 35.0%
ACAAAGCCAATCTATCAACT+AGG - Chr1:90665031-90665050 None:intergenic 35.0%
ACAATTCTTAGGCCAACATA+CGG + Chr1:90658940-90658959 MsG0180005350.01.T01:intron 35.0%
AGAACAAGAACAAGCAAAAG+AGG - Chr1:90660201-90660220 None:intergenic 35.0%
AGAATTGTTCACTCAACATG+TGG - Chr1:90658928-90658947 None:intergenic 35.0%
AGATCATACCCCAAAATTCT+AGG - Chr1:90655947-90655966 None:intergenic 35.0%
ATAACATGGCAGTCATTAAC+TGG - Chr1:90656929-90656948 None:intergenic 35.0%
ATAGTCTTCTGCTAATGACA+CGG - Chr1:90660910-90660929 None:intergenic 35.0%
ATCCATTTCTCACATCTATG+TGG - Chr1:90655782-90655801 None:intergenic 35.0%
ATGCAAGGACAAATTAAGGT+CGG - Chr1:90659305-90659324 None:intergenic 35.0%
ATGGAAGAGATGGATACAAT+TGG - Chr1:90657116-90657135 None:intergenic 35.0%
ATGGGACTGAAAAGATTCAT+CGG + Chr1:90662541-90662560 MsG0180005350.01.T01:intron 35.0%
ATGTTCGTGAAATACATCAG+AGG + Chr1:90663227-90663246 MsG0180005350.01.T01:CDS 35.0%
ATTAGGACGTCACAGTTATT+TGG - Chr1:90659011-90659030 None:intergenic 35.0%
ATTTGGAGGATAAAACAGAG+TGG + Chr1:90659914-90659933 MsG0180005350.01.T01:intron 35.0%
CAACAAATTAATGGTGGCTT+TGG - Chr1:90662648-90662667 None:intergenic 35.0%
CAACTAAGTAACAAGATGAG+TGG - Chr1:90656687-90656706 None:intergenic 35.0%
CATCATCATCATCATCATCA+GGG - Chr1:90660790-90660809 None:intergenic 35.0%
CATGATCAACGCTTTCTTAT+AGG + Chr1:90658724-90658743 MsG0180005350.01.T01:intron 35.0%
CATGCAGGAAAGGAATTATT+AGG + Chr1:90659212-90659231 MsG0180005350.01.T01:intron 35.0%
CCCACTTATTGCCTTATAAT+TGG + Chr1:90659806-90659825 MsG0180005350.01.T01:intron 35.0%
CGTATTCTATCACATGGAAA+TGG + Chr1:90664508-90664527 MsG0180005350.01.T01:CDS 35.0%
CTAACTCATCCTTACAAAAC+CGG + Chr1:90660378-90660397 MsG0180005350.01.T01:intron 35.0%
CTTTACAGGGGCAAAAAAAA+AGG - Chr1:90656877-90656896 None:intergenic 35.0%
GAACCGGCAAGATATAAAAA+AGG + Chr1:90658100-90658119 MsG0180005350.01.T01:intron 35.0%
GAAGAAGTCATGACAAGTTT+CGG + Chr1:90664676-90664695 MsG0180005350.01.T01:CDS 35.0%
GACCAAAAACTACAAACTCT+AGG - Chr1:90663000-90663019 None:intergenic 35.0%
GACTGCCATGTTATCAAATT+TGG + Chr1:90656935-90656954 MsG0180005350.01.T01:intron 35.0%
GAGCTTTCTCAATACCAAAT+AGG + Chr1:90655818-90655837 MsG0180005350.01.T01:intron 35.0%
GAGGAACTTCAAAAAGAGTA+AGG + Chr1:90653716-90653735 MsG0180005350.01.T01:intron 35.0%
GATTAGTAGGTATACTGATC+AGG - Chr1:90653398-90653417 None:intergenic 35.0%
GGTGAAATTCACGTATCTTT+AGG - Chr1:90658630-90658649 None:intergenic 35.0%
GGTTTAAACTTTGATGGAGA+TGG - Chr1:90662221-90662240 None:intergenic 35.0%
GTGGTATTTGAATCATCACT+TGG - Chr1:90665090-90665109 None:intergenic 35.0%
GTTGCATCTTCAAATACTGT+CGG + Chr1:90660169-90660188 MsG0180005350.01.T01:intron 35.0%
TAAAGTGCAAAAGCCCTAAA+AGG + Chr1:90654724-90654743 MsG0180005350.01.T01:intron 35.0%
TAACATGGCAGTCATTAACT+GGG - Chr1:90656928-90656947 None:intergenic 35.0%
TAACCGATTAAACTTTGCAG+GGG + Chr1:90657794-90657813 MsG0180005350.01.T01:intron 35.0%
TAGATAAGAGCAATGAAGCA+TGG - Chr1:90655699-90655718 None:intergenic 35.0%
TATCATATGGCAAGCTGATA+CGG - Chr1:90663636-90663655 None:intergenic 35.0%
TCATCACTTGGAAATTCACA+TGG - Chr1:90665078-90665097 None:intergenic 35.0%
TCATCATCATCATCATCATC+AGG - Chr1:90660791-90660810 None:intergenic 35.0%
TCATTGTCTGAATCAGTTTC+AGG - Chr1:90660824-90660843 None:intergenic 35.0%
TCTCTCAAAAGTCGAATATG+TGG - Chr1:90661367-90661386 None:intergenic 35.0%
TCTGAGCAACAAATTAATGG+TGG - Chr1:90662654-90662673 None:intergenic 35.0%
TGCAGATCGTAAGAAAAAGA+GGG - Chr1:90657014-90657033 None:intergenic 35.0%
TGCTGAAATTCTGTATTCAC+TGG + Chr1:90663530-90663549 MsG0180005350.01.T01:intron 35.0%
TGTGTGATGAATGATGATTC+TGG + Chr1:90661031-90661050 MsG0180005350.01.T01:intron 35.0%
TGTTAGGCCATTCAAAATTG+TGG + Chr1:90661313-90661332 MsG0180005350.01.T01:intron 35.0%
TTAAACTTTGATGGAGATGG+AGG - Chr1:90662218-90662237 None:intergenic 35.0%
TTCAAGCTAGTATAATGCGT+TGG + Chr1:90661232-90661251 MsG0180005350.01.T01:intron 35.0%
TTGAGGGTCATTTCGTTTAA+GGG + Chr1:90653848-90653867 MsG0180005350.01.T01:intron 35.0%
TTGCAGATCGTAAGAAAAAG+AGG - Chr1:90657015-90657034 None:intergenic 35.0%
TTGGTATTCATGTTCTACGA+AGG + Chr1:90655292-90655311 MsG0180005350.01.T01:intron 35.0%
