AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0180005708.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0180005708.01.T01 MTR_1g105890 81.498 454 42 6 12 425 94 545 0.0 593
MsG0180005708.01.T01 MTR_5g005430 41.553 438 198 17 17 423 148 558 1.70e-50 179
MsG0180005708.01.T03 MTR_1g105890 91.566 249 21 0 3 251 297 545 3.07e-153 437
MsG0180005708.01.T03 MTR_5g005430 39.924 263 110 10 6 249 325 558 1.39e-28 113
MsG0180005708.01.T02 MTR_1g105890 85.492 193 16 1 1 181 353 545 4.31e-105 312
MsG0180005708.01.T02 MTR_5g005430 44.444 180 79 6 10 179 390 558 7.43e-26 103
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 78 sgRNAs with CRISPR-Local

Find 89 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTAACGTGTCCAGTAATT+TGG 0.180302 1:-95236106 MsG0180005708.01.T01:intron
GTTTCTGTTAAACCTGAAAA+TGG 0.226292 1:-95236210 MsG0180005708.01.T01:CDS
TAGCACTGAAACAAGTAATT+TGG 0.256562 1:-95236685 MsG0180005708.01.T01:CDS
CGCATTTCTATCCAAATTAC+TGG 0.276741 1:+95236095 None:intergenic
TTGGCTATCGGGGTTTGTTT+TGG 0.298402 1:+95236473 None:intergenic
TCAAAACATACATGAGGATA+TGG 0.336233 1:-95235869 MsG0180005708.01.T01:CDS
CTTAAATCCAATTGGCTATC+GGG 0.355327 1:+95236462 None:intergenic
ACAGTTAATACAACAATTAC+TGG 0.363960 1:-95236312 MsG0180005708.01.T01:CDS
AGACAAGGAGGATGAGGAAA+AGG 0.369456 1:-95236805 MsG0180005708.01.T01:CDS
AACTGATCTTGACACGTTGC+CGG 0.380622 1:-95235836 MsG0180005708.01.T01:CDS
ATCATTCTGATGAAAGTAAC+AGG 0.386411 1:-95236605 MsG0180005708.01.T01:CDS
ACACGACACTATTGATTCTT+CGG 0.386613 1:-95235896 MsG0180005708.01.T01:CDS
GACAAGGAGGATGAGGAAAA+GGG 0.393398 1:-95236804 MsG0180005708.01.T01:CDS
TTTCCTTCATTTCTAATATC+CGG 0.393946 1:+95235817 None:intergenic
TCAAAATGATTCTGATTTGA+AGG 0.420588 1:-95236580 MsG0180005708.01.T01:CDS
GATTACTGCTTAAATCCAAT+TGG 0.439581 1:+95236454 None:intergenic
TAAGCACGGAGCCGAAGAGC+AGG 0.458636 1:-95236991 MsG0180005708.01.T01:CDS
ATTACCAGGTAGGTTTCCTT+CGG 0.462002 1:+95236242 None:intergenic
AGTGAAGAGGTGGAAGATGA+AGG 0.462568 1:-95236951 MsG0180005708.01.T01:CDS
GATGACACGTCAAGTTCATC+TGG 0.468805 1:-95236384 MsG0180005708.01.T01:CDS
AACAAACCCCGATAGCCAAT+TGG 0.479844 1:-95236469 MsG0180005708.01.T01:CDS
GCTTAAATCCAATTGGCTAT+CGG 0.489720 1:+95236461 None:intergenic
GTGAAGACAACGTGCATGAA+GGG 0.494786 1:-95237040 MsG0180005708.01.T01:intron
TCAAATGCAAGCTGGTAAAG+AGG 0.496779 1:-95236526 MsG0180005708.01.T01:CDS
