Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039896.01.T01 | XP_024626779.1 | 95.291 | 361 | 7 | 5 | 1 | 354 | 1 | 358 | 0 | 684 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039896.01.T01 | O23550 | 58.824 | 68 | 28 | 0 | 278 | 345 | 233 | 300 | 3.49E-17 | 84.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039896.01.T01 | A2Q1W1 | 94.737 | 323 | 9 | 3 | 37 | 354 | 39 | 358 | 2.61e-155 | 452 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048178.01 | MsG0780039896.01 | 0.804403 | 2.196946e-49 | 1.131691e-46 |
| MsG0080048210.01 | MsG0780039896.01 | 0.810272 | 1.251785e-50 | 7.512568e-48 |
| MsG0080048461.01 | MsG0780039896.01 | 0.816250 | 6.091416e-52 | 4.294325e-49 |
| MsG0180000235.01 | MsG0780039896.01 | 0.800598 | 1.337121e-48 | 6.251234e-46 |
| MsG0180000402.01 | MsG0780039896.01 | 0.800998 | 1.107683e-48 | 5.231929e-46 |
| MsG0180000470.01 | MsG0780039896.01 | 0.804915 | 1.717348e-49 | 8.965288e-47 |
| MsG0180000475.01 | MsG0780039896.01 | 0.837475 | 5.086697e-57 | 6.615201e-54 |
| MsG0180000555.01 | MsG0780039896.01 | 0.821565 | 3.773504e-53 | 3.080921e-50 |
| MsG0180000585.01 | MsG0780039896.01 | 0.822240 | 2.632942e-53 | 2.191357e-50 |
| MsG0180000732.01 | MsG0780039896.01 | 0.803196 | 3.912393e-49 | 1.953899e-46 |
| MsG0180000797.01 | MsG0780039896.01 | 0.809250 | 2.076068e-50 | 1.212862e-47 |
| MsG0180001312.01 | MsG0780039896.01 | 0.853407 | 2.439418e-61 | 5.265427e-58 |
| MsG0180001381.01 | MsG0780039896.01 | 0.804889 | 1.738894e-49 | 9.071895e-47 |
| MsG0180001663.01 | MsG0780039896.01 | 0.819528 | 1.107857e-52 | 8.547117e-50 |
| MsG0180001840.01 | MsG0780039896.01 | 0.821077 | 4.891913e-53 | 3.940355e-50 |
| MsG0180001904.01 | MsG0780039896.01 | 0.826177 | 3.129542e-54 | 2.913261e-51 |
| MsG0180001922.01 | MsG0780039896.01 | 0.828930 | 6.834388e-55 | 6.890677e-52 |
| MsG0180002955.01 | MsG0780039896.01 | 0.810858 | 9.350675e-51 | 5.700303e-48 |
| MsG0180002973.01 | MsG0780039896.01 | 0.802299 | 5.991633e-49 | 2.924768e-46 |
| MsG0180004372.01 | MsG0780039896.01 | 0.831354 | 1.750945e-55 | 1.895296e-52 |
| MsG0180004449.01 | MsG0780039896.01 | 0.803297 | 3.728628e-49 | 1.866890e-46 |
| MsG0180004599.01 | MsG0780039896.01 | 0.823135 | 1.630261e-53 | 1.391846e-50 |
| MsG0180004600.01 | MsG0780039896.01 | 0.820593 | 6.318353e-53 | 5.020536e-50 |
| MsG0180004730.01 | MsG0780039896.01 | 0.802079 | 6.651129e-49 | 3.228343e-46 |
| MsG0180005228.01 | MsG0780039896.01 | 0.823371 | 1.435770e-53 | 1.233793e-50 |
| MsG0180005398.01 | MsG0780039896.01 | 0.812247 | 4.665870e-51 | 2.951578e-48 |
| MsG0180005743.01 | MsG0780039896.01 | 0.832884 | 7.326825e-56 | 8.298890e-53 |
| MsG0180005842.01 | MsG0780039896.01 | 0.834051 | 3.746756e-56 | 4.395037e-53 |
| MsG0180006106.01 | MsG0780039896.01 | 0.805154 | 1.530520e-49 | 8.038561e-47 |
| MsG0280006356.01 | MsG0780039896.01 | 0.826301 | 2.924875e-54 | 2.732252e-51 |
| MsG0280010614.01 | MsG0780039896.01 | 0.803375 | 3.592623e-49 | 1.802374e-46 |
| MsG0280010784.01 | MsG0780039896.01 | 0.816360 | 5.757250e-52 | 4.070818e-49 |
| MsG0280010816.01 | MsG0780039896.01 | 0.834710 | 2.560524e-56 | 3.063026e-53 |
| MsG0280010976.01 | MsG0780039896.01 | 0.834232 | 3.376942e-56 | 3.982455e-53 |
| MsG0280011032.01 | MsG0780039896.01 | 0.825217 | 5.286566e-54 | 4.788630e-51 |
| MsG0280011052.01 | MsG0780039896.01 | 0.840977 | 6.282178e-58 | 9.099213e-55 |
| MsG0280011131.01 | MsG0780039896.01 | 0.830381 | 3.031839e-55 | 3.189040e-52 |
| MsG0280011334.01 | MsG0780039896.01 | 0.816478 | 5.415769e-52 | 3.841671e-49 |
| MsG0280011410.01 | MsG0780039896.01 | 0.839097 | 1.942733e-57 | 2.654923e-54 |
| MsG0280011446.01 | MsG0780039896.01 | 0.804129 | 2.504860e-49 | 1.281287e-46 |
| MsG0380011729.01 | MsG0780039896.01 | 0.806955 | 6.395751e-50 | 3.517882e-47 |
| MsG0380011754.01 | MsG0780039896.01 | 0.808090 | 3.673434e-50 | 2.081258e-47 |
| MsG0380012020.01 | MsG0780039896.01 | 0.810308 | 1.229790e-50 | 7.387330e-48 |
| MsG0380012057.01 | MsG0780039896.01 | 0.834349 | 3.156211e-56 | 3.735566e-53 |
| MsG0380012279.01 | MsG0780039896.01 | -0.805046 | 1.612511e-49 | 8.445576e-47 |
| MsG0380012458.01 | MsG0780039896.01 | 0.840496 | 8.396318e-58 | 1.198203e-54 |
| MsG0380014135.01 | MsG0780039896.01 | 0.804058 | 2.591805e-49 | 1.323428e-46 |
| MsG0380014365.01 | MsG0780039896.01 | 0.821064 | 4.924699e-53 | 3.965449e-50 |
| MsG0380014573.01 | MsG0780039896.01 | 0.809895 | 1.509150e-50 | 8.968215e-48 |
| MsG0380014701.01 | MsG0780039896.01 | 0.826330 | 2.878791e-54 | 2.691407e-51 |
| MsG0380014913.01 | MsG0780039896.01 | 0.800173 | 1.631579e-48 | 7.546001e-46 |
| MsG0680030841.01 | MsG0780039896.01 | 0.809522 | 1.815198e-50 | 1.068132e-47 |
| MsG0680031946.01 | MsG0780039896.01 | 0.821270 | 4.415586e-53 | 3.575331e-50 |
| MsG0680034115.01 | MsG0780039896.01 | 0.823551 | 1.303088e-53 | 1.125554e-50 |
