AlfalfaGEDB | MsG0380015101.01

M. sativa cultivar ZhongmuNo.1 / MsG0380015101.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015101.01.T01	XP_003600574.1	45.161	155	67	4	8	154	149	293	3.16E-21	100

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015101.01.T01	G7IV74	45.161	155	67	4	8	154	149	293	1.51e-21	100

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080047957.01	MsG0380015101.01	0.809100	2.235748e-50	1.300914e-47
MsG0080047959.01	MsG0380015101.01	0.812107	5.006396e-51	3.154808e-48
MsG0080048461.01	MsG0380015101.01	0.809915	1.494276e-50	8.884809e-48
MsG0080048462.01	MsG0380015101.01	0.823058	1.699118e-53	1.447479e-50
MsG0180000470.01	MsG0380015101.01	0.831701	1.437852e-55	1.572677e-52
MsG0180001381.01	MsG0380015101.01	0.805350	1.392943e-49	7.352703e-47
MsG0180003669.01	MsG0380015101.01	0.806734	7.125210e-50	3.896775e-47
MsG0180003686.01	MsG0380015101.01	0.802243	6.154775e-49	2.999956e-46
MsG0180003810.01	MsG0380015101.01	0.811644	6.313816e-51	3.929369e-48
MsG0180004295.01	MsG0380015101.01	0.818328	2.075735e-52	1.549068e-49
MsG0180004331.01	MsG0380015101.01	0.810483	1.127028e-50	6.801602e-48
MsG0180004372.01	MsG0380015101.01	0.802598	5.200400e-49	2.557794e-46
MsG0180004389.01	MsG0380015101.01	0.813461	2.529360e-51	1.652940e-48
MsG0180004465.01	MsG0380015101.01	0.816451	5.494408e-52	3.894297e-49
MsG0180004943.01	MsG0380015101.01	0.808058	3.731798e-50	2.112465e-47
MsG0180005050.01	MsG0380015101.01	0.821053	4.954392e-53	3.988060e-50
MsG0180005445.01	MsG0380015101.01	0.826781	2.246953e-54	2.127897e-51
MsG0180005708.01	MsG0380015101.01	0.807292	5.428686e-50	3.012243e-47
MsG0180005800.01	MsG0380015101.01	0.801407	9.138441e-49	4.360685e-46
MsG0180005842.01	MsG0380015101.01	0.829424	5.187497e-55	5.307145e-52
MsG0180005993.01	MsG0380015101.01	0.802532	5.364649e-49	2.634135e-46
MsG0180006155.01	MsG0380015101.01	0.801416	9.096224e-49	4.341582e-46
MsG0280006299.01	MsG0380015101.01	0.800722	1.261068e-48	5.914250e-46
MsG0280010698.01	MsG0380015101.01	0.818162	2.263332e-52	1.681311e-49
MsG0280010702.01	MsG0380015101.01	0.800396	1.469722e-48	6.836199e-46
MsG0280010722.01	MsG0380015101.01	0.818021	2.435818e-52	1.802421e-49
MsG0280010816.01	MsG0380015101.01	0.801618	8.270984e-49	3.967740e-46
MsG0380011609.01	MsG0380015101.01	0.807789	4.256517e-50	2.392621e-47
MsG0380012460.01	MsG0380015101.01	0.813357	2.666258e-51	1.737397e-48
MsG0380013176.01	MsG0380015101.01	0.829292	5.585614e-55	5.693418e-52
MsG0380014248.01	MsG0380015101.01	0.808796	2.597674e-50	1.499168e-47
MsG0380014537.01	MsG0380015101.01	0.829633	4.615562e-55	4.750852e-52
MsG0380014573.01	MsG0380015101.01	0.812694	3.727647e-51	2.386142e-48
MsG0380014701.01	MsG0380015101.01	0.807100	5.959961e-50	3.290413e-47
MsG0380015101.01	MsG0380015564.01	0.810982	8.791583e-51	5.377579e-48
MsG0380015101.01	MsG0380016517.01	0.822359	2.471506e-53	2.064100e-50
MsG0380015101.01	MsG0380016970.01	0.800541	1.373172e-48	6.410527e-46
MsG0380015101.01	MsG0380017040.01	0.806163	9.398471e-50	5.065818e-47
MsG0380015101.01	MsG0380017140.01	0.811660	6.266214e-51	3.901316e-48
MsG0380015101.01	MsG0380017375.01	0.801168	1.022472e-48	4.849878e-46
MsG0380015101.01	MsG0480018236.01	0.811518	6.726642e-51	4.172744e-48
MsG0380015101.01	MsG0480018465.01	0.821150	4.705964e-53	3.798013e-50
MsG0380015101.01	MsG0480018778.01	0.806414	8.322605e-50	4.514402e-47
MsG0380015101.01	MsG0480020447.01	0.815992	6.957543e-52	4.870231e-49
MsG0380015101.01	MsG0480021215.01	0.834373	3.112508e-56	3.686690e-53
MsG0380015101.01	MsG0480021409.01	0.830501	2.834309e-55	2.991459e-52
MsG0380015101.01	MsG0480021426.01	0.806707	7.218554e-50	3.945001e-47
MsG0380015101.01	MsG0480021452.01	0.806426	8.274948e-50	4.490020e-47
MsG0380015101.01	MsG0480021465.01	0.818556	1.842729e-52	1.383855e-49
MsG0380015101.01	MsG0480021489.01	0.802240	6.162573e-49	3.003533e-46
MsG0380015101.01	MsG0480021778.01	0.805652	1.203820e-49	6.404039e-47
MsG0380015101.01	MsG0480021819.01	0.802144	6.449392e-49	3.135619e-46
MsG0380015101.01	MsG0480022068.01	0.804349	2.253961e-49	1.159502e-46
MsG0380015101.01	MsG0480022467.01	0.808785	2.610591e-50	1.506214e-47
MsG0380015101.01	MsG0480022985.01	0.802696	4.962666e-49	2.447055e-46
MsG0380015101.01	MsG0480023600.01	0.820391	7.030089e-53	5.555760e-50
MsG0380015101.01	MsG0480023873.01	0.809180	2.149607e-50	1.253445e-47
MsG0380015101.01	MsG0580024251.01	0.802343	5.867706e-49	2.867436e-46
MsG0380015101.01	MsG0580024305.01	0.806136	9.522679e-50	5.129062e-47
MsG0380015101.01	MsG0580024418.01	0.823272	1.514888e-53	1.298218e-50
MsG0380015101.01	MsG0580024733.01	0.807890	4.052158e-50	2.283613e-47
MsG0380015101.01	MsG0580024781.01	0.813473	2.514413e-51	1.643638e-48
MsG0380015101.01	MsG0580025022.01	0.808050	3.746693e-50	2.120453e-47
MsG0380015101.01	MsG0580025758.01	0.808894	2.474994e-50	1.432076e-47
MsG0380015101.01	MsG0580026086.01	0.825724	4.011224e-54	3.686081e-51
MsG0380015101.01	MsG0580027152.01	0.806790	6.933294e-50	3.797266e-47
MsG0380015101.01	MsG0580027650.01	0.804413	2.185835e-49	1.126275e-46
MsG0380015101.01	MsG0580027745.01	0.801125	1.043411e-48	4.943940e-46
MsG0380015101.01	MsG0580027947.01	0.810034	1.408788e-50	8.402978e-48
MsG0380015101.01	MsG0580029762.01	0.814629	1.397515e-51	9.425894e-49
MsG0380015101.01	MsG0580029926.01	0.806228	9.108963e-50	4.917945e-47
MsG0380015101.01	MsG0680030316.01	0.805478	1.309263e-49	6.933772e-47
MsG0380015101.01	MsG0680031506.01	0.816714	4.796757e-52	3.424627e-49
