Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001522.01.T01 | XP_003599533.1 | 92.565 | 269 | 19 | 1 | 1 | 268 | 1 | 269 | 8.77E-165 | 467 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001522.01.T01 | P09444 | 50.735 | 272 | 116 | 6 | 1 | 266 | 1 | 260 | 5.83E-63 | 201 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001522.01.T01 | G7IZL9 | 92.565 | 269 | 19 | 1 | 1 | 268 | 1 | 269 | 4.19e-165 | 467 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048843.01 | MsG0180001522.01 | 0.808019 | 3.803780e-50 | 2.151032e-47 |
| MsG0080049059.01 | MsG0180001522.01 | 0.807008 | 6.234134e-50 | 3.433705e-47 |
| MsG0180000732.01 | MsG0180001522.01 | 0.800006 | 1.764151e-48 | 8.124788e-46 |
| MsG0180000799.01 | MsG0180001522.01 | 0.812106 | 5.009207e-51 | 3.156494e-48 |
| MsG0180001043.01 | MsG0180001522.01 | 0.805769 | 1.137736e-49 | 6.070895e-47 |
| MsG0180001522.01 | MsG0180002283.01 | 0.805265 | 1.451316e-49 | 7.643787e-47 |
| MsG0180001522.01 | MsG0180002489.01 | 0.862546 | 4.695889e-64 | 1.380358e-60 |
| MsG0180001522.01 | MsG0180002491.01 | 0.851910 | 6.522574e-61 | 1.340042e-57 |
| MsG0180001522.01 | MsG0180003088.01 | 0.844057 | 9.566527e-59 | 1.526327e-55 |
| MsG0180001522.01 | MsG0180003257.01 | 0.805300 | 1.427099e-49 | 7.523277e-47 |
| MsG0180001522.01 | MsG0180003409.01 | 0.839428 | 1.593870e-57 | 2.200561e-54 |
| MsG0180001522.01 | MsG0180003864.01 | 0.808348 | 3.237309e-50 | 1.846706e-47 |
| MsG0180001522.01 | MsG0180005125.01 | 0.825930 | 3.583344e-54 | 3.312405e-51 |
| MsG0180001522.01 | MsG0180005350.01 | 0.813157 | 2.950833e-51 | 1.912164e-48 |
| MsG0180001522.01 | MsG0180006013.01 | 0.846496 | 2.094369e-59 | 3.611824e-56 |
| MsG0180001522.01 | MsG0180006016.01 | 0.830053 | 3.645837e-55 | 3.798553e-52 |
| MsG0180001522.01 | MsG0180006069.01 | 0.826136 | 3.200349e-54 | 2.975699e-51 |
| MsG0180001522.01 | MsG0180006097.01 | 0.805758 | 1.143434e-49 | 6.099759e-47 |
| MsG0180001522.01 | MsG0280006411.01 | 0.851060 | 1.134855e-60 | 2.268700e-57 |
| MsG0180001522.01 | MsG0280006595.01 | 0.835366 | 1.749366e-56 | 2.134784e-53 |
| MsG0180001522.01 | MsG0280006596.01 | 0.802537 | 5.352446e-49 | 2.628502e-46 |
| MsG0180001522.01 | MsG0280007161.01 | 0.811131 | 8.162814e-51 | 5.012072e-48 |
| MsG0180001522.01 | MsG0280007609.01 | 0.806889 | 6.606980e-50 | 3.627855e-47 |
| MsG0180001522.01 | MsG0280007715.01 | 0.826585 | 2.502707e-54 | 2.356744e-51 |
| MsG0180001522.01 | MsG0280008286.01 | 0.874905 | 4.684264e-68 | 2.146057e-64 |
| MsG0180001522.01 | MsG0280008885.01 | 0.807391 | 5.171269e-50 | 2.876892e-47 |
| MsG0180001522.01 | MsG0280008907.01 | 0.830534 | 2.781364e-55 | 2.938508e-52 |
| MsG0180001522.01 | MsG0280008971.01 | 0.820462 | 6.772760e-53 | 5.362708e-50 |
| MsG0180001522.01 | MsG0280009109.01 | 0.816953 | 4.238785e-52 | 3.046472e-49 |
| MsG0180001522.01 | MsG0280009140.01 | 0.825459 | 4.634450e-54 | 4.226453e-51 |
| MsG0180001522.01 | MsG0280009235.01 | 0.801556 | 8.518040e-49 | 4.079940e-46 |
| MsG0180001522.01 | MsG0280010204.01 | 0.822806 | 1.945091e-53 | 1.645169e-50 |
| MsG0180001522.01 | MsG0280010389.01 | 0.818397 | 2.002442e-52 | 1.497328e-49 |
| MsG0180001522.01 | MsG0280010416.01 | 0.823370 | 1.436686e-53 | 1.234545e-50 |
| MsG0180001522.01 | MsG0380012124.01 | 0.804786 | 1.827512e-49 | 9.508040e-47 |
| MsG0180001522.01 | MsG0380012930.01 | 0.911656 | 4.748009e-83 | 1.027938e-78 |
| MsG0180001522.01 | MsG0380013541.01 | 0.822038 | 2.933892e-53 | 2.427630e-50 |
| MsG0180001522.01 | MsG0380014330.01 | 0.802801 | 4.721288e-49 | 2.334304e-46 |
| MsG0180001522.01 | MsG0380014365.01 | 0.812071 | 5.098682e-51 | 3.209749e-48 |
| MsG0180001522.01 | MsG0380014770.01 | 0.811492 | 6.814094e-51 | 4.224149e-48 |
| MsG0180001522.01 | MsG0380014885.01 | 0.808463 | 3.059151e-50 | 1.750355e-47 |
| MsG0180001522.01 | MsG0380015027.01 | 0.810286 | 1.242995e-50 | 7.462347e-48 |
| MsG0180001522.01 | MsG0380015400.01 | 0.815498 | 8.963713e-52 | 6.190631e-49 |
| MsG0180001522.01 | MsG0380015779.01 | 0.802970 | 4.357086e-49 | 2.163359e-46 |
| MsG0180001522.01 | MsG0380015793.01 | -0.831700 | 1.438618e-55 | 1.573482e-52 |
| MsG0180001522.01 | MsG0380015922.01 | 0.803283 | 3.753628e-49 | 1.878722e-46 |
| MsG0180001522.01 | MsG0380017226.01 | 0.839874 | 1.220302e-57 | 1.707973e-54 |
