AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0001650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001650 MtrunA17_Chr8g0389131 96.447 788 25 1 3 787 1 788 0.0 1591
Msa0001650 MtrunA17_Chr3g0132391 44.701 736 351 16 57 779 81 773 0.0 600
Msa0001650 MtrunA17_Chr7g0259581 32.902 696 368 24 75 747 202 821 3.70e-97 321
Msa0001650 MtrunA17_Chr1g0197251 22.883 555 289 21 171 639 295 796 1.26e-16 84.7
Msa0001650 MtrunA17_Chr7g0265941 26.840 231 131 10 195 419 306 504 1.47e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0001650 AT2G39930.1 77.402 739 164 2 48 783 41 779 0.0 1231
Msa0001650 AT2G39930.2 78.606 617 129 2 48 661 41 657 0.0 1045
Msa0001650 AT2G39930.3 77.758 562 122 2 48 606 41 602 0.0 939
Msa0001650 AT4G09020.1 44.954 763 359 18 34 779 43 761 0.0 610
Msa0001650 AT1G03310.2 30.137 730 404 20 74 779 228 875 1.07e-93 313
Msa0001650 AT1G03310.1 30.137 730 404 20 74 779 228 875 1.07e-93 313
Msa0001650 AT5G04360.1 23.150 635 368 24 77 639 204 790 1.61e-16 84.7
Msa0001650 AT5G04360.2 23.150 635 368 24 77 639 204 790 1.61e-16 84.7
Msa0001650 AT5G03650.1 30.603 232 121 11 195 419 258 456 3.74e-14 77.0
Msa0001650 AT2G36390.1 26.407 231 132 10 195 419 293 491 1.45e-11 68.6

Find 224 sgRNAs with CRISPR-Local

Find 696 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTTCCCTCACTGGGGTATT+TGG 0.181610 1_1:-3313353 Msa0001650:CDS
CTACAGTTACAATGCTATTC+AGG 0.204436 1_1:-3317183 Msa0001650:CDS
ATCAATGGCGGACTGCTTAA+AGG 0.214386 1_1:+3314492 None:intergenic
TGGAACAGAGTTAATGTATT+TGG 0.249081 1_1:-3314552 Msa0001650:CDS
GTTATAAGAAGAGGAGAGTT+TGG 0.251910 1_1:-3318270 Msa0001650:CDS
AACTCCTCTAAAAGAAATAA+TGG 0.265535 1_1:+3316336 None:intergenic
CTTCTTTGACCTTGAATTTG+AGG 0.284584 1_1:+3319011 None:intergenic
TGTTCTTTCGCGCTTTCTTT+TGG 0.293035 1_1:+3319300 None:intergenic
CTCTATGCTTATAAATTTGA+TGG 0.295492 1_1:-3318601 Msa0001650:CDS
TGGCTTCACTCTAGCTGATT+TGG 0.301346 1_1:-3311959 Msa0001650:CDS
GGGGAATTCTACAACTATTC+AGG 0.301916 1_1:-3315486 Msa0001650:CDS
GGAGAAGCTTGATCACTTAA+AGG 0.307380 1_1:-3317942 Msa0001650:intron
CTGTATTGCAATATCTCTTC+CGG 0.308252 1_1:+3308856 None:intergenic
GGGAGTTCCGATGATATATA+TGG 0.316369 1_1:-3310416 Msa0001650:CDS
TGGGAGTCCTAATTTGTATC+AGG 0.317614 1_1:-3312313 Msa0001650:intron
ATCATTGTTGTCTTCTCCAT+TGG 0.320037 1_1:+3311909 None:intergenic
TTATAAGAAGAGGAGAGTTT+GGG 0.321726 1_1:-3318269 Msa0001650:CDS
GTCAGCAAGTCACCTTCTAT+TGG 0.323135 1_1:+3314525 None:intergenic
AGGTACCATACCAGCCATTT+GGG 0.325178 1_1:+3318218 None:intergenic
ATATATATGGGAGATGAATA+TGG 0.330449 1_1:-3310403 Msa0001650:CDS
TCCACTATTAATAGACTGTT+TGG 0.336645 1_1:-3308601 Msa0001650:three_prime_UTR
AGATAAACCTGATACAAATT+AGG 0.337665 1_1:+3312306 None:intergenic
ATCATATGGTGCTTTCTTGC+TGG 0.344939 1_1:+3308898 None:intergenic
TCTGTTGTGAATCTCGAAAT+TGG 0.346786 1_1:+3319050 None:intergenic
TTATTTCCAATGGGACAAAA+AGG 0.350277 1_1:-3310245 Msa0001650:CDS
GTTTGGCATGTGTTTCTAAA+AGG 0.352602 1_1:-3318640 Msa0001650:CDS
AAGGGTACAGATGGCTTTGC+TGG 0.353599 1_1:-3312357 Msa0001650:CDS
TCAGACCAGTCTGGTGTTAC+AGG 0.355192 1_1:+3310031 None:intergenic
AATTTATAGTGGACTGCTTA+AGG 0.368791 1_1:-3315422 Msa0001650:intron
TCTCTCGTGCAACAGATATT+GGG 0.369152 1_1:-3314733 Msa0001650:intron
AAGCAATAATCAAAGAAAAC+TGG 0.369488 1_1:+3319158 None:intergenic
CATCTGTACCCTTGATAAAC+TGG 0.375594 1_1:+3312367 None:intergenic
AGTCTGGTGTTACAGGAAAA+TGG 0.377654 1_1:+3310038 None:intergenic
AAGTTGGCACTTTCCCTCAC+TGG 0.385401 1_1:-3313362 Msa0001650:CDS
TCGAGTAAGGCCGAGTTTCC+TGG 0.387372 1_1:-3317983 Msa0001650:CDS
AAGGTACCATACCAGCCATT+TGG 0.387541 1_1:+3318217 None:intergenic
GAAGGTGACTTGCTGACAAT+TGG 0.397727 1_1:-3314519 Msa0001650:CDS
TCATTGTTGTCTTCTCCATT+GGG 0.398138 1_1:+3311910 None:intergenic
TGACCTTGAATTTGAGGAAA+TGG 0.399301 1_1:+3319017 None:intergenic
ACTATAAATTTCCTTACAAC+GGG 0.399791 1_1:+3315435 None:intergenic
TCAATGGCGGACTGCTTAAA+GGG 0.403047 1_1:+3314493 None:intergenic
TAATTTCTTTCTTTCTCTCA+TGG 0.403152 1_1:-3311100 Msa0001650:CDS