MsG0380015101.01	MsG0680031946.01	0.801948	7.077250e-49	3.423657e-46
MsG0380015101.01	MsG0680035340.01	0.822097	2.842761e-53	2.356170e-50
MsG0380015101.01	MsG0680035444.01	0.819814	9.531456e-53	7.412413e-50
MsG0380015101.01	MsG0680035573.01	0.817434	3.303781e-52	2.405819e-49
MsG0380015101.01	MsG0780036430.01	0.801556	8.516170e-49	4.079088e-46
MsG0380015101.01	MsG0780037141.01	0.817353	3.446367e-52	2.503909e-49
MsG0380015101.01	MsG0780039170.01	0.810450	1.145528e-50	6.907180e-48
MsG0380015101.01	MsG0780039443.01	0.802397	5.719478e-49	2.798901e-46
MsG0380015101.01	MsG0780039896.01	0.802248	6.140097e-49	2.993229e-46
MsG0380015101.01	MsG0780040044.01	0.828452	8.920931e-55	8.870973e-52
MsG0380015101.01	MsG0780040176.01	0.808507	2.993635e-50	1.714784e-47
MsG0380015101.01	MsG0780040262.01	0.800431	1.445614e-48	6.730183e-46
MsG0380015101.01	MsG0780041065.01	0.804658	1.943933e-49	1.007991e-46
MsG0380015101.01	MsG0880043509.01	0.800049	1.729658e-48	7.974477e-46
MsG0380015101.01	MsG0880043804.01	0.822100	2.837034e-53	2.351695e-50
MsG0380015101.01	MsG0880045111.01	0.817409	3.347600e-52	2.436015e-49
MsG0380015101.01	MsG0880045639.01	0.818201	2.217761e-52	1.649257e-49
MsG0380015101.01	MsG0880045736.01	0.844481	7.361334e-59	1.190059e-55
MsG0380015101.01	MsG0880045937.01	0.820607	6.273799e-53	4.987028e-50
MsG0380015101.01	MsG0880047472.01	0.811747	5.998642e-51	3.743565e-48
MsG0380015101.01	MsG0880047764.01	0.807985	3.867885e-50	2.185308e-47
MsG0280006491.01	MsG0380015101.01	0.806400	8.378001e-50	4.542877e-47
MsG0280006770.01	MsG0380015101.01	0.805911	1.061840e-49	5.686540e-47
MsG0280007088.01	MsG0380015101.01	0.807229	5.598067e-50	3.101143e-47
MsG0280007564.01	MsG0380015101.01	0.818998	1.462434e-52	1.111886e-49
MsG0280007727.01	MsG0380015101.01	0.810570	1.079351e-50	6.528939e-48
MsG0280007745.01	MsG0380015101.01	0.811379	7.211643e-51	4.457008e-48
MsG0280007955.01	MsG0380015101.01	0.823934	1.060071e-53	9.256677e-51
MsG0280008112.01	MsG0380015101.01	0.808013	3.814407e-50	2.156706e-47
MsG0280009748.01	MsG0380015101.01	0.804353	2.249614e-49	1.157398e-46
MsG0280010233.01	MsG0380015101.01	0.812187	4.809047e-51	3.037092e-48
MsG0280010443.01	MsG0380015101.01	0.809701	1.661145e-50	9.821752e-48

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0380015101.01.T01	MTR_3g062850	45.161	155	67	4	8	154	149	293	3.83e-25	100

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Find 85 sgRNAs with CRISPR-Local

Find 334 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CCTCTAAGTGATTCGAATTT+TGG	0.069894	3:+65237918	None:intergenic
CTTTATATCCTTTCCTGATA+TGG	0.141349	3:+65233530	None:intergenic
CTCCTTGTGTTGGCGACATC+TGG	0.175752	3:+65237455	None:intergenic
GCGACATCTGGGACCGCAAC+TGG	0.216020	3:+65237467	None:intergenic
AATAGACAGGGATGGGATTA+TGG	0.229536	3:-65237750	MsG0380015101.01.T01:intron
CACATTTGGGTAAAGCTTCT+TGG	0.253980	3:+65234017	None:intergenic
GGACAGTCCGACAATTATTA+AGG	0.278402	3:-65237879	MsG0380015101.01.T01:CDS
CCAAAGCAAAACTGCTTCTT+CGG	0.293791	3:-65235741	MsG0380015101.01.T01:CDS
CCTTATATTGTGTAACTAAA+AGG	0.296620	3:-65233319	MsG0380015101.01.T01:three_prime_UTR
CCCACCTCTGGTTTATAATT+CGG	0.299001	3:-65233972	MsG0380015101.01.T01:intron
GGCATTTCATCTCCCATATC+AGG	0.332511	3:-65233543	MsG0380015101.01.T01:three_prime_UTR
AAACTTTATAGTTCCACATT+TGG	0.339748	3:+65234003	None:intergenic
TGGCATCTGAAGACATTGAT+AGG	0.340914	3:+65233594	None:intergenic
AACTTTATAGTTCCACATTT+GGG	0.342751	3:+65234004	None:intergenic
TTTATATCCTTTCCTGATAT+GGG	0.343848	3:+65233531	None:intergenic
TTAGAATCTAGGGGCATAAT+AGG	0.344625	3:+65233635	None:intergenic
TGAAGACTGTCAAGCTGATC+TGG	0.376977	3:-65235714	MsG0380015101.01.T01:CDS
CAGACGGAGTATTAGAATCT+AGG	0.380243	3:+65233624	None:intergenic
AGGAAACCCGTAAACATATC+AGG	0.396756	3:-65237551	MsG0380015101.01.T01:CDS
CGACATCTGGGACCGCAACT+GGG	0.398383	3:+65237468	None:intergenic
CCAAAATTCGAATCACTTAG+AGG	0.398799	3:-65237918	MsG0380015101.01.T01:CDS
ACTCTGTCCTACAAAGTTCC+AGG	0.409270	3:+65237522	None:intergenic
ATAGACAGGGATGGGATTAT+GGG	0.416396	3:-65237749	MsG0380015101.01.T01:intron
ATTCTGATCCATGCCAAGAT+TGG	0.419944	3:+65233574	None:intergenic
CAAAGCAAAACTGCTTCTTC+GGG	0.430445	3:-65235740	MsG0380015101.01.T01:CDS
TAGGACTTCAGATATCATTC+AGG	0.441846	3:-65237571	MsG0380015101.01.T01:CDS
GACAGTCCGACAATTATTAA+GGG	0.445266	3:-65237878	MsG0380015101.01.T01:CDS
GTTTGAGTTTATCCCACCTC+TGG	0.445698	3:-65233984	MsG0380015101.01.T01:three_prime_UTR
ACATCTTCTCTTACTCATAT+CGG	0.454109	3:-65237842	MsG0380015101.01.T01:CDS
TAGAGGAGGGCAATCTCAAA+AGG	0.454947	3:-65237901	MsG0380015101.01.T01:CDS
GAACTTTGTAGGACAGAGTC+AGG	0.466732	3:-65237518	MsG0380015101.01.T01:CDS
AGTGTCTTCAAAGGGGAAGC+AGG	0.467771	3:+65234049	None:intergenic
TCCTTGTGTTGGCGACATCT+GGG	0.472058	3:+65237456	None:intergenic
TCTAATCCCTTAATAATTGT+CGG	0.472952	3:+65237872	None:intergenic
AAGAGCATCTCTTCTATAGC+TGG	0.472982	3:-65233465	MsG0380015101.01.T01:three_prime_UTR
ATGTCTTCAGATGCCAATCT+TGG	0.479100	3:-65233587	MsG0380015101.01.T01:three_prime_UTR
TCTTTACGAGTGTCTTCAAA+GGG	0.482785	3:+65234041	None:intergenic
GCTAGTGTCATTCTCTGTGC+AGG	0.498259	3:-65237942	MsG0380015101.01.T01:CDS
AGACGGAGTATTAGAATCTA+GGG	0.499068	3:+65233625	None:intergenic
TCTAGGGGCATAATAGGCAC+TGG	0.508498	3:+65233641	None:intergenic
CTAGGGGCATAATAGGCACT+GGG	0.514055	3:+65233642	None:intergenic
CATCTCTTCTATAGCTGGAA+AGG	0.517760	3:-65233460	MsG0380015101.01.T01:three_prime_UTR
TCTAGCTGAGAAAGCTCGCT+TGG	0.528045	3:-65233804	MsG0380015101.01.T01:three_prime_UTR