| MsG0180001522.01 | MsG0380017403.01 | 0.808126 | 3.610416e-50 | 2.047468e-47 |
| MsG0180001522.01 | MsG0380017998.01 | 0.837505 | 4.996415e-57 | 6.504160e-54 |
| MsG0180001522.01 | MsG0380018001.01 | 0.839111 | 1.926598e-57 | 2.633874e-54 |
| MsG0180001522.01 | MsG0380018009.01 | 0.802807 | 4.707174e-49 | 2.327756e-46 |
| MsG0180001522.01 | MsG0480018906.01 | 0.818478 | 1.919988e-52 | 1.438807e-49 |
| MsG0180001522.01 | MsG0480018970.01 | 0.807858 | 4.117092e-50 | 2.318245e-47 |
| MsG0180001522.01 | MsG0480020065.01 | 0.845525 | 3.846058e-59 | 6.427501e-56 |
| MsG0180001522.01 | MsG0480020090.01 | 0.834537 | 2.830332e-56 | 3.368995e-53 |
| MsG0180001522.01 | MsG0480020372.01 | 0.850923 | 1.240621e-60 | 2.469190e-57 |
| MsG0180001522.01 | MsG0480020416.01 | 0.819162 | 1.342188e-52 | 1.024922e-49 |
| MsG0180001522.01 | MsG0480020445.01 | 0.806824 | 6.816871e-50 | 3.736890e-47 |
| MsG0180001522.01 | MsG0480020791.01 | 0.818067 | 2.378155e-52 | 1.761940e-49 |
| MsG0180001522.01 | MsG0480020843.01 | 0.816631 | 5.005278e-52 | 3.565412e-49 |
| MsG0180001522.01 | MsG0480021034.01 | 0.822776 | 1.977054e-53 | 1.670828e-50 |
| MsG0180001522.01 | MsG0480021134.01 | 0.813156 | 2.951215e-51 | 1.912406e-48 |
| MsG0180001522.01 | MsG0480021448.01 | 0.843733 | 1.168518e-58 | 1.845305e-55 |
| MsG0180001522.01 | MsG0480021453.01 | 0.803790 | 2.945806e-49 | 1.493833e-46 |
| MsG0180001522.01 | MsG0480021464.01 | 0.832927 | 7.146455e-56 | 8.104893e-53 |
| MsG0180001522.01 | MsG0480021695.01 | 0.812997 | 3.198424e-51 | 2.063878e-48 |
| MsG0180001522.01 | MsG0480021731.01 | 0.812137 | 4.932190e-51 | 3.110610e-48 |
| MsG0180001522.01 | MsG0480021994.01 | 0.824772 | 6.734928e-54 | 6.023810e-51 |
| MsG0180001522.01 | MsG0480022052.01 | -0.824663 | 7.145117e-54 | 6.370865e-51 |
| MsG0180001522.01 | MsG0480022104.01 | 0.851090 | 1.112792e-60 | 2.226893e-57 |
| MsG0180001522.01 | MsG0480022108.01 | 0.837763 | 4.291230e-57 | 5.631074e-54 |
| MsG0180001522.01 | MsG0480022183.01 | 0.855575 | 5.754044e-62 | 1.334438e-58 |
| MsG0180001522.01 | MsG0480022768.01 | 0.811799 | 5.844110e-51 | 3.652102e-48 |
| MsG0180001522.01 | MsG0480023014.01 | 0.810832 | 9.473449e-51 | 5.771049e-48 |
| MsG0180001522.01 | MsG0480023517.01 | 0.800024 | 1.749862e-48 | 8.062544e-46 |
| MsG0180001522.01 | MsG0580024191.01 | 0.807772 | 4.292566e-50 | 2.411767e-47 |
| MsG0180001522.01 | MsG0580024458.01 | -0.815983 | 6.988130e-52 | 4.890528e-49 |
| MsG0180001522.01 | MsG0580025134.01 | 0.874472 | 6.576231e-68 | 2.964480e-64 |
| MsG0180001522.01 | MsG0580025421.01 | 0.800201 | 1.610539e-48 | 7.453896e-46 |
| MsG0180001522.01 | MsG0580025989.01 | 0.803583 | 3.253364e-49 | 1.641100e-46 |
| MsG0180001522.01 | MsG0580027345.01 | 0.814825 | 1.265030e-51 | 8.577153e-49 |
| MsG0180001522.01 | MsG0580028185.01 | 0.833626 | 4.787285e-56 | 5.544115e-53 |
| MsG0180001522.01 | MsG0580028284.01 | 0.801956 | 7.050650e-49 | 3.411493e-46 |
| MsG0180001522.01 | MsG0580028289.01 | 0.818400 | 1.999235e-52 | 1.495060e-49 |
| MsG0180001522.01 | MsG0580029258.01 | 0.801093 | 1.059197e-48 | 5.014937e-46 |
| MsG0180001522.01 | MsG0580029661.01 | 0.813556 | 2.410723e-51 | 1.579388e-48 |
| MsG0180001522.01 | MsG0580029668.01 | -0.804523 | 2.073312e-49 | 1.071315e-46 |
| MsG0180001522.01 | MsG0580029952.01 | 0.815149 | 1.071875e-51 | 7.331338e-49 |
| MsG0180001522.01 | MsG0680030316.01 | 0.801988 | 6.942819e-49 | 3.362085e-46 |
| MsG0180001522.01 | MsG0680030841.01 | 0.802047 | 6.753808e-49 | 3.275499e-46 |
| MsG0180001522.01 | MsG0680031538.01 | 0.813881 | 2.045223e-51 | 1.351766e-48 |
| MsG0180001522.01 | MsG0680031651.01 | 0.818574 | 1.825784e-52 | 1.371771e-49 |
| MsG0180001522.01 | MsG0680031654.01 | 0.800886 | 1.168002e-48 | 5.500939e-46 |
| MsG0180001522.01 | MsG0680032430.01 | 0.863234 | 2.879430e-64 | 8.667902e-61 |
| MsG0180001522.01 | MsG0680034061.01 | 0.864195 | 1.447459e-64 | 4.506173e-61 |
| MsG0180001522.01 | MsG0680035048.01 | 0.805951 | 1.041519e-49 | 5.583397e-47 |
| MsG0180001522.01 | MsG0680035582.01 | 0.822927 | 1.823123e-53 | 1.547316e-50 |
| MsG0180001522.01 | MsG0680035659.01 | 0.814045 | 1.881497e-51 | 1.249086e-48 |
| MsG0180001522.01 | MsG0680035777.01 | 0.832878 | 7.352837e-56 | 8.326841e-53 |
