Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005393.01.T01 | XP_003592099.1 | 55.392 | 204 | 44 | 3 | 1 | 157 | 1 | 204 | 5.45E-54 | 180 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005393.01.T01 | G7IBZ6 | 55.392 | 204 | 44 | 3 | 1 | 157 | 1 | 204 | 2.60e-54 | 180 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080047869.01 | MsG0180005393.01 | 0.808852 | 2.526763e-50 | 1.460431e-47 |
MsG0080048113.01 | MsG0180005393.01 | 0.808154 | 3.560290e-50 | 2.020615e-47 |
MsG0080048856.01 | MsG0180005393.01 | 0.825343 | 4.937587e-54 | 4.488333e-51 |
MsG0180000065.01 | MsG0180005393.01 | 0.808330 | 3.265133e-50 | 1.861763e-47 |
MsG0180000145.01 | MsG0180005393.01 | 0.815693 | 8.112992e-52 | 5.632823e-49 |
MsG0180000470.01 | MsG0180005393.01 | 0.807967 | 3.902613e-50 | 2.203823e-47 |
MsG0180001892.01 | MsG0180005393.01 | 0.806626 | 7.509080e-50 | 4.095108e-47 |
MsG0180003669.01 | MsG0180005393.01 | 0.828143 | 1.059008e-54 | 1.043624e-51 |
MsG0180003797.01 | MsG0180005393.01 | 0.813185 | 2.908857e-51 | 1.886456e-48 |
MsG0180004099.01 | MsG0180005393.01 | 0.835787 | 1.369116e-56 | 1.691843e-53 |
MsG0180004389.01 | MsG0180005393.01 | 0.844028 | 9.741988e-59 | 1.552827e-55 |
MsG0180004711.01 | MsG0180005393.01 | 0.805605 | 1.231561e-49 | 6.543470e-47 |
MsG0180004754.01 | MsG0180005393.01 | 0.820757 | 5.794241e-53 | 4.625451e-50 |
MsG0180004970.01 | MsG0180005393.01 | 0.819564 | 1.086804e-52 | 8.392961e-50 |
MsG0180005250.01 | MsG0180005393.01 | 0.825138 | 5.518730e-54 | 4.987883e-51 |
MsG0180005393.01 | MsG0280006299.01 | 0.815488 | 9.011966e-52 | 6.222180e-49 |
MsG0180005393.01 | MsG0280006567.01 | 0.811048 | 8.506018e-51 | 5.211600e-48 |
MsG0180005393.01 | MsG0280007392.01 | 0.826661 | 2.399808e-54 | 2.264992e-51 |
MsG0180005393.01 | MsG0280007529.01 | 0.819253 | 1.280011e-52 | 9.799396e-50 |
MsG0180005393.01 | MsG0280007955.01 | 0.829115 | 6.167328e-55 | 6.252367e-52 |
MsG0180005393.01 | MsG0280008377.01 | 0.817944 | 2.534825e-52 | 1.871750e-49 |
MsG0180005393.01 | MsG0280008615.01 | 0.814450 | 1.531409e-51 | 1.027897e-48 |
MsG0180005393.01 | MsG0280009514.01 | 0.828596 | 8.232850e-55 | 8.220751e-52 |
MsG0180005393.01 | MsG0280009748.01 | 0.826463 | 2.675431e-54 | 2.510846e-51 |
MsG0180005393.01 | MsG0280009794.01 | 0.804392 | 2.207906e-49 | 1.137039e-46 |
MsG0180005393.01 | MsG0280010443.01 | 0.804278 | 2.332192e-49 | 1.197546e-46 |
MsG0180005393.01 | MsG0280010491.01 | 0.819274 | 1.265661e-52 | 9.694913e-50 |
MsG0180005393.01 | MsG0280010698.01 | 0.836097 | 1.142555e-56 | 1.425230e-53 |
MsG0180005393.01 | MsG0280010779.01 | 0.802316 | 5.943493e-49 | 2.902617e-46 |