ATATAAATAACAGATCATAA+AGG	0.529068	3:+65233392	None:intergenic
GATTTCGTTGCAGGTTGCAA+TGG	0.540974	3:-65235773	MsG0380015101.01.T01:intron
AGTTCTTGATCTCCTTGTGT+TGG	0.542300	3:+65237445	None:intergenic
ATATTGTGTAACTAAAAGGA+AGG	0.549285	3:-65233315	MsG0380015101.01.T01:three_prime_UTR
ACCGAATTATAAACCAGAGG+TGG	0.553008	3:+65233971	None:intergenic
ATATCATCAACTTACGATGC+AGG	0.555351	3:-65233726	MsG0380015101.01.T01:three_prime_UTR
TCCCAGATGTCGCCAACACA+AGG	0.557867	3:-65237457	MsG0380015101.01.T01:CDS
TTCTTTACGAGTGTCTTCAA+AGG	0.568126	3:+65234040	None:intergenic
AGCTGATCTGGCATTTGCAA+AGG	0.572391	3:-65235702	MsG0380015101.01.T01:CDS
GAGTTCTGAGGTGATTGTAA+AGG	0.573419	3:-65233508	MsG0380015101.01.T01:three_prime_UTR
GGCATCTGAAGACATTGATA+GGG	0.575152	3:+65233595	None:intergenic
CTCGTGAGAATCGCTTTCTG+AGG	0.578990	3:-65233760	MsG0380015101.01.T01:three_prime_UTR
TGAGAATCGCTTTCTGAGGG+AGG	0.579459	3:-65233756	MsG0380015101.01.T01:three_prime_UTR
GTTGCAGGTTGCAATGGCAA+TGG	0.581158	3:-65235767	MsG0380015101.01.T01:intron
TTCATCTCCCATATCAGGAA+AGG	0.581530	3:-65233538	MsG0380015101.01.T01:three_prime_UTR
AGAGGAGGGCAATCTCAAAA+GGG	0.582424	3:-65237900	MsG0380015101.01.T01:CDS
GACATCTGGGACCGCAACTG+GGG	0.584957	3:+65237469	None:intergenic
TTCAGATGCCAATCTTGGCA+TGG	0.585803	3:-65233582	MsG0380015101.01.T01:three_prime_UTR
TGAAGACATTGATAGGGATG+TGG	0.588765	3:+65233601	None:intergenic
AGATCAAGAACTTCAGCTGA+AGG	0.589254	3:-65237434	MsG0380015101.01.T01:CDS
AATTCGAATCACTTAGAGGA+GGG	0.593525	3:-65237914	MsG0380015101.01.T01:CDS
TCGTGAGAATCGCTTTCTGA+GGG	0.604235	3:-65233759	MsG0380015101.01.T01:three_prime_UTR
GGTTCTTGCAACGTGTAGAA+TGG	0.606195	3:+65237490	None:intergenic
CAAGAAGCTTTACCCAAATG+TGG	0.608481	3:-65234016	MsG0380015101.01.T01:three_prime_UTR
CCGAATTATAAACCAGAGGT+GGG	0.608660	3:+65233972	None:intergenic
TATTGTGTAACTAAAAGGAA+GGG	0.608746	3:-65233314	MsG0380015101.01.T01:three_prime_UTR
GTGTCTTCAAAGGGGAAGCA+GGG	0.611404	3:+65234050	None:intergenic
CAAAGGGGAAGCAGGGAGAG+TGG	0.623575	3:+65234057	None:intergenic
ATTGATAGGGATGTGGCAGA+CGG	0.626543	3:+65233608	None:intergenic
GGATCGATGTGCTCAACTAG+AGG	0.635385	3:-65235681	MsG0380015101.01.T01:CDS
TACTCATATCGGTGGCACCA+TGG	0.637815	3:-65237831	MsG0380015101.01.T01:intron
AAAGGATATAAAGAGTTCTG+AGG	0.642104	3:-65233520	MsG0380015101.01.T01:three_prime_UTR
CGTTGCAAGAACCCCAGTTG+CGG	0.653525	3:-65237480	MsG0380015101.01.T01:CDS
CATGGATCAGAATTAACAAG+AGG	0.656006	3:-65233564	MsG0380015101.01.T01:three_prime_UTR
AAATTCGAATCACTTAGAGG+AGG	0.665089	3:-65237915	MsG0380015101.01.T01:CDS
TCTTCTCTTACTCATATCGG+TGG	0.669381	3:-65237839	MsG0380015101.01.T01:CDS
AGGGGCATAATAGGCACTGG+GGG	0.692815	3:+65233644	None:intergenic
GACGGAGTATTAGAATCTAG+GGG	0.693516	3:+65233626	None:intergenic
AACACCGAATTATAAACCAG+AGG	0.728295	3:+65233968	None:intergenic
CTTTACGAGTGTCTTCAAAG+GGG	0.738222	3:+65234042	None:intergenic
GTACTTAGACGAGAGCAATG+AGG	0.740298	3:-65233696	MsG0380015101.01.T01:three_prime_UTR
TAGGGGCATAATAGGCACTG+GGG	0.741164	3:+65233643	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAGACAAAGATAAAAATAA+TGG	+	Chr3:65234773-65234792	None:intergenic	15.0%
!!	ATAAGTAAAAAACTTATAAG+TGG	+	Chr3:65233461-65233480	None:intergenic	15.0%
!!	ATATAAATAACAGATCATAA+AGG	+	Chr3:65237844-65237863	None:intergenic	15.0%
!!!	ATGTTTTCTATAATATCATA+TGG	-	Chr3:65237000-65237019	MsG0380015101.01.T01:intron	15.0%
!!!	ATTTTAAAAACAAACAACAT+AGG	+	Chr3:65233924-65233943	None:intergenic	15.0%
!!!	CAAATGTTATTTGTAATTTT+AGG	+	Chr3:65234802-65234821	None:intergenic	15.0%
!!!	TAATTACAAAATACCTTTTT+TGG	-	Chr3:65235834-65235853	MsG0380015101.01.T01:intron	15.0%
!!!	TCATAAAATACAGAAAATTT+TGG	+	Chr3:65237369-65237388	None:intergenic	15.0%
!!!	TTTTAAAAACAAACAACATA+GGG	+	Chr3:65233923-65233942	None:intergenic	15.0%
!!	AAATTAGAGTTGAGAAAAAA+GGG	+	Chr3:65237131-65237150	None:intergenic	20.0%
!!	AAGAATTGTGATACTATTAA+AGG	-	Chr3:65234044-65234063	MsG0380015101.01.T01:three_prime_UTR	20.0%
!!	AAGTACTATATATCCAAAAA+AGG	+	Chr3:65235850-65235869	None:intergenic	20.0%
!!	AATTGAACTCTGAATATTTA+AGG	+	Chr3:65236512-65236531	None:intergenic	20.0%
!!	ACTAGTTAACACATATTATA+TGG	-	Chr3:65237035-65237054	MsG0380015101.01.T01:intron	20.0%
!!	AGATATTTACAGATGATTAT+AGG	+	Chr3:65235094-65235113	None:intergenic	20.0%
!!	ATGATTGTTGTCTATTAAAT+TGG	-	Chr3:65236096-65236115	MsG0380015101.01.T01:intron	20.0%
!!	TATTTGCTTCATAGATAAAT+CGG	+	Chr3:65234131-65234150	None:intergenic	20.0%
!!	TGAAAACAAGAAAATGAAAA+TGG	-	Chr3:65236427-65236446	MsG0380015101.01.T01:intron	20.0%
!!	TGCAAATGAAATTTAGATTA+AGG	+	Chr3:65236981-65237000	None:intergenic	20.0%
!!	TTTAATATATGCATTTCAAG+AGG	+	Chr3:65234227-65234246	None:intergenic	20.0%
!!!	ATATATTTTTGCTTTAGATG+AGG	+	Chr3:65234936-65234955	None:intergenic	20.0%
!!!	TAATAATTTGGTGTTAGTTT+AGG	-	Chr3:65235200-65235219	MsG0380015101.01.T01:intron	20.0%
!!!	TAATTTTTGACACAAGTAAT+CGG	-	Chr3:65234958-65234977	MsG0380015101.01.T01:intron	20.0%
!!!	TTGTTTTTTACAGTTTCAAT+GGG	-	Chr3:65234545-65234564	MsG0380015101.01.T01:intron	20.0%
!	AAAACACATGCAAAAATTTG+AGG	+	Chr3:65233954-65233973	None:intergenic	25.0%
!	AAACTTTATAGTTCCACATT+TGG	+	Chr3:65237233-65237252	None:intergenic	25.0%
!	AACTTTATAGTTCCACATTT+GGG	+	Chr3:65237232-65237251	None:intergenic	25.0%
!	ACTCAGAAGTTCAAAATAAT+AGG	+	Chr3:65233539-65233558	None:intergenic	25.0%
!	ATATTGTGTAACTAAAAGGA+AGG	-	Chr3:65237918-65237937	MsG0380015101.01.T01:CDS	25.0%
!	ATGAAGCAAATACATAGATA+TGG	-	Chr3:65234139-65234158	MsG0380015101.01.T01:intron	25.0%