| MsG0480018778.01 | MsG0780039896.01 | 0.810243 | 1.270129e-50 | 7.616792e-48 |
| MsG0480019816.01 | MsG0780039896.01 | 0.809474 | 1.858438e-50 | 1.092171e-47 |
| MsG0480020445.01 | MsG0780039896.01 | 0.820409 | 6.965580e-53 | 5.507315e-50 |
| MsG0480021409.01 | MsG0780039896.01 | 0.814869 | 1.236912e-51 | 8.396183e-49 |
| MsG0480021426.01 | MsG0780039896.01 | 0.822989 | 1.762962e-53 | 1.498908e-50 |
| MsG0480021695.01 | MsG0780039896.01 | 0.827106 | 1.878616e-54 | 1.796062e-51 |
| MsG0480021819.01 | MsG0780039896.01 | 0.810474 | 1.132412e-50 | 6.832587e-48 |
| MsG0480021853.01 | MsG0780039896.01 | 0.807932 | 3.970508e-50 | 2.240039e-47 |
| MsG0480021900.01 | MsG0780039896.01 | 0.800790 | 1.221403e-48 | 5.737993e-46 |
| MsG0480022597.01 | MsG0780039896.01 | 0.826495 | 2.629674e-54 | 2.470008e-51 |
| MsG0480022752.01 | MsG0780039896.01 | 0.801885 | 7.290140e-49 | 3.521308e-46 |
| MsG0480022933.01 | MsG0780039896.01 | 0.813279 | 2.773664e-51 | 1.803484e-48 |
| MsG0480023014.01 | MsG0780039896.01 | 0.828679 | 7.864021e-55 | 7.871217e-52 |
| MsG0480023025.01 | MsG0780039896.01 | 0.816997 | 4.143370e-52 | 2.981408e-49 |
| MsG0480023088.01 | MsG0780039896.01 | 0.804913 | 1.719559e-49 | 8.976096e-47 |
| MsG0480023224.01 | MsG0780039896.01 | 0.819357 | 1.211616e-52 | 9.302049e-50 |
| MsG0480023248.01 | MsG0780039896.01 | 0.855181 | 7.492878e-62 | 1.714933e-58 |
| MsG0480023427.01 | MsG0780039896.01 | 0.804011 | 2.650973e-49 | 1.351960e-46 |
| MsG0480023517.01 | MsG0780039896.01 | 0.801861 | 7.374325e-49 | 3.559708e-46 |
| MsG0480023654.01 | MsG0780039896.01 | 0.806287 | 8.850723e-50 | 4.785532e-47 |
| MsG0480023670.01 | MsG0780039896.01 | 0.818372 | 2.028321e-52 | 1.515653e-49 |
| MsG0480023718.01 | MsG0780039896.01 | 0.821642 | 3.622346e-53 | 2.963819e-50 |
| MsG0580024251.01 | MsG0780039896.01 | 0.812207 | 4.760609e-51 | 3.008194e-48 |
| MsG0580024305.01 | MsG0780039896.01 | 0.804531 | 2.065422e-49 | 1.067461e-46 |
| MsG0580024306.01 | MsG0780039896.01 | 0.814321 | 1.635563e-51 | 1.093994e-48 |
| MsG0580024374.01 | MsG0780039896.01 | 0.801064 | 1.074060e-48 | 5.081333e-46 |
| MsG0580024418.01 | MsG0780039896.01 | 0.821598 | 3.708772e-53 | 3.030658e-50 |
| MsG0580024733.01 | MsG0780039896.01 | 0.818721 | 1.690549e-52 | 1.275340e-49 |
| MsG0580024996.01 | MsG0780039896.01 | 0.809466 | 1.866554e-50 | 1.096699e-47 |
| MsG0580025008.01 | MsG0780039896.01 | 0.809026 | 2.318845e-50 | 1.346525e-47 |
| MsG0580025009.01 | MsG0780039896.01 | 0.819799 | 9.606725e-53 | 7.468009e-50 |
| MsG0580025328.01 | MsG0780039896.01 | 0.833513 | 5.107903e-56 | 5.895724e-53 |
| MsG0580025448.01 | MsG0780039896.01 | 0.802505 | 5.433454e-49 | 2.666148e-46 |
| MsG0580025555.01 | MsG0780039896.01 | 0.820898 | 5.378374e-53 | 4.310457e-50 |
| MsG0580025666.01 | MsG0780039896.01 | 0.822594 | 2.178690e-53 | 1.831927e-50 |
| MsG0580025758.01 | MsG0780039896.01 | 0.800790 | 1.221403e-48 | 5.737993e-46 |
| MsG0380015101.01 | MsG0780039896.01 | 0.802248 | 6.140097e-49 | 2.993229e-46 |
| MsG0380015771.01 | MsG0780039896.01 | 0.818590 | 1.810239e-52 | 1.360695e-49 |
| MsG0380015830.01 | MsG0780039896.01 | 0.845602 | 3.666310e-59 | 6.142009e-56 |
| MsG0380016187.01 | MsG0780039896.01 | 0.825560 | 4.385319e-54 | 4.010968e-51 |
| MsG0380016475.01 | MsG0780039896.01 | 0.809228 | 2.099164e-50 | 1.225638e-47 |
| MsG0380016581.01 | MsG0780039896.01 | 0.819206 | 1.311841e-52 | 1.002990e-49 |
| MsG0380016624.01 | MsG0780039896.01 | 0.840422 | 8.780214e-58 | 1.250059e-54 |
| MsG0380017140.01 | MsG0780039896.01 | 0.834922 | 2.264996e-56 | 2.727242e-53 |
| MsG0380017233.01 | MsG0780039896.01 | 0.809231 | 2.096318e-50 | 1.224070e-47 |
| MsG0380017495.01 | MsG0780039896.01 | 0.802739 | 4.863319e-49 | 2.400678e-46 |
| MsG0380017528.01 | MsG0780039896.01 | 0.815350 | 9.671924e-52 | 6.652146e-49 |
| MsG0380018009.01 | MsG0780039896.01 | 0.809603 | 1.744054e-50 | 1.028536e-47 |
| MsG0580026596.01 | MsG0780039896.01 | 0.810997 | 8.725561e-51 | 5.339333e-48 |
| MsG0580027129.01 | MsG0780039896.01 | 0.809746 | 1.625065e-50 | 9.620147e-48 |
| MsG0580027152.01 | MsG0780039896.01 | 0.819560 | 1.089112e-52 | 8.409854e-50 |
| MsG0580027228.01 | MsG0780039896.01 | 0.814068 | 1.859788e-51 | 1.235467e-48 |
| MsG0580027628.01 | MsG0780039896.01 | 0.800025 | 1.748837e-48 | 8.058083e-46 |
| MsG0580027926.01 | MsG0780039896.01 | 0.806665 | 7.367638e-50 | 4.021985e-47 |
| MsG0580028969.01 | MsG0780039896.01 | 0.811107 | 8.260279e-51 | 5.068725e-48 |
| MsG0580029554.01 | MsG0780039896.01 | 0.816266 | 6.043316e-52 | 4.262272e-49 |
| MsG0680030316.01 | MsG0780039896.01 | 0.806170 | 9.369999e-50 | 5.051277e-47 |
| MsG0680030351.01 | MsG0780039896.01 | 0.822997 | 1.755471e-53 | 1.492869e-50 |
| MsG0680030684.01 | MsG0780039896.01 | 0.800807 | 1.212039e-48 | 5.696457e-46 |