TTTCTCACACCTGATCTTCC+CGG 0.403432 1_1:-3308875 Msa0001650:CDS
GTATATTTGCTACACGTGAT+TGG 0.406044 1_1:+3308686 None:intergenic
ATTGCAACCATCCCGTTGTA+AGG 0.408121 1_1:-3315446 Msa0001650:CDS
TGCAATGTGTTTAGTTTGAC+TGG 0.408898 1_1:-3318087 Msa0001650:intron
GAGTTTCCTGGTACATATCT+TGG 0.413063 1_1:-3317971 Msa0001650:CDS
GATCCATTGCTGAATAAAAC+AGG 0.415433 1_1:-3318667 Msa0001650:CDS
GGCACACAAGCGAGGAATAG+AGG 0.424028 1_1:-3316506 Msa0001650:intron
TGCAGCTTAATTATTTCCAA+TGG 0.425257 1_1:-3310255 Msa0001650:intron
TCTTTCTCTCATGGTTTCCC+AGG 0.430118 1_1:-3311091 Msa0001650:intron
ACTCCTCTAAAAGAAATAAT+GGG 0.435507 1_1:+3316337 None:intergenic
CAGAGCGTCCTGGATACATA+TGG 0.435923 1_1:-3308937 Msa0001650:CDS
ACCAAACAGTCTATTAATAG+TGG 0.436010 1_1:+3308600 None:intergenic
AGCCTTTGGAAACTTGCAAT+TGG 0.436280 1_1:+3318920 None:intergenic
GTATTTGGTGCTCCAATAGA+AGG 0.437044 1_1:-3314537 Msa0001650:CDS
TCACCATTTCCTCAAATTCA+AGG 0.439664 1_1:-3319020 Msa0001650:CDS
ATAGCTGAAGCCTGGGATGC+TGG 0.441423 1_1:-3313396 Msa0001650:CDS
TGTATTGCAATATCTCTTCC+GGG 0.441702 1_1:+3308857 None:intergenic
AGAAGAAAACCTTCGCCGTT+GGG 0.443010 1_1:-3318993 Msa0001650:CDS
CGTTGTAAGGAAATTTATAG+TGG 0.443119 1_1:-3315433 Msa0001650:CDS
TAGGACCTGATGGTAATTGC+TGG 0.443531 1_1:-3318242 Msa0001650:CDS
CTGATGTCGGGAAGTCATCT+AGG 0.444177 1_1:+3310080 None:intergenic
CTATTATGACCAGGAGTAGC+AGG 0.449828 1_1:-3314668 Msa0001650:intron
TATAGCTTATAGCTGAAGCC+TGG 0.452561 1_1:-3313404 Msa0001650:intron
GAGAAAATCACAATAGTAGC+TGG 0.454266 1_1:-3311885 Msa0001650:CDS
CCCTCACTGGGGTATTTGGT+CGG 0.455085 1_1:-3313349 Msa0001650:CDS
AGTGTTGTAGAGTGAGAAAG+AGG 0.455306 1_1:+3319093 None:intergenic
GAGTGAATTGAGTGAGTAAA+TGG 0.458844 1_1:+3318849 None:intergenic
GCCTTTGAAATATCCACAAA+AGG 0.460159 1_1:-3318053 Msa0001650:CDS
ATATCTCTTCCGGGAAGATC+AGG 0.461427 1_1:+3308866 None:intergenic
TGAATAAAACAGGATGTGTT+TGG 0.461640 1_1:-3318657 Msa0001650:CDS
GTATTTGGTCGGAATGGAAT+GGG 0.462316 1_1:-3313338 Msa0001650:CDS
CATTGGTGAAAAGTAATTGA+TGG 0.464554 1_1:+3316603 None:intergenic
GTAGGGTGAAGGGTAGCCTT+TGG 0.465735 1_1:+3318906 None:intergenic
ACAAGCTAAGCATTTACATC+GGG 0.468285 1_1:+3308761 None:intergenic
AGAGGAGAGTTTGGGGAAGT+AGG 0.474230 1_1:-3318261 Msa0001650:CDS
GCTGATGAGTATCTTATCAT+TGG 0.475818 1_1:+3316586 None:intergenic
ATTACTGGAGCAGGTTATCA+TGG 0.476022 1_1:-3316401 Msa0001650:intron
ACCTTCACTCCACGAAGTAT+TGG 0.476206 1_1:+3314450 None:intergenic
GCAGCTTAATTATTTCCAAT+GGG 0.477071 1_1:-3310254 Msa0001650:intron
GTACAGGCCTCCAGCATCCC+AGG 0.477191 1_1:+3313386 None:intergenic
CACTGTACGCCAGTTTATCA+AGG 0.477869 1_1:-3312376 Msa0001650:CDS
TGGTAATTGCTGGCCCCAAA+TGG 0.480850 1_1:-3318232 Msa0001650:CDS
TTCTACAACTATTCAGGATG+TGG 0.486104 1_1:-3315480 Msa0001650:CDS
AGTTGGCACTTTCCCTCACT+GGG 0.493678 1_1:-3313361 Msa0001650:CDS
AGTACCTCCTCATGATCAAA+AGG 0.494764 1_1:+3318198 None:intergenic
CATATGTATCCAGGACGCTC+TGG 0.496645 1_1:+3308938 None:intergenic
ACTGAAGCCTCTCTGATGTC+GGG 0.499110 1_1:+3310068 None:intergenic
GGTATTTGGTCGGAATGGAA+TGG 0.501264 1_1:-3313339 Msa0001650:CDS
ACTAAGCATGGGATACATCT+TGG 0.501593 1_1:+3308811 None:intergenic
ACTGGCGGAACTTGGTCAAA+AGG 0.502084 1_1:+3310188 None:intergenic
ATTACCTTGCCAGAGCGTCC+TGG 0.503886 1_1:-3308947 Msa0001650:CDS
TACAAAGCATGAGTCGAGTA+AGG 0.506814 1_1:-3317996 Msa0001650:CDS
TACAAAACTGTGGCCGTGAT+GGG 0.507138 1_1:-3316558 Msa0001650:CDS
CACTGAAGCCTCTCTGATGT+CGG 0.508243 1_1:+3310067 None:intergenic
GCATTTGCTGAATGTATTTG+TGG 0.508395 1_1:-3312333 Msa0001650:CDS
CGGTTGGAAAGAAAGGAAAA+GGG 0.510546 1_1:-3319335 None:intergenic
TACAGTTACAATGCTATTCA+GGG 0.511531 1_1:-3317182 Msa0001650:CDS
GATGAATATGGACATACAAA+AGG 0.512112 1_1:-3310391 Msa0001650:CDS
GGAAAGTGCCAACTTGGTAC+AGG 0.512943 1_1:+3313370 None:intergenic
GGAGTTCCGATGATATATAT+GGG 0.517870 1_1:-3310415 Msa0001650:CDS
TGGGGCCAGCAATTACCATC+AGG 0.521370 1_1:+3318237 None:intergenic
TGCAGGGAATGTGAGTCGCT+TGG 0.523500 1_1:-3310103 Msa0001650:intron