!	CCTTATATTGTGTAACTAAA+AGG	-	Chr3:65237914-65237933	MsG0380015101.01.T01:CDS	25.0%
!	GAAATTAGAGTTGAGAAAAA+AGG	+	Chr3:65237132-65237151	None:intergenic	25.0%
!	GATATATTCAATGAAACTAG+AGG	+	Chr3:65235005-65235024	None:intergenic	25.0%
!	GTTGTCTATTAAATTGGTAT+GGG	-	Chr3:65236102-65236121	MsG0380015101.01.T01:intron	25.0%
!	TAATCATCTGTAAATATCTG+AGG	-	Chr3:65235095-65235114	MsG0380015101.01.T01:intron	25.0%
!	TATTGTGTAACTAAAAGGAA+GGG	-	Chr3:65237919-65237938	MsG0380015101.01.T01:CDS	25.0%
!	TCTAATCCCTTAATAATTGT+CGG	+	Chr3:65233364-65233383	None:intergenic	25.0%
!	TGTTGTCTATTAAATTGGTA+TGG	-	Chr3:65236101-65236120	MsG0380015101.01.T01:intron	25.0%
!	TTTATATCCTTTCCTGATAT+GGG	+	Chr3:65237705-65237724	None:intergenic	25.0%
!!	AGAAAATGAAAATGGCATTT+TGG	-	Chr3:65236435-65236454	MsG0380015101.01.T01:intron	25.0%
!!	CAAAATAAACCTGTTTCTTA+GGG	+	Chr3:65235382-65235401	None:intergenic	25.0%
!!	GTTTTACAATTGTTGAGAAT+AGG	-	Chr3:65233643-65233662	MsG0380015101.01.T01:three_prime_UTR	25.0%
!!	TCAAAATAAACCTGTTTCTT+AGG	+	Chr3:65235383-65235402	None:intergenic	25.0%
!!	TCTAATTTTCTGATGACAAA+GGG	-	Chr3:65234898-65234917	MsG0380015101.01.T01:intron	25.0%
!!	TTTTACTTATGCAATAGACA+GGG	-	Chr3:65233471-65233490	MsG0380015101.01.T01:three_prime_UTR	25.0%
!!	TTTTTACGGCTCTTATATTT+TGG	-	Chr3:65235247-65235266	MsG0380015101.01.T01:intron	25.0%
!!	TTTTTACTTATGCAATAGAC+AGG	-	Chr3:65233470-65233489	MsG0380015101.01.T01:three_prime_UTR	25.0%
!!!	AGAGTTCAATTTTTAAAGCT+GGG	-	Chr3:65236521-65236540	MsG0380015101.01.T01:intron	25.0%
!!!	CCTTTTAGTTACACAATATA+AGG	+	Chr3:65237917-65237936	None:intergenic	25.0%
!!!	CTATTTCTATACATGGATTT+TGG	-	Chr3:65236691-65236710	MsG0380015101.01.T01:intron	25.0%
!!!	CTTGTTTTTTACAGTTTCAA+TGG	-	Chr3:65234544-65234563	MsG0380015101.01.T01:intron	25.0%
!!!	GTCAAGATAACATGATTTTT+TGG	+	Chr3:65236335-65236354	None:intergenic	25.0%
!!!	GTTTTAAACATACAGCAATA+TGG	+	Chr3:65234723-65234742	None:intergenic	25.0%
!!!	TCATGGTTTTTTTAAGGTAA+CGG	-	Chr3:65235317-65235336	MsG0380015101.01.T01:intron	25.0%
!!!	TCTTTCTCATGGTTTTTTTA+AGG	-	Chr3:65235311-65235330	MsG0380015101.01.T01:intron	25.0%
!!!	TGTTTTTTACAGTTTCAATG+GGG	-	Chr3:65234546-65234565	MsG0380015101.01.T01:intron	25.0%
!!!	TTTTTGAAAACAACACAATG+TGG	+	Chr3:65237322-65237341	None:intergenic	25.0%
	AAAACCAAATGTCAAAGAGT+TGG	-	Chr3:65236227-65236246	MsG0380015101.01.T01:intron	30.0%
	AAAGGATATAAAGAGTTCTG+AGG	-	Chr3:65237713-65237732	MsG0380015101.01.T01:intron	30.0%
	AAGTCCAATAGAAATGATGT+TGG	-	Chr3:65236652-65236671	MsG0380015101.01.T01:intron	30.0%
	AATAGAGGTTAACATAGGAA+GGG	+	Chr3:65237095-65237114	None:intergenic	30.0%
	ACAATGAAGAGGGAATAAAT+AGG	-	Chr3:65234373-65234392	MsG0380015101.01.T01:intron	30.0%
	ACATCTTCTCTTACTCATAT+CGG	-	Chr3:65233391-65233410	MsG0380015101.01.T01:three_prime_UTR	30.0%
	ACCAAGAATACTTTAAACTG+TGG	+	Chr3:65236071-65236090	None:intergenic	30.0%
	AGAAAGTCTAATAAATAGGG+AGG	-	Chr3:65234487-65234506	MsG0380015101.01.T01:intron	30.0%
	AGAGAAGTCAACAAACAAAA+AGG	+	Chr3:65235646-65235665	None:intergenic	30.0%
	AGAGTAGTAAATATTGTGCT+GGG	+	Chr3:65234881-65234900	None:intergenic	30.0%
	AGATTGAACTAGTGATTAGA+AGG	+	Chr3:65235051-65235070	None:intergenic	30.0%
	AGGGAAATTAATAGAGGTAA+TGG	-	Chr3:65234463-65234482	MsG0380015101.01.T01:intron	30.0%
	ATACCAAATCATCATCATCT+TGG	+	Chr3:65235619-65235638	None:intergenic	30.0%
	ATCTGTGTAAAACAAACTGA+AGG	+	Chr3:65234688-65234707	None:intergenic	30.0%
	CAAACAATAGAGGTTAACAT+AGG	+	Chr3:65237100-65237119	None:intergenic	30.0%
	CATATGTCATGTGTAAAGAA+AGG	+	Chr3:65234839-65234858	None:intergenic	30.0%
	CATGAATCATTCCTATATTG+AGG	+	Chr3:65234104-65234123	None:intergenic	30.0%
	CGATAGTTGTTTATATCACA+GGG	+	Chr3:65235760-65235779	None:intergenic	30.0%
	CTCAATATAGGAATGATTCA+TGG	-	Chr3:65234102-65234121	MsG0380015101.01.T01:intron	30.0%
	CTTTATATCCTTTCCTGATA+TGG	+	Chr3:65237706-65237725	None:intergenic	30.0%
	GAATAAATAGGTAGTGAAGA+GGG	-	Chr3:65234385-65234404	MsG0380015101.01.T01:intron	30.0%
	GAGTGATGGTACTAATAATT+TGG	-	Chr3:65235188-65235207	MsG0380015101.01.T01:intron	30.0%
	GCTAATAAATAGAGAGGTAA+TGG	-	Chr3:65234436-65234455	MsG0380015101.01.T01:intron	30.0%
	GGCAGAAAGTCTAATAAATA+GGG	-	Chr3:65234484-65234503	MsG0380015101.01.T01:intron	30.0%
	TAGAGTAGTAAATATTGTGC+TGG	+	Chr3:65234882-65234901	None:intergenic	30.0%
	TATTCCAGAAGAAAGAAAGT+GGG	-	Chr3:65234333-65234352	MsG0380015101.01.T01:intron	30.0%
	TCCAAAAGACTAGATGTATT+TGG	-	Chr3:65237066-65237085	MsG0380015101.01.T01:intron	30.0%
	TCTATACAGAGCTAATACAA+AGG	+	Chr3:65236820-65236839	None:intergenic	30.0%
	TCTTACTACTCAAAGAGAAT+AGG	+	Chr3:65236196-65236215	None:intergenic	30.0%
	TGGCAGAAAGTCTAATAAAT+AGG	-	Chr3:65234483-65234502	MsG0380015101.01.T01:intron	30.0%
	TTATTCCAGAAGAAAGAAAG+TGG	-	Chr3:65234332-65234351	MsG0380015101.01.T01:intron	30.0%
!	ATATTTAAGGCCTATTTGGT+TGG	+	Chr3:65236499-65236518	None:intergenic	30.0%
!	CATTCTGCCTATATTGTTTT+GGG	-	Chr3:65234659-65234678	MsG0380015101.01.T01:intron	30.0%
!	CTCTAATTTTCTGATGACAA+AGG	-	Chr3:65234897-65234916	MsG0380015101.01.T01:intron	30.0%
!	CTGAATATTTAAGGCCTATT+TGG	+	Chr3:65236503-65236522	None:intergenic	30.0%
!	CTTTTTCCTGATATGTTTAC+GGG	+	Chr3:65233691-65233710	None:intergenic	30.0%
!	TCATTCTGCCTATATTGTTT+TGG	-	Chr3:65234658-65234677	MsG0380015101.01.T01:intron	30.0%
!	TCATTTTCTTGTCTTTCTCA+TGG	-	Chr3:65235300-65235319	MsG0380015101.01.T01:intron	30.0%
!	TCCACAGTTTAAAGTATTCT+TGG	-	Chr3:65236067-65236086	MsG0380015101.01.T01:intron	30.0%
!	TTGCTCGTTTTATATATCGT+GGG	-	Chr3:65237865-65237884	MsG0380015101.01.T01:CDS	30.0%