| MsG0680030685.01 | MsG0780039896.01 | 0.810215 | 1.287723e-50 | 7.716367e-48 |
| MsG0280006906.01 | MsG0780039896.01 | 0.815013 | 1.148714e-51 | 7.828534e-49 |
| MsG0280006935.01 | MsG0780039896.01 | 0.819921 | 9.007259e-53 | 7.025861e-50 |
| MsG0280007072.01 | MsG0780039896.01 | 0.803108 | 4.080215e-49 | 2.032999e-46 |
| MsG0280007088.01 | MsG0780039896.01 | 0.804808 | 1.808255e-49 | 9.413471e-47 |
| MsG0280007117.01 | MsG0780039896.01 | 0.809296 | 2.030112e-50 | 1.187435e-47 |
| MsG0280007120.01 | MsG0780039896.01 | 0.835020 | 2.139505e-56 | 2.583567e-53 |
| MsG0280007549.01 | MsG0780039896.01 | 0.816849 | 4.474237e-52 | 3.206187e-49 |
| MsG0280007727.01 | MsG0780039896.01 | 0.817328 | 3.490434e-52 | 2.534260e-49 |
| MsG0280007745.01 | MsG0780039896.01 | 0.830983 | 2.159008e-55 | 2.311564e-52 |
| MsG0280007984.01 | MsG0780039896.01 | 0.809714 | 1.650979e-50 | 9.764991e-48 |
| MsG0280008030.01 | MsG0780039896.01 | 0.809463 | 1.868879e-50 | 1.097988e-47 |
| MsG0280008039.01 | MsG0780039896.01 | 0.829823 | 4.148053e-55 | 4.294275e-52 |
| MsG0280008363.01 | MsG0780039896.01 | 0.817231 | 3.670282e-52 | 2.657712e-49 |
| MsG0280008502.01 | MsG0780039896.01 | 0.805029 | 1.626262e-49 | 8.513463e-47 |
| MsG0280008907.01 | MsG0780039896.01 | 0.836701 | 8.018517e-57 | 1.018531e-53 |
| MsG0280008970.01 | MsG0780039896.01 | 0.829344 | 5.426675e-55 | 5.539393e-52 |
| MsG0280009024.01 | MsG0780039896.01 | 0.812835 | 3.471796e-51 | 2.230414e-48 |
| MsG0280010416.01 | MsG0780039896.01 | 0.816345 | 5.802248e-52 | 4.101134e-49 |
| MsG0280010531.01 | MsG0780039896.01 | 0.839336 | 1.684052e-57 | 2.318411e-54 |
| MsG0780035958.01 | MsG0780039896.01 | 0.826822 | 2.197015e-54 | 2.083135e-51 |
| MsG0780036548.01 | MsG0780039896.01 | 0.803602 | 3.224158e-49 | 1.627077e-46 |
| MsG0780036630.01 | MsG0780039896.01 | 0.812057 | 5.133702e-51 | 3.230506e-48 |
| MsG0780036635.01 | MsG0780039896.01 | 0.813767 | 2.166894e-51 | 1.427702e-48 |
| MsG0780037287.01 | MsG0780039896.01 | 0.803239 | 3.832142e-49 | 1.915906e-46 |
| MsG0780037515.01 | MsG0780039896.01 | 0.825106 | 5.615250e-54 | 5.070188e-51 |
| MsG0780037975.01 | MsG0780039896.01 | 0.824444 | 8.044055e-54 | 7.125934e-51 |
| MsG0780038092.01 | MsG0780039896.01 | 0.842879 | 1.974634e-58 | 3.035247e-55 |
| MsG0780038117.01 | MsG0780039896.01 | 0.814082 | 1.846489e-51 | 1.227062e-48 |
| MsG0780038231.01 | MsG0780039896.01 | 0.859722 | 3.398423e-63 | 9.063041e-60 |
| MsG0780038323.01 | MsG0780039896.01 | 0.808857 | 2.519636e-50 | 1.456553e-47 |
| MsG0780038827.01 | MsG0780039896.01 | 0.810653 | 1.035937e-50 | 6.280436e-48 |
| MsG0780039144.01 | MsG0780039896.01 | 0.816938 | 4.272155e-52 | 3.069066e-49 |
| MsG0780039896.01 | MsG0780039952.01 | 0.801356 | 9.361194e-49 | 4.461329e-46 |
| MsG0780039896.01 | MsG0780040176.01 | 0.802631 | 5.120149e-49 | 2.520405e-46 |
| MsG0780039896.01 | MsG0780040442.01 | 0.805730 | 1.159222e-49 | 6.179548e-47 |
| MsG0780039896.01 | MsG0780040679.01 | 0.802861 | 4.588889e-49 | 2.272220e-46 |
| MsG0780039896.01 | MsG0780040947.01 | 0.823990 | 1.028545e-53 | 8.995066e-51 |
| MsG0780039896.01 | MsG0780041065.01 | 0.809425 | 1.904077e-50 | 1.117593e-47 |
| MsG0780039896.01 | MsG0780041368.01 | 0.800144 | 1.653864e-48 | 7.643608e-46 |
| MsG0780039896.01 | MsG0780041370.01 | 0.808797 | 2.596063e-50 | 1.498288e-47 |
| MsG0780039896.01 | MsG0780041376.01 | 0.824418 | 8.159209e-54 | 7.222401e-51 |
| MsG0780039896.01 | MsG0780041469.01 | 0.801836 | 7.461803e-49 | 3.599569e-46 |
| MsG0780039896.01 | MsG0780041754.01 | 0.804003 | 2.660597e-49 | 1.356605e-46 |
| MsG0780039896.01 | MsG0880042301.01 | 0.805203 | 1.494962e-49 | 7.861639e-47 |
| MsG0780039896.01 | MsG0880042743.01 | 0.805580 | 1.246315e-49 | 6.617751e-47 |
| MsG0780039896.01 | MsG0880042792.01 | 0.808780 | 2.617073e-50 | 1.509751e-47 |
| MsG0780039896.01 | MsG0880043059.01 | 0.850222 | 1.952797e-60 | 3.798415e-57 |
| MsG0780039896.01 | MsG0880043116.01 | 0.822444 | 2.360859e-53 | 1.976436e-50 |
| MsG0780039896.01 | MsG0880043172.01 | 0.813535 | 2.437059e-51 | 1.595747e-48 |
| MsG0780039896.01 | MsG0880043591.01 | 0.842237 | 2.923862e-58 | 4.405001e-55 |
| MsG0780039896.01 | MsG0880043804.01 | 0.835211 | 1.914377e-56 | 2.325294e-53 |
| MsG0780039896.01 | MsG0880045106.01 | 0.801494 | 8.768246e-49 | 4.193393e-46 |
| MsG0780039896.01 | MsG0880045133.01 | 0.800700 | 1.274293e-48 | 5.972860e-46 |
| MsG0780039896.01 | MsG0880045415.01 | 0.830074 | 3.603720e-55 | 3.756796e-52 |
| MsG0780039896.01 | MsG0880045450.01 | 0.809474 | 1.858424e-50 | 1.092171e-47 |
| MsG0780039896.01 | MsG0880045639.01 | 0.801142 | 1.035288e-48 | 4.907483e-46 |
| MsG0780039896.01 | MsG0880046244.01 | 0.806915 | 6.522515e-50 | 3.583904e-47 |
| MsG0780039896.01 | MsG0880046560.01 | 0.802631 | 5.120149e-49 | 2.520405e-46 |