AGTGAGGGAAAGTGCCAACT+TGG 0.524104 1_1:+3313364 None:intergenic
CGGCTAGATTCAGACCAGTC+TGG 0.526153 1_1:+3310022 None:intergenic
ATCTTGCTTCTATTATGACC+AGG 0.526714 1_1:-3314677 Msa0001650:CDS
CTGGCCCCAAATGGCTGGTA+TGG 0.529820 1_1:-3318223 Msa0001650:CDS
CACTATAAATTTCCTTACAA+CGG 0.530840 1_1:+3315434 None:intergenic
ATTATTGCTTTGATCAACAA+TGG 0.532060 1_1:-3319145 Msa0001650:exon
AACCTTGTATGTGCTCATGA+TGG 0.532079 1_1:-3311979 Msa0001650:CDS
GAGTACTTACTGGCGGAACT+TGG 0.533315 1_1:+3310180 None:intergenic
GTGCCTCAGTAAAGAAATTG+AGG 0.534102 1_1:-3311137 Msa0001650:CDS
TTCTTGAGGAGTGGCACCGT+AGG 0.535813 1_1:+3318888 None:intergenic
AAGAAGAAAACCTTCGCCGT+TGG 0.535917 1_1:-3318994 Msa0001650:CDS
ATGATAAGATACTCATCAGC+TGG 0.536295 1_1:-3316583 Msa0001650:CDS
AGTATATAACCTGCTACTCC+TGG 0.536428 1_1:+3314659 None:intergenic
TATAAGAAGAGGAGAGTTTG+GGG 0.537514 1_1:-3318268 Msa0001650:CDS
GATTGAAGAGTAACTAAGCA+TGG 0.540141 1_1:+3308799 None:intergenic
ACTCAGATGGACTCGGTGAA+GGG 0.540328 1_1:-3309013 Msa0001650:intron
AGAGGTTCCCATATGTATCC+AGG 0.540662 1_1:+3308929 None:intergenic
TCAGGTGTGAGAAAATCATA+TGG 0.541452 1_1:+3308884 None:intergenic
CATTTGCTGAATGTATTTGT+GGG 0.541483 1_1:-3312332 Msa0001650:CDS
GATTAGGCAGTTATAAGAAG+AGG 0.541788 1_1:-3318279 Msa0001650:intron
CACAATAGTAGCTGGAACTG+TGG 0.542471 1_1:-3311877 Msa0001650:CDS
AACTCAGATGGACTCGGTGA+AGG 0.542854 1_1:-3309014 Msa0001650:intron
ATACTGATCATATCAATCAA+TGG 0.544584 1_1:+3314477 None:intergenic
GTGCCACTCCTCAAGAAGAC+GGG 0.548138 1_1:-3318882 Msa0001650:CDS
CAGTTTATCAAGGGTACAGA+TGG 0.549849 1_1:-3312366 Msa0001650:CDS
TCCAATACTTCGTGGAGTGA+AGG 0.550686 1_1:-3314451 Msa0001650:intron
AATTGCTGGCCCCAAATGGC+TGG 0.551029 1_1:-3318228 Msa0001650:CDS
AATGGAGAAGACAACAATGA+TGG 0.552146 1_1:-3311907 Msa0001650:CDS
GTATTACATGGTGGCACCCA+AGG 0.555302 1_1:-3316302 Msa0001650:intron
ATGTCATGAGTTCAATGAGC+TGG 0.556145 1_1:-3317210 Msa0001650:CDS
TAAATTTCCTTACAACGGGA+TGG 0.557866 1_1:+3315439 None:intergenic
GCTTTGATCAACAATGGCAA+TGG 0.558374 1_1:-3319139 Msa0001650:exon
GGAGTGGCACCGTAGGGTGA+AGG 0.558934 1_1:+3318895 None:intergenic
ACTGGGGTATTTGGTCGGAA+TGG 0.560039 1_1:-3313344 Msa0001650:CDS
CGCCAATTGCAAGTTTCCAA+AGG 0.561119 1_1:-3318922 Msa0001650:CDS
GAAAGAGGAGAGAGAATGTG+AGG 0.563347 1_1:+3319108 None:intergenic
ACAAGGTTAATACTATTCCA+TGG 0.565220 1_1:+3311994 None:intergenic
TTCTTGCTGGTGTCTACGAG+AGG 0.566153 1_1:+3308911 None:intergenic
TGACAATAGCGTGTATTACA+TGG 0.566359 1_1:-3316314 Msa0001650:CDS
ATAGCTTATAGCTGAAGCCT+GGG 0.567230 1_1:-3313403 Msa0001650:intron
TTTCCTCAATTTCTTTACTG+AGG 0.567283 1_1:+3311134 None:intergenic
AGTATTGATCCAATACTTCG+TGG 0.568695 1_1:-3314459 Msa0001650:CDS
GACACGATTCCCAACGGCGA+AGG 0.568849 1_1:+3318984 None:intergenic
TGAATTTGAGGAAATGGTGA+TGG 0.569036 1_1:+3319023 None:intergenic
TATATGAAATGCATGTGAGA+GGG 0.570887 1_1:-3318021 Msa0001650:CDS
CCAGGGTAAAAGCCACAAAA+CGG 0.572393 1_1:+3310002 None:intergenic
AAATTGACCCCGTCTTCTTG+AGG 0.573022 1_1:+3318874 None:intergenic
TTAGCTTGTATACTAGTACT+AGG 0.574530 1_1:-3308747 Msa0001650:exon
AAAGGCTACCCTTCACCCTA+CGG 0.576668 1_1:-3318904 Msa0001650:CDS
AAAATAAACTCAGATGGACT+CGG 0.579909 1_1:-3309020 Msa0001650:intron
AGCCATCATGAGCACATACA+AGG 0.581009 1_1:+3311977 None:intergenic
AGAGCGTCCTGGATACATAT+GGG 0.583885 1_1:-3308936 Msa0001650:CDS
TCAGAGAGGCTTCAGTGGCA+TGG 0.583978 1_1:-3310061 Msa0001650:CDS
TCTTGAGGAGTGGCACCGTA+GGG 0.585196 1_1:+3318889 None:intergenic
TCATAGTAGTGACCGTGTTG+AGG 0.585274 1_1:+3318568 None:intergenic
TCATCTCCCATATATATCAT+CGG 0.586946 1_1:+3310409 None:intergenic
CACGTAATTATCATGACAGT+AGG 0.588746 1_1:+3310354 None:intergenic
GCTTGTGTGCCTCTTTGATG+AGG 0.589192 1_1:+3316518 None:intergenic
GAGTGGCACCGTAGGGTGAA+GGG 0.589871 1_1:+3318896 None:intergenic
ATACAAAACTGTGGCCGTGA+TGG 0.591554 1_1:-3316559 Msa0001650:CDS
TTTGGGGAAGTAGGACCTGA+TGG 0.592579 1_1:-3318252 Msa0001650:CDS
CGACATCAGAGAGGCTTCAG+TGG 0.592621 1_1:-3310066 Msa0001650:CDS
AATAAGCATAACTTGCCCAA+TGG 0.595993 1_1:-3311925 Msa0001650:CDS