ACAAGGAGGATGAGGAAAAG+GGG 0.499091 1:-95236803 MsG0180005708.01.T01:CDS
AGAAGAGGGTGATGATGAGA+CGG 0.505523 1:-95236835 MsG0180005708.01.T01:CDS
TGATCGTGATGATGAGGTTG+TGG 0.514590 1:-95236877 MsG0180005708.01.T01:CDS
AAATGCGAGCTCTGATACCA+CGG 0.515293 1:-95236079 MsG0180005708.01.T01:intron
TTGCCGGATATTAGAAATGA+AGG 0.515907 1:-95235820 MsG0180005708.01.T01:CDS
AGCAGTAACTCGACAGGCAC+TGG 0.519435 1:-95236408 MsG0180005708.01.T01:CDS
ACCACGACAATCATGAAGCT+CGG 0.520214 1:-95236767 MsG0180005708.01.T01:CDS
CCACGACAATCATGAAGCTC+GGG 0.521569 1:-95236766 MsG0180005708.01.T01:CDS
AGAGAAAGACAAAGAAGAAG+AGG 0.523414 1:-95236850 MsG0180005708.01.T01:CDS
TGACAGTTTGTCTAATGAAA+CGG 0.525886 1:-95236496 MsG0180005708.01.T01:CDS
CCCGAGCTTCATGATTGTCG+TGG 0.527799 1:+95236766 None:intergenic
TGAAAGCAAAAGTGAAGAGG+TGG 0.527884 1:-95236961 MsG0180005708.01.T01:CDS
ATGCAAGCTGGTAAAGAGGC+TGG 0.528436 1:-95236522 MsG0180005708.01.T01:CDS
TACCGAGGATGAGATGTTCA+AGG 0.534057 1:-95235992 MsG0180005708.01.T01:CDS
ACGGAAAGTGATAAATCTAA+AGG 0.537549 1:-95236060 MsG0180005708.01.T01:intron
GAGAAAGACAAAGAAGAAGA+GGG 0.543819 1:-95236849 MsG0180005708.01.T01:CDS
TTTAGATTTATCACTTTCCG+TGG 0.547850 1:+95236062 None:intergenic
CAAGGAGGATGAGGAAAAGG+GGG 0.549163 1:-95236802 MsG0180005708.01.T01:CDS
TGAAAAGCACGAGGAAGAAG+AGG 0.550031 1:-95237159 MsG0180005708.01.T01:CDS
GAAGAGGTGGAAGATGAAGG+AGG 0.566940 1:-95236948 MsG0180005708.01.T01:CDS
GAATGAAGACAAGGAGGATG+AGG 0.567800 1:-95236811 MsG0180005708.01.T01:CDS
GGAGATATAAAGCAAACAGA+TGG 0.568088 1:-95236291 MsG0180005708.01.T01:CDS
ACCCTTGAACATCTCATCCT+CGG 0.573116 1:+95235990 None:intergenic
CAATTGAATCATTACCAGGT+AGG 0.578816 1:+95236232 None:intergenic
TTAAATCCAATTGGCTATCG+GGG 0.580558 1:+95236463 None:intergenic
ATCATGTGCCACAGCACTAG+AGG 0.584624 1:+95236719 None:intergenic
GCACGGAGCCGAAGAGCAGG+AGG 0.585830 1:-95236988 MsG0180005708.01.T01:CDS
GACGCAAGCAGTAACTCGAC+AGG 0.588343 1:-95236414 MsG0180005708.01.T01:CDS
CACGATGAACAACAACAAGA+AGG 0.590155 1:-95237097 MsG0180005708.01.T01:intron
TCTGATTTGAAGGTTACAGA+AGG 0.593375 1:-95236570 MsG0180005708.01.T01:CDS
AGCTCGGGAAGAACATTACA+AGG 0.597038 1:-95236751 MsG0180005708.01.T01:CDS
AAATGAAAGCAAAAGTGAAG+AGG 0.597712 1:-95236964 MsG0180005708.01.T01:CDS
AGTGAAGACAACGTGCATGA+AGG 0.602024 1:-95237041 MsG0180005708.01.T01:intron
ATTTCCGAAGGAAACCTACC+TGG 0.602219 1:-95236246 MsG0180005708.01.T01:CDS