| MsG0780039896.01 | MsG0880046561.01 | 0.816254 | 6.079633e-52 | 4.286485e-49 |
| MsG0780039896.01 | MsG0880046733.01 | 0.821342 | 4.248299e-53 | 3.447046e-50 |
| MsG0780039896.01 | MsG0880047425.01 | 0.806854 | 6.719063e-50 | 3.686183e-47 |
| MsG0780039896.01 | MsG0880047497.01 | 0.823868 | 1.098706e-53 | 9.576304e-51 |
| MsG0780039896.01 | MsG0880047594.01 | 0.806327 | 8.681159e-50 | 4.698585e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039896.01.T01 | MTR_7g081190 | 94.737 | 323 | 9 | 3 | 37 | 354 | 39 | 358 | 6.61e-159 | 452 |
| MsG0780039896.01.T01 | MTR_4g117990 | 56.966 | 323 | 83 | 9 | 35 | 342 | 35 | 316 | 1.52e-95 | 289 |
| MsG0780039896.01.T01 | MTR_5g017500 | 45.926 | 135 | 61 | 4 | 23 | 156 | 8 | 131 | 9.57e-27 | 107 |
| MsG0780039896.01.T01 | MTR_4g079960 | 35.211 | 142 | 78 | 6 | 15 | 153 | 8 | 138 | 7.14e-13 | 69.3 |
| MsG0780039896.01.T01 | MTR_4g079960 | 41.000 | 100 | 48 | 4 | 15 | 111 | 8 | 99 | 7.61e-13 | 68.9 |
| MsG0780039896.01.T01 | MTR_4g079960 | 41.000 | 100 | 48 | 4 | 15 | 111 | 8 | 99 | 1.47e-12 | 68.2 |
| MsG0780039896.01.T01 | MTR_2g016140 | 27.103 | 107 | 75 | 1 | 32 | 138 | 11 | 114 | 4.52e-11 | 63.9 |
| MsG0780039896.01.T01 | MTR_2g016140 | 27.103 | 107 | 75 | 1 | 32 | 138 | 11 | 114 | 5.19e-11 | 63.9 |
| MsG0780039896.01.T01 | MTR_1g061600 | 34.951 | 103 | 59 | 3 | 44 | 146 | 133 | 227 | 6.46e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0780039896.01.T01 | AT2G44730 | 47.025 | 353 | 135 | 9 | 26 | 352 | 46 | 372 | 3.61e-80 | 251 |
| MsG0780039896.01.T01 | AT3G24860 | 26.923 | 312 | 164 | 8 | 29 | 336 | 50 | 301 | 1.51e-25 | 105 |
| MsG0780039896.01.T01 | AT4G17060 | 58.824 | 68 | 28 | 0 | 278 | 345 | 233 | 300 | 3.56e-18 | 84.7 |
| MsG0780039896.01.T01 | AT3G14180 | 34.375 | 96 | 57 | 3 | 43 | 138 | 83 | 172 | 9.28e-14 | 72.8 |
| MsG0780039896.01.T01 | AT3G58630 | 32.374 | 139 | 80 | 4 | 30 | 159 | 15 | 148 | 8.06e-12 | 66.2 |
| MsG0780039896.01.T01 | AT3G58630 | 32.374 | 139 | 80 | 4 | 30 | 159 | 15 | 148 | 8.28e-12 | 66.2 |
| MsG0780039896.01.T01 | AT3G10030 | 33.684 | 95 | 56 | 2 | 44 | 138 | 161 | 248 | 1.84e-11 | 65.9 |
| MsG0780039896.01.T01 | AT3G10030 | 32.632 | 95 | 57 | 2 | 44 | 138 | 161 | 248 | 1.96e-11 | 65.9 |
| MsG0780039896.01.T01 | AT3G54390 | 33.628 | 113 | 63 | 3 | 38 | 149 | 32 | 133 | 3.74e-11 | 63.9 |
| MsG0780039896.01.T01 | AT3G54390 | 33.628 | 113 | 63 | 3 | 38 | 149 | 48 | 149 | 4.33e-11 | 63.9 |
Find 112 sgRNAs with CRISPR-Local
Find 134 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGGTTGGTGGTGGTGGTGC+TGG | 0.178332 | 7:+70229435 | None:intergenic |
| CTTCAAAGCTATGGATTCTA+TGG | 0.221661 | 7:-70229124 | MsG0780039896.01.T01:CDS |
| ATCAGAGCAGAGGTTTCTTC+TGG | 0.224387 | 7:+70229381 | None:intergenic |
| CCGGTGGTGGGTTTCGGATT+AGG | 0.234801 | 7:-70228861 | MsG0780039896.01.T01:CDS |
| GAAGCGTACTGAGATGATTT+TGG | 0.239738 | 7:-70228554 | MsG0780039896.01.T01:CDS |
| CATGGATATGATTATGATTA+GGG | 0.240676 | 7:+70229058 | None:intergenic |
| TCCGGTGGTTCGGGTGGTTT+TGG | 0.257177 | 7:-70228889 | MsG0780039896.01.T01:CDS |
| TGAAATGGTGAATGCTATTA+AGG | 0.263524 | 7:-70228662 | MsG0780039896.01.T01:CDS |
| ATGTTTCACGGTGGTTAATA+AGG | 0.266675 | 7:+70229028 | None:intergenic |
| AAAATGAACAATTCAGAATC+TGG | 0.292564 | 7:-70228790 | MsG0780039896.01.T01:CDS |
| CCATGGATATGATTATGATT+AGG | 0.293625 | 7:+70229057 | None:intergenic |
| GCTGGTGGTGGTTCTGGTTC+TGG | 0.305597 | 7:-70228952 | MsG0780039896.01.T01:CDS |
| CTATACCGGAATGGAGTTTC+CGG | 0.308151 | 7:-70228907 | MsG0780039896.01.T01:CDS |
| AGGTTGGTGGTGGTGGTGCT+GGG | 0.313697 | 7:+70229436 | None:intergenic |
| AATGGAGTTTCCGGTGGTTC+GGG | 0.316820 | 7:-70228898 | MsG0780039896.01.T01:CDS |
| GGTGGTGCTGGGAGGGAAAG+AGG | 0.321617 | 7:+70229447 | None:intergenic |
| GAATGGAGTTTCCGGTGGTT+CGG | 0.324771 | 7:-70228899 | MsG0780039896.01.T01:CDS |
| CACGGTGGTTAATAAGGTTA+TGG | 0.325823 | 7:+70229034 | None:intergenic |
| GTGGTTCCGGTGGTGGGTTT+CGG | 0.326675 | 7:-70228867 | MsG0780039896.01.T01:CDS |
| TTGGTGGTGGTGGTGCTGGG+AGG | 0.341538 | 7:+70229439 | None:intergenic |
| GAGGGATGGGTTTGTGAGGA+TGG | 0.342361 | 7:-70228635 | MsG0780039896.01.T01:CDS |
| CGTTCAGTGTCGTCACAAAA+TGG | 0.351174 | 7:-70229235 | MsG0780039896.01.T01:CDS |
| AGCGCTGCTGGTGGTGGTTC+TGG | 0.351749 | 7:-70228958 | MsG0780039896.01.T01:CDS |
| GCTATGGATTCTATGGAAAA+AGG | 0.355224 | 7:-70229117 | MsG0780039896.01.T01:CDS |
| AGAGAGAGGTTGAGAGAGAA+AGG | 0.363741 | 7:-70228702 | MsG0780039896.01.T01:CDS |
| TCTCAGATCGATAACGTTTA+CGG | 0.384665 | 7:+70229205 | None:intergenic |
| GCATTCACCATTTCACCAAT+TGG | 0.387583 | 7:+70228670 | None:intergenic |
| TTAGCGACGGGTGAAGCGTT+AGG | 0.398115 | 7:+70229264 | None:intergenic |
| TGGTGGTGGTGGTGCTGGGA+GGG | 0.406759 | 7:+70229440 | None:intergenic |
| GTATAGCTTATCAAGACTTC+TGG | 0.422110 | 7:+70228924 | None:intergenic |