TTGTGAGTATTTGGAAACTG+AGG + Chr1:90660632-90660651 MsG0180005350.01.T01:intron 35.0%
TTGTGCTATCAAATGCATGT+AGG + Chr1:90657944-90657963 MsG0180005350.01.T01:intron 35.0%
TTTAGCAACATAATCTGGAC+AGG + Chr1:90664708-90664727 MsG0180005350.01.T01:exon 35.0%
TTTCTCATTGAAGATGTTGG+GGG + Chr1:90659034-90659053 MsG0180005350.01.T01:intron 35.0%
TTTGAGGGTCATTTCGTTTA+AGG + Chr1:90653847-90653866 MsG0180005350.01.T01:intron 35.0%
TTTGCAGGGGCAAAAAAAAA+AGG + Chr1:90657807-90657826 MsG0180005350.01.T01:intron 35.0%
! AAGCTATCTAGAATGGTAGT+GGG + Chr1:90662598-90662617 MsG0180005350.01.T01:intron 35.0%
! ACAATTTTGAATGGCCTAAC+AGG - Chr1:90661314-90661333 None:intergenic 35.0%
! AGAGAAAGGTTTTTGATGGA+TGG + Chr1:90664145-90664164 MsG0180005350.01.T01:intron 35.0%
! AGGGAATCCACAATTTTGAA+TGG - Chr1:90661323-90661342 None:intergenic 35.0%
! AGTTGGTGTTTGTGAGTATT+TGG + Chr1:90660623-90660642 MsG0180005350.01.T01:intron 35.0%
! ATCTTGAAGCTTTGATGAAG+AGG + Chr1:90662797-90662816 MsG0180005350.01.T01:CDS 35.0%
! CTCATGATCCAAGATACTTT+TGG - Chr1:90663287-90663306 None:intergenic 35.0%
! GAAACTGATTCAGACAATGA+AGG + Chr1:90660824-90660843 MsG0180005350.01.T01:CDS 35.0%
! TAAGCTATCTAGAATGGTAG+TGG + Chr1:90662597-90662616 MsG0180005350.01.T01:intron 35.0%
! TAATGGAAGGGTATATTACC+TGG - Chr1:90663711-90663730 None:intergenic 35.0%
! TATGGGCTATATTGGTAACA+AGG + Chr1:90662948-90662967 MsG0180005350.01.T01:CDS 35.0%
! TCCCTAGAGTTTGTAGTTTT+TGG + Chr1:90662995-90663014 MsG0180005350.01.T01:intron 35.0%
! TCTTGTTTGTATTGTGGTGA+TGG - Chr1:90657135-90657154 None:intergenic 35.0%
! TGATGATGATGATGATGATG+AGG + Chr1:90660790-90660809 MsG0180005350.01.T01:CDS 35.0%
! TGGAAGTATGATCTCTCTTA+AGG + Chr1:90655325-90655344 MsG0180005350.01.T01:intron 35.0%
! TGGTATTTTCATCACGGTAT+GGG + Chr1:90662864-90662883 MsG0180005350.01.T01:CDS 35.0%
! TTCATTTTCGATCTCTGCAT+CGG - Chr1:90664659-90664678 None:intergenic 35.0%
! TTGGTATTTTCATCACGGTA+TGG + Chr1:90662863-90662882 MsG0180005350.01.T01:CDS 35.0%
! TTTAGTAACTTTGGCCTTCA+CGG + Chr1:90659498-90659517 MsG0180005350.01.T01:intron 35.0%
!! AAGAAAGCTTTGAAGTAGGA+AGG - Chr1:90657069-90657088 None:intergenic 35.0%
!! AATGTTCTTGGTCTTGTTCT+TGG + Chr1:90657638-90657657 MsG0180005350.01.T01:intron 35.0%
!! ATGATGATTCTGGTTCAGTT+TGG + Chr1:90661041-90661060 MsG0180005350.01.T01:intron 35.0%
!! ATGTTCTTGGTCTTGTTCTT+GGG + Chr1:90657639-90657658 MsG0180005350.01.T01:intron 35.0%
!! CTTTCTTATAGGACTAGTTG+TGG + Chr1:90658735-90658754 MsG0180005350.01.T01:intron 35.0%
!! GAAGAAGAAAGCTTTGAAGT+AGG - Chr1:90657073-90657092 None:intergenic 35.0%
!! GATGGTTGGTATTTTCATCA+CGG + Chr1:90662858-90662877 MsG0180005350.01.T01:CDS 35.0%
!! TATATCTTGCCGGTTCATAT+AGG - Chr1:90658096-90658115 None:intergenic 35.0%
!! TTCTTATAGGACTAGTTGTG+GGG + Chr1:90658737-90658756 MsG0180005350.01.T01:intron 35.0%
!!! ATGGTGTTGACCTAGAATTT+TGG + Chr1:90655934-90655953 MsG0180005350.01.T01:intron 35.0%
!!! GTTGTTTTTGTTCTTGTTGC+TGG + Chr1:90657550-90657569 MsG0180005350.01.T01:intron 35.0%
!!! TGAGTTTGTTTTGCCCTATT+TGG - Chr1:90655835-90655854 None:intergenic 35.0%
!!! TGGTGTTGACCTAGAATTTT+GGG + Chr1:90655935-90655954 MsG0180005350.01.T01:intron 35.0%
AAAATTGGTTGAGAGAGACC+AGG + Chr1:90663690-90663709 MsG0180005350.01.T01:intron 40.0%
AACAAGAAGGAACTGAGGTT+AGG + Chr1:90661517-90661536 MsG0180005350.01.T01:intron 40.0%
AACCACGTGAATAACATGAC+CGG + Chr1:90657310-90657329 MsG0180005350.01.T01:intron 40.0%
AAGGTTTCAACTGTTGGTGT+TGG + Chr1:90662922-90662941 MsG0180005350.01.T01:CDS 40.0%
ACACTCATCATCTTACAAGC+CGG - Chr1:90660543-90660562 None:intergenic 40.0%
AGAATACGATCGCACCTATA+AGG - Chr1:90664496-90664515 None:intergenic 40.0%
AGAGAAGAAGATGAAGAGAG+GGG - Chr1:90656989-90657008 None:intergenic 40.0%
AGATGGTACTCCAGTATAAG+AGG + Chr1:90653697-90653716 MsG0180005350.01.T01:intron 40.0%
AGCTAGTATAATGCGTTGGA+TGG + Chr1:90661236-90661255 MsG0180005350.01.T01:intron 40.0%
AGGCAAAAGTCATGACTGTA+AGG + Chr1:90661483-90661502 MsG0180005350.01.T01:intron 40.0%
ATAAAGTTGAGGCTCCCTAA+AGG - Chr1:90654989-90655008 None:intergenic 40.0%
ATAATGATGTCATATGGGGC+TGG - Chr1:90659368-90659387 None:intergenic 40.0%