GAAACAATTGAATCATTACC+AGG 0.603201 1:+95236228 None:intergenic
ATCTAAAATTTCAGTGACAG+AGG 0.616818 1:+95235927 None:intergenic
TGTTAAACCTGAAAATGGAG+TGG 0.618379 1:-95236205 MsG0180005708.01.T01:CDS
ACCGAGGATGAGATGTTCAA+GGG 0.630659 1:-95235991 MsG0180005708.01.T01:CDS
GATGAAGAAGAAAATAAGCA+CGG 0.630678 1:-95237005 MsG0180005708.01.T01:CDS
TGATGATGCCTCTAGTGCTG+TGG 0.631001 1:-95236727 MsG0180005708.01.T01:CDS
CATACATGAGGATATGGCAA+AGG 0.631044 1:-95235863 MsG0180005708.01.T01:CDS
ACAGAAGGTGAATTGACAGA+TGG 0.633370 1:-95236555 MsG0180005708.01.T01:CDS
TCAGAATACTGACGCTACCG+AGG 0.636306 1:-95236007 MsG0180005708.01.T01:CDS
AAGGAGGATGAGGAAAAGGG+GGG 0.640271 1:-95236801 MsG0180005708.01.T01:CDS
ACTCAAACAAGTGAAACCGA+TGG 0.642931 1:-95235964 MsG0180005708.01.T01:intron
AGTGGCAGTAAAATTTCCGA+AGG 0.656357 1:-95236258 MsG0180005708.01.T01:CDS
AGTGCATTAGAGAAGACGAT+CGG 0.671772 1:-95236150 MsG0180005708.01.T01:CDS
AAATGATCATGAGAAATCAG+AGG 0.674111 1:-95236907 MsG0180005708.01.T01:CDS
GGATACTCAAAACATACATG+AGG 0.674707 1:-95235875 MsG0180005708.01.T01:CDS
AGATAATGATCGTGATGATG+AGG 0.692551 1:-95236883 MsG0180005708.01.T01:CDS
TGAGACGGAGAATGAAGACA+AGG 0.700440 1:-95236820 MsG0180005708.01.T01:CDS
ACAGATGGATTAGAGCAGAG+TGG 0.713151 1:-95236276 MsG0180005708.01.T01:CDS
AGATAAGAATGAAAAGCACG+AGG 0.713312 1:-95237168 None:intergenic
GACGGAGAATGAAGACAAGG+AGG 0.719650 1:-95236817 MsG0180005708.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! ACAGTTAATACAACAATTAC+TGG - Chr1:95236637-95236656 MsG0180005708.01.T01:CDS 25.0%
! TTTCCTTCATTTCTAATATC+CGG + Chr1:95237135-95237154 None:intergenic 25.0%
!! TCAAAATGATTCTGATTTGA+AGG - Chr1:95236369-95236388 MsG0180005708.01.T01:CDS 25.0%
AAATGAAAGCAAAAGTGAAG+AGG - Chr1:95235985-95236004 MsG0180005708.01.T01:CDS 30.0%
AAATGATCATGAGAAATCAG+AGG - Chr1:95236042-95236061 MsG0180005708.01.T01:CDS 30.0%
ACGGAAAGTGATAAATCTAA+AGG - Chr1:95236889-95236908 MsG0180005708.01.T01:CDS 30.0%
ATCATTCTGATGAAAGTAAC+AGG - Chr1:95236344-95236363 MsG0180005708.01.T01:CDS 30.0%
GAAACAATTGAATCATTACC+AGG + Chr1:95236724-95236743 None:intergenic 30.0%
GATGAAGAAGAAAATAAGCA+CGG - Chr1:95235944-95235963 MsG0180005708.01.T01:intron 30.0%
GATTACTGCTTAAATCCAAT+TGG + Chr1:95236498-95236517 None:intergenic 30.0%
GTTTCTGTTAAACCTGAAAA+TGG - Chr1:95236739-95236758 MsG0180005708.01.T01:CDS 30.0%