GTAACAGAAATGCACGTGGA+TGG 0.600720 1_1:-3314711 Msa0001650:CDS
TTCGCCGTTGGGAATCGTGT+CGG 0.601538 1_1:-3318982 Msa0001650:CDS
TACAGCTGAAGGGAATGAGA+AGG 0.602790 1_1:-3316362 Msa0001650:CDS
TCTGGCAAGGTAATAGTGAA+AGG 0.602980 1_1:+3308956 None:intergenic
TGGTACATATCTTGGTGTCG+TGG 0.603299 1_1:-3317963 Msa0001650:CDS
GCTGGAGGCCTGTACCAAGT+TGG 0.603543 1_1:-3313378 Msa0001650:CDS
ATTTGAGGAAATGGTGATGG+AGG 0.605171 1_1:+3319026 None:intergenic
TACAAGCTAAGCATTTACAT+CGG 0.605456 1_1:+3308760 None:intergenic
ATTGAAGAGTAACTAAGCAT+GGG 0.607101 1_1:+3308800 None:intergenic
AAGATATGTACCAGGAAACT+CGG 0.608454 1_1:+3317973 None:intergenic
TTATTTGCAGAATAAAGTGA+CGG 0.609693 1_1:-3318704 Msa0001650:intron
TCTACAACTATTCAGGATGT+GGG 0.610031 1_1:-3315479 Msa0001650:CDS
TCATTTCATTAATCCCATCA+CGG 0.612574 1_1:+3316545 None:intergenic
GTATCCAGGACGCTCTGGCA+AGG 0.614100 1_1:+3308943 None:intergenic
ATATATGAAATGCATGTGAG+AGG 0.617561 1_1:-3318022 Msa0001650:CDS
GAATATGGACATACAAAAGG+AGG 0.618039 1_1:-3310388 Msa0001650:CDS
GAACAATTTGTGATAAATTG+TGG 0.620697 1_1:+3308713 None:intergenic
AAAGGAAAAGGGGAAGTGAG+TGG 0.620737 1_1:-3319324 None:intergenic
GACCCCGTCTTCTTGAGGAG+TGG 0.621998 1_1:+3318879 None:intergenic
GGTGCCACTCCTCAAGAAGA+CGG 0.623962 1_1:-3318883 Msa0001650:CDS
AAGGAAAAGGGGAAGTGAGT+GGG 0.624640 1_1:-3319323 Msa0001650:five_prime_UTR
AATGAAGCTCCTCATCAAAG+AGG 0.627064 1_1:-3316527 Msa0001650:CDS
ATCAAAGAGGCACACAAGCG+AGG 0.630952 1_1:-3316514 Msa0001650:CDS
AGCTCATTGAACTCATGACA+TGG 0.632491 1_1:+3317212 None:intergenic
ACAGCTGAAGGGAATGAGAA+GGG 0.635794 1_1:-3316361 Msa0001650:CDS
TGTGTTTAGTTTGACTGGGA+AGG 0.637186 1_1:-3318082 Msa0001650:intron
GGTTGGAAAGAAAGGAAAAG+GGG 0.642641 1_1:-3319334 None:intergenic
ACAGTTACAATGCTATTCAG+GGG 0.651047 1_1:-3317181 Msa0001650:CDS
CAATGGCGGACTGCTTAAAG+GGG 0.654129 1_1:+3314494 None:intergenic
GCAATGTGTTTAGTTTGACT+GGG 0.655343 1_1:-3318086 Msa0001650:intron
CCGACCAAATACCCCAGTGA+GGG 0.656679 1_1:+3313349 None:intergenic
GGCGGAACTTGGTCAAAAGG+CGG 0.659867 1_1:+3310191 None:intergenic
TTGGTCGGAATGGAATGGGA+AGG 0.660527 1_1:-3313334 Msa0001650:intron
GCTGAAGCCTGGGATGCTGG+AGG 0.661627 1_1:-3313393 Msa0001650:CDS
GGTACCATACCAGCCATTTG+GGG 0.663979 1_1:+3318219 None:intergenic
ACTACGCGGGATCTGTTGCA+AGG 0.666520 1_1:-3308665 Msa0001650:three_prime_UTR
ACTGTACGCCAGTTTATCAA+GGG 0.666967 1_1:-3312375 Msa0001650:CDS
AACACCGACACGATTCCCAA+CGG 0.668297 1_1:+3318978 None:intergenic
ACGACACCAAGATATGTACC+AGG 0.668568 1_1:+3317965 None:intergenic
AAATGTAATGAGAGTGTGTG+TGG 0.673976 1_1:+3319181 None:intergenic
TAGTAGCTGGAACTGTGGAG+AGG 0.681130 1_1:-3311872 Msa0001650:intron
CAGTTACAATGCTATTCAGG+GGG 0.682543 1_1:-3317180 Msa0001650:CDS
TGCCACTCCTCAAGAAGACG+GGG 0.682576 1_1:-3318881 Msa0001650:CDS
AAGCTAAGCATTTACATCGG+GGG 0.687980 1_1:+3308763 None:intergenic
GTGTAGCAAATATACTACGC+GGG 0.689752 1_1:-3308678 Msa0001650:three_prime_UTR
TACAGGGAGGAAGAAAACCA+TGG 0.702341 1_1:-3312011 Msa0001650:intron
ACGCGGGATCTGTTGCAAGG+TGG 0.702402 1_1:-3308662 Msa0001650:three_prime_UTR
CAAGCTAAGCATTTACATCG+GGG 0.707585 1_1:+3308762 None:intergenic
CTGATCATATCAATCAATGG+CGG 0.707861 1_1:+3314480 None:intergenic
GTTGGCACTTTCCCTCACTG+GGG 0.708819 1_1:-3313360 Msa0001650:CDS
TCAGCTGGCATACAAAACTG+TGG 0.712260 1_1:-3316568 Msa0001650:CDS
ATGACTTCCCGACATCAGAG+AGG 0.714408 1_1:-3310075 Msa0001650:CDS
CGTGTAGCAAATATACTACG+CGG 0.717031 1_1:-3308679 Msa0001650:three_prime_UTR
CAATAGCGTGTATTACATGG+TGG 0.718161 1_1:-3316311 Msa0001650:CDS
AAATCTGAAGAAGTCTGACG+AGG 0.720742 1_1:+3310216 None:intergenic
TCCGACCAAATACCCCAGTG+AGG 0.722871 1_1:+3313348 None:intergenic
TTGGGTAACAGAAATGCACG+TGG 0.738443 1_1:-3314715 Msa0001650:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTTATTTATTTATTTA+TGG - chr1_1:3309743-3309762 Msa0001650:intron 0.0%
!!! AATCATATAACAATTTTTTA+TGG - chr1_1:3310982-3311001 Msa0001650:intron 10.0%
!!! AAAAAATATTTTTTTTGTTC+CGG + chr1_1:3311892-3311911 None:intergenic 10.0%