!!	ATAAATAGAGAGGTAATGGA+AGG	-	Chr3:65234440-65234459	MsG0380015101.01.T01:intron	30.0%
!!	ATTCTGCCTATATTGTTTTG+GGG	-	Chr3:65234660-65234679	MsG0380015101.01.T01:intron	30.0%
!!	GCTTTTTCCTGATATGTTTA+CGG	+	Chr3:65233692-65233711	None:intergenic	30.0%
!!	GGTCAAACTATTTCTATACA+TGG	-	Chr3:65236684-65236703	MsG0380015101.01.T01:intron	30.0%
!!	GTCAATTGATTTGGTTATTC+AGG	-	Chr3:65237290-65237309	MsG0380015101.01.T01:intron	30.0%
!!	TCCAAATACATCTAGTCTTT+TGG	+	Chr3:65237070-65237089	None:intergenic	30.0%
!!	TTTCAAGAGGTACTTATGTT+TGG	+	Chr3:65234214-65234233	None:intergenic	30.0%
!!	TTTTGGTAGTTAGTGAAACA+AGG	-	Chr3:65236452-65236471	MsG0380015101.01.T01:intron	30.0%
!!!	CAGAGTTCAATTTTTAAAGC+TGG	-	Chr3:65236520-65236539	MsG0380015101.01.T01:intron	30.0%
!!!	CAGTTTGTTTTACACAGATA+TGG	-	Chr3:65234689-65234708	MsG0380015101.01.T01:intron	30.0%
!!!	CTGTGTATCACTTTTTAATG+TGG	-	Chr3:65233845-65233864	MsG0380015101.01.T01:intron	30.0%
!!!	GAGTTCAATTTTTAAAGCTG+GGG	-	Chr3:65236522-65236541	MsG0380015101.01.T01:intron	30.0%
!!!	TCACTCTCACTCTTTTTTTA+CGG	-	Chr3:65235233-65235252	MsG0380015101.01.T01:intron	30.0%
!!!	TTATACTGCTGTTTTTGTGT+TGG	-	Chr3:65233981-65234000	MsG0380015101.01.T01:three_prime_UTR	30.0%
	AAACATATCAGGAAAAAGCC+TGG	-	Chr3:65233693-65233712	MsG0380015101.01.T01:three_prime_UTR	35.0%
	AAATTCGAATCACTTAGAGG+AGG	-	Chr3:65233318-65233337	MsG0380015101.01.T01:three_prime_UTR	35.0%
	AACACCGAATTATAAACCAG+AGG	+	Chr3:65237268-65237287	None:intergenic	35.0%
	AAGAGGGAGGGAATAAATAA+AGG	-	Chr3:65234401-65234420	MsG0380015101.01.T01:intron	35.0%
	AAGCATATCCTTATGGAAGA+AGG	+	Chr3:65233582-65233601	None:intergenic	35.0%
	AAGGAACCCCAAAACAATAT+AGG	+	Chr3:65234669-65234688	None:intergenic	35.0%
	AATGTGTTGTCAAACCAAAG+AGG	+	Chr3:65236271-65236290	None:intergenic	35.0%
	AATTCGAATCACTTAGAGGA+GGG	-	Chr3:65233319-65233338	MsG0380015101.01.T01:three_prime_UTR	35.0%
	AGAGAATCAGACAATGAAGA+GGG	-	Chr3:65234363-65234382	MsG0380015101.01.T01:intron	35.0%
	AGTAACCACAGCAAAAGTAA+TGG	+	Chr3:65235815-65235834	None:intergenic	35.0%
	AGTACATGTGTGGTTAAGTA+CGG	-	Chr3:65233872-65233891	MsG0380015101.01.T01:intron	35.0%
	ATATCATCAACTTACGATGC+AGG	-	Chr3:65237507-65237526	MsG0380015101.01.T01:CDS	35.0%
	ATGGCCAACATCATTTCTAT+TGG	+	Chr3:65236659-65236678	None:intergenic	35.0%
	CAAATGTCAAAGAGTTGGAT+GGG	-	Chr3:65236232-65236251	MsG0380015101.01.T01:intron	35.0%
	CAATAGAGGTTAACATAGGA+AGG	+	Chr3:65237096-65237115	None:intergenic	35.0%
	CAGGAAGCTAATAAATAGAG+AGG	-	Chr3:65234430-65234449	MsG0380015101.01.T01:intron	35.0%
	CATGGATCAGAATTAACAAG+AGG	-	Chr3:65237669-65237688	MsG0380015101.01.T01:intron	35.0%
	CCAAAATTCGAATCACTTAG+AGG	-	Chr3:65233315-65233334	MsG0380015101.01.T01:three_prime_UTR	35.0%
	GAAACAGAGAAGCCAATTTA+GGG	+	Chr3:65236558-65236577	None:intergenic	35.0%
	GAAATAGTTTGACCATCTCA+TGG	+	Chr3:65236678-65236697	None:intergenic	35.0%
	GACAGTCCGACAATTATTAA+GGG	-	Chr3:65233355-65233374	MsG0380015101.01.T01:three_prime_UTR	35.0%
	GAGGGAATAAATAAAGGTAG+TGG	-	Chr3:65234407-65234426	MsG0380015101.01.T01:intron	35.0%
	GATCACAAAGCATATCCTTA+TGG	+	Chr3:65233589-65233608	None:intergenic	35.0%
	GCGATAGTTGTTTATATCAC+AGG	+	Chr3:65235761-65235780	None:intergenic	35.0%
	GGAATAAACTTCCAAGTTAC+AGG	+	Chr3:65234319-65234338	None:intergenic	35.0%
	GGAATAAATAGGTAGTGAAG+AGG	-	Chr3:65234384-65234403	MsG0380015101.01.T01:intron	35.0%
	GGAGTAAGTACAAACAATAG+AGG	+	Chr3:65237110-65237129	None:intergenic	35.0%
	GGTTTGACTATACCCTAAAT+TGG	-	Chr3:65236543-65236562	MsG0380015101.01.T01:intron	35.0%
	GTAAAAAAAGAGTGAGAGTG+AGG	+	Chr3:65235234-65235253	None:intergenic	35.0%
	GTCTATTAAATTGGTATGGG+TGG	-	Chr3:65236105-65236124	MsG0380015101.01.T01:intron	35.0%
	TAGGACTTCAGATATCATTC+AGG	-	Chr3:65233662-65233681	MsG0380015101.01.T01:three_prime_UTR	35.0%
	TATAAGCAGTTACACCTTCA+CGG	+	Chr3:65235896-65235915	None:intergenic	35.0%
	TCACAAACTTCAGAGAATCA+TGG	+	Chr3:65236783-65236802	None:intergenic	35.0%
	TCTAATAAATAGGGAGGTAG+TGG	-	Chr3:65234493-65234512	MsG0380015101.01.T01:intron	35.0%
	TCTATCAAAGGCCTCAATAT+AGG	-	Chr3:65234090-65234109	MsG0380015101.01.T01:intron	35.0%
	TCTATCTCACGAAAAGACAA+GGG	+	Chr3:65235687-65235706	None:intergenic	35.0%
	TCTGTGTTTGTGATAGATAC+CGG	-	Chr3:65234249-65234268	MsG0380015101.01.T01:intron	35.0%
	TCTTTACGAGTGTCTTCAAA+GGG	+	Chr3:65237195-65237214	None:intergenic	35.0%
	TGAAACAGAGAAGCCAATTT+AGG	+	Chr3:65236559-65236578	None:intergenic	35.0%
	TTAGAAGGTCAATAGATAGC+TGG	+	Chr3:65235036-65235055	None:intergenic	35.0%
	TTATGGGAATGTGTTACAGT+AGG	-	Chr3:65233500-65233519	MsG0380015101.01.T01:three_prime_UTR	35.0%
	TTCTATCTCACGAAAAGACA+AGG	+	Chr3:65235688-65235707	None:intergenic	35.0%
	TTCTTTACGAGTGTCTTCAA+AGG	+	Chr3:65237196-65237215	None:intergenic	35.0%
	TTTCGTGAGATAGAAGTTGA+TGG	-	Chr3:65235693-65235712	MsG0380015101.01.T01:CDS	35.0%
	TTTGGTGAAATGAGTAGTGT+TGG	+	Chr3:65237351-65237370	None:intergenic	35.0%
!	AGACGGAGTATTAGAATCTA+GGG	+	Chr3:65237611-65237630	None:intergenic	35.0%
!	ATGTGGTAAAAGTACATGTG+TGG	-	Chr3:65233862-65233881	MsG0380015101.01.T01:intron	35.0%
!	CCTCTAAGTGATTCGAATTT+TGG	+	Chr3:65233318-65233337	None:intergenic	35.0%
!	GAATAAATAAAGGTAGTGGC+AGG	-	Chr3:65234411-65234430	MsG0380015101.01.T01:intron	35.0%
!	GAGTGTGTTTTGTCTATCAA+AGG	-	Chr3:65234078-65234097	MsG0380015101.01.T01:intron	35.0%
!	GTTGCTCGTTTTATATATCG+TGG	-	Chr3:65237864-65237883	MsG0380015101.01.T01:CDS	35.0%
!	TAGCCAAGATGATGATGATT+TGG	-	Chr3:65235613-65235632	MsG0380015101.01.T01:intron	35.0%