TCAAAACATACATGAGGATA+TGG - Chr1:95237080-95237099 MsG0180005708.01.T01:intron 30.0%
TGACAGTTTGTCTAATGAAA+CGG - Chr1:95236453-95236472 MsG0180005708.01.T01:CDS 30.0%
TTTAGATTTATCACTTTCCG+TGG + Chr1:95236890-95236909 None:intergenic 30.0%
! ATCTAAAATTTCAGTGACAG+AGG + Chr1:95237025-95237044 None:intergenic 30.0%
! TAGCACTGAAACAAGTAATT+TGG - Chr1:95236264-95236283 MsG0180005708.01.T01:CDS 30.0%
AGAGAAAGACAAAGAAGAAG+AGG - Chr1:95236099-95236118 MsG0180005708.01.T01:intron 35.0%
CAATTGAATCATTACCAGGT+AGG + Chr1:95236720-95236739 None:intergenic 35.0%
CGCATTTCTATCCAAATTAC+TGG + Chr1:95236857-95236876 None:intergenic 35.0%
CTGAAAAATCTTCGACTCTT+GGG - Chr1:95236773-95236792 MsG0180005708.01.T01:CDS 35.0%
CTTAAATCCAATTGGCTATC+GGG + Chr1:95236490-95236509 None:intergenic 35.0%
GAGAAAGACAAAGAAGAAGA+GGG - Chr1:95236100-95236119 MsG0180005708.01.T01:intron 35.0%
GCTTAAATCCAATTGGCTAT+CGG + Chr1:95236491-95236510 None:intergenic 35.0%
GGAGATATAAAGCAAACAGA+TGG - Chr1:95236658-95236677 MsG0180005708.01.T01:CDS 35.0%
GGATACTCAAAACATACATG+AGG - Chr1:95237074-95237093 MsG0180005708.01.T01:intron 35.0%
TGAAAAATCTTCGACTCTTG+GGG - Chr1:95236774-95236793 MsG0180005708.01.T01:CDS 35.0%
TGTTAAACCTGAAAATGGAG+TGG - Chr1:95236744-95236763 MsG0180005708.01.T01:CDS 35.0%
TGTTAACGTGTCCAGTAATT+TGG - Chr1:95236843-95236862 MsG0180005708.01.T01:CDS 35.0%
TTAAATCCAATTGGCTATCG+GGG + Chr1:95236489-95236508 None:intergenic 35.0%
TTGCCGGATATTAGAAATGA+AGG - Chr1:95237129-95237148 MsG0180005708.01.T01:CDS 35.0%
! AGATAATGATCGTGATGATG+AGG - Chr1:95236066-95236085 MsG0180005708.01.T01:intron 35.0%
! ATTTTGAGCATGATCAGACT+CGG + Chr1:95236614-95236633 None:intergenic 35.0%
! TCTGATTTGAAGGTTACAGA+AGG - Chr1:95236379-95236398 MsG0180005708.01.T01:CDS 35.0%
!! ACACGACACTATTGATTCTT+CGG - Chr1:95237053-95237072 MsG0180005708.01.T01:intron 35.0%
!! GGAATTTTTCAAATGCAAGC+TGG - Chr1:95236415-95236434 MsG0180005708.01.T01:CDS 35.0%
ACAACAACAAGAAGGAGAGA+AGG - Chr1:95235860-95235879 MsG0180005708.01.T01:CDS 40.0%
ACAGAAGGTGAATTGACAGA+TGG - Chr1:95236394-95236413 MsG0180005708.01.T01:CDS 40.0%
ACTCAAACAAGTGAAACCGA+TGG - Chr1:95236985-95237004 MsG0180005708.01.T01:CDS 40.0%
AGTGCATTAGAGAAGACGAT+CGG - Chr1:95236799-95236818 MsG0180005708.01.T01:CDS 40.0%
AGTGGCAGTAAAATTTCCGA+AGG - Chr1:95236691-95236710 MsG0180005708.01.T01:CDS 40.0%
ATTACCAGGTAGGTTTCCTT+CGG + Chr1:95236710-95236729 None:intergenic 40.0%