!!! ATGATAATTAAAAATTTGTT+TGG + chr1_1:3311923-3311942 None:intergenic 10.0%
!! TTTATGAAGTTTATTATTAT+AGG - chr1_1:3312550-3312569 Msa0001650:intron 10.0%
!!! TAAGTTTTTTTTTTTTTTTG+GGG - chr1_1:3313542-3313561 Msa0001650:intron 10.0%
!! TTAATATAAATAAATGTATG+TGG - chr1_1:3314226-3314245 Msa0001650:intron 10.0%
!! ATTAAACAATTTAAGAAAAT+GGG - chr1_1:3314252-3314271 Msa0001650:intron 10.0%
!! ATTAAATTTGAGAAATTTAT+TGG - chr1_1:3317221-3317240 Msa0001650:CDS 10.0%
!! AAATTAAAAACCTAAAAACT+CGG + chr1_1:3309182-3309201 None:intergenic 15.0%
!!! TTAATGAAACTATTTTCATT+TGG - chr1_1:3310637-3310656 Msa0001650:intron 15.0%
!!! TTTTAGTGAATATTATGATT+TGG - chr1_1:3311011-3311030 Msa0001650:intron 15.0%
!! TGTTTCAATTATTATTTACA+AGG - chr1_1:3313119-3313138 Msa0001650:intron 15.0%
!! GTTTCAATTATTATTTACAA+GGG - chr1_1:3313120-3313139 Msa0001650:intron 15.0%
!! TTTCAATTATTATTTACAAG+GGG - chr1_1:3313121-3313140 Msa0001650:intron 15.0%
!! TTATATACTATATAATGCAT+TGG - chr1_1:3313274-3313293 Msa0001650:intron 15.0%
!!! AAGTTTTTTTTTTTTTTTGG+GGG - chr1_1:3313543-3313562 Msa0001650:intron 15.0%
!! TTTATTTAAAGACAAACAAT+TGG - chr1_1:3314151-3314170 Msa0001650:intron 15.0%
!! GATTAAACAATTTAAGAAAA+TGG - chr1_1:3314251-3314270 Msa0001650:intron 15.0%
!! TTAAACAATTTAAGAAAATG+GGG - chr1_1:3314253-3314272 Msa0001650:intron 15.0%
!! AAACTAGGTAATTATTATTT+AGG - chr1_1:3314277-3314296 Msa0001650:intron 15.0%
!!! TCATTATATTTTATTCTCAT+GGG - chr1_1:3315780-3315799 Msa0001650:intron 15.0%
!! AATATCATCTACATTTAAAT+CGG + chr1_1:3317438-3317457 None:intergenic 15.0%
!! TAAAAAATTCTAGTAGATAA+GGG + chr1_1:3317594-3317613 None:intergenic 15.0%
!! TTAAAAAATTCTAGTAGATA+AGG + chr1_1:3317595-3317614 None:intergenic 15.0%
!!! TATATAATAAGATCCTTTTG+TGG + chr1_1:3309882-3309901 None:intergenic 20.0%
!! AAAATGTAATTTATCACAAG+AGG - chr1_1:3310059-3310078 Msa0001650:CDS 20.0%
!!! TCATGAAAAACAAATTTTTG+TGG + chr1_1:3310553-3310572 None:intergenic 20.0%
!!! AAATTTGTTTTTCATGAACA+TGG - chr1_1:3310556-3310575 Msa0001650:intron 20.0%
!!! AATTTGTTTTTCATGAACAT+GGG - chr1_1:3310557-3310576 Msa0001650:intron 20.0%
!! ATGACAATGATACTAATAAA+TGG + chr1_1:3310863-3310882 None:intergenic 20.0%
!!! TATAACAATTTTTTATGGAC+TGG - chr1_1:3310987-3311006 Msa0001650:intron 20.0%
!! ATTTAGATAATAAGTGTTCA+CGG + chr1_1:3311839-3311858 None:intergenic 20.0%
!!! ATGTTATGTGTAAACAATTT+TGG + chr1_1:3311950-3311969 None:intergenic 20.0%
!! AAATCAGGAATACAAAAAAA+TGG + chr1_1:3311991-3312010 None:intergenic 20.0%
!!! ATTTTTTTGTATTCCTGATT+TGG - chr1_1:3311990-3312009 Msa0001650:CDS 20.0%
!! ATAAGATTTAATTCCAAATC+AGG + chr1_1:3312006-3312025 None:intergenic 20.0%
!!! TCTTTTATTCTTTTAAACCA+CGG - chr1_1:3312376-3312395 Msa0001650:CDS 20.0%
!! AAGAGATAATGTACATTAAA+AGG + chr1_1:3312602-3312621 None:intergenic 20.0%
!! ATACTAAATATGTACATCTA+TGG + chr1_1:3312774-3312793 None:intergenic 20.0%
!! ATATTTAGTATACCACAAAT+GGG - chr1_1:3312783-3312802 Msa0001650:intron 20.0%
!! GATACAAAAATGGAAATAAT+TGG - chr1_1:3312841-3312860 Msa0001650:intron 20.0%
!!! AAGAAATTTTGTCTTGAAAA+TGG + chr1_1:3312919-3312938 None:intergenic 20.0%
!!! GAAATTAACAAATCTTTTTG+TGG - chr1_1:3313653-3313672 Msa0001650:intron 20.0%
!! TAAACAATTTAAGAAAATGG+GGG - chr1_1:3314254-3314273 Msa0001650:intron 20.0%
!!! TATTGTTATACTTTTCCTTT+GGG - chr1_1:3314342-3314361 Msa0001650:intron 20.0%
!! ATTTATTATTATGATGTGAC+TGG - chr1_1:3314644-3314663 Msa0001650:intron 20.0%
!!! TTTTTTTTTGGTACAAAAGA+GGG + chr1_1:3314810-3314829 None:intergenic 20.0%
!!! TCAGGTTATATGTTTTTTTT+TGG + chr1_1:3314822-3314841 None:intergenic 20.0%
!!! ATGCATATTGTATTTTTGAA+TGG - chr1_1:3314973-3314992 Msa0001650:intron 20.0%
!! TAAGATTGAACATTTGAAAA+AGG + chr1_1:3315106-3315125 None:intergenic 20.0%
!!! ATGTATTCTTTAGAAAGTTT+GGG + chr1_1:3315434-3315453 None:intergenic 20.0%
!! TGTACTGAAAAAATAAAGAA+TGG + chr1_1:3315519-3315538 None:intergenic 20.0%
!!! CTCATTATATTTTATTCTCA+TGG - chr1_1:3315779-3315798 Msa0001650:intron 20.0%