!	TTAGAATCTAGGGGCATAAT+AGG	+	Chr3:65237601-65237620	None:intergenic	35.0%
!!	AGAGGAAAGAAGCATCATTT+AGG	+	Chr3:65234987-65235006	None:intergenic	35.0%
!!!	TTGAAGCATTTTTTGCCATC+TGG	-	Chr3:65235438-65235457	MsG0380015101.01.T01:intron	35.0%
	AAAGTGTACTGTGCAAAGGT+GGG	-	Chr3:65236738-65236757	MsG0380015101.01.T01:intron	40.0%
	AAATAGGTAGTGAAGAGGGA+GGG	-	Chr3:65234389-65234408	MsG0380015101.01.T01:intron	40.0%
	AAATGATGTTGGCCATGAGA+TGG	-	Chr3:65236663-65236682	MsG0380015101.01.T01:intron	40.0%
	AAGTTGCAGTCGTATCTGTA+AGG	+	Chr3:65237401-65237420	None:intergenic	40.0%
	AATAGACAGGGATGGGATTA+TGG	-	Chr3:65233483-65233502	MsG0380015101.01.T01:three_prime_UTR	40.0%
	AATCTACTTCAAGCCCCATA+TGG	-	Chr3:65235919-65235938	MsG0380015101.01.T01:intron	40.0%
	ACCGAATTATAAACCAGAGG+TGG	+	Chr3:65237265-65237284	None:intergenic	40.0%
	ACCTTCACGGTACAAGATAT+TGG	+	Chr3:65235883-65235902	None:intergenic	40.0%
	ACTTATGCAATAGACAGGGA+TGG	-	Chr3:65233475-65233494	MsG0380015101.01.T01:three_prime_UTR	40.0%
	AGAGGGTTTACATTCTCTGA+AGG	-	Chr3:65234570-65234589	MsG0380015101.01.T01:intron	40.0%
	AGATCAAGAACTTCAGCTGA+AGG	-	Chr3:65233799-65233818	MsG0380015101.01.T01:three_prime_UTR	40.0%
	AGCTTCTTCTCCAACCAAAT+AGG	-	Chr3:65236486-65236505	MsG0380015101.01.T01:intron	40.0%
	AGGAAACCCGTAAACATATC+AGG	-	Chr3:65233682-65233701	MsG0380015101.01.T01:three_prime_UTR	40.0%
	AGTTCTTGATCTCCTTGTGT+TGG	+	Chr3:65233791-65233810	None:intergenic	40.0%
	AGTTGCAGTCGTATCTGTAA+GGG	+	Chr3:65237400-65237419	None:intergenic	40.0%
	ATAGACAGGGATGGGATTAT+GGG	-	Chr3:65233484-65233503	MsG0380015101.01.T01:three_prime_UTR	40.0%
	ATGTCTTCAGATGCCAATCT+TGG	-	Chr3:65237646-65237665	MsG0380015101.01.T01:intron	40.0%
	ATTCTGATCCATGCCAAGAT+TGG	+	Chr3:65237662-65237681	None:intergenic	40.0%
	CAAAGCAAAACTGCTTCTTC+GGG	-	Chr3:65235493-65235512	MsG0380015101.01.T01:intron	40.0%
	CAAGAAGCTTTACCCAAATG+TGG	-	Chr3:65237217-65237236	MsG0380015101.01.T01:intron	40.0%
	CACATTTGGGTAAAGCTTCT+TGG	+	Chr3:65237219-65237238	None:intergenic	40.0%
	CACCATGGTAAATCTTTGGA+GGG	-	Chr3:65233417-65233436	MsG0380015101.01.T01:three_prime_UTR	40.0%
	CATCTCTTCTATAGCTGGAA+AGG	-	Chr3:65237773-65237792	MsG0380015101.01.T01:intron	40.0%
	CCAAAGCAAAACTGCTTCTT+CGG	-	Chr3:65235492-65235511	MsG0380015101.01.T01:intron	40.0%
	CCAAATGTCAAAGAGTTGGA+TGG	-	Chr3:65236231-65236250	MsG0380015101.01.T01:intron	40.0%
	CCATCCAACTCTTTGACATT+TGG	+	Chr3:65236234-65236253	None:intergenic	40.0%
	CCGAATTATAAACCAGAGGT+GGG	+	Chr3:65237264-65237283	None:intergenic	40.0%
	CCTTCACGGTACAAGATATT+GGG	+	Chr3:65235882-65235901	None:intergenic	40.0%
	CTGTGTTTGTGATAGATACC+GGG	-	Chr3:65234250-65234269	MsG0380015101.01.T01:intron	40.0%
	CTTATGCAATAGACAGGGAT+GGG	-	Chr3:65233476-65233495	MsG0380015101.01.T01:three_prime_UTR	40.0%
	CTTTACGAGTGTCTTCAAAG+GGG	+	Chr3:65237194-65237213	None:intergenic	40.0%
	GAAAAAGCCTGGAACTTTGT+AGG	-	Chr3:65233704-65233723	MsG0380015101.01.T01:three_prime_UTR	40.0%
	GAGAGAATCAGACAATGAAG+AGG	-	Chr3:65234362-65234381	MsG0380015101.01.T01:intron	40.0%
	GCATAAAGTGTACTGTGCAA+AGG	-	Chr3:65236734-65236753	MsG0380015101.01.T01:intron	40.0%
	GGAAGGAGGGAAATTAATAG+AGG	-	Chr3:65234457-65234476	MsG0380015101.01.T01:intron	40.0%
	GGACAGTCCGACAATTATTA+AGG	-	Chr3:65233354-65233373	MsG0380015101.01.T01:three_prime_UTR	40.0%
	GGCATCTGAAGACATTGATA+GGG	+	Chr3:65237641-65237660	None:intergenic	40.0%
	GGTACAAGATATTGGGAGTT+TGG	+	Chr3:65235875-65235894	None:intergenic	40.0%
	TAAAGTGTACTGTGCAAAGG+TGG	-	Chr3:65236737-65236756	MsG0380015101.01.T01:intron	40.0%
	TAAATAGGTAGTGAAGAGGG+AGG	-	Chr3:65234388-65234407	MsG0380015101.01.T01:intron	40.0%
	TAAATTGGTATGGGTGGAGA+GGG	-	Chr3:65236111-65236130	MsG0380015101.01.T01:intron	40.0%
	TATCCTTATGGAAGAAGGAG+AGG	+	Chr3:65233577-65233596	None:intergenic	40.0%
	TATTTAATGCTACCCCTGCA+GGG	-	Chr3:65235966-65235985	MsG0380015101.01.T01:intron	40.0%
	TCACTGATGTCCTTAGTACA+AGG	-	Chr3:65234290-65234309	MsG0380015101.01.T01:intron	40.0%
	TCTTCTCTTACTCATATCGG+TGG	-	Chr3:65233394-65233413	MsG0380015101.01.T01:three_prime_UTR	40.0%
	TGAAGACATTGATAGGGATG+TGG	+	Chr3:65237635-65237654	None:intergenic	40.0%
	TGGCATCTGAAGACATTGAT+AGG	+	Chr3:65237642-65237661	None:intergenic	40.0%
	TGTGTTTGTGATAGATACCG+GGG	-	Chr3:65234251-65234270	MsG0380015101.01.T01:intron	40.0%
	TTAAATTGGTATGGGTGGAG+AGG	-	Chr3:65236110-65236129	MsG0380015101.01.T01:intron	40.0%
	TTACAGGCTTCCTTGTACTA+AGG	+	Chr3:65234303-65234322	None:intergenic	40.0%
	TTCATCTCCCATATCAGGAA+AGG	-	Chr3:65237695-65237714	MsG0380015101.01.T01:intron	40.0%
	TTGAGACAACGAAAAGAAGC+AGG	+	Chr3:65236040-65236059	None:intergenic	40.0%
!	ACCACAGCAAAAGTAATGGA+TGG	+	Chr3:65235811-65235830	None:intergenic	40.0%
!	CAGACGGAGTATTAGAATCT+AGG	+	Chr3:65237612-65237631	None:intergenic	40.0%
!	CCCACCTCTGGTTTATAATT+CGG	-	Chr3:65237261-65237280	MsG0380015101.01.T01:intron	40.0%
!	GACGGAGTATTAGAATCTAG+GGG	+	Chr3:65237610-65237629	None:intergenic	40.0%
!	GTTTTCCTAGGTCCATCTTA+CGG	-	Chr3:65235140-65235159	MsG0380015101.01.T01:intron	40.0%
!	TACATTCTCTGAAGGAGCTT+TGG	-	Chr3:65234578-65234597	MsG0380015101.01.T01:intron	40.0%
!	TACCATCACTCTTGTTTCAG+CGG	+	Chr3:65235179-65235198	None:intergenic	40.0%
!!	AAGAGCATCTCTTCTATAGC+TGG	-	Chr3:65237768-65237787	MsG0380015101.01.T01:intron	40.0%
!!	AATAGAGAGGTAATGGAAGG+AGG	-	Chr3:65234443-65234462	MsG0380015101.01.T01:intron	40.0%
!!	ACCATCCATTACTTTTGCTG+TGG	-	Chr3:65235807-65235826	MsG0380015101.01.T01:intron	40.0%
!!	AGTTGGATGGGCTGTAATAT+AGG	-	Chr3:65236244-65236263	MsG0380015101.01.T01:intron	40.0%