CACGATGAACAACAACAAGA+AGG - Chr1:95235852-95235871 MsG0180005708.01.T01:CDS 40.0%
CATACATGAGGATATGGCAA+AGG - Chr1:95237086-95237105 MsG0180005708.01.T01:intron 40.0%
CCTGAAAAATCTTCGACTCT+TGG - Chr1:95236772-95236791 MsG0180005708.01.T01:CDS 40.0%
TCAAATGCAAGCTGGTAAAG+AGG - Chr1:95236423-95236442 MsG0180005708.01.T01:CDS 40.0%
TGAAAGCAAAAGTGAAGAGG+TGG - Chr1:95235988-95236007 MsG0180005708.01.T01:CDS 40.0%
! CCAAGAGTCGAAGATTTTTC+AGG + Chr1:95236775-95236794 None:intergenic 40.0%
! GGATGTGTCTGATTTTCCAT+CGG + Chr1:95237004-95237023 None:intergenic 40.0%
! TGATGAGTTGTCTCGTTTTC+AGG + Chr1:95236328-95236347 None:intergenic 40.0%
! TTCATTTTCCTCCTGCTCTT+CGG + Chr1:95235972-95235991 None:intergenic 40.0%
!!! TGTCTCGTTTTCAGGTTTTC+TGG + Chr1:95236320-95236339 None:intergenic 40.0%
AACAAACCCCGATAGCCAAT+TGG - Chr1:95236480-95236499 MsG0180005708.01.T01:CDS 45.0%
AACTGATCTTGACACGTTGC+CGG - Chr1:95237113-95237132 MsG0180005708.01.T01:CDS 45.0%
ACAAGGAGGATGAGGAAAAG+GGG - Chr1:95236146-95236165 MsG0180005708.01.T01:CDS 45.0%
ACCACGACAATCATGAAGCT+CGG - Chr1:95236182-95236201 MsG0180005708.01.T01:CDS 45.0%
ACCCTTGAACATCTCATCCT+CGG + Chr1:95236962-95236981 None:intergenic 45.0%
ACCGAGGATGAGATGTTCAA+GGG - Chr1:95236958-95236977 MsG0180005708.01.T01:CDS 45.0%
AGACAAGGAGGATGAGGAAA+AGG - Chr1:95236144-95236163 MsG0180005708.01.T01:CDS 45.0%
AGCTCGGGAAGAACATTACA+AGG - Chr1:95236198-95236217 MsG0180005708.01.T01:CDS 45.0%
AGTGAAGACAACGTGCATGA+AGG - Chr1:95235908-95235927 MsG0180005708.01.T01:CDS 45.0%
AGTGAAGAGGTGGAAGATGA+AGG - Chr1:95235998-95236017 MsG0180005708.01.T01:CDS 45.0%
ATTTCCGAAGGAAACCTACC+TGG - Chr1:95236703-95236722 MsG0180005708.01.T01:CDS 45.0%
GAATGAAGACAAGGAGGATG+AGG - Chr1:95236138-95236157 MsG0180005708.01.T01:CDS 45.0%
GACAAGGAGGATGAGGAAAA+GGG - Chr1:95236145-95236164 MsG0180005708.01.T01:CDS 45.0%
GATGACACGTCAAGTTCATC+TGG - Chr1:95236565-95236584 MsG0180005708.01.T01:CDS 45.0%
GTGAAGACAACGTGCATGAA+GGG - Chr1:95235909-95235928 MsG0180005708.01.T01:CDS 45.0%
TACCGAGGATGAGATGTTCA+AGG - Chr1:95236957-95236976 MsG0180005708.01.T01:CDS 45.0%
TGAGACGGAGAATGAAGACA+AGG - Chr1:95236129-95236148 MsG0180005708.01.T01:CDS 45.0%
! AAATGCGAGCTCTGATACCA+CGG - Chr1:95236870-95236889 MsG0180005708.01.T01:CDS 45.0%
! AGAAGAGGGTGATGATGAGA+CGG - Chr1:95236114-95236133 MsG0180005708.01.T01:intron 45.0%