| ATCTCGTTCTTCTTCTTCGT+GGG | 0.425078 | 7:-70229151 | MsG0780039896.01.T01:CDS |
| GCCGTCTTCCACCACCGTGC+TGG | 0.426135 | 7:-70229407 | MsG0780039896.01.T01:CDS |
| GTGGGTTCTCTTCAAAGCTA+TGG | 0.427834 | 7:-70229133 | MsG0780039896.01.T01:CDS |
| CGAGATGAGGTTGGTGGTGG+TGG | 0.430206 | 7:+70229429 | None:intergenic |
| TCAGAGCAGAGGTTTCTTCT+GGG | 0.439590 | 7:+70229382 | None:intergenic |
| ACCAAAACCACCCGAACCAC+CGG | 0.441911 | 7:+70228888 | None:intergenic |
| GATCTCGTTCTTCTTCTTCG+TGG | 0.446498 | 7:-70229152 | MsG0780039896.01.T01:CDS |
| TTGTGTTGGGGAAGAGAGAG+AGG | 0.447145 | 7:-70228726 | MsG0780039896.01.T01:CDS |
| AAGAGATCCAATTGGTGAAA+TGG | 0.455113 | 7:-70228677 | MsG0780039896.01.T01:CDS |
| ATCAGCAACTTCTTGCCAAT+GGG | 0.456799 | 7:+70229305 | None:intergenic |
| GTGGTGCTGGGAGGGAAAGA+GGG | 0.460638 | 7:+70229448 | None:intergenic |
| TGGTGGAACAAGGCTTGTTA+AGG | 0.460822 | 7:-70228755 | MsG0780039896.01.T01:CDS |
| GAAGAACGAGATCTCGGAAC+AGG | 0.461981 | 7:+70229162 | None:intergenic |
| TCTGGGGTCCAGCACGGTGG+TGG | 0.462923 | 7:+70229399 | None:intergenic |
| GAAGAGAGAGAGGGAGAGAG+AGG | 0.473857 | 7:-70228716 | MsG0780039896.01.T01:CDS |
| CATCGTTATCTAATGTTTCA+CGG | 0.477692 | 7:+70229016 | None:intergenic |
| CATCAGCAACTTCTTGCCAA+TGG | 0.479554 | 7:+70229304 | None:intergenic |
| GGTACGGCTGATGGTGGTGA+TGG | 0.482216 | 7:+70229474 | None:intergenic |
| CTTAGAAGCGCTGCTGGTGG+TGG | 0.482716 | 7:-70228964 | MsG0780039896.01.T01:CDS |
| TGATGATGATGATCTTTATG+AGG | 0.488793 | 7:-70228989 | MsG0780039896.01.T01:CDS |
| ATCGATTCTGTTGGAGAAGA+TGG | 0.489057 | 7:+70229498 | None:intergenic |
| GTTAAGGAGAGAGTTGTGTT+GGG | 0.490506 | 7:-70228739 | MsG0780039896.01.T01:CDS |
| TGTTAAGGAGAGAGTTGTGT+TGG | 0.492890 | 7:-70228740 | MsG0780039896.01.T01:CDS |
| TAGCGACGGGTGAAGCGTTA+GGG | 0.495224 | 7:+70229265 | None:intergenic |
| AGAGATTGAAACTATGAGAA+TGG | 0.499074 | 7:-70228587 | MsG0780039896.01.T01:CDS |
| TCTGGTTTATGCGGTGGAGA+AGG | 0.501090 | 7:+70229084 | None:intergenic |
| AAATGAACAATTCAGAATCT+GGG | 0.505187 | 7:-70228789 | MsG0780039896.01.T01:CDS |
| ACAATTCAGAATCTGGGTCT+AGG | 0.507620 | 7:-70228783 | MsG0780039896.01.T01:CDS |
| TCCAGCACGGTGGTGGAAGA+CGG | 0.513138 | 7:+70229406 | None:intergenic |
| GAGGATGGAGCAGATGAAGA+TGG | 0.514066 | 7:-70228620 | MsG0780039896.01.T01:CDS |
| TGCGCCACGCTTACACCCGT+TGG | 0.515491 | 7:+70228835 | None:intergenic |
| AGAGGGAGAGGTACGGCTGA+TGG | 0.518443 | 7:+70229465 | None:intergenic |
| GAATCTGGGTCTAGGATCAA+TGG | 0.522025 | 7:-70228775 | MsG0780039896.01.T01:CDS |
| GAGAGAGGTTGAGAGAGAAA+GGG | 0.525048 | 7:-70228701 | MsG0780039896.01.T01:CDS |
| AACCACCGGAAACTCCATTC+CGG | 0.526038 | 7:+70228902 | None:intergenic |
| GAGGAACTTAGAAGCGCTGC+TGG | 0.527570 | 7:-70228970 | MsG0780039896.01.T01:CDS |
| TGAAACTATGAGAATGGAGA+TGG | 0.531817 | 7:-70228581 | MsG0780039896.01.T01:CDS |
| GGTTAATAAGGTTATGGCCA+TGG | 0.539069 | 7:+70229040 | None:intergenic |
| GAAAGGGAAAGAGATCCAAT+TGG | 0.539477 | 7:-70228685 | MsG0780039896.01.T01:CDS |
| GAAGTCTTGATAAGCTATAC+CGG | 0.544701 | 7:-70228921 | MsG0780039896.01.T01:CDS |
| GCTGGGAGGGAAAGAGGGAG+AGG | 0.546456 | 7:+70229453 | None:intergenic |
| CGGCGAGATGAGGTTGGTGG+TGG | 0.548164 | 7:+70229426 | None:intergenic |
| GTTTCGGATTAGGATTCCAA+CGG | 0.549612 | 7:-70228851 | MsG0780039896.01.T01:CDS |
| CCTAATCATAATCATATCCA+TGG | 0.550463 | 7:-70229057 | MsG0780039896.01.T01:CDS |
| TGGATTTATCTACGATTCTG+AGG | 0.555611 | 7:+70228378 | None:intergenic |
| TTAAGGAGAGAGTTGTGTTG+GGG | 0.559890 | 7:-70228738 | MsG0780039896.01.T01:CDS |
| GGAGTTTCCGGTGGTTCGGG+TGG | 0.560032 | 7:-70228895 | MsG0780039896.01.T01:CDS |
| TTTCGGATTAGGATTCCAAC+GGG | 0.561959 | 7:-70228850 | MsG0780039896.01.T01:CDS |
| GAAGAAGAAGAACGAGATCT+CGG | 0.565455 | 7:+70229156 | None:intergenic |
| GGTTTATGCGGTGGAGAAGG+TGG | 0.567524 | 7:+70229087 | None:intergenic |
| CAAATCTCAAAGCAACCCAT+TGG | 0.579861 | 7:-70229320 | MsG0780039896.01.T01:CDS |
| GAGGGAAAGAGGGAGAGGTA+CGG | 0.580802 | 7:+70229458 | None:intergenic |
| TGCGGTGGAGAAGGTGGAGA+AGG | 0.581587 | 7:+70229093 | None:intergenic |
| GGTGTAAGCGTGGCGCAACC+CGG | 0.584893 | 7:-70228829 | MsG0780039896.01.T01:CDS |
| GTTTCTTCTGGGGTCCAGCA+CGG | 0.585059 | 7:+70229393 | None:intergenic |
| CTTGATAAGCTATACCGGAA+TGG | 0.585220 | 7:-70228916 | MsG0780039896.01.T01:CDS |
| CTAGGATCAATGGTGGAACA+AGG | 0.587512 | 7:-70228765 | MsG0780039896.01.T01:CDS |
| GTACGGCTGATGGTGGTGAT+GGG | 0.588413 | 7:+70229475 | None:intergenic |
| TGTGTTGGGGAAGAGAGAGA+GGG | 0.597007 | 7:-70228725 | MsG0780039896.01.T01:CDS |
| GGATTTATCTACGATTCTGA+GGG | 0.599119 | 7:+70228379 | None:intergenic |
| TTTCGGAGAAGAACAAGAAG+AGG | 0.600983 | 7:-70228492 | MsG0780039896.01.T01:CDS |
| TGGTGGAAGACGGCGAGATG+AGG | 0.605549 | 7:+70229416 | None:intergenic |