!!	ATAGAGAGGTAATGGAAGGA+GGG	-	Chr3:65234444-65234463	MsG0380015101.01.T01:intron	40.0%
!!	GAGTTCTGAGGTGATTGTAA+AGG	-	Chr3:65237725-65237744	MsG0380015101.01.T01:intron	40.0%
!!	GTTGGATGGGCTGTAATATA+GGG	-	Chr3:65236245-65236264	MsG0380015101.01.T01:intron	40.0%
	AAAAAGAGTGAGAGTGAGGC+TGG	+	Chr3:65235230-65235249	None:intergenic	45.0%
	AACCTGCAACGAAATCCAGA+TGG	+	Chr3:65235456-65235475	None:intergenic	45.0%
	ACACAAGACTCCCACCATAT+GGG	+	Chr3:65235936-65235955	None:intergenic	45.0%
	ACCTAGGAAAACTATGCCCT+GGG	+	Chr3:65235132-65235151	None:intergenic	45.0%
	ACTCTGTCCTACAAAGTTCC+AGG	+	Chr3:65233714-65233733	None:intergenic	45.0%
	AGAAGAAAGAAAGTGGGACC+AGG	-	Chr3:65234339-65234358	MsG0380015101.01.T01:intron	45.0%
	AGAGGAGGGCAATCTCAAAA+GGG	-	Chr3:65233333-65233352	MsG0380015101.01.T01:three_prime_UTR	45.0%
	AGCTGATCTGGCATTTGCAA+AGG	-	Chr3:65235531-65235550	MsG0380015101.01.T01:intron	45.0%
	AGGACATCAGTGATGACATC+AGG	+	Chr3:65234283-65234302	None:intergenic	45.0%
	ATTGATAGGGATGTGGCAGA+CGG	+	Chr3:65237628-65237647	None:intergenic	45.0%
	ATTTAATGCTACCCCTGCAG+GGG	-	Chr3:65235967-65235986	MsG0380015101.01.T01:intron	45.0%
	CAGACTTCATGTCCGTAAGA+TGG	+	Chr3:65235155-65235174	None:intergenic	45.0%
	CCCAATATCTTGTACCGTGA+AGG	-	Chr3:65235879-65235898	MsG0380015101.01.T01:intron	45.0%
	CCTGCAAACACGAATTGCAT+GGG	+	Chr3:65233620-65233639	None:intergenic	45.0%
	CTCCCTCCAAAGATTTACCA+TGG	+	Chr3:65233422-65233441	None:intergenic	45.0%
	GAACTTTGTAGGACAGAGTC+AGG	-	Chr3:65233715-65233734	MsG0380015101.01.T01:three_prime_UTR	45.0%
	GAAGAAAGAAAGTGGGACCA+GGG	-	Chr3:65234340-65234359	MsG0380015101.01.T01:intron	45.0%
	GATTTCGTTGCAGGTTGCAA+TGG	-	Chr3:65235460-65235479	MsG0380015101.01.T01:intron	45.0%
	GCACCATGGTAAATCTTTGG+AGG	-	Chr3:65233416-65233435	MsG0380015101.01.T01:three_prime_UTR	45.0%
	GCTGTAATATAGGGCCTCTT+TGG	-	Chr3:65236254-65236273	MsG0380015101.01.T01:intron	45.0%
	GGCATTTCATCTCCCATATC+AGG	-	Chr3:65237690-65237709	MsG0380015101.01.T01:intron	45.0%
	GGTTCTTGCAACGTGTAGAA+TGG	+	Chr3:65233746-65233765	None:intergenic	45.0%
	GTACAAGGAAGCCTGTAACT+TGG	-	Chr3:65234305-65234324	MsG0380015101.01.T01:intron	45.0%
	GTACTTAGACGAGAGCAATG+AGG	-	Chr3:65237537-65237556	MsG0380015101.01.T01:CDS	45.0%
	GTATTTAATGCTACCCCTGC+AGG	-	Chr3:65235965-65235984	MsG0380015101.01.T01:intron	45.0%
	GTGGCACCATGGTAAATCTT+TGG	-	Chr3:65233413-65233432	MsG0380015101.01.T01:three_prime_UTR	45.0%
	GTTTCTTAGGGTAGAGAGGA+AGG	+	Chr3:65235370-65235389	None:intergenic	45.0%
	TACACAAGACTCCCACCATA+TGG	+	Chr3:65235937-65235956	None:intergenic	45.0%
	TACAGTTTCAATGGGGCAGA+GGG	-	Chr3:65234553-65234572	MsG0380015101.01.T01:intron	45.0%
	TACTTCAAGCCCCATATGGT+GGG	-	Chr3:65235923-65235942	MsG0380015101.01.T01:intron	45.0%
	TAGAGGAGGGCAATCTCAAA+AGG	-	Chr3:65233332-65233351	MsG0380015101.01.T01:three_prime_UTR	45.0%
	TCATTGTCTGATTCTCTCCC+TGG	+	Chr3:65234360-65234379	None:intergenic	45.0%
	TCCTCTCTACCCTAAGAAAC+AGG	-	Chr3:65235370-65235389	MsG0380015101.01.T01:intron	45.0%
	TCCTGCAAACACGAATTGCA+TGG	+	Chr3:65233621-65233640	None:intergenic	45.0%
	TCGTGAGAATCGCTTTCTGA+GGG	-	Chr3:65237474-65237493	MsG0380015101.01.T01:CDS	45.0%
	TCTCCTCTCCTTCTTCCATA+AGG	-	Chr3:65233571-65233590	MsG0380015101.01.T01:three_prime_UTR	45.0%
	TGAAGACTGTCAAGCTGATC+TGG	-	Chr3:65235519-65235538	MsG0380015101.01.T01:intron	45.0%
	TGCAATTCGTGTTTGCAGGA+AGG	-	Chr3:65233621-65233640	MsG0380015101.01.T01:three_prime_UTR	45.0%
	TGGTCCCACTTTCTTTCTTC+TGG	+	Chr3:65234340-65234359	None:intergenic	45.0%
	TGTGATAGATACCGGGGTAT+TGG	-	Chr3:65234257-65234276	MsG0380015101.01.T01:intron	45.0%
	TTACAGTTTCAATGGGGCAG+AGG	-	Chr3:65234552-65234571	MsG0380015101.01.T01:intron	45.0%
	TTCAGATGCCAATCTTGGCA+TGG	-	Chr3:65237651-65237670	MsG0380015101.01.T01:intron	45.0%
!	ACCTGTTTCTTAGGGTAGAG+AGG	+	Chr3:65235374-65235393	None:intergenic	45.0%
!	ATGGTGGGAGTCTTGTGTAT+TGG	-	Chr3:65235938-65235957	MsG0380015101.01.T01:intron	45.0%
!	CCGAAGAAGCAGTTTTGCTT+TGG	+	Chr3:65235495-65235514	None:intergenic	45.0%
!	GTTTGAGTTTATCCCACCTC+TGG	-	Chr3:65237249-65237268	MsG0380015101.01.T01:intron	45.0%
!!	CTTTGGCTCTGGGGATTATA+GGG	-	Chr3:65234595-65234614	MsG0380015101.01.T01:intron	45.0%
!!	TTTGGCTCTGGGGATTATAG+GGG	-	Chr3:65234596-65234615	MsG0380015101.01.T01:intron	45.0%
	ACTGTGCAAAGGTGGGCAAA+TGG	-	Chr3:65236745-65236764	MsG0380015101.01.T01:intron	50.0%
	AGGAAAACTATGCCCTGGGT+AGG	+	Chr3:65235128-65235147	None:intergenic	50.0%
	AGTGTCTTCAAAGGGGAAGC+AGG	+	Chr3:65237187-65237206	None:intergenic	50.0%
	ATGACATCAGGCCAATACCC+CGG	+	Chr3:65234271-65234290	None:intergenic	50.0%
	CAAACTCAAAACCCCTGCAG+GGG	+	Chr3:65235981-65236000	None:intergenic	50.0%
	CACAAGACTCCCACCATATG+GGG	+	Chr3:65235935-65235954	None:intergenic	50.0%
	CATGTCCGTAAGATGGACCT+AGG	+	Chr3:65235148-65235167	None:intergenic	50.0%
	CCAAACTCAAAACCCCTGCA+GGG	+	Chr3:65235982-65236001	None:intergenic	50.0%
	CCCATGCAATTCGTGTTTGC+AGG	-	Chr3:65233617-65233636	MsG0380015101.01.T01:three_prime_UTR	50.0%
	CCTCCGTGTAAATCGCGAAA+GGG	-	Chr3:65235586-65235605	MsG0380015101.01.T01:intron	50.0%
	CTACTTCAAGCCCCATATGG+TGG	-	Chr3:65235922-65235941	MsG0380015101.01.T01:intron	50.0%
	CTCCCCTTTCGCGATTTACA+CGG	+	Chr3:65235592-65235611	None:intergenic	50.0%
	CTCCGTGTAAATCGCGAAAG+GGG	-	Chr3:65235587-65235606	MsG0380015101.01.T01:intron	50.0%
	CTCGTGAGAATCGCTTTCTG+AGG	-	Chr3:65237473-65237492	MsG0380015101.01.T01:CDS	50.0%
	CTGTGCAAAGGTGGGCAAAT+GGG	-	Chr3:65236746-65236765	MsG0380015101.01.T01:intron	50.0%
	GACCGCTGAAACAAGAGTGA+TGG	-	Chr3:65235174-65235193	MsG0380015101.01.T01:intron	50.0%