ATATCCTGCACCGAAAGTAA+AGG - Chr1:90664805-90664824 None:intergenic 40.0%
ATCATCATCATCATCAGGGT+CGG - Chr1:90660786-90660805 None:intergenic 40.0%
ATCGAAAGTTTGGTCTGGTT+TGG + Chr1:90657506-90657525 MsG0180005350.01.T01:intron 40.0%
ATTCCTTTCCTGCATGTGAT+TGG - Chr1:90659208-90659227 None:intergenic 40.0%
ATTGGTGCATGTTATTCACG+TGG - Chr1:90657358-90657377 None:intergenic 40.0%
ATTTCCGCGAGGAAGATTAT+CGG + Chr1:90662464-90662483 MsG0180005350.01.T01:intron 40.0%
CAAACTAAAGCATACCATGC+TGG - Chr1:90664264-90664283 None:intergenic 40.0%
CACATCTTTAATGTCGGTGA+TGG - Chr1:90655723-90655742 None:intergenic 40.0%
CACGATAAAGAATAGGGAGA+AGG + Chr1:90657598-90657617 MsG0180005350.01.T01:intron 40.0%
CAGCAGAATTCAGATATGAG+AGG - Chr1:90661591-90661610 None:intergenic 40.0%
CATGCACCAATTTCAGAAAC+CGG + Chr1:90657367-90657386 MsG0180005350.01.T01:intron 40.0%
CATTCATCACACACAAGACA+TGG - Chr1:90661024-90661043 None:intergenic 40.0%
CATTTGATGCACAACGTGAA+TGG - Chr1:90657970-90657989 None:intergenic 40.0%
CGGTTCCCATGAAATGAAAT+TGG + Chr1:90657282-90657301 MsG0180005350.01.T01:intron 40.0%
CTATATCTGGCATCATCTGA+TGG - Chr1:90662242-90662261 None:intergenic 40.0%
CTCACCAATATTGTAAGTCC+AGG - Chr1:90656468-90656487 None:intergenic 40.0%
CTGACGAAGGAACATATATC+TGG + Chr1:90653481-90653500 MsG0180005350.01.T01:five_prime_UTR 40.0%
CTTTATATGCACCCACCTTA+CGG + Chr1:90663165-90663184 MsG0180005350.01.T01:CDS 40.0%
GAAAAGTGGCATAAAGCAAC+AGG + Chr1:90659180-90659199 MsG0180005350.01.T01:intron 40.0%
GAAGAGATGGATACAATTGG+TGG - Chr1:90657113-90657132 None:intergenic 40.0%
GAAGAGGGAATGAATGTTCT+TGG + Chr1:90657626-90657645 MsG0180005350.01.T01:intron 40.0%
GAATGAGAAGATGAAGACAG+GGG + Chr1:90657695-90657714 MsG0180005350.01.T01:intron 40.0%
GACCCTCAAATATTGAGAGA+AGG - Chr1:90653837-90653856 None:intergenic 40.0%
GGAATGAGAAGATGAAGACA+GGG + Chr1:90657694-90657713 MsG0180005350.01.T01:intron 40.0%
GTAACAAGATGAGTGGTCAA+TGG - Chr1:90656680-90656699 None:intergenic 40.0%
GTGATTCGTCCTTGCAAATA+GGG - Chr1:90657866-90657885 None:intergenic 40.0%
TAATGATGTCATATGGGGCT+GGG - Chr1:90659367-90659386 None:intergenic 40.0%
TAGCTACTAAATCCCCACAT+CGG + Chr1:90656746-90656765 MsG0180005350.01.T01:intron 40.0%
TCATTATCTTCAACTAGGGG+CGG + Chr1:90656441-90656460 MsG0180005350.01.T01:intron 40.0%
TGAGAACGATCTACAGAATC+AGG + Chr1:90662408-90662427 MsG0180005350.01.T01:intron 40.0%
TGATTCGTCCTTGCAAATAG+GGG - Chr1:90657865-90657884 None:intergenic 40.0%
TGCACCGAAAGTAAAGGTTA+CGG - Chr1:90664799-90664818 None:intergenic 40.0%
TGCGATCGTATTCTATCACA+TGG + Chr1:90664502-90664521 MsG0180005350.01.T01:CDS 40.0%
TGTGATTCGTCCTTGCAAAT+AGG - Chr1:90657867-90657886 None:intergenic 40.0%
TGTTCTGCAGATCAGTAAGA+AGG + Chr1:90657667-90657686 MsG0180005350.01.T01:intron 40.0%
TTAGCAAAATGGCATGGGAA+TGG - Chr1:90657730-90657749 None:intergenic 40.0%
TTCAGACAAGTACATTGGAG+AGG + Chr1:90664215-90664234 MsG0180005350.01.T01:CDS 40.0%
TTCTCATTGAAGATGTTGGG+GGG + Chr1:90659035-90659054 MsG0180005350.01.T01:intron 40.0%
TTGCCCCTGCAAAGTTTAAT+CGG - Chr1:90657800-90657819 None:intergenic 40.0%
TTTCTTTGTTCAGCCTTGCA+TGG + Chr1:90660331-90660350 MsG0180005350.01.T01:intron 40.0%
TTTGTAAGGATGAGTTAGGC+CGG - Chr1:90660376-90660395 None:intergenic 40.0%
! AAAACTGTCATTTCGCGTGT+GGG - Chr1:90656965-90656984 None:intergenic 40.0%
! AAGTTTTCCCATTTCGGTAC+AGG - Chr1:90662134-90662153 None:intergenic 40.0%
! ATCTCGTACTTATAGGTTGG+TGG - Chr1:90664192-90664211 None:intergenic 40.0%
! ATGACTTTTGCCTCCTTAAG+CGG - Chr1:90661476-90661495 None:intergenic 40.0%
! CTGTGAGCCATAAGTGATTT+TGG + Chr1:90659540-90659559 MsG0180005350.01.T01:intron 40.0%
! GAGCTGAAGTGTGTATTTTC+TGG + Chr1:90660672-90660691 MsG0180005350.01.T01:intron 40.0%
! TAAAACTGTCATTTCGCGTG+TGG - Chr1:90656966-90656985 None:intergenic 40.0%
! TGTCTGAAATCAGAACAAGC+CGG - Chr1:90660400-90660419 None:intergenic 40.0%
! TGTTCTGAATATGTTTCCGC+AGG - Chr1:90662900-90662919 None:intergenic 40.0%
! TTTTCCGATAATCTTCCTCG+CGG - Chr1:90662471-90662490 None:intergenic 40.0%
!! AACTGTTGGTGTTGGTGTTA+TGG + Chr1:90662930-90662949 MsG0180005350.01.T01:CDS 40.0%
!! ACTGTTGGTGTTGGTGTTAT+GGG + Chr1:90662931-90662950 MsG0180005350.01.T01:CDS 40.0%