MsG0180005393.01 | MsG0280011003.01 | 0.811607 | 6.433669e-51 | 4.000118e-48 |
MsG0180005393.01 | MsG0280011013.01 | 0.809668 | 1.688399e-50 | 9.974401e-48 |
MsG0180005393.01 | MsG0280011014.01 | 0.818172 | 2.252227e-52 | 1.673508e-49 |
MsG0180005393.01 | MsG0280011101.01 | 0.808133 | 3.596713e-50 | 2.040096e-47 |
MsG0180005393.01 | MsG0280011124.01 | 0.826342 | 2.859267e-54 | 2.674221e-51 |
MsG0180005393.01 | MsG0280011258.01 | 0.816415 | 5.597248e-52 | 3.963497e-49 |
MsG0180005393.01 | MsG0280011282.01 | 0.816074 | 6.671289e-52 | 4.680481e-49 |
MsG0180005393.01 | MsG0380011609.01 | 0.816513 | 5.321068e-52 | 3.778032e-49 |
MsG0180005393.01 | MsG0380011648.01 | 0.820026 | 8.525449e-53 | 6.669661e-50 |
MsG0180005393.01 | MsG0380012460.01 | 0.818202 | 2.217273e-52 | 1.648918e-49 |
MsG0180005393.01 | MsG0380012471.01 | 0.812038 | 5.183524e-51 | 3.260092e-48 |
MsG0180005393.01 | MsG0380013363.01 | 0.806880 | 6.633903e-50 | 3.641855e-47 |
MsG0180005393.01 | MsG0380013834.01 | 0.809557 | 1.783666e-50 | 1.050576e-47 |
MsG0180005393.01 | MsG0380014537.01 | 0.832284 | 1.031964e-55 | 1.148050e-52 |
MsG0180005393.01 | MsG0380015168.01 | 0.806826 | 6.810297e-50 | 3.733470e-47 |
MsG0180005393.01 | MsG0380015196.01 | 0.802077 | 6.658488e-49 | 3.231758e-46 |
MsG0180005393.01 | MsG0380015332.01 | 0.811555 | 6.604027e-51 | 4.100562e-48 |
MsG0180005393.01 | MsG0380015555.01 | 0.821392 | 4.137679e-53 | 3.361944e-50 |
MsG0180005393.01 | MsG0380015631.01 | 0.823338 | 1.461511e-53 | 1.254794e-50 |
MsG0180005393.01 | MsG0380015677.01 | 0.829095 | 6.235478e-55 | 6.317812e-52 |
MsG0180005393.01 | MsG0380015944.01 | 0.805592 | 1.239483e-49 | 6.583437e-47 |
MsG0180005393.01 | MsG0380016517.01 | 0.802260 | 6.102908e-49 | 2.976015e-46 |
MsG0180005393.01 | MsG0380016553.01 | 0.807903 | 4.025710e-50 | 2.269440e-47 |
MsG0180005393.01 | MsG0380016765.01 | 0.807332 | 5.322926e-50 | 2.956685e-47 |
MsG0180005393.01 | MsG0380016970.01 | 0.823394 | 1.418031e-53 | 1.219323e-50 |
MsG0180005393.01 | MsG0380017049.01 | 0.801199 | 1.007692e-48 | 4.783480e-46 |
MsG0180005393.01 | MsG0480018163.01 | 0.837363 | 5.432692e-57 | 7.040262e-54 |
MsG0180005393.01 | MsG0480018313.01 | 0.813314 | 2.725036e-51 | 1.773575e-48 |
MsG0180005393.01 | MsG0480018465.01 | 0.810732 | 9.956528e-51 | 6.049156e-48 |
MsG0180005393.01 | MsG0480020002.01 | 0.807844 | 4.145462e-50 | 2.333427e-47 |
MsG0180005393.01 | MsG0480021465.01 | 0.800719 | 1.263214e-48 | 5.923748e-46 |
MsG0180005393.01 | MsG0480022164.01 | 0.813239 | 2.831224e-51 | 1.838751e-48 |
MsG0180005393.01 | MsG0480023463.01 | 0.813370 | 2.648607e-51 | 1.726548e-48 |