| MsG0180001522.01 | MsG0780037895.01 | 0.801380 | 9.254255e-49 | 4.413010e-46 |
| MsG0180001522.01 | MsG0780038645.01 | 0.822508 | 2.281782e-53 | 1.913714e-50 |
| MsG0180001522.01 | MsG0780039452.01 | 0.832823 | 7.586670e-56 | 8.577361e-53 |
| MsG0180001522.01 | MsG0780039570.01 | 0.804382 | 2.219222e-49 | 1.142598e-46 |
| MsG0180001522.01 | MsG0780039841.01 | 0.851256 | 9.992275e-61 | 2.010615e-57 |
| MsG0180001522.01 | MsG0780040861.01 | 0.862930 | 3.573714e-64 | 1.064738e-60 |
| MsG0180001522.01 | MsG0780040929.01 | 0.823060 | 1.696822e-53 | 1.445610e-50 |
| MsG0180001522.01 | MsG0780041294.01 | 0.809826 | 1.561620e-50 | 9.263619e-48 |
| MsG0180001522.01 | MsG0780041295.01 | 0.844579 | 6.926015e-59 | 1.123186e-55 |
| MsG0180001522.01 | MsG0780041357.01 | 0.802631 | 5.119040e-49 | 2.519925e-46 |
| MsG0180001522.01 | MsG0780041399.01 | 0.821863 | 3.219915e-53 | 2.651341e-50 |
| MsG0180001522.01 | MsG0780041490.01 | 0.802616 | 5.155472e-49 | 2.536906e-46 |
| MsG0180001522.01 | MsG0780041559.01 | 0.801746 | 7.786266e-49 | 3.747370e-46 |
| MsG0180001522.01 | MsG0780041754.01 | 0.832166 | 1.103741e-55 | 1.223694e-52 |
| MsG0180001522.01 | MsG0880041969.01 | 0.842193 | 3.002105e-58 | 4.516335e-55 |
| MsG0180001522.01 | MsG0880042811.01 | 0.854188 | 1.453783e-61 | 3.220675e-58 |
| MsG0180001522.01 | MsG0880043082.01 | 0.846789 | 1.741667e-59 | 3.032136e-56 |
| MsG0180001522.01 | MsG0880043465.01 | 0.830278 | 3.212722e-55 | 3.369168e-52 |
| MsG0180001522.01 | MsG0880044062.01 | -0.835089 | 2.055042e-56 | 2.486623e-53 |
| MsG0180001522.01 | MsG0880045631.01 | 0.858114 | 1.028818e-62 | 2.597376e-59 |
| MsG0180001522.01 | MsG0880045653.01 | 0.839997 | 1.133226e-57 | 1.592511e-54 |
| MsG0180001522.01 | MsG0880045951.01 | 0.812039 | 5.179904e-51 | 3.257927e-48 |
| MsG0180001522.01 | MsG0880046058.01 | 0.842204 | 2.982096e-58 | 4.488131e-55 |
| MsG0180001522.01 | MsG0880046209.01 | 0.809719 | 1.646842e-50 | 9.741810e-48 |
| MsG0180001522.01 | MsG0880046285.01 | 0.802232 | 6.185617e-49 | 3.014144e-46 |
| MsG0180001522.01 | MsG0880046328.01 | 0.800245 | 1.577897e-48 | 7.311113e-46 |
| MsG0180001522.01 | MsG0880046733.01 | 0.801129 | 1.041754e-48 | 4.936576e-46 |
| MsG0180001522.01 | MsG0880046933.01 | 0.815115 | 1.090676e-51 | 7.452951e-49 |
| MsG0180001522.01 | MsG0880047016.01 | 0.810008 | 1.426936e-50 | 8.505456e-48 |
| MsG0180001522.01 | MsG0880047038.01 | 0.802770 | 4.791916e-49 | 2.367339e-46 |
| MsG0180001522.01 | MsG0880047116.01 | 0.849657 | 2.809492e-60 | 5.364090e-57 |
| MsG0180001522.01 | MsG0880047191.01 | 0.814909 | 1.211764e-51 | 8.234320e-49 |
| MsG0180001522.01 | MsG0880047391.01 | 0.801386 | 9.229170e-49 | 4.401668e-46 |
| MsG0180001522.01 | MsG0880047448.01 | 0.803159 | 3.982213e-49 | 1.986865e-46 |
| MsG0180001522.01 | MsG0880047590.01 | 0.820724 | 5.896640e-53 | 4.702727e-50 |
| MsG0180001522.01 | MsG0880047607.01 | 0.855483 | 6.122990e-62 | 1.415761e-58 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001522.01.T01 | MTR_3g034660 | 92.565 | 269 | 19 | 1 | 1 | 268 | 1 | 269 | 1.06e-168 | 467 |
| MsG0180001522.01.T01 | MTR_1g072090 | 49.077 | 271 | 125 | 5 | 1 | 268 | 1 | 261 | 1.61e-68 | 213 |
| MsG0180001522.01.T01 | MTR_1g103620 | 47.940 | 267 | 125 | 5 | 1 | 266 | 1 | 254 | 1.22e-67 | 211 |
| MsG0180001522.01.T01 | MTR_1g072090 | 50.000 | 214 | 99 | 4 | 1 | 211 | 1 | 209 | 5.39e-57 | 182 |
| MsG0180001522.01.T01 | MTR_1g081760 | 41.455 | 275 | 116 | 5 | 1 | 267 | 1 | 238 | 1.59e-41 | 143 |
| MsG0180001522.01.T01 | MTR_2g076230 | 39.416 | 137 | 76 | 3 | 1 | 137 | 43 | 172 | 3.26e-23 | 94.7 |
| MsG0180001522.01.T01 | MTR_2g076230 | 39.416 | 137 | 76 | 3 | 1 | 137 | 43 | 172 | 6.56e-23 | 94.7 |
| MsG0180001522.01.T01 | MTR_2g076220 | 40.336 | 119 | 65 | 2 | 1 | 119 | 1 | 113 | 4.02e-22 | 89.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0180001522.01.T01 | AT3G22500 | 46.038 | 265 | 129 | 5 | 1 | 265 | 1 | 251 | 7.39e-57 | 183 |
| MsG0180001522.01.T01 | AT3G22490 | 43.542 | 271 | 126 | 5 | 5 | 266 | 6 | 258 | 3.71e-56 | 181 |
| MsG0180001522.01.T01 | AT1G03120 | 49.618 | 131 | 61 | 1 | 137 | 267 | 56 | 181 | 2.08e-29 | 110 |
| MsG0180001522.01.T01 | AT5G27980 | 53.465 | 101 | 47 | 0 | 139 | 239 | 68 | 168 | 3.40e-25 | 99.4 |