| CAGAGCAGAGGTTTCTTCTG+GGG | 0.606594 | 7:+70229383 | None:intergenic |
| GTTAGGGCAGCGAACAGCGA+CGG | 0.607196 | 7:+70229281 | None:intergenic |
| TACCGGAATGGAGTTTCCGG+TGG | 0.607715 | 7:-70228904 | MsG0780039896.01.T01:CDS |
| CCTAATCCGAAACCCACCAC+CGG | 0.609435 | 7:+70228861 | None:intergenic |
| GGAAGACGGCGAGATGAGGT+TGG | 0.615913 | 7:+70229420 | None:intergenic |
| GGAGCAGATGAAGATGGAGA+TGG | 0.621074 | 7:-70228614 | MsG0780039896.01.T01:CDS |
| GATTCCAACGGGTGTAAGCG+TGG | 0.625455 | 7:-70228839 | MsG0780039896.01.T01:CDS |
| AGACGGCGAGATGAGGTTGG+TGG | 0.626962 | 7:+70229423 | None:intergenic |
| TGGTGGTGGTGATGTTGCCA+TGG | 0.630730 | 7:+70229518 | None:intergenic |
| CAAGAAGAGGAAACTACGCA+AGG | 0.633025 | 7:-70228479 | MsG0780039896.01.T01:CDS |
| GGGAGAGGTACGGCTGATGG+TGG | 0.634889 | 7:+70229468 | None:intergenic |
| GGTGATGGGATCGATTCTGT+TGG | 0.635621 | 7:+70229489 | None:intergenic |
| GTAGGAGTCGATCAGAGCAG+AGG | 0.641923 | 7:+70229371 | None:intergenic |
| TCTTCTGGGGTCCAGCACGG+TGG | 0.656531 | 7:+70229396 | None:intergenic |
| TCTGGGTCTAGGATCAATGG+TGG | 0.665360 | 7:-70228772 | MsG0780039896.01.T01:CDS |
| TCTGTTGGAGAAGATGGTGG+TGG | 0.666197 | 7:+70229504 | None:intergenic |
| GAACTTAGAAGCGCTGCTGG+TGG | 0.670841 | 7:-70228967 | MsG0780039896.01.T01:CDS |
| AAGAAGAGGAAACTACGCAA+GGG | 0.675959 | 7:-70228478 | MsG0780039896.01.T01:CDS |
| GATTCTGTTGGAGAAGATGG+TGG | 0.716177 | 7:+70229501 | None:intergenic |
| CGTTATCTAATGTTTCACGG+TGG | 0.723900 | 7:+70229019 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAATGAACAATTCAGAATC+TGG | - | Chr7:70229113-70229132 | MsG0780039896.01.T01:CDS | 25.0% |
| ! | AAATGAACAATTCAGAATCT+GGG | - | Chr7:70229114-70229133 | MsG0780039896.01.T01:CDS | 25.0% |
| ! | CATGGATATGATTATGATTA+GGG | + | Chr7:70228848-70228867 | None:intergenic | 25.0% |
| !! | GATTCTGAATTGTTCATTTT+TGG | + | Chr7:70229113-70229132 | None:intergenic | 25.0% |
| !!! | TTTTGGATAGAATTTTGATC+CGG | + | Chr7:70229096-70229115 | None:intergenic | 25.0% |
| AGAGATTGAAACTATGAGAA+TGG | - | Chr7:70229316-70229335 | MsG0780039896.01.T01:CDS | 30.0% | |
| CATCGTTATCTAATGTTTCA+CGG | + | Chr7:70228890-70228909 | None:intergenic | 30.0% | |
| CCATGGATATGATTATGATT+AGG | + | Chr7:70228849-70228868 | None:intergenic | 30.0% | |
| CCTAATCATAATCATATCCA+TGG | - | Chr7:70228846-70228865 | MsG0780039896.01.T01:CDS | 30.0% | |
| TGAAATGGTGAATGCTATTA+AGG | - | Chr7:70229241-70229260 | MsG0780039896.01.T01:CDS | 30.0% | |
| ! | TGAATGCTATTAAGGTTTTG+AGG | - | Chr7:70229249-70229268 | MsG0780039896.01.T01:CDS | 30.0% |
| ! | TGATGATGATGATCTTTATG+AGG | - | Chr7:70228914-70228933 | MsG0780039896.01.T01:CDS | 30.0% |
| ! | TGATTATGATTAGGGTTTTC+TGG | + | Chr7:70228840-70228859 | None:intergenic | 30.0% |
| !! | GAATGCTATTAAGGTTTTGA+GGG | - | Chr7:70229250-70229269 | MsG0780039896.01.T01:CDS | 30.0% |
| !! | TTTGGATAGAATTTTGATCC+GGG | + | Chr7:70229095-70229114 | None:intergenic | 30.0% |
| AAGAGATCCAATTGGTGAAA+TGG | - | Chr7:70229226-70229245 | MsG0780039896.01.T01:CDS | 35.0% | |
| ATGTTTCACGGTGGTTAATA+AGG | + | Chr7:70228878-70228897 | None:intergenic | 35.0% | |
| CTTCAAAGCTATGGATTCTA+TGG | - | Chr7:70228779-70228798 | MsG0780039896.01.T01:CDS | 35.0% | |
| GAAGTCTTGATAAGCTATAC+CGG | - | Chr7:70228982-70229001 | MsG0780039896.01.T01:CDS | 35.0% | |
| GCTATGGATTCTATGGAAAA+AGG | - | Chr7:70228786-70228805 | MsG0780039896.01.T01:CDS | 35.0% | |
| GTATAGCTTATCAAGACTTC+TGG | + | Chr7:70228982-70229001 | None:intergenic | 35.0% | |
| TCTCAGATCGATAACGTTTA+CGG | + | Chr7:70228701-70228720 | None:intergenic | 35.0% | |
| TGAAACTATGAGAATGGAGA+TGG | - | Chr7:70229322-70229341 | MsG0780039896.01.T01:CDS | 35.0% | |
| !!! | CAAGAGAGTACCATTTTTCA+CGG | + | Chr7:70228557-70228576 | None:intergenic | 35.0% |
| !!! | CTATTAAGGTTTTGAGGGAT+GGG | - | Chr7:70229255-70229274 | MsG0780039896.01.T01:CDS | 35.0% |
| !!! | TTAGGGTTTTCTGGTTTATG+CGG | + | Chr7:70228831-70228850 | None:intergenic | 35.0% |
| AAGAAGAGGAAACTACGCAA+GGG | - | Chr7:70229425-70229444 | MsG0780039896.01.T01:CDS | 40.0% | |
| ACAATTCAGAATCTGGGTCT+AGG | - | Chr7:70229120-70229139 | MsG0780039896.01.T01:CDS | 40.0% | |
| ATCAGCAACTTCTTGCCAAT+GGG | + | Chr7:70228601-70228620 | None:intergenic | 40.0% | |
| ATCTCGTTCTTCTTCTTCGT+GGG | - | Chr7:70228752-70228771 | MsG0780039896.01.T01:CDS | 40.0% | |
| CAAATCTCAAAGCAACCCAT+TGG | - | Chr7:70228583-70228602 | MsG0780039896.01.T01:CDS | 40.0% | |
| CACGGTGGTTAATAAGGTTA+TGG | + | Chr7:70228872-70228891 | None:intergenic | 40.0% | |
| CGTGAAAAATGGTACTCTCT+TGG | - | Chr7:70228555-70228574 | MsG0780039896.01.T01:CDS | 40.0% | |
| CGTTATCTAATGTTTCACGG+TGG | + | Chr7:70228887-70228906 | None:intergenic | 40.0% | |
| CTTGATAAGCTATACCGGAA+TGG | - | Chr7:70228987-70229006 | MsG0780039896.01.T01:CDS | 40.0% | |
| GAAAGGGAAAGAGATCCAAT+TGG | - | Chr7:70229218-70229237 | MsG0780039896.01.T01:CDS | 40.0% | |