! TGAAAAGCACGAGGAAGAAG+AGG - Chr1:95235790-95235809 MsG0180005708.01.T01:CDS 45.0%
! TGATCGTGATGATGAGGTTG+TGG - Chr1:95236072-95236091 MsG0180005708.01.T01:intron 45.0%
!! ACAGATGGATTAGAGCAGAG+TGG - Chr1:95236673-95236692 MsG0180005708.01.T01:CDS 45.0%
!! TTGGCTATCGGGGTTTGTTT+TGG + Chr1:95236479-95236498 None:intergenic 45.0%
AAGGAGGATGAGGAAAAGGG+GGG - Chr1:95236148-95236167 MsG0180005708.01.T01:CDS 50.0%
ATCATGTGCCACAGCACTAG+AGG + Chr1:95236233-95236252 None:intergenic 50.0%
ATGCAAGCTGGTAAAGAGGC+TGG - Chr1:95236427-95236446 MsG0180005708.01.T01:CDS 50.0%
CAAGGAGGATGAGGAAAAGG+GGG - Chr1:95236147-95236166 MsG0180005708.01.T01:CDS 50.0%
CCACGACAATCATGAAGCTC+GGG - Chr1:95236183-95236202 MsG0180005708.01.T01:CDS 50.0%
GAAGAGGTGGAAGATGAAGG+AGG - Chr1:95236001-95236020 MsG0180005708.01.T01:CDS 50.0%
GACGGAGAATGAAGACAAGG+AGG - Chr1:95236132-95236151 MsG0180005708.01.T01:CDS 50.0%
TCAGAATACTGACGCTACCG+AGG - Chr1:95236942-95236961 MsG0180005708.01.T01:CDS 50.0%
! TGATGATGCCTCTAGTGCTG+TGG - Chr1:95236222-95236241 MsG0180005708.01.T01:CDS 50.0%
AGCAGTAACTCGACAGGCAC+TGG - Chr1:95236541-95236560 MsG0180005708.01.T01:CDS 55.0%
CCCGAGCTTCATGATTGTCG+TGG + Chr1:95236186-95236205 None:intergenic 55.0%
GACGCAAGCAGTAACTCGAC+AGG - Chr1:95236535-95236554 MsG0180005708.01.T01:CDS 55.0%
! GGAGCTGCCACTCCATTTTC+AGG + Chr1:95236754-95236773 None:intergenic 55.0%
TAAGCACGGAGCCGAAGAGC+AGG - Chr1:95235958-95235977 MsG0180005708.01.T01:intron 60.0%
GCACGGAGCCGAAGAGCAGG+AGG - Chr1:95235961-95235980 MsG0180005708.01.T01:intron 70.0%
Chromosome Type Strat End Strand Name
Chr1 gene 95235789 95237182 95235789 ID=MsG0180005708.01;Name=MsG0180005708.01
Chr1 mRNA 95235789 95237182 95235789 ID=MsG0180005708.01.T01;Parent=MsG0180005708.01;Name=MsG0180005708.01.T01;_AED=0.49;_eAED=0.51;_QI=0|0|0|1|0|0|4|0|425
Chr1 exon 95235789 95235928 95235789 ID=MsG0180005708.01.T01:exon:19366;Parent=MsG0180005708.01.T01
Chr1 exon 95235965 95236075 95235965 ID=MsG0180005708.01.T01:exon:19365;Parent=MsG0180005708.01.T01
Chr1 exon 95236115 95237056 95236115 ID=MsG0180005708.01.T01:exon:19364;Parent=MsG0180005708.01.T01
Chr1 exon 95237098 95237182 95237098 ID=MsG0180005708.01.T01:exon:19363;Parent=MsG0180005708.01.T01
Chr1 CDS 95237098 95237182 95237098 ID=MsG0180005708.01.T01:cds;Parent=MsG0180005708.01.T01
Chr1 CDS 95236115 95237056 95236115 ID=MsG0180005708.01.T01:cds;Parent=MsG0180005708.01.T01