| MsG0180001522.01.T01 | AT5G53260 | 42.188 | 128 | 69 | 1 | 140 | 267 | 50 | 172 | 1.45e-18 | 81.3 |
| MsG0180001522.01.T01 | AT5G53270 | 42.063 | 126 | 68 | 1 | 140 | 265 | 31 | 151 | 3.18e-16 | 74.3 |
| MsG0180001522.01.T01 | AT1G03120 | 53.333 | 75 | 35 | 0 | 137 | 211 | 56 | 130 | 1.34e-14 | 69.3 |
Find 87 sgRNAs with CRISPR-Local
Find 141 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCACTTTGTGCCTATGAATA+TGG | 0.166083 | 1:-22627855 | MsG0180001522.01.T01:CDS |
| CACCGTATTTGATGGGTTCT+TGG | 0.267760 | 1:+22628179 | None:intergenic |
| CCATGGTTCTTCATGTTTCA+TGG | 0.274279 | 1:+22626170 | None:intergenic |
| GTGTGAGGCCTGGCGGTGTC+GGG | 0.275992 | 1:-22627691 | MsG0180001522.01.T01:CDS |
| TGTGTGAGGCCTGGCGGTGT+CGG | 0.283706 | 1:-22627692 | MsG0180001522.01.T01:CDS |
| ATGGCTGCAGCAGGACTTCC+TGG | 0.305505 | 1:+22628055 | None:intergenic |
| CTCTCAACAGCCACGCTAAT+CGG | 0.330105 | 1:-22627646 | MsG0180001522.01.T01:CDS |
| CCATCAGTGCTGCTGAGATT+AGG | 0.336376 | 1:-22627730 | MsG0180001522.01.T01:CDS |
| GCCATGTTAGCGGCCACTTG+TGG | 0.347945 | 1:+22628112 | None:intergenic |
| CATCAGTGCTGCTGAGATTA+GGG | 0.357619 | 1:-22627729 | MsG0180001522.01.T01:CDS |
| CCATGTTAGCGGCCACTTGT+GGG | 0.359786 | 1:+22628113 | None:intergenic |
| AAAACTTTCTGATGTGTTAA+CGG | 0.360481 | 1:-22627609 | MsG0180001522.01.T01:intron |
| GCCGCTTGCATGGCTGCAGC+AGG | 0.364075 | 1:+22628046 | None:intergenic |
| CACTTTGTGCCTATGAATAT+GGG | 0.375801 | 1:-22627854 | MsG0180001522.01.T01:CDS |
| CGGATAAGCTGGTGGCGGAC+AGG | 0.381930 | 1:-22626324 | MsG0180001522.01.T01:CDS |
| GCCTGGCGGTGTCGGGGCGA+CGG | 0.386365 | 1:-22627684 | MsG0180001522.01.T01:CDS |
| GCCGTCGCCCCGACACCGCC+AGG | 0.387638 | 1:+22627683 | None:intergenic |
| GAAAACATCACCGTATTTGA+TGG | 0.395353 | 1:+22628171 | None:intergenic |
| GTTAATCTCTTCTTGAAGCC+TGG | 0.405950 | 1:+22628201 | None:intergenic |
| GCGGTTGATGGTCAGATTAT+AGG | 0.409172 | 1:-22627899 | MsG0180001522.01.T01:CDS |
| CTTCTTGAAGCCTGGTTGGT+TGG | 0.415684 | 1:+22628209 | None:intergenic |
| GTTGTGACGGAGGCGGTTGA+TGG | 0.427340 | 1:-22627911 | MsG0180001522.01.T01:CDS |
| GAAGCCTGGTTGGTTGGCCA+TGG | 0.430327 | 1:+22628215 | None:intergenic |
| GCCTATGAATATGGGCTTTG+CGG | 0.430604 | 1:-22627846 | MsG0180001522.01.T01:CDS |
| GTTAGAAGTGGCGGGGATAT+CGG | 0.431798 | 1:-22627789 | MsG0180001522.01.T01:CDS |
| ATAGGCACAAAGTGCGCGTC+AGG | 0.451108 | 1:+22627863 | None:intergenic |
| ATCTCTTCTTGAAGCCTGGT+TGG | 0.457290 | 1:+22628205 | None:intergenic |
| GATATCGGTTGGTGATAAAC+CGG | 0.458559 | 1:-22627774 | MsG0180001522.01.T01:CDS |
| GATCATTGCGGCCGCTTGCA+TGG | 0.469213 | 1:+22628036 | None:intergenic |
| TCGTCATGGTATAGCAGAAA+TGG | 0.469856 | 1:-22627984 | MsG0180001522.01.T01:CDS |
| GGATAAGCTGGTGGCGGACA+GGG | 0.474816 | 1:-22626323 | MsG0180001522.01.T01:CDS |
| GGAGAGAGGTGTGTGAGGCC+TGG | 0.480169 | 1:-22627701 | MsG0180001522.01.T01:CDS |
| CCCACAAGTGGCCGCTAACA+TGG | 0.487849 | 1:-22628113 | MsG0180001522.01.T01:CDS |
| CCTAATCTCAGCAGCACTGA+TGG | 0.492034 | 1:+22627730 | None:intergenic |
| AACCAAGAACCCATCAAATA+CGG | 0.492643 | 1:-22628181 | MsG0180001522.01.T01:CDS |
| ATAGGATGCGGCGGATAAGC+TGG | 0.493945 | 1:-22626335 | MsG0180001522.01.T01:intron |
| TTCTGCTGCAGCCATGTTAG+CGG | 0.499845 | 1:+22628102 | None:intergenic |
| TCCTGCTGCAGCCATGCAAG+CGG | 0.501385 | 1:-22628047 | MsG0180001522.01.T01:CDS |
| GCCGCAAAGCCCATATTCAT+AGG | 0.505709 | 1:+22627845 | None:intergenic |
| GAGCTTAGCTGTTGTGGCCA+TGG | 0.506595 | 1:+22626195 | None:intergenic |
| CAATGGCTCGTTGGTCGTCA+TGG | 0.509926 | 1:-22627998 | MsG0180001522.01.T01:CDS |
| TGTGAGGCCTGGCGGTGTCG+GGG | 0.521665 | 1:-22627690 | MsG0180001522.01.T01:CDS |
| AAAACATCACCGTATTTGAT+GGG | 0.527182 | 1:+22628172 | None:intergenic |
| TGGTGGAATAGCTGCATCCA+TGG | 0.532996 | 1:-22626212 | MsG0180001522.01.T01:CDS |
| GGAGAGGCGTTAGAAGTGGC+GGG | 0.533131 | 1:-22627797 | MsG0180001522.01.T01:CDS |
| AGGCCTCACACACCTCTCTC+CGG | 0.534996 | 1:+22627703 | None:intergenic |
| TGCCGACCGTCGTGTTGTGA+CGG | 0.537709 | 1:-22627924 | MsG0180001522.01.T01:CDS |
| ATGGTTGAGCTTAGCTGTTG+TGG | 0.554386 | 1:+22626189 | None:intergenic |
| TCAGCATCGTTCTGATCCAC+CGG | 0.561215 | 1:+22627755 | None:intergenic |
| GCTGCTGAGATTAGGGCTAC+CGG | 0.568023 | 1:-22627722 | MsG0180001522.01.T01:CDS |
| CATGTTAGCGGCCACTTGTG+GGG | 0.571385 | 1:+22628114 | None:intergenic |