!!! ATAAAAATATGATGATGGAT+AGG + chr1_1:3316362-3316381 None:intergenic 20.0%
!!! ATCCATCATCATATTTTTAT+AGG - chr1_1:3316362-3316381 Msa0001650:CDS 20.0%
!! TTCCTATAAAAATATGATGA+TGG + chr1_1:3316367-3316386 None:intergenic 20.0%
!! AATAGATATGACAAGATATT+AGG + chr1_1:3316515-3316534 None:intergenic 20.0%
!!! TTTTCTTCAAGAAATTTGTT+TGG - chr1_1:3316882-3316901 Msa0001650:intron 20.0%
!! ATATTATAGTCAAGATACAT+CGG + chr1_1:3317007-3317026 None:intergenic 20.0%
!! GGAATATTTGCTTATAAATA+AGG + chr1_1:3317039-3317058 None:intergenic 20.0%
!! TTAAATGTAGATGATATTGT+TGG - chr1_1:3317440-3317459 Msa0001650:intron 20.0%
!! TGATCAGATAAACTAAAAAT+CGG + chr1_1:3317483-3317502 None:intergenic 20.0%
!!! ATTTTTAGTTTATCTGATCA+GGG - chr1_1:3317483-3317502 Msa0001650:intron 20.0%
!! AAAAAATTCTAGTAGATAAG+GGG + chr1_1:3317593-3317612 None:intergenic 20.0%
!! TTTACCTAAAATGTAGAATT+AGG - chr1_1:3318033-3318052 Msa0001650:CDS 20.0%
!! TCAACACTTATAAACTTATA+AGG - chr1_1:3318249-3318268 Msa0001650:CDS 20.0%
!! ATACAGATATATCTCAAAAA+AGG + chr1_1:3318379-3318398 None:intergenic 20.0%
!!! TTTTAAGGGAAAAAAGTTAA+CGG + chr1_1:3318756-3318775 None:intergenic 20.0%
!!! TTTATTTTCATGCCAAATAA+GGG + chr1_1:3318887-3318906 None:intergenic 20.0%
! AAGCAATAATCAAAGAAAAC+TGG + chr1_1:3308764-3308783 None:intergenic 25.0%
! ATTATTGCTTTGATCAACAA+TGG - chr1_1:3308774-3308793 Msa0001650:CDS 25.0%
! TTATTTGCAGAATAAAGTGA+CGG - chr1_1:3309215-3309234 Msa0001650:intron 25.0%
! CTCTATGCTTATAAATTTGA+TGG - chr1_1:3309318-3309337 Msa0001650:intron 25.0%
! ACACTAAATGTTTAAAAGTG+AGG + chr1_1:3309518-3309537 None:intergenic 25.0%
!!! TTTTGTTTAAAAGAGCCTAA+TGG + chr1_1:3309551-3309570 None:intergenic 25.0%
! AGCACTACTATTATATTGTA+TGG - chr1_1:3309586-3309605 Msa0001650:intron 25.0%
! CTATTATATTGTATGGTATG+TGG - chr1_1:3309593-3309612 Msa0001650:intron 25.0%
! AAATGAGTACTACATCATAA+GGG + chr1_1:3309620-3309639 None:intergenic 25.0%
!!! GATTTCTATGTTTTATTGAG+TGG - chr1_1:3310031-3310050 Msa0001650:CDS 25.0%
!! TCAAAATTACTTCCTTTTAG+AGG + chr1_1:3310117-3310136 None:intergenic 25.0%
! TGATAATATGATGAACTAGA+TGG - chr1_1:3310134-3310153 Msa0001650:intron 25.0%
! ATTGTAACTGAACTTGATTA+AGG - chr1_1:3310358-3310377 Msa0001650:CDS 25.0%
!!! AGACTTTAAGATTATGGTTT+GGG + chr1_1:3310486-3310505 None:intergenic 25.0%
!!! TAGACTTTAAGATTATGGTT+TGG + chr1_1:3310487-3310506 None:intergenic 25.0%
!!! TTCTGTAGACTTTAAGATTA+TGG + chr1_1:3310492-3310511 None:intergenic 25.0%
! ATTACTACATAAAGCAGATA+TGG - chr1_1:3310609-3310628 Msa0001650:intron 25.0%
! TTGTATTATCTTCAAGTCAT+AGG - chr1_1:3310823-3310842 Msa0001650:intron 25.0%
! GCATCAAATAATGAACTAAT+TGG - chr1_1:3310902-3310921 Msa0001650:intron 25.0%
! TTTGGTGAGTTTACAATATT+TGG - chr1_1:3311029-3311048 Msa0001650:intron 25.0%
! ATATTTGGTTAGTAGACTTT+AGG - chr1_1:3311044-3311063 Msa0001650:intron 25.0%
! AAAAAAAACAGTCAGCATAA+AGG + chr1_1:3311114-3311133 None:intergenic 25.0%
!!! TTTTTTTTATCAGGCATATC+TGG - chr1_1:3311127-3311146 Msa0001650:CDS 25.0%
!! CACTGTTGTTAGTATAATTT+TGG - chr1_1:3311154-3311173 Msa0001650:CDS 25.0%
!!! ACATCCATTTTTTTTAGAGA+AGG + chr1_1:3311180-3311199 None:intergenic 25.0%
!!! ACCTGTTTCATTTTTCTTTT+AGG - chr1_1:3311271-3311290 Msa0001650:intron 25.0%
!!! CCTGTTTCATTTTTCTTTTA+GGG - chr1_1:3311272-3311291 Msa0001650:intron 25.0%
!!! TTTCTTTTAGGGTCAATTTT+TGG - chr1_1:3311283-3311302 Msa0001650:intron 25.0%
!!! TTCTTTTAGGGTCAATTTTT+GGG - chr1_1:3311284-3311303 Msa0001650:intron 25.0%
!! ACTCCTCTAAAAGAAATAAT+GGG + chr1_1:3311585-3311604 None:intergenic 25.0%
!! AACTCCTCTAAAAGAAATAA+TGG + chr1_1:3311586-3311605 None:intergenic 25.0%
! AAGAGAGAATAAGAATGTTT+AGG + chr1_1:3311647-3311666 None:intergenic 25.0%
! GTGTGAAAATATATCAGATT+TGG - chr1_1:3311760-3311779 Msa0001650:intron 25.0%
!!! TATTTTTTTTGTTCCGGTTT+AGG + chr1_1:3311886-3311905 None:intergenic 25.0%
! TTACAAGGAAACTAAATACT+GGG + chr1_1:3312157-3312176 None:intergenic 25.0%
! ATTACAAGGAAACTAAATAC+TGG + chr1_1:3312158-3312177 None:intergenic 25.0%