MsG0180005393.01 | MsG0480023600.01 | 0.816183 | 6.304483e-52 | 4.436321e-49 |
MsG0180005393.01 | MsG0480023707.01 | 0.823782 | 1.150703e-53 | 1.000595e-50 |
MsG0180005393.01 | MsG0480023832.01 | 0.809764 | 1.610607e-50 | 9.539072e-48 |
MsG0180005393.01 | MsG0480023873.01 | 0.820857 | 5.496342e-53 | 4.400094e-50 |
MsG0180005393.01 | MsG0580024489.01 | 0.803416 | 3.523117e-49 | 1.769437e-46 |
MsG0180005393.01 | MsG0580026309.01 | 0.823791 | 1.145021e-53 | 9.958812e-51 |
MsG0180005393.01 | MsG0580027091.01 | 0.802860 | 4.592069e-49 | 2.273703e-46 |
MsG0180005393.01 | MsG0580027431.01 | 0.800862 | 1.181137e-48 | 5.559288e-46 |
MsG0180005393.01 | MsG0580027650.01 | 0.806425 | 8.278414e-50 | 4.491768e-47 |
MsG0180005393.01 | MsG0580028176.01 | 0.816373 | 5.716905e-52 | 4.043771e-49 |
MsG0180005393.01 | MsG0580029640.01 | 0.841772 | 3.878910e-58 | 5.759040e-55 |
MsG0180005393.01 | MsG0680030881.01 | 0.815857 | 7.456304e-52 | 5.199860e-49 |
MsG0180005393.01 | MsG0680030949.01 | 0.801216 | 9.996800e-49 | 4.747471e-46 |
MsG0180005393.01 | MsG0680031506.01 | 0.807689 | 4.470008e-50 | 2.506005e-47 |
MsG0180005393.01 | MsG0680031617.01 | 0.812693 | 3.728537e-51 | 2.386694e-48 |
MsG0180005393.01 | MsG0680033412.01 | 0.815433 | 9.267276e-52 | 6.388554e-49 |
MsG0180005393.01 | MsG0680034187.01 | 0.800240 | 1.581416e-48 | 7.326452e-46 |
MsG0180005393.01 | MsG0680034842.01 | 0.807564 | 4.752387e-50 | 2.655600e-47 |
MsG0180005393.01 | MsG0680034890.01 | 0.813892 | 2.033155e-51 | 1.344211e-48 |
MsG0180005393.01 | MsG0680035475.01 | 0.815766 | 7.814273e-52 | 5.436584e-49 |
MsG0180005393.01 | MsG0680035573.01 | 0.822866 | 1.883371e-53 | 1.595722e-50 |
MsG0180005393.01 | MsG0680035692.01 | 0.847450 | 1.147771e-59 | 2.040919e-56 |
MsG0180005393.01 | MsG0780036477.01 | 0.811174 | 7.989615e-51 | 4.911217e-48 |
MsG0180005393.01 | MsG0780036663.01 | 0.815189 | 1.050234e-51 | 7.191144e-49 |
MsG0180005393.01 | MsG0780036815.01 | 0.816038 | 6.792860e-52 | 4.761180e-49 |
MsG0180005393.01 | MsG0780037054.01 | 0.820572 | 6.389937e-53 | 5.074688e-50 |
MsG0180005393.01 | MsG0780038401.01 | 0.818276 | 2.132943e-52 | 1.589387e-49 |
MsG0180005393.01 | MsG0780038424.01 | 0.817682 | 2.904907e-52 | 2.129717e-49 |
MsG0180005393.01 | MsG0780038691.01 | 0.807769 | 4.298543e-50 | 2.414934e-47 |
MsG0180005393.01 | MsG0780039059.01 | 0.811724 | 6.066619e-51 | 3.783796e-48 |
MsG0180005393.01 | MsG0780039137.01 | 0.807148 | 5.822194e-50 | 3.218483e-47 |
MsG0180005393.01 | MsG0780039170.01 | 0.807418 | 5.104337e-50 | 2.841600e-47 |
MsG0180005393.01 | MsG0780039243.01 | 0.834456 | 2.966151e-56 | 3.522141e-53 |