| CTCCGTCACAACACGACGGT+CGG | 0.572167 | 1:+22627922 | None:intergenic |
| CCGTCGTGTTGTGACGGAGG+CGG | 0.578384 | 1:-22627918 | MsG0180001522.01.T01:CDS |
| GCATCTGCACAATGGCTCGT+TGG | 0.578751 | 1:-22628007 | MsG0180001522.01.T01:CDS |
| GATGACGATCCGATCACTAT+CGG | 0.581623 | 1:-22627818 | MsG0180001522.01.T01:CDS |
| CGGAGAGGCGTTAGAAGTGG+CGG | 0.590961 | 1:-22627798 | MsG0180001522.01.T01:CDS |
| AACGCCTCTCCGATAGTGAT+CGG | 0.591968 | 1:+22627809 | None:intergenic |
| TGAGCCATGGCCAACCAACC+AGG | 0.605511 | 1:-22628219 | MsG0180001522.01.T01:CDS |
| TGAGACAATCTCCCCACAAG+TGG | 0.610093 | 1:-22628125 | MsG0180001522.01.T01:CDS |
| GAAGTGGCGGGGATATCGGT+TGG | 0.611879 | 1:-22627785 | MsG0180001522.01.T01:CDS |
| TGCGGCGGATAAGCTGGTGG+CGG | 0.616093 | 1:-22626329 | MsG0180001522.01.T01:CDS |
| TATCGGAGAGGCGTTAGAAG+TGG | 0.617007 | 1:-22627801 | MsG0180001522.01.T01:CDS |
| TAAGCTGGTGGCGGACAGGG+CGG | 0.617043 | 1:-22626320 | MsG0180001522.01.T01:CDS |
| AGATTAGGGCTACCGGAGAG+AGG | 0.625834 | 1:-22627715 | MsG0180001522.01.T01:CDS |
| ATGGATGCAGCTATTCCACC+AGG | 0.630413 | 1:+22626214 | None:intergenic |
| ATGATGAATATTGCTGAACC+TGG | 0.635512 | 1:-22626232 | MsG0180001522.01.T01:CDS |
| ATGAATATTGCTGAACCTGG+TGG | 0.635922 | 1:-22626229 | MsG0180001522.01.T01:CDS |
| ATCGGTTGGTGATAAACCGG+TGG | 0.639207 | 1:-22627771 | MsG0180001522.01.T01:CDS |
| AAACACAACACAATGAGCCA+TGG | 0.639243 | 1:-22628232 | None:intergenic |
| CTACCGGAGAGAGGTGTGTG+AGG | 0.640214 | 1:-22627706 | MsG0180001522.01.T01:CDS |
| TGTATATATATAGGATGCGG+CGG | 0.642444 | 1:-22626344 | MsG0180001522.01.T01:intron |
| ATTAGCGTGGCTGTTGAGAG+CGG | 0.645143 | 1:+22627649 | None:intergenic |
| CGACCGTCGTGTTGTGACGG+AGG | 0.646821 | 1:-22627921 | MsG0180001522.01.T01:CDS |
| TCAGATTATAGGACGGCGCG+TGG | 0.654489 | 1:-22627888 | MsG0180001522.01.T01:CDS |
| TCAACGAGGCATCTGCACAA+TGG | 0.666804 | 1:-22628015 | MsG0180001522.01.T01:CDS |
| TCTCTTCAATCCGATTAGCG+TGG | 0.674286 | 1:+22627636 | None:intergenic |
| AGAAGCTGTGTATGATGCAG+AGG | 0.680635 | 1:-22626281 | MsG0180001522.01.T01:CDS |
| GAGAGGCGTTAGAAGTGGCG+GGG | 0.680725 | 1:-22627796 | MsG0180001522.01.T01:CDS |
| AGATGCCTCGTTGATCATTG+CGG | 0.682722 | 1:+22628024 | None:intergenic |
| TTGATGGTCAGATTATAGGA+CGG | 0.688715 | 1:-22627895 | MsG0180001522.01.T01:CDS |
| AATATTCATCATTTGCTGTG+TGG | 0.693485 | 1:+22626243 | None:intergenic |
| GAGAGGTGTGTGAGGCCTGG+CGG | 0.694862 | 1:-22627698 | MsG0180001522.01.T01:CDS |
| GGATGCGGCGGATAAGCTGG+TGG | 0.723628 | 1:-22626332 | MsG0180001522.01.T01:CDS |
| CGATCCGATCACTATCGGAG+AGG | 0.731692 | 1:-22627813 | MsG0180001522.01.T01:CDS |
| AGCGGCCGCAATGATCAACG+AGG | 0.739216 | 1:-22628029 | MsG0180001522.01.T01:CDS |
| CCGCCTCCGTCACAACACGA+CGG | 0.744880 | 1:+22627918 | None:intergenic |
| TGTTCGTGTGACAGAAACAA+CGG | 0.764152 | 1:-22627948 | MsG0180001522.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATACAAGATTATAATTGATT+AGG | - | Chr1:22626869-22626888 | MsG0180001522.01.T01:intron | 15.0% |
| !! | TAACTAAAATATATGTTGAA+GGG | - | Chr1:22627768-22627787 | MsG0180001522.01.T01:CDS | 15.0% |
| !! | TTAACTAAAATATATGTTGA+AGG | - | Chr1:22627767-22627786 | MsG0180001522.01.T01:CDS | 15.0% |
| !! | TTTAACTAACTAATCAAAAA+AGG | + | Chr1:22626896-22626915 | None:intergenic | 15.0% |
| !!! | AATTTTGTGAAATTGTAATA+TGG | - | Chr1:22627743-22627762 | MsG0180001522.01.T01:CDS | 15.0% |
| !!! | CATGTTATTATTATGTTTTT+TGG | - | Chr1:22627102-22627121 | MsG0180001522.01.T01:intron | 15.0% |
| !! | TGTAGAATTGAAATTTCATA+TGG | - | Chr1:22627882-22627901 | MsG0180001522.01.T01:CDS | 20.0% |
| !!! | AAATATTACAAAGTACTCAT+TGG | + | Chr1:22628026-22628045 | None:intergenic | 20.0% |
| !!! | GAGTACTTTGTAATATTTTT+TGG | - | Chr1:22628028-22628047 | MsG0180001522.01.T01:CDS | 20.0% |
| !!! | TACTTTGTAATATTTTTTGG+TGG | - | Chr1:22628031-22628050 | MsG0180001522.01.T01:CDS | 20.0% |
| !!! | TGATTAGTTAGTTAAATACT+TGG | - | Chr1:22626900-22626919 | MsG0180001522.01.T01:intron | 20.0% |
| !!! | TTTATTTTTTAGTGTGTGTT+TGG | - | Chr1:22627256-22627275 | MsG0180001522.01.T01:intron | 20.0% |
| ! | AAAACTTTCTGATGTGTTAA+CGG | - | Chr1:22626791-22626810 | MsG0180001522.01.T01:intron | 25.0% |
| ! | CCATATATAAAGCTACAAAT+CGG | - | Chr1:22627167-22627186 | MsG0180001522.01.T01:intron | 25.0% |