!! AGTTTGGTCTGGTTTGGTTA+TGG + Chr1:90657512-90657531 MsG0180005350.01.T01:intron 40.0%
!! ATCCATTCGGATTGAGTTGA+TGG + Chr1:90655915-90655934 MsG0180005350.01.T01:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - Chr1:90660380-90660399 None:intergenic 40.0%
!! CTGCAAATTCTGTTTCTGCT+TGG + Chr1:90663506-90663525 MsG0180005350.01.T01:intron 40.0%
!! GAGTTTCCGGTTTCTGAAAT+TGG - Chr1:90657376-90657395 None:intergenic 40.0%
!! GTTGGTGTTATGGGCTATAT+TGG + Chr1:90662940-90662959 MsG0180005350.01.T01:CDS 40.0%
!! GTTTGGTCTGGTTTGGTTAT+GGG + Chr1:90657513-90657532 MsG0180005350.01.T01:intron 40.0%
!! GTTTTTGATGGATGGTCAGA+AGG + Chr1:90664153-90664172 MsG0180005350.01.T01:CDS 40.0%
!! TATTGTGGTGATGGAAGAGA+TGG - Chr1:90657126-90657145 None:intergenic 40.0%
!! TCTCGTACTTATAGGTTGGT+GGG - Chr1:90664191-90664210 None:intergenic 40.0%
!! TCTTACAAGCCGGTTTTGTA+AGG - Chr1:90660533-90660552 None:intergenic 40.0%
!! TGGACTTCCCAAAAGTATCT+TGG + Chr1:90663276-90663295 MsG0180005350.01.T01:CDS 40.0%
!!! GAAGTGTGTATTTTCTGGCT+TGG + Chr1:90660677-90660696 MsG0180005350.01.T01:intron 40.0%
!!! GGTGTTGACCTAGAATTTTG+GGG + Chr1:90655936-90655955 MsG0180005350.01.T01:intron 40.0%
AACAGGAACCAATCACATGC+AGG + Chr1:90659197-90659216 MsG0180005350.01.T01:intron 45.0%
AATGATGTCATATGGGGCTG+GGG - Chr1:90659366-90659385 None:intergenic 45.0%
ACACTTTCTCTCAGTCTCAG+TGG - Chr1:90653368-90653387 None:intergenic 45.0%
AGAATTTCTCCCGCTTAAGG+AGG + Chr1:90661463-90661482 MsG0180005350.01.T01:intron 45.0%
AGGGAGAAGGAAGAAGAAGA+GGG + Chr1:90657611-90657630 MsG0180005350.01.T01:intron 45.0%
ATACTCGTCCTGTACCGAAA+TGG + Chr1:90662123-90662142 MsG0180005350.01.T01:intron 45.0%
ATAGTGAGCAAGCAGATGGT+TGG + Chr1:90662844-90662863 MsG0180005350.01.T01:CDS 45.0%
ATCACACACATCACGACCAT+TGG - Chr1:90658701-90658720 None:intergenic 45.0%
ATGAATTGTGCTCCAGAGGA+AGG - Chr1:90663774-90663793 None:intergenic 45.0%
ATGACGTGGCAGTCATTAAC+TGG + Chr1:90657754-90657773 MsG0180005350.01.T01:intron 45.0%
ATGGTGAGGAGAGATTCCTT+AGG + Chr1:90662293-90662312 MsG0180005350.01.T01:intron 45.0%
CAACAATGGTCATGCGCAAA+TGG + Chr1:90660723-90660742 MsG0180005350.01.T01:CDS 45.0%
CACATATATGGCAGAGGTTG+AGG + Chr1:90664594-90664613 MsG0180005350.01.T01:CDS 45.0%
CACCATCAACTCAATCCGAA+TGG - Chr1:90655920-90655939 None:intergenic 45.0%
CGCCACATAGATGTGAGAAA+TGG + Chr1:90655777-90655796 MsG0180005350.01.T01:intron 45.0%
CGGACCTGGACTTACAATAT+TGG + Chr1:90656461-90656480 MsG0180005350.01.T01:intron 45.0%
CTCAACCTCTGCCATATATG+TGG - Chr1:90664596-90664615 None:intergenic 45.0%
GAAAGCGATAGTGAATGGTG+AGG + Chr1:90662279-90662298 MsG0180005350.01.T01:intron 45.0%
GAACCAATCACATGCAGGAA+AGG + Chr1:90659202-90659221 MsG0180005350.01.T01:intron 45.0%
GAAGAGGATCAGAGCAGATA+CGG + Chr1:90657462-90657481 MsG0180005350.01.T01:intron 45.0%
GAAGATAGTGAGCAAGCAGA+TGG + Chr1:90662840-90662859 MsG0180005350.01.T01:CDS 45.0%
GACTGGATGCGAAATCATGA+CGG + Chr1:90657440-90657459 MsG0180005350.01.T01:intron 45.0%
GAGATGGATACAATTGGTGG+TGG - Chr1:90657110-90657129 None:intergenic 45.0%
GCAGATCAGTAAGAAGGAGA+GGG + Chr1:90657673-90657692 MsG0180005350.01.T01:intron 45.0%
GCAGTCATTAACTGGGTCAA+GGG + Chr1:90657762-90657781 MsG0180005350.01.T01:intron 45.0%
GCAGTCATTAACTGGGTCAA+GGG - Chr1:90657781-90657762 None:intergenic 45.0%
GGGAATGAGAAGATGAAGAC+AGG + Chr1:90657693-90657712 MsG0180005350.01.T01:intron 45.0%
GGGTACCTTCATTGAATGCT+GGG + Chr1:90658673-90658692 MsG0180005350.01.T01:intron 45.0%
GGTACCTTCATTGAATGCTG+GGG + Chr1:90658674-90658693 MsG0180005350.01.T01:intron 45.0%
GTGATTCGTCCCTGCAAATA+GGG + Chr1:90656818-90656837 MsG0180005350.01.T01:intron 45.0%
TACTCGTCCTGTACCGAAAT+GGG + Chr1:90662124-90662143 MsG0180005350.01.T01:intron 45.0%
TAGGCTAAATCATTTCCGCG+AGG + Chr1:90662453-90662472 MsG0180005350.01.T01:intron 45.0%
TAGGGAGAAGGAAGAAGAAG+AGG + Chr1:90657610-90657629 MsG0180005350.01.T01:intron 45.0%
TAGTCACCATCTGATTCAGC+CGG - Chr1:90661159-90661178 None:intergenic 45.0%
TCAAGTGTCCTTGCAAGCAA+CGG + Chr1:90653449-90653468 MsG0180005350.01.T01:five_prime_UTR 45.0%
TCACATGAATTGTGCTCCAG+AGG - Chr1:90663778-90663797 None:intergenic 45.0%