! AACAAAGATTTCTGATTTAC+TGG + chr1_1:3312228-3312247 None:intergenic 25.0%
! ATATGCATCTTTACTTCTAA+AGG - chr1_1:3312271-3312290 Msa0001650:intron 25.0%
!! ATCAAGTTTTTATGGCTATT+TGG - chr1_1:3312307-3312326 Msa0001650:intron 25.0%
!! CTTTTATTCTTTTAAACCAC+GGG - chr1_1:3312377-3312396 Msa0001650:CDS 25.0%
! ACTATAAATTTCCTTACAAC+GGG + chr1_1:3312487-3312506 None:intergenic 25.0%
! CACTATAAATTTCCTTACAA+CGG + chr1_1:3312488-3312507 None:intergenic 25.0%
! CATATTTAGTATACCACAAA+TGG - chr1_1:3312782-3312801 Msa0001650:intron 25.0%
!! ACTTGTTAAGGATACAAAAA+TGG - chr1_1:3312831-3312850 Msa0001650:intron 25.0%
! ATATGCTACAAATTACGAAA+GGG + chr1_1:3312992-3313011 None:intergenic 25.0%
! ATACTGATCATATCAATCAA+TGG + chr1_1:3313445-3313464 None:intergenic 25.0%
! TTTGTATATCTGATTGTTTC+AGG + chr1_1:3313686-3313705 None:intergenic 25.0%
!!! AGTGATGATGCAAATTTTAT+TGG - chr1_1:3313706-3313725 Msa0001650:intron 25.0%
!! ATAAATGAAGCTAGATTTTG+TGG - chr1_1:3313846-3313865 Msa0001650:intron 25.0%
!! CTATTGTTATACTTTTCCTT+TGG - chr1_1:3314341-3314360 Msa0001650:intron 25.0%
!! ATAGAACTTTTCTTTGCAAT+AGG - chr1_1:3314394-3314413 Msa0001650:intron 25.0%
!!! TATATTAGTTTGCACTTGTT+TGG - chr1_1:3314451-3314470 Msa0001650:intron 25.0%
! TATAACATATAACCTGACTT+TGG - chr1_1:3314778-3314797 Msa0001650:intron 25.0%
! ATAACATATAACCTGACTTT+GGG - chr1_1:3314779-3314798 Msa0001650:intron 25.0%
!!! GTTTTTTTTTGGTACAAAAG+AGG + chr1_1:3314811-3314830 None:intergenic 25.0%
! TCTTGTAATTTCACATAAAC+AGG + chr1_1:3314857-3314876 None:intergenic 25.0%
! TATGCATAACATATCAAAAG+TGG + chr1_1:3314960-3314979 None:intergenic 25.0%
! AGGAAAATAACACTAGTAAA+AGG + chr1_1:3315334-3315353 None:intergenic 25.0%
!! CATGTATTCTTTAGAAAGTT+TGG + chr1_1:3315435-3315454 None:intergenic 25.0%
! AGAATACATGATCTACAAAT+TGG - chr1_1:3315445-3315464 Msa0001650:CDS 25.0%
!! TGTTATATAACATGCACTTT+TGG - chr1_1:3315469-3315488 Msa0001650:CDS 25.0%
! AGATAAACCTGATACAAATT+AGG + chr1_1:3315616-3315635 None:intergenic 25.0%
! ATAAGAGAAACAAATAGAAG+TGG + chr1_1:3315689-3315708 None:intergenic 25.0%
! TTGAAATCAATAAGAGAAAC+CGG + chr1_1:3315718-3315737 None:intergenic 25.0%
!! ATATTTTATTCTCATGGGAT+TGG - chr1_1:3315785-3315804 Msa0001650:intron 25.0%
!! TGGACATTACTCTATATTTT+TGG - chr1_1:3315885-3315904 Msa0001650:intron 25.0%
!!! TTACTCTATATTTTTGGTAC+AGG - chr1_1:3315891-3315910 Msa0001650:intron 25.0%
!!! TACTCTATATTTTTGGTACA+GGG - chr1_1:3315892-3315911 Msa0001650:intron 25.0%
!!! AATCTGGAGAAGTATTATAA+AGG + chr1_1:3316248-3316267 None:intergenic 25.0%
!! TATGAATTAGGCTTTTAAAC+TGG - chr1_1:3316314-3316333 Msa0001650:CDS 25.0%
! TGTTTAACATTATGCATTTC+TGG - chr1_1:3316591-3316610 Msa0001650:CDS 25.0%
! GTTTAACATTATGCATTTCT+GGG - chr1_1:3316592-3316611 Msa0001650:CDS 25.0%
! CACAGATTAAGATTCTAATA+GGG + chr1_1:3316680-3316699 None:intergenic 25.0%
! ACACAGATTAAGATTCTAAT+AGG + chr1_1:3316681-3316700 None:intergenic 25.0%
! TGCATTTCTCAAATTAATGT+AGG - chr1_1:3316744-3316763 Msa0001650:intron 25.0%
! ATTTCTCAAATTAATGTAGG+AGG - chr1_1:3316747-3316766 Msa0001650:intron 25.0%
! TTTCTCAAATTAATGTAGGA+GGG - chr1_1:3316748-3316767 Msa0001650:intron 25.0%
! TAATTTCTTTCTTTCTCTCA+TGG - chr1_1:3316819-3316838 Msa0001650:intron 25.0%
!! TAAACAAATATTCCTTTTCC+AGG - chr1_1:3316969-3316988 Msa0001650:intron 25.0%
! TTTGCTTATAAATAAGGATC+TGG + chr1_1:3317033-3317052 None:intergenic 25.0%
! TTATTCAATGAACCTGAAAA+GGG + chr1_1:3317060-3317079 None:intergenic 25.0%
!! ATAAATAACAAGTTTTGCAC+AGG - chr1_1:3317083-3317102 Msa0001650:intron 25.0%
!! AGTTTCTTCTGACTTTTATA+CGG - chr1_1:3317116-3317135 Msa0001650:intron 25.0%
!!! CTAAAGTGACTTTTAGTTTA+TGG - chr1_1:3317161-3317180 Msa0001650:intron 25.0%
! CTAGTTAAAGAATCAAGAAA+TGG + chr1_1:3317298-3317317 None:intergenic 25.0%
! ACAACACTACATTAAACTAA+GGG + chr1_1:3317376-3317395 None:intergenic 25.0%
! TACAACACTACATTAAACTA+AGG + chr1_1:3317377-3317396 None:intergenic 25.0%
!!! GATTTTTAGTTTATCTGATC+AGG - chr1_1:3317482-3317501 Msa0001650:intron 25.0%