| ! | TGTTTGGTATTATGGATTTA+CGG | - | Chr1:22627272-22627291 | MsG0180001522.01.T01:intron | 25.0% |
| ! | TTAGTTAGTTAAATACTTGG+AGG | - | Chr1:22626903-22626922 | MsG0180001522.01.T01:intron | 25.0% |
| ! | TTGATGAGCAAAATTGATAT+AGG | - | Chr1:22627711-22627730 | MsG0180001522.01.T01:CDS | 25.0% |
| AAAACATCACCGTATTTGAT+GGG | + | Chr1:22626231-22626250 | None:intergenic | 30.0% | |
| AAGCACTTATAGTGAATGTA+AGG | - | Chr1:22626936-22626955 | MsG0180001522.01.T01:intron | 30.0% | |
| ATGAGCAAAATTGATATAGG+TGG | - | Chr1:22627714-22627733 | MsG0180001522.01.T01:CDS | 30.0% | |
| GAAACCATATATAAGCAACT+CGG | - | Chr1:22627480-22627499 | MsG0180001522.01.T01:intron | 30.0% | |
| GTAGTGTTTGTTTGGTATTA+CGG | - | Chr1:22627540-22627559 | MsG0180001522.01.T01:intron | 30.0% | |
| GTGTGTATATATATAGGATG+CGG | - | Chr1:22628053-22628072 | MsG0180001522.01.T01:CDS | 30.0% | |
| TCTTAGTGTGTTTGGTATTA+TGG | - | Chr1:22627394-22627413 | MsG0180001522.01.T01:intron | 30.0% | |
| TGTTTGGTACTCATTGTATT+TGG | - | Chr1:22627513-22627532 | MsG0180001522.01.T01:intron | 30.0% | |
| TTAGTGTGTGTTTGGTATTA+TGG | - | Chr1:22627264-22627283 | MsG0180001522.01.T01:intron | 30.0% | |
| !! | AATATTCATCATTTGCTGTG+TGG | + | Chr1:22628160-22628179 | None:intergenic | 30.0% |
| !! | CCGATTTGTAGCTTTATATA+TGG | + | Chr1:22627170-22627189 | None:intergenic | 30.0% |
| !! | GTGTAGCTTTTGAAAAATCA+CGG | - | Chr1:22627614-22627633 | MsG0180001522.01.T01:CDS | 30.0% |
| !! | TTGGTGGTGTGTATATATAT+AGG | - | Chr1:22628047-22628066 | MsG0180001522.01.T01:CDS | 30.0% |
| AACCAAGAACCCATCAAATA+CGG | - | Chr1:22626219-22626238 | MsG0180001522.01.T01:CDS | 35.0% | |
| AAGCAAAGCTAGAATCAAAG+TGG | + | Chr1:22627669-22627688 | None:intergenic | 35.0% | |
| AGTGTGTTTGGTATTATGGT+AGG | - | Chr1:22627398-22627417 | MsG0180001522.01.T01:intron | 35.0% | |
| ATGATGAATATTGCTGAACC+TGG | - | Chr1:22628168-22628187 | MsG0180001522.01.T01:CDS | 35.0% | |
| CACTTTGTGCCTATGAATAT+GGG | - | Chr1:22626546-22626565 | MsG0180001522.01.T01:intron | 35.0% | |
| GAAAACATCACCGTATTTGA+TGG | + | Chr1:22626232-22626251 | None:intergenic | 35.0% | |
| GATATATACTAACGTGCGTT+TGG | + | Chr1:22627202-22627221 | None:intergenic | 35.0% | |
| GTATCAGTTTGTCAGAATCT+CGG | + | Chr1:22627647-22627666 | None:intergenic | 35.0% | |
| GTGTAGCTTCTACAATATCA+CGG | + | Chr1:22627325-22627344 | None:intergenic | 35.0% | |
| GTTTGGTATCTTAGTGTGTT+TGG | - | Chr1:22627386-22627405 | MsG0180001522.01.T01:intron | 35.0% | |
| TAATCAACTTAGTGCGTGTT+TGG | - | Chr1:22627369-22627388 | MsG0180001522.01.T01:intron | 35.0% | |
| TCTCTGCTGGAAAATGTAAT+TGG | + | Chr1:22627944-22627963 | None:intergenic | 35.0% | |
| TGGTATTATGGATTTACGGT+GGG | - | Chr1:22627276-22627295 | MsG0180001522.01.T01:intron | 35.0% | |
| TGTATATATATAGGATGCGG+CGG | - | Chr1:22628056-22628075 | MsG0180001522.01.T01:CDS | 35.0% | |
| TTGGTATCGTAGTGTTTGTT+TGG | - | Chr1:22627532-22627551 | MsG0180001522.01.T01:intron | 35.0% | |
| TTGGTATTATGGATTTACGG+TGG | - | Chr1:22627275-22627294 | MsG0180001522.01.T01:intron | 35.0% | |
| ! | ACCTAGTTAGTACTCTTTTG+CGG | + | Chr1:22627981-22628000 | None:intergenic | 35.0% |
| ! | CAGCAGAATTCAACGTTTTA+GGG | - | Chr1:22626313-22626332 | MsG0180001522.01.T01:CDS | 35.0% |
| ! | TAAGTGTCTGTTCGTTTTAG+TGG | + | Chr1:22627228-22627247 | None:intergenic | 35.0% |
| ! | TTGATGGTCAGATTATAGGA+CGG | - | Chr1:22626505-22626524 | MsG0180001522.01.T01:intron | 35.0% |
| !! | ATATATAAGCAACTCGGTGT+CGG | - | Chr1:22627486-22627505 | MsG0180001522.01.T01:intron | 35.0% |
| ACGACAGATAACTGTGATTC+TGG | + | Chr1:22627574-22627593 | None:intergenic | 40.0% | |
| ACGGTAGATGACCGTAATTA+TGG | + | Chr1:22627306-22627325 | None:intergenic | 40.0% | |
| ATGAATATTGCTGAACCTGG+TGG | - | Chr1:22628171-22628190 | MsG0180001522.01.T01:CDS | 40.0% | |
| CGGTGGGTATACCATAATTA+CGG | - | Chr1:22627292-22627311 | MsG0180001522.01.T01:intron | 40.0% | |
| CTTTCATGACTAATCTCTGC+TGG | + | Chr1:22627957-22627976 | None:intergenic | 40.0% | |
| GACACCGAGTTGCTTATATA+TGG | + | Chr1:22627487-22627506 | None:intergenic | 40.0% | |
| GAGTACTAACTAGGTTGTCT+AGG | - | Chr1:22627986-22628005 | MsG0180001522.01.T01:CDS | 40.0% | |
| GCACTTTGTGCCTATGAATA+TGG | - | Chr1:22626545-22626564 | MsG0180001522.01.T01:intron | 40.0% | |