Chr1 CDS 95235965 95236075 95235965 ID=MsG0180005708.01.T01:cds;Parent=MsG0180005708.01.T01
Chr1 CDS 95235789 95235928 95235789 ID=MsG0180005708.01.T01:cds;Parent=MsG0180005708.01.T01
Chr1 mRNA 95235789 95236370 95235789 ID=MsG0180005708.01.T02;Parent=MsG0180005708.01;Name=MsG0180005708.01.T02;_AED=0.50;_eAED=0.50;_QI=0|0|0|1|0|0|2|0|181
Chr1 exon 95235789 95236078 95235789 ID=MsG0180005708.01.T02:exon:19368;Parent=MsG0180005708.01.T02
Chr1 exon 95236115 95236370 95236115 ID=MsG0180005708.01.T02:exon:19367;Parent=MsG0180005708.01.T02
Chr1 CDS 95236115 95236370 95236115 ID=MsG0180005708.01.T02:cds;Parent=MsG0180005708.01.T02
Chr1 CDS 95235789 95236078 95235789 ID=MsG0180005708.01.T02:cds;Parent=MsG0180005708.01.T02
Chr1 mRNA 95235789 95236544 95235789 ID=MsG0180005708.01.T03;Parent=MsG0180005708.01;Name=MsG0180005708.01.T03;_AED=0.50;_eAED=0.50;_QI=0|-1|0|1|-1|0|1|0|251
Chr1 exon 95235789 95236544 95235789 ID=MsG0180005708.01.T03:exon:19369;Parent=MsG0180005708.01.T03
Chr1 CDS 95235789 95236544 95235789 ID=MsG0180005708.01.T03:cds;Parent=MsG0180005708.01.T03
Gene Sequence

>MsG0180005708.01.T01

ATGAAAAGCACGAGGAAGAAGAGGAAGATGAACATGTTGTATACAATATGCAAAAAACATGAACACGATGAACAACAACAAGAAGACAACGTGCATGAAGGGAGAGAAGAACATGATGAAGAAGAAAATAAGCACGGAGCCGAAGAGCAGGAGGAAAATGAAAGCAAAAGTGAAGAGGTGGAAGATGAAGGAGGAGATGTTGAGATAAATGAAAATGATCATGAGAAATCAGAGGCAGATAATGATCGTGATGATGAGGTTGTGGATGAAGAGAAAGACAAAGAAGAAGAGGGTGATGATGAGACGGAGAATGAAGACAAGGAGGATGAGGAAAAGGGGGGTTTAGTTGAAAACCACGACAATCATGAAGCTCGGGAAGAACATTACAAGGCTGATGATGCCTCTAGTGCTGTGGCACATGATACTCGTGAAACTAGCACTGAAACAAGTAATTTGGAACACGCTGATCTAAGCTTACAAATAAATACCAGAAAACCTGAAAACGAGACAACTCATCATTCTGATGAAAGTAACAGGAGTCAAAATGATTCTGATTTGAAGGTTACAGAAGGTGAATTGACAGATGGAATTTTTCAAATGCAAGCTGGTAAAGAGGCTGGAAATGACAGTTTGTCTAATGAAACGGCCAAAACAAACCCCGATAGCCAATTGGATTTAAGCAGTAATCTGACAGCAGTGATCACTGACGCAAGCAGTAACTCGACAGGCACTGGTGATGACACGTCAAGTTCATCTGGACAGATTAAAGCGATGATCTTATCCGAGTCTGATCATGCTCAAAATGCGACAGTTAATACAACAATTACTGGAGATATAAAGCAAACAGATGGATTAGAGCAGAGTGGCAGTAAAATTTCCGAAGGAAACCTACCTGGTAATGATTCAATTGTTTCTGTTAAACCTGAAAATGGAGTGGCAGCTCCTGAAAAATCTTCGACTCTTGGGGCTAGTGCATTAGAGAAGACGATCGGATCTGTAGCTTCAAATGAAACTGTTAACGTGTCCAGTGATAAATCTAAAGGTAGCACTGAAACTAGTGAAGCGAATGAAACTCAGAATACTGACGCTACCGAGGATGAGATGTTCAAGGGTGATACTCAAACAAGTGAAACCGATGATTCAATTGAACACGACACTATTGATTCTTCGGATACTCAAAACATACATGAGGATATGGCAAAGGCTCGAACTGATCTTGACACGTTGCCGGATATTAGAAATGAAGGAAATGATAGTGATGAAAATGCAGCAGAGTGA