| GAAGAAGAAGAACGAGATCT+CGG | + | Chr7:70228750-70228769 | None:intergenic | 40.0% | |
| GCATTCACCATTTCACCAAT+TGG | + | Chr7:70229236-70229255 | None:intergenic | 40.0% | |
| GGTTAATAAGGTTATGGCCA+TGG | + | Chr7:70228866-70228885 | None:intergenic | 40.0% | |
| GTTAAGGAGAGAGTTGTGTT+GGG | - | Chr7:70229164-70229183 | MsG0780039896.01.T01:CDS | 40.0% | |
| TGTTAAGGAGAGAGTTGTGT+TGG | - | Chr7:70229163-70229182 | MsG0780039896.01.T01:CDS | 40.0% | |
| TTAAGGAGAGAGTTGTGTTG+GGG | - | Chr7:70229165-70229184 | MsG0780039896.01.T01:CDS | 40.0% | |
| TTTCGGAGAAGAACAAGAAG+AGG | - | Chr7:70229411-70229430 | MsG0780039896.01.T01:CDS | 40.0% | |
| ! | AGCTTTTGCGAAAGCTGTTT+CGG | - | Chr7:70229394-70229413 | MsG0780039896.01.T01:CDS | 40.0% |
| ! | ATCGATTCTGTTGGAGAAGA+TGG | + | Chr7:70228408-70228427 | None:intergenic | 40.0% |
| ! | CATTTTGTGACGACACTGAA+CGG | + | Chr7:70228670-70228689 | None:intergenic | 40.0% |
| ! | GAAGCGTACTGAGATGATTT+TGG | - | Chr7:70229349-70229368 | MsG0780039896.01.T01:CDS | 40.0% |
| ! | GTTTCGGATTAGGATTCCAA+CGG | - | Chr7:70229052-70229071 | MsG0780039896.01.T01:CDS | 40.0% |
| ! | TTTCGGATTAGGATTCCAAC+GGG | - | Chr7:70229053-70229072 | MsG0780039896.01.T01:CDS | 40.0% |
| !! | AGAGTACCATTTTTCACGGT+AGG | + | Chr7:70228553-70228572 | None:intergenic | 40.0% |
| !!! | GCTATTAAGGTTTTGAGGGA+TGG | - | Chr7:70229254-70229273 | MsG0780039896.01.T01:CDS | 40.0% |
| AGAGAGAGGTTGAGAGAGAA+AGG | - | Chr7:70229201-70229220 | MsG0780039896.01.T01:CDS | 45.0% | |
| ATCAGAGCAGAGGTTTCTTC+TGG | + | Chr7:70228525-70228544 | None:intergenic | 45.0% | |
| CAAGAAGAGGAAACTACGCA+AGG | - | Chr7:70229424-70229443 | MsG0780039896.01.T01:CDS | 45.0% | |
| CATCAGCAACTTCTTGCCAA+TGG | + | Chr7:70228602-70228621 | None:intergenic | 45.0% | |
| CGTTCAGTGTCGTCACAAAA+TGG | - | Chr7:70228668-70228687 | MsG0780039896.01.T01:CDS | 45.0% | |
| CTATACCGGAATGGAGTTTC+CGG | - | Chr7:70228996-70229015 | MsG0780039896.01.T01:CDS | 45.0% | |
| GAGAGAGGTTGAGAGAGAAA+GGG | - | Chr7:70229202-70229221 | MsG0780039896.01.T01:CDS | 45.0% | |
| GATCTCGTTCTTCTTCTTCG+TGG | - | Chr7:70228751-70228770 | MsG0780039896.01.T01:CDS | 45.0% | |
| GATTCTGTTGGAGAAGATGG+TGG | + | Chr7:70228405-70228424 | None:intergenic | 45.0% | |
| GTGGGTTCTCTTCAAAGCTA+TGG | - | Chr7:70228770-70228789 | MsG0780039896.01.T01:CDS | 45.0% | |
| TCAGAGCAGAGGTTTCTTCT+GGG | + | Chr7:70228524-70228543 | None:intergenic | 45.0% | |
| TCGACTCCTACCGTGAAAAA+TGG | - | Chr7:70228544-70228563 | MsG0780039896.01.T01:CDS | 45.0% | |
| ! | CTAGGATCAATGGTGGAACA+AGG | - | Chr7:70229138-70229157 | MsG0780039896.01.T01:CDS | 45.0% |
| ! | GAATCTGGGTCTAGGATCAA+TGG | - | Chr7:70229128-70229147 | MsG0780039896.01.T01:CDS | 45.0% |
| !! | TGGTGGAACAAGGCTTGTTA+AGG | - | Chr7:70229148-70229167 | MsG0780039896.01.T01:CDS | 45.0% |
| !! | TTTTGAGGGATGGGTTTGTG+AGG | - | Chr7:70229264-70229283 | MsG0780039896.01.T01:CDS | 45.0% |
| !!! | TGATTTTGGAGTCTCAGCAG+AGG | - | Chr7:70229363-70229382 | MsG0780039896.01.T01:CDS | 45.0% |
| AACCACCGGAAACTCCATTC+CGG | + | Chr7:70229004-70229023 | None:intergenic | 50.0% | |
| AATGGAGTTTCCGGTGGTTC+GGG | - | Chr7:70229005-70229024 | MsG0780039896.01.T01:CDS | 50.0% | |
| CAGAGCAGAGGTTTCTTCTG+GGG | + | Chr7:70228523-70228542 | None:intergenic | 50.0% | |
| GAAGAACGAGATCTCGGAAC+AGG | + | Chr7:70228744-70228763 | None:intergenic | 50.0% | |
| GAATGGAGTTTCCGGTGGTT+CGG | - | Chr7:70229004-70229023 | MsG0780039896.01.T01:CDS | 50.0% | |
| GAGGATGGAGCAGATGAAGA+TGG | - | Chr7:70229283-70229302 | MsG0780039896.01.T01:CDS | 50.0% | |
| GGAGCAGATGAAGATGGAGA+TGG | - | Chr7:70229289-70229308 | MsG0780039896.01.T01:CDS | 50.0% | |
| TGTGTTGGGGAAGAGAGAGA+GGG | - | Chr7:70229178-70229197 | MsG0780039896.01.T01:CDS | 50.0% | |
| TTGTGTTGGGGAAGAGAGAG+AGG | - | Chr7:70229177-70229196 | MsG0780039896.01.T01:CDS | 50.0% | |
| ! | TCTGGGTCTAGGATCAATGG+TGG | - | Chr7:70229131-70229150 | MsG0780039896.01.T01:CDS | 50.0% |
| ! | TCTGGTTTATGCGGTGGAGA+AGG | + | Chr7:70228822-70228841 | None:intergenic | 50.0% |
| ! | TCTGTTGGAGAAGATGGTGG+TGG | + | Chr7:70228402-70228421 | None:intergenic | 50.0% |
| !! | CTGAACGGCAGTTTTAGCGA+CGG | + | Chr7:70228655-70228674 | None:intergenic | 50.0% |
| !! | GGTGATGGGATCGATTCTGT+TGG | + | Chr7:70228417-70228436 | None:intergenic | 50.0% |
| !! | TGAACGGCAGTTTTAGCGAC+GGG | + | Chr7:70228654-70228673 | None:intergenic | 50.0% |
| !!! | GGGTTTTCTGGTTTATGCGG+TGG | + | Chr7:70228828-70228847 | None:intergenic | 50.0% |
| ACCAAAACCACCCGAACCAC+CGG | + | Chr7:70229018-70229037 | None:intergenic | 55.0% | |
| CCTAATCCGAAACCCACCAC+CGG | + | Chr7:70229045-70229064 | None:intergenic | 55.0% | |
| GAAGAGAGAGAGGGAGAGAG+AGG | - | Chr7:70229187-70229206 | MsG0780039896.01.T01:CDS | 55.0% | |
| GAGGGAAAGAGGGAGAGGTA+CGG | + | Chr7:70228448-70228467 | None:intergenic | 55.0% | |