MsG0180005393.01 | MsG0780039866.01 | 0.812318 | 4.502564e-51 | 2.853668e-48 |
MsG0180005393.01 | MsG0780040044.01 | 0.801971 | 7.000656e-49 | 3.388505e-46 |
MsG0180005393.01 | MsG0780040057.01 | 0.809128 | 2.205137e-50 | 1.284071e-47 |
MsG0180005393.01 | MsG0780040669.01 | 0.815749 | 7.882635e-52 | 5.481547e-49 |
MsG0180005393.01 | MsG0780040704.01 | 0.811388 | 7.179686e-51 | 4.438263e-48 |
MsG0180005393.01 | MsG0780040841.01 | 0.816014 | 6.879640e-52 | 4.818726e-49 |
MsG0180005393.01 | MsG0780041667.01 | 0.806191 | 9.273598e-50 | 5.001985e-47 |
MsG0180005393.01 | MsG0880041860.01 | 0.806007 | 1.013687e-49 | 5.442155e-47 |
MsG0180005393.01 | MsG0880041896.01 | 0.808966 | 2.388997e-50 | 1.385005e-47 |
MsG0180005393.01 | MsG0880041986.01 | 0.810648 | 1.038482e-50 | 6.295030e-48 |
MsG0180005393.01 | MsG0880042311.01 | 0.828140 | 1.060713e-54 | 1.045228e-51 |
MsG0180005393.01 | MsG0880042518.01 | 0.807879 | 4.074539e-50 | 2.295556e-47 |
MsG0180005393.01 | MsG0880042543.01 | 0.815018 | 1.146183e-51 | 7.812083e-49 |
MsG0180005393.01 | MsG0880042698.01 | 0.827556 | 1.465573e-54 | 1.419649e-51 |
MsG0180005393.01 | MsG0880043480.01 | 0.806967 | 6.360563e-50 | 3.499558e-47 |
MsG0180005393.01 | MsG0880044574.01 | 0.804780 | 1.832810e-49 | 9.534176e-47 |
MsG0180005393.01 | MsG0880045111.01 | 0.803142 | 4.015180e-49 | 2.002378e-46 |
MsG0180005393.01 | MsG0880045372.01 | 0.817168 | 3.793261e-52 | 2.742076e-49 |
MsG0180005393.01 | MsG0880045736.01 | 0.808105 | 3.647721e-50 | 2.067439e-47 |
MsG0180005393.01 | MsG0880045937.01 | 0.803380 | 3.583023e-49 | 1.797833e-46 |
MsG0180005393.01 | MsG0880046012.01 | 0.843693 | 1.198049e-58 | 1.889555e-55 |
MsG0180005393.01 | MsG0880046020.01 | 0.813762 | 2.172061e-51 | 1.430938e-48 |
MsG0180005393.01 | MsG0880046479.01 | 0.810662 | 1.031217e-50 | 6.253409e-48 |
MsG0180005393.01 | MsG0880047473.01 | 0.800169 | 1.634981e-48 | 7.560936e-46 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005393.01.T01 | MTR_1g098690 | 55.392 | 204 | 44 | 3 | 1 | 157 | 1 | 204 | 6.60e-58 | 180 |
MsG0180005393.01.T01 | MTR_1246s0010 | 63.492 | 63 | 22 | 1 | 1 | 63 | 1 | 62 | 1.06e-20 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0180005393.01.T01 | AT1G76780 | 56.944 | 72 | 28 | 1 | 1 | 69 | 1 | 72 | 1.62e-19 | 84.7 |
MsG0180005393.01.T01 | AT1G76780 | 56.944 | 72 | 28 | 1 | 1 | 69 | 1 | 72 | 1.62e-19 | 84.7 |
MsG0180005393.01.T01 | AT1G76770 | 60.317 | 63 | 25 | 0 | 1 | 63 | 1 | 63 | 6.57e-18 | 77.8 |
Find 31 sgRNAs with CRISPR-Local
Find 50 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGTCCACCTTTGGTTCT+TGG | 0.114619 | 1:+91241091 | MsG0180005393.01.T01:CDS |