>MsG0180005708.01.T03

ATGCAAGCTGGTAAAGAGGCTGGAAATGACAGTTTGTCTAATGAAACGGCCAAAACAAACCCCGATAGCCAATTGGATTTAAGCAGTAATCTGACAGCAGTGATCACTGACGCAAGCAGTAACTCGACAGGCACTGGTGATGACACGTCAAGTTCATCTGGACAGATTAAAGCGATGATCTTATCCGAGTCTGATCATGCTCAAAATGCGACAGTTAATACAACAATTACTGGAGATATAAAGCAAACAGATGGATTAGAGCAGAGTGGCAGTAAAATTTCCGAAGGAAACCTACCTGGTAATGATTCAATTGTTTCTGTTAAACCTGAAAATGGAGTGGCAGCTCCTGAAAAATCTTCGACTCTTGGGGCTAGTGCATTAGAGAAGACGATCGGATCTGTAGCTTCAAATGAAACTGTTAACGTGTCCAGTAATTTGGATAGAAATGCGAGCTCTGATACCACGGAAAGTGATAAATCTAAAGGTAGCACTGAAACTAGTGAAGCGAATGAAACTCAGAATACTGACGCTACCGAGGATGAGATGTTCAAGGGTGATACTCAAACAAGTGAAACCGATGGAAAATCAGACACATCCTCTGTCACTGAAATTTTAGATTCAATTGAACACGACACTATTGATTCTTCGGATACTCAAAACATACATGAGGATATGGCAAAGGCTCGAACTGATCTTGACACGTTGCCGGATATTAGAAATGAAGGAAATGATAGTGATGAAAATGCAGCAGAGTGA

>MsG0180005708.01.T02

ATGATCTTATCCGAGTCTGATCATGCTCAAAATGCGACAGTTAATACAACAATTACTGGAGATATAAAGCAAACAGATGGATTAGAGCAGAGTGGCAGTAAAATTTCCGAAGGAAACCTACCTGGTAATGATTCAATTGTTTCTGTTAAACCTGAAAATGGAGTGGCAGCTCCTGAAAAATCTTCGACTCTTGGGGCTAGTGCATTAGAGAAGACGATCGGATCTGTAGCTTCAAATGAAACTGTTAACGTGTCCAAAAGTGATAAATCTAAAGGTAGCACTGAAACTAGTGAAGCGAATGAAACTCAGAATACTGACGCTACCGAGGATGAGATGTTCAAGGGTGATACTCAAACAAGTGAAACCGATGGAAAATCAGACACATCCTCTGTCACTGAAATTTTAGATTCAATTGAACACGACACTATTGATTCTTCGGATACTCAAAACATACATGAGGATATGGCAAAGGCTCGAACTGATCTTGACACGTTGCCGGATATTAGAAATGAAGGAAATGATAGTGATGAAAATGCAGCAGAGTGA

Protein sequence

>MsG0180005708.01.T01

MKSTRKKRKMNMLYTICKKHEHDEQQQEDNVHEGREEHDEEENKHGAEEQEENESKSEEVEDEGGDVEINENDHEKSEADNDRDDEVVDEEKDKEEEGDDETENEDKEDEEKGGLVENHDNHEAREEHYKADDASSAVAHDTRETSTETSNLEHADLSLQINTRKPENETTHHSDESNRSQNDSDLKVTEGELTDGIFQMQAGKEAGNDSLSNETAKTNPDSQLDLSSNLTAVITDASSNSTGTGDDTSSSSGQIKAMILSESDHAQNATVNTTITGDIKQTDGLEQSGSKISEGNLPGNDSIVSVKPENGVAAPEKSSTLGASALEKTIGSVASNETVNVSSDKSKGSTETSEANETQNTDATEDEMFKGDTQTSETDDSIEHDTIDSSDTQNIHEDMAKARTDLDTLPDIRNEGNDSDENAAE*

>MsG0180005708.01.T03

MQAGKEAGNDSLSNETAKTNPDSQLDLSSNLTAVITDASSNSTGTGDDTSSSSGQIKAMILSESDHAQNATVNTTITGDIKQTDGLEQSGSKISEGNLPGNDSIVSVKPENGVAAPEKSSTLGASALEKTIGSVASNETVNVSSNLDRNASSDTTESDKSKGSTETSEANETQNTDATEDEMFKGDTQTSETDGKSDTSSVTEILDSIEHDTIDSSDTQNIHEDMAKARTDLDTLPDIRNEGNDSDENAAE*

>MsG0180005708.01.T02

MILSESDHAQNATVNTTITGDIKQTDGLEQSGSKISEGNLPGNDSIVSVKPENGVAAPEKSSTLGASALEKTIGSVASNETVNVSKSDKSKGSTETSEANETQNTDATEDEMFKGDTQTSETDGKSDTSSVTEILDSIEHDTIDSSDTQNIHEDMAKARTDLDTLPDIRNEGNDSDENAAE*