| GTTAATCTCTTCTTGAAGCC+TGG | + | Chr1:22626202-22626221 | None:intergenic | 40.0% | |
| TCGTCATGGTATAGCAGAAA+TGG | - | Chr1:22626416-22626435 | MsG0180001522.01.T01:intron | 40.0% | |
| TGTTCGTGTGACAGAAACAA+CGG | - | Chr1:22626452-22626471 | MsG0180001522.01.T01:intron | 40.0% | |
| ! | GCAGCAGAATTCAACGTTTT+AGG | - | Chr1:22626312-22626331 | MsG0180001522.01.T01:CDS | 40.0% |
| !! | GATATCGGTTGGTGATAAAC+CGG | - | Chr1:22626626-22626645 | MsG0180001522.01.T01:intron | 40.0% |
| !! | TCCGCAAAAGAGTACTAACT+AGG | - | Chr1:22627977-22627996 | MsG0180001522.01.T01:CDS | 40.0% |
| !! | TGTCTGTTCGTTTTAGTGGT+AGG | + | Chr1:22627224-22627243 | None:intergenic | 40.0% |
| AGAAGCTGTGTATGATGCAG+AGG | - | Chr1:22628119-22628138 | MsG0180001522.01.T01:CDS | 45.0% | |
| AGATGCCTCGTTGATCATTG+CGG | + | Chr1:22626379-22626398 | None:intergenic | 45.0% | |
| ATCTCTTCTTGAAGCCTGGT+TGG | + | Chr1:22626198-22626217 | None:intergenic | 45.0% | |
| ATGGTTGAGCTTAGCTGTTG+TGG | + | Chr1:22628214-22628233 | None:intergenic | 45.0% | |
| GATGACGATCCGATCACTAT+CGG | - | Chr1:22626582-22626601 | MsG0180001522.01.T01:intron | 45.0% | |
| GCCTATGAATATGGGCTTTG+CGG | - | Chr1:22626554-22626573 | MsG0180001522.01.T01:intron | 45.0% | |
| TCTCTTCAATCCGATTAGCG+TGG | + | Chr1:22626767-22626786 | None:intergenic | 45.0% | |
| TGGTAGGTATGCCAGAATCA+CGG | - | Chr1:22627414-22627433 | MsG0180001522.01.T01:intron | 45.0% | |
| ! | CATCAGTGCTGCTGAGATTA+GGG | - | Chr1:22626671-22626690 | MsG0180001522.01.T01:intron | 45.0% |
| ! | GGTGATGTTTTCAACGTCTC+TGG | - | Chr1:22626240-22626259 | MsG0180001522.01.T01:CDS | 45.0% |
| !! | CACCGTATTTGATGGGTTCT+TGG | + | Chr1:22626224-22626243 | None:intergenic | 45.0% |
| !! | GCGGTTGATGGTCAGATTAT+AGG | - | Chr1:22626501-22626520 | MsG0180001522.01.T01:intron | 45.0% |
| AACGCCTCTCCGATAGTGAT+CGG | + | Chr1:22626594-22626613 | None:intergenic | 50.0% | |
| ACGACAGATGACCGTGATTC+TGG | + | Chr1:22627428-22627447 | None:intergenic | 50.0% | |
| ATGGATGCAGCTATTCCACC+AGG | + | Chr1:22628189-22628208 | None:intergenic | 50.0% | |
| ATTAGCGTGGCTGTTGAGAG+CGG | + | Chr1:22626754-22626773 | None:intergenic | 50.0% | |
| CTCTCAACAGCCACGCTAAT+CGG | - | Chr1:22626754-22626773 | MsG0180001522.01.T01:intron | 50.0% | |
| CTTCTTGAAGCCTGGTTGGT+TGG | + | Chr1:22626194-22626213 | None:intergenic | 50.0% | |
| GCCGCAAAGCCCATATTCAT+AGG | + | Chr1:22626558-22626577 | None:intergenic | 50.0% | |
| TCAGCATCGTTCTGATCCAC+CGG | + | Chr1:22626648-22626667 | None:intergenic | 50.0% | |
| TGAGACAATCTCCCCACAAG+TGG | - | Chr1:22626275-22626294 | MsG0180001522.01.T01:CDS | 50.0% | |
| TGGTGGAATAGCTGCATCCA+TGG | - | Chr1:22628188-22628207 | MsG0180001522.01.T01:CDS | 50.0% | |
| TTCTGCTGCAGCCATGTTAG+CGG | + | Chr1:22626301-22626320 | None:intergenic | 50.0% | |
| ! | CCATCAGTGCTGCTGAGATT+AGG | - | Chr1:22626670-22626689 | MsG0180001522.01.T01:intron | 50.0% |
| ! | CCTAATCTCAGCAGCACTGA+TGG | + | Chr1:22626673-22626692 | None:intergenic | 50.0% |
| ! | GTTAGAAGTGGCGGGGATAT+CGG | - | Chr1:22626611-22626630 | MsG0180001522.01.T01:intron | 50.0% |
| ! | TCAACGAGGCATCTGCACAA+TGG | - | Chr1:22626385-22626404 | MsG0180001522.01.T01:intron | 50.0% |
| !! | ATCGGTTGGTGATAAACCGG+TGG | - | Chr1:22626629-22626648 | MsG0180001522.01.T01:intron | 50.0% |
| !! | TATCGGAGAGGCGTTAGAAG+TGG | - | Chr1:22626599-22626618 | MsG0180001522.01.T01:intron | 50.0% |
| !!! | GTTTTAGGGCATGCACAACC+AGG | - | Chr1:22626327-22626346 | MsG0180001522.01.T01:CDS | 50.0% |
| AGATTAGGGCTACCGGAGAG+AGG | - | Chr1:22626685-22626704 | MsG0180001522.01.T01:intron | 55.0% | |
| ATAGGATGCGGCGGATAAGC+TGG | - | Chr1:22628065-22628084 | MsG0180001522.01.T01:CDS | 55.0% | |
| ATAGGCACAAAGTGCGCGTC+AGG | + | Chr1:22626540-22626559 | None:intergenic | 55.0% | |
| CAATGGCTCGTTGGTCGTCA+TGG | - | Chr1:22626402-22626421 | MsG0180001522.01.T01:intron | 55.0% | |
| CATGTTAGCGGCCACTTGTG+GGG | + | Chr1:22626289-22626308 | None:intergenic | 55.0% | |
| CCATGTTAGCGGCCACTTGT+GGG | + | Chr1:22626290-22626309 | None:intergenic | 55.0% | |
| CGATCCGATCACTATCGGAG+AGG | - | Chr1:22626587-22626606 | MsG0180001522.01.T01:intron | 55.0% | |
| GAGCTTAGCTGTTGTGGCCA+TGG | + | Chr1:22628208-22628227 | None:intergenic | 55.0% | |
| GCATCTGCACAATGGCTCGT+TGG | - | Chr1:22626393-22626412 | MsG0180001522.01.T01:intron | 55.0% | |