CTAGGACGTCTCTTCTTAAC+AGG | 0.275114 | 1:-91241056 | None:intergenic |
GACAGGTCCTGCTCTGTCTT+TGG | 0.343396 | 1:-91240264 | None:intergenic |
ACAAGGTTGCCATGGTTTCT+AGG | 0.350684 | 1:-91241074 | None:intergenic |
ATTGCTATGGAGGTTGAGTT+AGG | 0.385137 | 1:+91240185 | None:intergenic |
ATGGCAACCTTGTCCACCTT+TGG | 0.390972 | 1:+91241084 | MsG0180005393.01.T01:CDS |
TGTCCACCTTTGGTTCTTGG+AGG | 0.424444 | 1:+91241094 | MsG0180005393.01.T01:CDS |
GGCAAACTGAAAATCAGAAA+TGG | 0.432210 | 1:-91240243 | None:intergenic |
CAGTTTGCCAAAGACAGAGC+AGG | 0.497784 | 1:+91240257 | MsG0180005393.01.T01:CDS |
AGAAGAAGTGAAGGAAGAAG+AGG | 0.509148 | 1:+91240947 | MsG0180005393.01.T01:CDS |
GTTTCTTTAGATAAGAAGAC+AGG | 0.514312 | 1:-91240281 | None:intergenic |
TAGCAAAAGGAGTGCTGAGT+GGG | 0.529464 | 1:+91240917 | MsG0180005393.01.T01:CDS |
GACATCAACATTAACAAAGA+TGG | 0.531815 | 1:+91240710 | MsG0180005393.01.T01:CDS |
CTGAAAATCAGAAATGGAAG+TGG | 0.544169 | 1:-91240237 | None:intergenic |
GGGTGGAATAGAAGAAGTGA+AGG | 0.548588 | 1:+91240938 | MsG0180005393.01.T01:CDS |
AAGTGCAAGAAAAGAAGTAA+AGG | 0.549837 | 1:+91241001 | MsG0180005393.01.T01:CDS |
GAAGAAGTGAAGGAAGAAGA+GGG | 0.550743 | 1:+91240948 | MsG0180005393.01.T01:CDS |
CCAAGAACCAAAGGTGGACA+AGG | 0.550847 | 1:-91241091 | None:intergenic |
TACAGATGATAAGAGTGAAG+AGG | 0.565214 | 1:+91241025 | MsG0180005393.01.T01:CDS |
CAAAGCTAAGTATTACGAAG+AGG | 0.566739 | 1:+91240858 | MsG0180005393.01.T01:intron |
ACCTTTGAGATGTGCTGTGA+GGG | 0.582015 | 1:-91240318 | None:intergenic |
GCTAAGTATTACGAAGAGGA+AGG | 0.582114 | 1:+91240862 | MsG0180005393.01.T01:intron |
ACCCTCACAGCACATCTCAA+AGG | 0.582279 | 1:+91240317 | MsG0180005393.01.T01:CDS |
AAAGGTGGACAAGGTTGCCA+TGG | 0.584568 | 1:-91241082 | None:intergenic |
GTTGATCCTCCAAGAACCAA+AGG | 0.621557 | 1:-91241100 | None:intergenic |
AAGAGACGTCCTAGAAACCA+TGG | 0.643683 | 1:+91241065 | MsG0180005393.01.T01:CDS |
AAAAGGAGTGCTGAGTGGGG+TGG | 0.656997 | 1:+91240921 | MsG0180005393.01.T01:CDS |
GATCCTCCAAGAACCAAAGG+TGG | 0.669806 | 1:-91241097 | None:intergenic |
AGCAAAAGGAGTGCTGAGTG+GGG | 0.706883 | 1:+91240918 | MsG0180005393.01.T01:CDS |
AACCTTTGAGATGTGCTGTG+AGG | 0.714535 | 1:-91240319 | None:intergenic |
ATAGCAAAAGGAGTGCTGAG+TGG | 0.729591 | 1:+91240916 | MsG0180005393.01.T01:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATTTAATTTGTTTTCAC+AGG | - | Chr1:91240522-91240541 | None:intergenic | 15.0% |
! | ATATGTTCATCATATCAACA+TGG | - | Chr1:91240666-91240685 | None:intergenic | 25.0% |
!! | AAGAAGTTTAAAATCCCTAA+TGG | + | Chr1:91240818-91240837 | MsG0180005393.01.T01:intron | 25.0% |