TCATGACAAGTTTCGGCACT+TGG + Chr1:90664683-90664702 MsG0180005350.01.T01:CDS 45.0%
TCATGTTCTACGAAGGACAG+TGG + Chr1:90655299-90655318 MsG0180005350.01.T01:intron 45.0%
TCTCATTGAAGATGTTGGGG+GGG + Chr1:90659036-90659055 MsG0180005350.01.T01:intron 45.0%
TGAAACCAAAGACACCGTGA+AGG - Chr1:90659515-90659534 None:intergenic 45.0%
TGACGTGGCAGTCATTAACT+GGG + Chr1:90657755-90657774 MsG0180005350.01.T01:intron 45.0%
TGATTCGTCCCTGCAAATAG+GGG + Chr1:90656819-90656838 MsG0180005350.01.T01:intron 45.0%
TGCAGAATTTCTCCCGCTTA+AGG + Chr1:90661460-90661479 MsG0180005350.01.T01:intron 45.0%
TGCAGATCAGTAAGAAGGAG+AGG + Chr1:90657672-90657691 MsG0180005350.01.T01:intron 45.0%
TGCCATATATGTGGCAGTCA+CGG - Chr1:90664587-90664606 None:intergenic 45.0%
TGGAAGAGAGGGAGAGAAAA+CGG - Chr1:90657255-90657274 None:intergenic 45.0%
TGGAGATGGAGGATCACTAA+AGG - Chr1:90662207-90662226 None:intergenic 45.0%
TGTGATTCGTCCCTGCAAAT+AGG + Chr1:90656817-90656836 MsG0180005350.01.T01:intron 45.0%
TTAAGCGACCCCTATTTGCA+AGG + Chr1:90657854-90657873 MsG0180005350.01.T01:intron 45.0%
TTAAGCGACCCCTATTTGCA+GGG - Chr1:90657873-90657854 None:intergenic 45.0%
TTAGAGTATGTGTGGGGACA+TGG + Chr1:90661623-90661642 MsG0180005350.01.T01:intron 45.0%
TTCCGGTCATGTTATTCACG+TGG - Chr1:90657315-90657334 None:intergenic 45.0%
TTCTGGCCCAAAACAGGTTT+AGG - Chr1:90658651-90658670 None:intergenic 45.0%
TTGACCCGTGATTATAGCCA+CGG + Chr1:90659782-90659801 MsG0180005350.01.T01:intron 45.0%
TTGGGTGTATTGTGCAGAGT+GGG + Chr1:90661092-90661111 MsG0180005350.01.T01:intron 45.0%
TTTAAGCGACCCCTATTTGC+AGG - Chr1:90657872-90657853 None:intergenic 45.0%
TTTGGGTGTATTGTGCAGAG+TGG + Chr1:90661091-90661110 MsG0180005350.01.T01:intron 45.0%
! AGAGGGAGAGAAAACGGATT+GGG - Chr1:90657249-90657268 None:intergenic 45.0%
! ATGCGAAATCATGACGGAAG+AGG + Chr1:90657446-90657465 MsG0180005350.01.T01:intron 45.0%
! GAGTACCTGTTGTTGCTTGT+TGG - Chr1:90660311-90660330 None:intergenic 45.0%
! GTAACCTTTACTTTCGGTGC+AGG + Chr1:90664798-90664817 MsG0180005350.01.T01:intron 45.0%
! TGACTTTTGCCTCCTTAAGC+GGG - Chr1:90661475-90661494 None:intergenic 45.0%
! TTGGGTTGTTGTTGTGGTTG+TGG - Chr1:90657231-90657250 None:intergenic 45.0%
!! AAACCTGTTTTGGGCCAGAA+TGG + Chr1:90658651-90658670 MsG0180005350.01.T01:intron 45.0%
!! AACCTGTTTTGGGCCAGAAT+GGG + Chr1:90658652-90658671 MsG0180005350.01.T01:intron 45.0%
!! AACGGATTGGGTTGTTGTTG+TGG - Chr1:90657237-90657256 None:intergenic 45.0%
!! ATGGATACAATTGGTGGTGG+TGG - Chr1:90657107-90657126 None:intergenic 45.0%
!! CAGAACAAGCCGGTTTTGTA+AGG - Chr1:90660390-90660409 None:intergenic 45.0%
!! GAGGGAAGAAGAGGTGTTAT+CGG + Chr1:90657402-90657421 MsG0180005350.01.T01:intron 45.0%
!! GGGACTTGATTTGTGCAAGT+TGG + Chr1:90660606-90660625 MsG0180005350.01.T01:intron 45.0%
!! GGTAGTGGGACTGAAGAATT+GGG + Chr1:90662612-90662631 MsG0180005350.01.T01:intron 45.0%
!! GGTTTTGTCTATCTCAGGGT+TGG + Chr1:90654904-90654923 MsG0180005350.01.T01:intron 45.0%
!! TCAATGAAGGTACCCCATTC+TGG - Chr1:90658668-90658687 None:intergenic 45.0%
!! TCCAGAGGAAGGTGTTAATG+CGG - Chr1:90663763-90663782 None:intergenic 45.0%
!! TGGTAGTGGGACTGAAGAAT+TGG + Chr1:90662611-90662630 MsG0180005350.01.T01:intron 45.0%
!! ACAAAAAAATTAATTATATA+TGG - Chr1:90654251-90654270 None:intergenic 5.0%
!! CAAAAAAATTAATTATATAT+GGG - Chr1:90654250-90654269 None:intergenic 5.0%
!!! TATTTTATTTATATTTTTCA+GGG + Chr1:90663100-90663119 MsG0180005350.01.T01:intron 5.0%
!!! TTATTTTATTTATATTTTTC+AGG + Chr1:90663099-90663118 MsG0180005350.01.T01:intron 5.0%
!!! TTTTAATATTTTAATGTAAT+AGG - Chr1:90655384-90655403 None:intergenic 5.0%
AACACCTCTTCTTCCCTCTC+CGG - Chr1:90657400-90657419 None:intergenic 50.0%
AACCGATGCATCTGGAAGAG+AGG - Chr1:90657267-90657286 None:intergenic 50.0%
ACCCGTGACTGCCACATATA+TGG + Chr1:90664582-90664601 MsG0180005350.01.T01:CDS 50.0%
ACCGATGCATCTGGAAGAGA+GGG - Chr1:90657266-90657285 None:intergenic 50.0%
ACCGCATTAACACCTTCCTC+TGG + Chr1:90663759-90663778 MsG0180005350.01.T01:intron 50.0%
AGCTTGCAATGTAGCCGATG+TGG - Chr1:90656763-90656782 None:intergenic 50.0%
AGTGCTCGCTGTAGCTTCTT+TGG - Chr1:90664628-90664647 None:intergenic 50.0%