| GCTGCTGAGATTAGGGCTAC+CGG | - | Chr1:22626678-22626697 | MsG0180001522.01.T01:intron | 55.0% | |
| TCAGATTATAGGACGGCGCG+TGG | - | Chr1:22626512-22626531 | MsG0180001522.01.T01:intron | 55.0% | |
| !! | ACTCGGTGTCGGTGTGTGTT+TGG | - | Chr1:22627497-22627516 | MsG0180001522.01.T01:intron | 55.0% |
| AGCGGCCGCAATGATCAACG+AGG | - | Chr1:22626371-22626390 | MsG0180001522.01.T01:intron | 60.0% | |
| AGGCCTCACACACCTCTCTC+CGG | + | Chr1:22626700-22626719 | None:intergenic | 60.0% | |
| ATGGCTGCAGCAGGACTTCC+TGG | + | Chr1:22626348-22626367 | None:intergenic | 60.0% | |
| CCCACAAGTGGCCGCTAACA+TGG | - | Chr1:22626287-22626306 | MsG0180001522.01.T01:CDS | 60.0% | |
| CTCCGTCACAACACGACGGT+CGG | + | Chr1:22626481-22626500 | None:intergenic | 60.0% | |
| GATCATTGCGGCCGCTTGCA+TGG | + | Chr1:22626367-22626386 | None:intergenic | 60.0% | |
| GCCATGTTAGCGGCCACTTG+TGG | + | Chr1:22626291-22626310 | None:intergenic | 60.0% | |
| TCCTGCTGCAGCCATGCAAG+CGG | - | Chr1:22626353-22626372 | MsG0180001522.01.T01:intron | 60.0% | |
| TGAGCCATGGCCAACCAACC+AGG | - | Chr1:22626181-22626200 | MsG0180001522.01.T01:CDS | 60.0% | |
| TGCCGACCGTCGTGTTGTGA+CGG | - | Chr1:22626476-22626495 | MsG0180001522.01.T01:intron | 60.0% | |
| ! | CTACCGGAGAGAGGTGTGTG+AGG | - | Chr1:22626694-22626713 | MsG0180001522.01.T01:intron | 60.0% |
| ! | GAAGCCTGGTTGGTTGGCCA+TGG | + | Chr1:22626188-22626207 | None:intergenic | 60.0% |
| ! | GAAGTGGCGGGGATATCGGT+TGG | - | Chr1:22626615-22626634 | MsG0180001522.01.T01:intron | 60.0% |
| ! | GTTGTGACGGAGGCGGTTGA+TGG | - | Chr1:22626489-22626508 | MsG0180001522.01.T01:intron | 60.0% |
| !! | CGGAGAGGCGTTAGAAGTGG+CGG | - | Chr1:22626602-22626621 | MsG0180001522.01.T01:intron | 60.0% |
| !! | GAGAGGCGTTAGAAGTGGCG+GGG | - | Chr1:22626604-22626623 | MsG0180001522.01.T01:intron | 60.0% |
| !! | GGAGAGGCGTTAGAAGTGGC+GGG | - | Chr1:22626603-22626622 | MsG0180001522.01.T01:intron | 60.0% |
| !! | GGATAAGCTGGTGGCGGACA+GGG | - | Chr1:22628077-22628096 | MsG0180001522.01.T01:CDS | 60.0% |
| CCGCCTCCGTCACAACACGA+CGG | + | Chr1:22626485-22626504 | None:intergenic | 65.0% | |
| CGACCGTCGTGTTGTGACGG+AGG | - | Chr1:22626479-22626498 | MsG0180001522.01.T01:intron | 65.0% | |
| GGATGCGGCGGATAAGCTGG+TGG | - | Chr1:22628068-22628087 | MsG0180001522.01.T01:CDS | 65.0% | |
| TGCGGCGGATAAGCTGGTGG+CGG | - | Chr1:22628071-22628090 | MsG0180001522.01.T01:CDS | 65.0% | |
| TGTGTGAGGCCTGGCGGTGT+CGG | - | Chr1:22626708-22626727 | MsG0180001522.01.T01:intron | 65.0% | |
| ! | CCGTCGTGTTGTGACGGAGG+CGG | - | Chr1:22626482-22626501 | MsG0180001522.01.T01:intron | 65.0% |
| ! | GAGAGGTGTGTGAGGCCTGG+CGG | - | Chr1:22626702-22626721 | MsG0180001522.01.T01:intron | 65.0% |
| ! | GGAGAGAGGTGTGTGAGGCC+TGG | - | Chr1:22626699-22626718 | MsG0180001522.01.T01:intron | 65.0% |
| !! | CGGATAAGCTGGTGGCGGAC+AGG | - | Chr1:22628076-22628095 | MsG0180001522.01.T01:CDS | 65.0% |
| !! | TAAGCTGGTGGCGGACAGGG+CGG | - | Chr1:22628080-22628099 | MsG0180001522.01.T01:CDS | 65.0% |
| GCCGCTTGCATGGCTGCAGC+AGG | + | Chr1:22626357-22626376 | None:intergenic | 70.0% | |
| GTGTGAGGCCTGGCGGTGTC+GGG | - | Chr1:22626709-22626728 | MsG0180001522.01.T01:intron | 70.0% | |
| ! | TGTGAGGCCTGGCGGTGTCG+GGG | - | Chr1:22626710-22626729 | MsG0180001522.01.T01:intron | 70.0% |
| !! | GCCTGGCGGTGTCGGGGCGA+CGG | - | Chr1:22626716-22626735 | MsG0180001522.01.T01:intron | 80.0% |
| ! | GCCGTCGCCCCGACACCGCC+AGG | + | Chr1:22626720-22626739 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr1 | gene | 22626180 | 22628242 | 22626180 | ID=MsG0180001522.01;Name=MsG0180001522.01 |
| Chr1 | mRNA | 22626180 | 22628242 | 22626180 | ID=MsG0180001522.01.T01;Parent=MsG0180001522.01;Name=MsG0180001522.01.T01;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|1|1|2|0|268 |
| Chr1 | exon | 22627610 | 22628242 | 22627610 | ID=MsG0180001522.01.T01:exon:482;Parent=MsG0180001522.01.T01 |
| Chr1 | exon | 22626180 | 22626353 | 22626180 | ID=MsG0180001522.01.T01:exon:483;Parent=MsG0180001522.01.T01 |
| Chr1 | CDS | 22627610 | 22628242 | 22627610 | ID=MsG0180001522.01.T01:cds;Parent=MsG0180001522.01.T01 |
| Chr1 | CDS | 22626180 | 22626353 | 22626180 | ID=MsG0180001522.01.T01:cds;Parent=MsG0180001522.01.T01 |
| Gene Sequence |
| Protein sequence |