| GATTCCAACGGGTGTAAGCG+TGG | - | Chr7:70229064-70229083 | MsG0780039896.01.T01:CDS | 55.0% | |
| GGTTTATGCGGTGGAGAAGG+TGG | + | Chr7:70228819-70228838 | None:intergenic | 55.0% | |
| GTAGGAGTCGATCAGAGCAG+AGG | + | Chr7:70228535-70228554 | None:intergenic | 55.0% | |
| TACCGGAATGGAGTTTCCGG+TGG | - | Chr7:70228999-70229018 | MsG0780039896.01.T01:CDS | 55.0% | |
| ! | GAGGGATGGGTTTGTGAGGA+TGG | - | Chr7:70229268-70229287 | MsG0780039896.01.T01:CDS | 55.0% |
| ! | TAGCGACGGGTGAAGCGTTA+GGG | + | Chr7:70228641-70228660 | None:intergenic | 55.0% |
| ! | TTAGCGACGGGTGAAGCGTT+AGG | + | Chr7:70228642-70228661 | None:intergenic | 55.0% |
| !! | GAACTTAGAAGCGCTGCTGG+TGG | - | Chr7:70228936-70228955 | MsG0780039896.01.T01:CDS | 55.0% |
| !! | GAGGAACTTAGAAGCGCTGC+TGG | - | Chr7:70228933-70228952 | MsG0780039896.01.T01:CDS | 55.0% |
| !! | GTACGGCTGATGGTGGTGAT+GGG | + | Chr7:70228431-70228450 | None:intergenic | 55.0% |
| !! | GTTTCTTCTGGGGTCCAGCA+CGG | + | Chr7:70228513-70228532 | None:intergenic | 55.0% |
| !! | GTTTTGGTGGTTCCGGTGGT+GGG | - | Chr7:70229030-70229049 | MsG0780039896.01.T01:CDS | 55.0% |
| !!! | TCGGGTGGTTTTGGTGGTTC+CGG | - | Chr7:70229023-70229042 | MsG0780039896.01.T01:CDS | 55.0% |
| AGACGGCGAGATGAGGTTGG+TGG | + | Chr7:70228483-70228502 | None:intergenic | 60.0% | |
| GGAAGACGGCGAGATGAGGT+TGG | + | Chr7:70228486-70228505 | None:intergenic | 60.0% | |
| GTTAGGGCAGCGAACAGCGA+CGG | + | Chr7:70228625-70228644 | None:intergenic | 60.0% | |
| TGCGGTGGAGAAGGTGGAGA+AGG | + | Chr7:70228813-70228832 | None:intergenic | 60.0% | |
| TGGTGGAAGACGGCGAGATG+AGG | + | Chr7:70228490-70228509 | None:intergenic | 60.0% | |
| ! | AGAGGGAGAGGTACGGCTGA+TGG | + | Chr7:70228441-70228460 | None:intergenic | 60.0% |
| ! | GTGGTGCTGGGAGGGAAAGA+GGG | + | Chr7:70228458-70228477 | None:intergenic | 60.0% |
| !! | AGGTTGGTGGTGGTGGTGCT+GGG | + | Chr7:70228470-70228489 | None:intergenic | 60.0% |
| !! | CCGGTGGTGGGTTTCGGATT+AGG | - | Chr7:70229042-70229061 | MsG0780039896.01.T01:CDS | 60.0% |
| !! | CGAGATGAGGTTGGTGGTGG+TGG | + | Chr7:70228477-70228496 | None:intergenic | 60.0% |
| !! | CTTAGAAGCGCTGCTGGTGG+TGG | - | Chr7:70228939-70228958 | MsG0780039896.01.T01:CDS | 60.0% |
| !! | GCTGGTGGTGGTTCTGGTTC+TGG | - | Chr7:70228951-70228970 | MsG0780039896.01.T01:CDS | 60.0% |
| !! | GGTACGGCTGATGGTGGTGA+TGG | + | Chr7:70228432-70228451 | None:intergenic | 60.0% |
| !! | GGTTTTGGTGGTTCCGGTGG+TGG | - | Chr7:70229029-70229048 | MsG0780039896.01.T01:CDS | 60.0% |
| !! | GTGGTTCCGGTGGTGGGTTT+CGG | - | Chr7:70229036-70229055 | MsG0780039896.01.T01:CDS | 60.0% |
| !! | TCCAGCACGGTGGTGGAAGA+CGG | + | Chr7:70228500-70228519 | None:intergenic | 60.0% |
| !! | TCCGGTGGTTCGGGTGGTTT+TGG | - | Chr7:70229014-70229033 | MsG0780039896.01.T01:CDS | 60.0% |
| !!! | GGTGGTTCGGGTGGTTTTGG+TGG | - | Chr7:70229017-70229036 | MsG0780039896.01.T01:CDS | 60.0% |
| !!! | GGTGGTTTTGGTGGTTCCGG+TGG | - | Chr7:70229026-70229045 | MsG0780039896.01.T01:CDS | 60.0% |
| GCTGGGAGGGAAAGAGGGAG+AGG | + | Chr7:70228453-70228472 | None:intergenic | 65.0% | |
| GGTGTAAGCGTGGCGCAACC+CGG | - | Chr7:70229074-70229093 | MsG0780039896.01.T01:CDS | 65.0% | |
| TGCGCCACGCTTACACCCGT+TGG | + | Chr7:70229071-70229090 | None:intergenic | 65.0% | |
| ! | GGAGTTTCCGGTGGTTCGGG+TGG | - | Chr7:70229008-70229027 | MsG0780039896.01.T01:CDS | 65.0% |
| ! | GGGAGAGGTACGGCTGATGG+TGG | + | Chr7:70228438-70228457 | None:intergenic | 65.0% |
| ! | GGTGGTGCTGGGAGGGAAAG+AGG | + | Chr7:70228459-70228478 | None:intergenic | 65.0% |
| !! | AGCGCTGCTGGTGGTGGTTC+TGG | - | Chr7:70228945-70228964 | MsG0780039896.01.T01:CDS | 65.0% |
| !! | CGGCGAGATGAGGTTGGTGG+TGG | + | Chr7:70228480-70228499 | None:intergenic | 65.0% |
| !! | GAGGTTGGTGGTGGTGGTGC+TGG | + | Chr7:70228471-70228490 | None:intergenic | 65.0% |
| !! | TCTTCTGGGGTCCAGCACGG+TGG | + | Chr7:70228510-70228529 | None:intergenic | 65.0% |
| !! | TGGTGGTGGTGGTGCTGGGA+GGG | + | Chr7:70228466-70228485 | None:intergenic | 65.0% |
| !! | TTGGTGGTGGTGGTGCTGGG+AGG | + | Chr7:70228467-70228486 | None:intergenic | 65.0% |
| GCCGTCTTCCACCACCGTGC+TGG | - | Chr7:70228496-70228515 | MsG0780039896.01.T01:CDS | 70.0% | |
| ! | TCTGGGGTCCAGCACGGTGG+TGG | + | Chr7:70228507-70228526 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr7 | gene | 70228387 | 70229538 | 70228387 | ID=MsG0780039896.01;Name=MsG0780039896.01 |
| Chr7 | mRNA | 70228387 | 70229538 | 70228387 | ID=MsG0780039896.01.T01;Parent=MsG0780039896.01;Name=MsG0780039896.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|383 |
| Chr7 | exon | 70228387 | 70229538 | 70228387 | ID=MsG0780039896.01.T01:exon:13090;Parent=MsG0780039896.01.T01 |
| Chr7 | CDS | 70228387 | 70229538 | 70228387 | ID=MsG0780039896.01.T01:cds;Parent=MsG0780039896.01.T01 |
| Gene Sequence |
| Protein sequence |