ATGGCTCGCGATCGAAAGTT+TGG + Chr1:90657496-90657515 MsG0180005350.01.T01:intron 50.0%
CACAGCCAACAAGCAACAAC+AGG + Chr1:90660303-90660322 MsG0180005350.01.T01:CDS 50.0%
CATTGAATGCTGGGGACCAA+TGG + Chr1:90658682-90658701 MsG0180005350.01.T01:intron 50.0%
CCTGCTGATCTCTATGTCCT+GGG + Chr1:90661707-90661726 MsG0180005350.01.T01:CDS 50.0%
CTCATTGAAGATGTTGGGGG+GGG + Chr1:90659037-90659056 MsG0180005350.01.T01:intron 50.0%
CTTGCAATGTAGCCGATGTG+GGG - Chr1:90656761-90656780 None:intergenic 50.0%
GACTGCCACATATATGGCAG+AGG + Chr1:90664588-90664607 MsG0180005350.01.T01:CDS 50.0%
GAGAAAGCTCAACACACGAC+AGG - Chr1:90655808-90655827 None:intergenic 50.0%
GAGAGGGAGAGAAAACGGAT+TGG - Chr1:90657250-90657269 None:intergenic 50.0%
GCCATATATGTGGCAGTCAC+GGG - Chr1:90664586-90664605 None:intergenic 50.0%
GCTTGCAATGTAGCCGATGT+GGG - Chr1:90656762-90656781 None:intergenic 50.0%
GGACATAGAGATCAGCAGGA+TGG - Chr1:90661706-90661725 None:intergenic 50.0%
GGCAGTCATTAACTGGGTCA+AGG + Chr1:90657761-90657780 MsG0180005350.01.T01:intron 50.0%
GGCAGTCATTAACTGGGTCA+AGG - Chr1:90657780-90657761 None:intergenic 50.0%
GGGAGCCTCAACTTTATGAG+TGG + Chr1:90654992-90655011 MsG0180005350.01.T01:intron 50.0%
GTACATTGGAGAGGACCCAA+AGG + Chr1:90664224-90664243 MsG0180005350.01.T01:CDS 50.0%
GTGGGACTGAAGAATTGGGT+TGG + Chr1:90662616-90662635 MsG0180005350.01.T01:intron 50.0%
TAAGGCAATAAGTGGGTCCG+TGG - Chr1:90659802-90659821 None:intergenic 50.0%
TCACGTGGTTATTCCCTCTC+CGG - Chr1:90657343-90657362 None:intergenic 50.0%
TCATCACGGTATGGGTTCGA+AGG + Chr1:90662872-90662891 MsG0180005350.01.T01:CDS 50.0%
TCATTGAAGATGTTGGGGGG+GGG + Chr1:90659038-90659057 MsG0180005350.01.T01:intron 50.0%
TCCCTCTCTTCCAGATGCAT+CGG + Chr1:90657262-90657281 MsG0180005350.01.T01:intron 50.0%
TCCTGCTGATCTCTATGTCC+TGG + Chr1:90661706-90661725 MsG0180005350.01.T01:CDS 50.0%
TCGCGATCGAAAGTTTGGTC+TGG + Chr1:90657501-90657520 MsG0180005350.01.T01:intron 50.0%
TCTACGAAGGACAGTGGCTA+TGG + Chr1:90655305-90655324 MsG0180005350.01.T01:intron 50.0%
TCTTAGACCATCCCCCATGT+GGG - Chr1:90658057-90658076 None:intergenic 50.0%
TGGGTCCGTGGCTATAATCA+CGG - Chr1:90659790-90659809 None:intergenic 50.0%
TGGGTGTATTGTGCAGAGTG+GGG + Chr1:90661093-90661112 MsG0180005350.01.T01:intron 50.0%
TGGTCCCCAGCATTCAATGA+AGG - Chr1:90658681-90658700 None:intergenic 50.0%
TGGTTGTGTGCACCGTATGT+TGG - Chr1:90658955-90658974 None:intergenic 50.0%
TGTGTGGGGACATGGAATGT+TGG + Chr1:90661631-90661650 MsG0180005350.01.T01:CDS 50.0%
TGTTGCAACCGTTGCTTGCA+AGG - Chr1:90653460-90653479 None:intergenic 50.0%
TTCAGAAACCGGAAACTCGC+CGG + Chr1:90657378-90657397 MsG0180005350.01.T01:intron 50.0%
TTCATGGGAACCGATGCATC+TGG - Chr1:90657275-90657294 None:intergenic 50.0%
! AGGTGTTATCGGCGAAGAGA+CGG + Chr1:90657413-90657432 MsG0180005350.01.T01:intron 50.0%
! CTTCCTTTTCACCTGCCGTA+AGG - Chr1:90663183-90663202 None:intergenic 50.0%
! CTTTTCACCTGCCGTAAGGT+GGG - Chr1:90663179-90663198 None:intergenic 50.0%
! GGGGTACCTTCATTGAATGC+TGG + Chr1:90658672-90658691 MsG0180005350.01.T01:intron 50.0%
! TTTGGCCTTCACGGTGTCTT+TGG + Chr1:90659507-90659526 MsG0180005350.01.T01:intron 50.0%
!! ACCTGTTTTGGGCCAGAATG+GGG + Chr1:90658653-90658672 MsG0180005350.01.T01:intron 50.0%
!! ATGTTTGGTGTGGCCCACAT+GGG + Chr1:90658041-90658060 MsG0180005350.01.T01:intron 50.0%
!! ATTGGTGGTGGTGGAAGAGA+TGG - Chr1:90657098-90657117 None:intergenic 50.0%
!! CTGAAGAATTGGGTTGGAGC+TGG + Chr1:90662622-90662641 MsG0180005350.01.T01:intron 50.0%
!! TATGTTTGGTGTGGCCCACA+TGG + Chr1:90658040-90658059 MsG0180005350.01.T01:intron 50.0%
ACCCCATTCTGGCCCAAAAC+AGG - Chr1:90658657-90658676 None:intergenic 55.0%
ACGGTTGCAACAGCTGACGA+AGG + Chr1:90653468-90653487 MsG0180005350.01.T01:five_prime_UTR 55.0%
ATATGCACCCACCTTACGGC+AGG + Chr1:90663169-90663188 MsG0180005350.01.T01:CDS 55.0%
ATGTGGCAGTCACGGGTCTA+TGG - Chr1:90664579-90664598 None:intergenic 55.0%
ATTGAAGATGTTGGGGGGGG+GGG + Chr1:90659040-90659059 MsG0180005350.01.T01:intron 55.0%
ATTGTGCAGAGTGGGGAAGC+CGG + Chr1:90661100-90661119 MsG0180005350.01.T01:intron 55.0%
CACATGGGGGATGGTCTAAG+AGG + Chr1:90658056-90658075 MsG0180005350.01.T01:intron 55.0%
CAGGAGAGAGGATGAAGCTC+CGG + Chr1:90661137-90661156 MsG0180005350.01.T01:CDS 55.0%