AAGTGCAAGAAAAGAAGTAA+AGG | + | Chr1:91241001-91241020 | MsG0180005393.01.T01:CDS | 30.0% | |
CAACATGGTATCATTAACAT+AGG | - | Chr1:91240651-91240670 | None:intergenic | 30.0% | |
CGTCTTATGATATGTCTATA+AGG | + | Chr1:91240461-91240480 | MsG0180005393.01.T01:intron | 30.0% | |
GACATCAACATTAACAAAGA+TGG | + | Chr1:91240710-91240729 | MsG0180005393.01.T01:CDS | 30.0% | |
GTTTCTTTAGATAAGAAGAC+AGG | - | Chr1:91240284-91240303 | None:intergenic | 30.0% | |
TCAAGAAAGAGCTGAAAAAA+AGG | + | Chr1:91240788-91240807 | MsG0180005393.01.T01:intron | 30.0% | |
TTATCCAAACAACTCCATTA+GGG | - | Chr1:91240835-91240854 | None:intergenic | 30.0% | |
TTGATATGATGAACATATGC+AGG | + | Chr1:91240668-91240687 | MsG0180005393.01.T01:intron | 30.0% | |
!! | TTTTTCAGCTCTTTCTTGAA+TGG | - | Chr1:91240787-91240806 | None:intergenic | 30.0% |
AAATCCCTAATGGAGTTGTT+TGG | + | Chr1:91240828-91240847 | MsG0180005393.01.T01:intron | 35.0% | |
CAAAGCTAAGTATTACGAAG+AGG | + | Chr1:91240858-91240877 | MsG0180005393.01.T01:intron | 35.0% | |
CCAAAAACGGAAATAGCAAA+AGG | + | Chr1:91240904-91240923 | MsG0180005393.01.T01:CDS | 35.0% | |
CTGAAAATCAGAAATGGAAG+TGG | - | Chr1:91240240-91240259 | None:intergenic | 35.0% | |
CTTATCCAAACAACTCCATT+AGG | - | Chr1:91240836-91240855 | None:intergenic | 35.0% | |
GAGAATAGTGATGCCAAAAA+CGG | + | Chr1:91240891-91240910 | MsG0180005393.01.T01:CDS | 35.0% | |
GGCAAACTGAAAATCAGAAA+TGG | - | Chr1:91240246-91240265 | None:intergenic | 35.0% | |
TACAGATGATAAGAGTGAAG+AGG | + | Chr1:91241025-91241044 | MsG0180005393.01.T01:CDS | 35.0% | |
TGGTACAAAATTTCAGTGAG+TGG | + | Chr1:91240730-91240749 | MsG0180005393.01.T01:intron | 35.0% | |
! | TCTTTTCTTGCACTTTGTTC+TGG | - | Chr1:91240996-91241015 | None:intergenic | 35.0% |
! | TTTTCACAGGCTATCATGAA+GGG | - | Chr1:91240509-91240528 | None:intergenic | 35.0% |
!!! | CCTTTTGCTATTTCCGTTTT+TGG | - | Chr1:91240907-91240926 | None:intergenic | 35.0% |
AGAAGAAGTGAAGGAAGAAG+AGG | + | Chr1:91240947-91240966 | MsG0180005393.01.T01:CDS | 40.0% | |
GAAGAAGTGAAGGAAGAAGA+GGG | + | Chr1:91240948-91240967 | MsG0180005393.01.T01:CDS | 40.0% | |
GCTAAGTATTACGAAGAGGA+AGG | + | Chr1:91240862-91240881 | MsG0180005393.01.T01:intron | 40.0% | |
! | GTTTTCACAGGCTATCATGA+AGG | - | Chr1:91240510-91240529 | None:intergenic | 40.0% |
AAGAGACGTCCTAGAAACCA+TGG | + | Chr1:91241065-91241084 | MsG0180005393.01.T01:CDS | 45.0% | |
ACAAGGTTGCCATGGTTTCT+AGG | - | Chr1:91241077-91241096 | None:intergenic | 45.0% | |
CCACTTGTAAGACTGTTCGA+CGG | + | Chr1:91240426-91240445 | MsG0180005393.01.T01:intron | 45.0% | |
CTAGGACGTCTCTTCTTAAC+AGG | - | Chr1:91241059-91241078 | None:intergenic | 45.0% | |