	GACCTAGGAAAACTATGCCC+TGG	+	Chr3:65235133-65235152	None:intergenic	50.0%
	GGATCGATGTGCTCAACTAG+AGG	-	Chr3:65235552-65235571	MsG0380015101.01.T01:intron	50.0%
	GTGTCTTCAAAGGGGAAGCA+GGG	+	Chr3:65237186-65237205	None:intergenic	50.0%
	GTTGCAGGTTGCAATGGCAA+TGG	-	Chr3:65235466-65235485	MsG0380015101.01.T01:intron	50.0%
	TACTCATATCGGTGGCACCA+TGG	-	Chr3:65233402-65233421	MsG0380015101.01.T01:three_prime_UTR	50.0%
	TCCTCCGTGTAAATCGCGAA+AGG	-	Chr3:65235585-65235604	MsG0380015101.01.T01:intron	50.0%
	TCTAGCTGAGAAAGCTCGCT+TGG	-	Chr3:65237429-65237448	MsG0380015101.01.T01:CDS	50.0%
	TGCCATCTGGATTTCGTTGC+AGG	-	Chr3:65235451-65235470	MsG0380015101.01.T01:intron	50.0%
!	AATAGGGAGGTAGTGGCATG+AGG	-	Chr3:65234500-65234519	MsG0380015101.01.T01:intron	50.0%
!	ACCCAGGGCATAGTTTTCCT+AGG	-	Chr3:65235128-65235147	MsG0380015101.01.T01:intron	50.0%
!	CTAGGGGCATAATAGGCACT+GGG	+	Chr3:65237594-65237613	None:intergenic	50.0%
!	GCTAGTGTCATTCTCTGTGC+AGG	-	Chr3:65233291-65233310	MsG0380015101.01.T01:three_prime_UTR	50.0%
!	TAGGGGCATAATAGGCACTG+GGG	+	Chr3:65237593-65237612	None:intergenic	50.0%
!	TCCTTGTGTTGGCGACATCT+GGG	+	Chr3:65233780-65233799	None:intergenic	50.0%
!	TCTAGGGGCATAATAGGCAC+TGG	+	Chr3:65237595-65237614	None:intergenic	50.0%
!	TGAGAATCGCTTTCTGAGGG+AGG	-	Chr3:65237477-65237496	MsG0380015101.01.T01:CDS	50.0%
!	TGAGGTCTAAAGCCTACCCA+GGG	-	Chr3:65235113-65235132	MsG0380015101.01.T01:intron	50.0%
!!	GCTTTGGCTCTGGGGATTAT+AGG	-	Chr3:65234594-65234613	MsG0380015101.01.T01:intron	50.0%
!!	TCTGAAGGAGCTTTGGCTCT+GGG	-	Chr3:65234585-65234604	MsG0380015101.01.T01:intron	50.0%
	AAGGTGGGCAAATGGGAGCA+TGG	-	Chr3:65236753-65236772	MsG0380015101.01.T01:intron	55.0%
	CCCTTTCGCGATTTACACGG+AGG	+	Chr3:65235589-65235608	None:intergenic	55.0%
	CGTTGCAAGAACCCCAGTTG+CGG	-	Chr3:65233753-65233772	MsG0380015101.01.T01:three_prime_UTR	55.0%
	GCCAAACTCAAAACCCCTGC+AGG	+	Chr3:65235983-65236002	None:intergenic	55.0%
	TCCCAGATGTCGCCAACACA+AGG	-	Chr3:65233776-65233795	MsG0380015101.01.T01:three_prime_UTR	55.0%
!	CTCCTTGTGTTGGCGACATC+TGG	+	Chr3:65233781-65233800	None:intergenic	55.0%
!	CTCTGAAGGAGCTTTGGCTC+TGG	-	Chr3:65234584-65234603	MsG0380015101.01.T01:intron	55.0%
!	CTGAGGTCTAAAGCCTACCC+AGG	-	Chr3:65235112-65235131	MsG0380015101.01.T01:intron	55.0%
!	GGCACTGGGGGTAAGTTAAG+AGG	+	Chr3:65237580-65237599	None:intergenic	55.0%
!!	AGGGGCATAATAGGCACTGG+GGG	+	Chr3:65237592-65237611	None:intergenic	55.0%
!!	CTGAAGGAGCTTTGGCTCTG+GGG	-	Chr3:65234586-65234605	MsG0380015101.01.T01:intron	55.0%
!!	TGAAGGCATCTCGCGACGTA+AGG	-	Chr3:65233816-65233835	MsG0380015101.01.T01:three_prime_UTR	55.0%
!!!	CCCTGCAGGGGTTTTGAGTT+TGG	-	Chr3:65235979-65235998	MsG0380015101.01.T01:intron	55.0%
	AGGCATCTCGCGACGTAAGG+TGG	-	Chr3:65233819-65233838	MsG0380015101.01.T01:three_prime_UTR	60.0%
	CAAAGGGGAAGCAGGGAGAG+TGG	+	Chr3:65237179-65237198	None:intergenic	60.0%
!	AGGGAGGTAGTGGCATGAGG+AGG	-	Chr3:65234503-65234522	MsG0380015101.01.T01:intron	60.0%
!	CGACATCTGGGACCGCAACT+GGG	+	Chr3:65233768-65233787	None:intergenic	60.0%
!	GACATCTGGGACCGCAACTG+GGG	+	Chr3:65233767-65233786	None:intergenic	60.0%
!	GCGACATCTGGGACCGCAAC+TGG	+	Chr3:65233769-65233788	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr3	gene	65233289	65237966	65233289	ID=MsG0380015101.01;Name=MsG0380015101.01
Chr3	mRNA	65233289	65237966	65233289	ID=MsG0380015101.01.T01;Parent=MsG0380015101.01;Name=MsG0380015101.01.T01;_AED=0.42;_eAED=0.58;_QI=0\|0\|0.16\|0.83\|1\|1\|6\|678\|158
Chr3	exon	65233289	65233849	65233289	ID=MsG0380015101.01.T01:exon:13084;Parent=MsG0380015101.01.T01
Chr3	exon	65233973	65234091	65233973	ID=MsG0380015101.01.T01:exon:13083;Parent=MsG0380015101.01.T01
Chr3	exon	65235663	65235782	65235663	ID=MsG0380015101.01.T01:exon:13082;Parent=MsG0380015101.01.T01
Chr3	exon	65237423	65237616	65237423	ID=MsG0380015101.01.T01:exon:13081;Parent=MsG0380015101.01.T01
Chr3	exon	65237738	65237763	65237738	ID=MsG0380015101.01.T01:exon:13080;Parent=MsG0380015101.01.T01
Chr3	exon	65237832	65237966	65237832	ID=MsG0380015101.01.T01:exon:13079;Parent=MsG0380015101.01.T01
Chr3	CDS	65237832	65237966	65237832	ID=MsG0380015101.01.T01:cds;Parent=MsG0380015101.01.T01
Chr3	CDS	65237738	65237763	65237738	ID=MsG0380015101.01.T01:cds;Parent=MsG0380015101.01.T01
Chr3	CDS	65237423	65237616	65237423	ID=MsG0380015101.01.T01:cds;Parent=MsG0380015101.01.T01
Chr3	CDS	65235663	65235782	65235663	ID=MsG0380015101.01.T01:cds;Parent=MsG0380015101.01.T01
Chr3	CDS	65234090	65234091	65234090	ID=MsG0380015101.01.T01:cds;Parent=MsG0380015101.01.T01
Chr3	three_prime_UTR	65233973	65234089	65233973	ID=MsG0380015101.01.T01:three_prime_utr;Parent=MsG0380015101.01.T01
Chr3	three_prime_UTR	65233289	65233849	65233289	ID=MsG0380015101.01.T01:three_prime_utr;Parent=MsG0380015101.01.T01

Gene Sequence

>MsG0380015101.01.T01

ATGCTAGTGTCATTCTCTGTGCAGGTCCAAAATTCGAATCACTTAGAGGAGGGCAATCTCAAAAGGGACAGTCCGACAATTATTAAGGGATTAGATGCTATCACATCTTCTCTTACTCATATCGGTGGCACCATGGGATGGGATTATGGGAATGTGTTACAGAAGGTTTTACAATTGTTGAGAATAGGACTTCAGATATCATTCAGGAAACCCGTAAACATATCAGGAAAAAGCCTGGAACTTTGTAGGACAGAGTCAGGAAACACCATTCTACACGTTGCAAGAACCCCAGTTGCGGTCCCAGATGTCGCCAACACAAGGAGATCAAGAACTTCAGCTGAAGGCATCTCGCGACGTTGCAATGGCAATGGCTGCCAAAGCAAAACTGCTTCTTCGGGAGTTGAAGACTGTCAAGCTGATCTGGCATTTGCAAAGGATCGATGTGCTCAACTAGAGGAAGAAATAAATCCTCCGTAG

Protein sequence

>MsG0380015101.01.T01

MLVSFSVQVQNSNHLEEGNLKRDSPTIIKGLDAITSSLTHIGGTMGWDYGNVLQKVLQLLRIGLQISFRKPVNISGKSLELCRTESGNTILHVARTPVAVPDVANTRRSRTSAEGISRRCNGNGCQSKTASSGVEDCQADLAFAKDRCAQLEEEINPP*