CATTGAAGATGTTGGGGGGG+GGG + Chr1:90659039-90659058 MsG0180005350.01.T01:intron 55.0%
CCACCTTACGGCAGGTGAAA+AGG + Chr1:90663177-90663196 MsG0180005350.01.T01:CDS 55.0%
CCCAGGACATAGAGATCAGC+AGG - Chr1:90661710-90661729 None:intergenic 55.0%
CTCTTAGACCATCCCCCATG+TGG - Chr1:90658058-90658077 None:intergenic 55.0%
GAAGCTCCGGCTGAATCAGA+TGG + Chr1:90661150-90661169 MsG0180005350.01.T01:CDS 55.0%
GAGGATCAGAGCAGATACGG+CGG + Chr1:90657465-90657484 MsG0180005350.01.T01:intron 55.0%
GGGTCCGTGGCTATAATCAC+GGG - Chr1:90659789-90659808 None:intergenic 55.0%
GTGGGGACATGGAATGTTGG+AGG + Chr1:90661634-90661653 MsG0180005350.01.T01:CDS 55.0%
GTGTACGCCTCGCAACCTTT+GGG - Chr1:90664242-90664261 None:intergenic 55.0%
TAACATGACCGGAAGCTCGC+CGG + Chr1:90657321-90657340 MsG0180005350.01.T01:intron 55.0%
TATGGGTTCGAAGGAGCCTG+CGG + Chr1:90662881-90662900 MsG0180005350.01.T01:CDS 55.0%
TCCTGTCCCTAATCCGTGAC+CGG - Chr1:90661122-90661141 None:intergenic 55.0%
TGTTATCGGCGAAGAGACGG+TGG + Chr1:90657416-90657435 MsG0180005350.01.T01:intron 55.0%
! CCTTTTCACCTGCCGTAAGG+TGG - Chr1:90663180-90663199 None:intergenic 55.0%
!! ACGGATTAGGGACAGGAGAG+AGG + Chr1:90661125-90661144 MsG0180005350.01.T01:CDS 55.0%
!! TGTTTGGTGTGGCCCACATG+GGG + Chr1:90658042-90658061 MsG0180005350.01.T01:intron 55.0%
AAACCGGAAACTCGCCGGAG+AGG + Chr1:90657383-90657402 MsG0180005350.01.T01:intron 60.0%
AACCGGAAACTCGCCGGAGA+GGG + Chr1:90657384-90657403 MsG0180005350.01.T01:intron 60.0%
AGATACGGCGGCGGCATGTA+TGG + Chr1:90657477-90657496 MsG0180005350.01.T01:intron 60.0%
GAGAGGACCCAAAGGTTGCG+AGG + Chr1:90664232-90664251 MsG0180005350.01.T01:CDS 60.0%
GATCAGAGCAGATACGGCGG+CGG + Chr1:90657468-90657487 MsG0180005350.01.T01:intron 60.0%
GGTGTACGCCTCGCAACCTT+TGG - Chr1:90664243-90664262 None:intergenic 60.0%
TCTTCAACTAGGGGCGGACC+TGG + Chr1:90656447-90656466 MsG0180005350.01.T01:intron 60.0%
TTCCCTCTCCGGCGAGTTTC+CGG - Chr1:90657389-90657408 None:intergenic 60.0%
TTGAAGATGTTGGGGGGGGG+GGG + Chr1:90659041-90659060 MsG0180005350.01.T01:intron 60.0%
TTGCGAGGCGTACACCAGCA+TGG + Chr1:90664247-90664266 MsG0180005350.01.T01:CDS 60.0%
! GGGAAGCCGGTCACGGATTA+GGG + Chr1:90661113-90661132 MsG0180005350.01.T01:CDS 60.0%
!! GTTTGGTGTGGCCCACATGG+GGG + Chr1:90658043-90658062 MsG0180005350.01.T01:intron 60.0%
CAGAGTGGGGAAGCCGGTCA+CGG + Chr1:90661106-90661125 MsG0180005350.01.T01:intron 65.0%
CTCGCCGGAGAGGGAAGAAG+AGG + Chr1:90657393-90657412 MsG0180005350.01.T01:intron 65.0%
GGCGAAGAGACGGTGGTGAC+TGG + Chr1:90657423-90657442 MsG0180005350.01.T01:intron 65.0%
GGGGAAGCCGGTCACGGATT+AGG + Chr1:90661112-90661131 MsG0180005350.01.T01:CDS 65.0%
TGAAGATGTTGGGGGGGGGG+GGG + Chr1:90659042-90659061 MsG0180005350.01.T01:intron 65.0%
TTCCCTCTCCGGCGAGCTTC+CGG - Chr1:90657332-90657351 None:intergenic 65.0%
!! GCCGGTCACGGATTAGGGAC+AGG + Chr1:90661118-90661137 MsG0180005350.01.T01:CDS 65.0%
AAGATGTTGGGGGGGGGGGG+GGG + Chr1:90659044-90659063 MsG0180005350.01.T01:intron 70.0%
GAAGATGTTGGGGGGGGGGG+GGG + Chr1:90659043-90659062 MsG0180005350.01.T01:intron 70.0%
GACCGGAAGCTCGCCGGAGA+GGG + Chr1:90657327-90657346 MsG0180005350.01.T01:intron 70.0%
GGTGTGGCCCACATGGGGGA+TGG + Chr1:90658047-90658066 MsG0180005350.01.T01:intron 70.0%
TGACCGGAAGCTCGCCGGAG+AGG + Chr1:90657326-90657345 MsG0180005350.01.T01:intron 70.0%
AGATGTTGGGGGGGGGGGGG+GGG + Chr1:90659045-90659064 MsG0180005350.01.T01:intron 75.0%
! ATGTTGGGGGGGGGGGGGGG+GGG + Chr1:90659047-90659066 MsG0180005350.01.T01:intron 80.0%
! GATGTTGGGGGGGGGGGGGG+GGG + Chr1:90659046-90659065 MsG0180005350.01.T01:intron 80.0%
! TGTTGGGGGGGGGGGGGGGG+GGG + Chr1:90659048-90659067 MsG0180005350.01.T01:intron 85.0%
! GGGGGGGGGGGGGGGGGGTA+TGG + Chr1:90659061-90659080 MsG0180005350.01.T01:intron 90.0%
! GTTGGGGGGGGGGGGGGGGG+GGG + Chr1:90659049-90659068 MsG0180005350.01.T01:intron 90.0%
! TTGGGGGGGGGGGGGGGGGG+GGG + Chr1:90659050-90659069 MsG0180005350.01.T01:intron 90.0%
! TGGGGGGGGGGGGGGGGGGG+GGG + Chr1:90659051-90659070 MsG0180005350.01.T01:intron 95.0%
Chromosome Type Strat End Strand Name
Chr1 gene 90653363 90665170 90653363 ID=MsG0180005350.01;Name=MsG0180005350.01