GGGTGGAATAGAAGAAGTGA+AGG | + | Chr1:91240938-91240957 | MsG0180005393.01.T01:CDS | 45.0% | |
GTTGATCCTCCAAGAACCAA+AGG | - | Chr1:91241103-91241122 | None:intergenic | 45.0% | |
!! | AACCTTTGAGATGTGCTGTG+AGG | - | Chr1:91240322-91240341 | None:intergenic | 45.0% |
!! | ACCTTTGAGATGTGCTGTGA+GGG | - | Chr1:91240321-91240340 | None:intergenic | 45.0% |
!! | ATAGCAAAAGGAGTGCTGAG+TGG | + | Chr1:91240916-91240935 | MsG0180005393.01.T01:CDS | 45.0% |
!! | TAGCAAAAGGAGTGCTGAGT+GGG | + | Chr1:91240917-91240936 | MsG0180005393.01.T01:CDS | 45.0% |
AAAGGTGGACAAGGTTGCCA+TGG | - | Chr1:91241085-91241104 | None:intergenic | 50.0% | |
ACCCTCACAGCACATCTCAA+AGG | + | Chr1:91240317-91240336 | MsG0180005393.01.T01:CDS | 50.0% | |
ATGGCAACCTTGTCCACCTT+TGG | + | Chr1:91241084-91241103 | MsG0180005393.01.T01:CDS | 50.0% | |
CAGTTTGCCAAAGACAGAGC+AGG | + | Chr1:91240257-91240276 | MsG0180005393.01.T01:CDS | 50.0% | |
CCAAGAACCAAAGGTGGACA+AGG | - | Chr1:91241094-91241113 | None:intergenic | 50.0% | |
CCGTCGAACAGTCTTACAAG+TGG | - | Chr1:91240429-91240448 | None:intergenic | 50.0% | |
GATCCTCCAAGAACCAAAGG+TGG | - | Chr1:91241100-91241119 | None:intergenic | 50.0% | |
!! | AGCAAAAGGAGTGCTGAGTG+GGG | + | Chr1:91240918-91240937 | MsG0180005393.01.T01:CDS | 50.0% |
!! | CCTTGTCCACCTTTGGTTCT+TGG | + | Chr1:91241091-91241110 | MsG0180005393.01.T01:CDS | 50.0% |
!! | TGTCCACCTTTGGTTCTTGG+AGG | + | Chr1:91241094-91241113 | MsG0180005393.01.T01:CDS | 50.0% |
GACAGGTCCTGCTCTGTCTT+TGG | - | Chr1:91240267-91240286 | None:intergenic | 55.0% | |
!! | AAAAGGAGTGCTGAGTGGGG+TGG | + | Chr1:91240921-91240940 | MsG0180005393.01.T01:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr1 | gene | 91240191 | 91241151 | 91240191 | ID=MsG0180005393.01;Name=MsG0180005393.01 |
Chr1 | mRNA | 91240191 | 91241151 | 91240191 | ID=MsG0180005393.01.T01;Parent=MsG0180005393.01;Name=MsG0180005393.01.T01;_AED=0.13;_eAED=0.34;_QI=0|0|0|1|1|1|3|0|157 |
Chr1 | exon | 91240191 | 91240338 | 91240191 | ID=MsG0180005393.01.T01:exon:17603;Parent=MsG0180005393.01.T01 |
Chr1 | exon | 91240690 | 91240731 | 91240690 | ID=MsG0180005393.01.T01:exon:17604;Parent=MsG0180005393.01.T01 |
Chr1 | exon | 91240868 | 91241151 | 91240868 | ID=MsG0180005393.01.T01:exon:17605;Parent=MsG0180005393.01.T01 |
Chr1 | CDS | 91240191 | 91240338 | 91240191 | ID=MsG0180005393.01.T01:cds;Parent=MsG0180005393.01.T01 |
Chr1 | CDS | 91240690 | 91240731 | 91240690 | ID=MsG0180005393.01.T01:cds;Parent=MsG0180005393.01.T01 |
Chr1 | CDS | 91240868 | 91241151 | 91240868 | ID=MsG0180005393.01.T01:cds;Parent=MsG0180005393.01.T01 |
Gene Sequence |
Protein sequence |