Chr1 mRNA 90653363 90665170 90653363 ID=MsG0180005350.01.T01;Parent=MsG0180005350.01;Name=MsG0180005350.01.T01;_AED=0.44;_eAED=0.44;_QI=146|0.7|0.81|1|0.6|0.45|11|360|380
Chr1 exon 90653363 90653502 90653363 ID=MsG0180005350.01.T01:exon:17489;Parent=MsG0180005350.01.T01
Chr1 exon 90660274 90660324 90660274 ID=MsG0180005350.01.T01:exon:17490;Parent=MsG0180005350.01.T01
Chr1 exon 90660417 90660464 90660417 ID=MsG0180005350.01.T01:exon:17491;Parent=MsG0180005350.01.T01
Chr1 exon 90660713 90660845 90660713 ID=MsG0180005350.01.T01:exon:17492;Parent=MsG0180005350.01.T01
Chr1 exon 90661109 90661171 90661109 ID=MsG0180005350.01.T01:exon:17493;Parent=MsG0180005350.01.T01
Chr1 exon 90661627 90661728 90661627 ID=MsG0180005350.01.T01:exon:17494;Parent=MsG0180005350.01.T01
Chr1 exon 90662743 90662969 90662743 ID=MsG0180005350.01.T01:exon:17495;Parent=MsG0180005350.01.T01
Chr1 exon 90663121 90663305 90663121 ID=MsG0180005350.01.T01:exon:17496;Parent=MsG0180005350.01.T01
Chr1 exon 90664149 90664268 90664149 ID=MsG0180005350.01.T01:exon:17497;Parent=MsG0180005350.01.T01
Chr1 exon 90664501 90664729 90664501 ID=MsG0180005350.01.T01:exon:17498;Parent=MsG0180005350.01.T01
Chr1 exon 90664820 90665170 90664820 ID=MsG0180005350.01.T01:exon:17499;Parent=MsG0180005350.01.T01
Chr1 five_prime_UTR 90653363 90653502 90653363 ID=MsG0180005350.01.T01:five_prime_utr;Parent=MsG0180005350.01.T01
Chr1 five_prime_UTR 90660274 90660279 90660274 ID=MsG0180005350.01.T01:five_prime_utr;Parent=MsG0180005350.01.T01
Chr1 CDS 90660280 90660324 90660280 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90660417 90660464 90660417 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90660713 90660845 90660713 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90661109 90661171 90661109 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90661627 90661728 90661627 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90662743 90662969 90662743 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90663121 90663305 90663121 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90664149 90664268 90664149 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 CDS 90664501 90664720 90664501 ID=MsG0180005350.01.T01:cds;Parent=MsG0180005350.01.T01
Chr1 three_prime_UTR 90664721 90664729 90664721 ID=MsG0180005350.01.T01:three_prime_utr;Parent=MsG0180005350.01.T01
Chr1 three_prime_UTR 90664820 90665170 90664820 ID=MsG0180005350.01.T01:three_prime_utr;Parent=MsG0180005350.01.T01
Gene Sequence

>MsG0180005350.01.T01

ATGAAGCAGCAGCAGCAGAAGCACACAGCCAACAAGCAACAACAGACAGTGATGAAGCAGCAGCAGAAGCACACAGCCAACAAGCAACAACAGAATTTATGGGCAACAATGGTCATGCGCAAATGGCTTAACATTAAAAGGAAGGAGTCTGATGATTACAGCACCGACCCTGATGATGATGATGATGATGATGAGGATGATCCTGAAACTGATTCAGACAATGAAGAGTGGGGAAGCCGGTCACGGATTAGGGACAGGAGAGAGGATGAAGCTCCGGCTGAATCAGATGAGTATGTGTGGGGACATGGAATGTTGGAGGAAAAACTTCACCTAATGACTTTGATATGGATTGGGCTAGACATTAACCATCCTGCTGATCTCTATGTCCTGGCCTGTGATTCTTTCAAATCAAAAACAGATGCTATAGATTTACTGGCTGATATTGATCTTGAAGCTTTGATGAAGAGGAAAACAAGATCGTCGTATGTGAAGATAGTGAGCAAGCAGATGGTTGGTATTTTCATCACGGTATGGGTTCGAAGGAGCCTGCGGAAACATATTCAGAACATGAAGGTTTCAACTGTTGGTGTTGGTGTTATGGGCTATATTGGTAACAAGGGATCAATATCTGTCAGCATGTCTATTTATCAGACGCTTTTTTGCTTTATATGCACCCACCTTACGGCAGGTGAAAAGGAAGCCGATGAAATCAAACGAAATGCTGATGTTCGTGAAATACATCAGAGGACCCATTTTTATTCACTTTCTGATTTTGGACTTCCCAAAAGTATCTTGGATCATGAAAAGGTTTTTGATGGATGGTCAGAAGGTGCGTTAAACTTCCCACCAACCTATAAGTACGAGATTAATTCAGACAAGTACATTGGAGAGGACCCAAAGGTTGCGAGGCGTACACCAGCATGGTGCGATCGTATTCTATCACATGGAAATGGAATGAGATTACTGAGTTACAAAAGGAGTGAACTTAAATTTTCAGACCATAGACCCGTGACTGCCACATATATGGCAGAGGTTGAGGTGTTCAATCCAAAGAAGCTACAGCGAGCACTTAATTACACCGATGCAGAGATCGAAAATGAAGAAGTCATGACAAGTTTCGGCACTTGGAATTTAGCAACATAA

Protein sequence

>MsG0180005350.01.T01

MKQQQQKHTANKQQQTVMKQQQKHTANKQQQNLWATMVMRKWLNIKRKESDDYSTDPDDDDDDDEDDPETDSDNEEWGSRSRIRDRREDEAPAESDEYVWGHGMLEEKLHLMTLIWIGLDINHPADLYVLACDSFKSKTDAIDLLADIDLEALMKRKTRSSYVKIVSKQMVGIFITVWVRRSLRKHIQNMKVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICTHLTAGEKEADEIKRNADVREIHQRTHFYSLSDFGLPKSILDHEKVFDGWSEGALNFPPTYKYEINSDKYIGEDPKVARRTPAWCDRILSHGNGMRLLSYKRSELKFSDHRPVTATYMAEVEVFNPKKLQRALNYTDAEIENEEVMTSFGTWNLAT*