! ATATATATGGGAGATGAATA+TGG - chr1_1:3317516-3317535 Msa0001650:intron 25.0%
! GAAATAATTAAGCTGCAAAA+AGG + chr1_1:3317661-3317680 None:intergenic 25.0%
!! ACTCTTATATTTCTGTTTCA+TGG + chr1_1:3317958-3317977 None:intergenic 25.0%
! AAACAGAAATATAAGAGTTC+TGG - chr1_1:3317960-3317979 Msa0001650:CDS 25.0%
! TTAGGTAAAGATCATAAGAA+TGG + chr1_1:3318022-3318041 None:intergenic 25.0%
!! ATGTCCTAATTCTACATTTT+AGG + chr1_1:3318040-3318059 None:intergenic 25.0%
! AAACTAATTTCAACTCATGT+AGG + chr1_1:3318184-3318203 None:intergenic 25.0%
! TAGATTTCTAACTTACGTAA+GGG + chr1_1:3318276-3318295 None:intergenic 25.0%
! ATAGATTTCTAACTTACGTA+AGG + chr1_1:3318277-3318296 None:intergenic 25.0%
! ACATAACGTTGTTAAAAACT+TGG + chr1_1:3318608-3318627 None:intergenic 25.0%
!! AAGGAATTGAACACTTTTAA+GGG + chr1_1:3318770-3318789 None:intergenic 25.0%
!! TAAGGAATTGAACACTTTTA+AGG + chr1_1:3318771-3318790 None:intergenic 25.0%
!! TTATTTTCATGCCAAATAAG+GGG + chr1_1:3318886-3318905 None:intergenic 25.0%
!!! GTTTATTTTCATGCCAAATA+AGG + chr1_1:3318888-3318907 None:intergenic 25.0%
! GAACAATTTGTGATAAATTG+TGG + chr1_1:3319209-3319228 None:intergenic 25.0%
! CAAAACTTTTCCGAGTTTTT+AGG - chr1_1:3309169-3309188 Msa0001650:intron 30.0%
TGAATAAAACAGGATGTGTT+TGG - chr1_1:3309262-3309281 Msa0001650:intron 30.0%
CAAGTACATTATAGTTGAGA+TGG - chr1_1:3309438-3309457 Msa0001650:intron 30.0%
CAAATGAGTACTACATCATA+AGG + chr1_1:3309621-3309640 None:intergenic 30.0%
GATGTAGTACTCATTTGATT+AGG - chr1_1:3309624-3309643 Msa0001650:intron 30.0%
TTATAAGAAGAGGAGAGTTT+GGG - chr1_1:3309650-3309669 Msa0001650:intron 30.0%
! TCCTTTTGTGGATATTTCAA+AGG + chr1_1:3309870-3309889 None:intergenic 30.0%
ATATATGAAATGCATGTGAG+AGG - chr1_1:3309897-3309916 Msa0001650:intron 30.0%
TATATGAAATGCATGTGAGA+GGG - chr1_1:3309898-3309917 Msa0001650:intron 30.0%
AAGATAATGTGTCCTCTAAA+AGG - chr1_1:3310102-3310121 Msa0001650:intron 30.0%
AATTGTGATAAAATCCTCAG+TGG - chr1_1:3310244-3310263 Msa0001650:CDS 30.0%
! TCATACTGCGTCTTTATTTA+GGG - chr1_1:3310280-3310299 Msa0001650:intron 30.0%
! CTTTATTTAGGGAAAGGAAA+AGG - chr1_1:3310291-3310310 Msa0001650:intron 30.0%
CATACTGTCATCAATATGTT+TGG - chr1_1:3310407-3310426 Msa0001650:CDS 30.0%
! ATTATGGTTTGGGAGAATTA+TGG + chr1_1:3310476-3310495 None:intergenic 30.0%
! TTTGGCATTATTCATTTTGC+AGG - chr1_1:3310655-3310674 Msa0001650:intron 30.0%
! TTATTCATTTTGCAGGAACT+TGG - chr1_1:3310662-3310681 Msa0001650:intron 30.0%
TACAGTTACAATGCTATTCA+GGG - chr1_1:3310737-3310756 Msa0001650:intron 30.0%
GATAATACAACTAGAAGTCA+AGG + chr1_1:3310813-3310832 None:intergenic 30.0%
! TATTTGATGCAAAGCATCAA+GGG + chr1_1:3310892-3310911 None:intergenic 30.0%
! TTATTTGATGCAAAGCATCA+AGG + chr1_1:3310893-3310912 None:intergenic 30.0%
!!! GCTGACTGTTTTTTTTTATC+AGG - chr1_1:3311118-3311137 Msa0001650:CDS 30.0%
! TTGGCCTTCTCTAAAAAAAA+TGG - chr1_1:3311173-3311192 Msa0001650:intron 30.0%
CCCTAAAAGAAAAATGAAAC+AGG + chr1_1:3311275-3311294 None:intergenic 30.0%
!!! TCTTTTAGGGTCAATTTTTG+GGG - chr1_1:3311285-3311304 Msa0001650:intron 30.0%
CATTGGTGAAAAGTAATTGA+TGG + chr1_1:3311319-3311338 None:intergenic 30.0%
TCATTTCATTAATCCCATCA+CGG + chr1_1:3311377-3311396 None:intergenic 30.0%
!! TGTTTTCCTTGCTATATTAC+TGG - chr1_1:3311503-3311522 Msa0001650:intron 30.0%
! TTTTCAATCATACAGCTGAA+GGG - chr1_1:3311547-3311566 Msa0001650:intron 30.0%
AGAATGTTTAGGAATACCTT+GGG + chr1_1:3311636-3311655 None:intergenic 30.0%
AAGAATGTTTAGGAATACCT+TGG + chr1_1:3311637-3311656 None:intergenic 30.0%
TATTCTCTCTTTCAGCTATT+TGG - chr1_1:3311656-3311675 Msa0001650:intron 30.0%
AACTCAAATCTCAAAGAAGT+AGG - chr1_1:3311703-3311722 Msa0001650:intron 30.0%
AACCAGTTAATAGTGATCAA+TGG - chr1_1:3311808-3311827 Msa0001650:intron 30.0%
GTGATTATCTATTCCTAAAC+CGG - chr1_1:3311870-3311889 Msa0001650:intron 30.0%
! GTATGCAGATCAAGTTTTTA+TGG - chr1_1:3312299-3312318 Msa0001650:intron 30.0%
CGTTGTAAGGAAATTTATAG+TGG - chr1_1:3312486-3312505 Msa0001650:intron 30.0%
!! AATTTATAGTGGACTGCTTA+AGG - chr1_1:3312497-3312516 Msa0001650:intron 30.0%
! GTCAACAATCTTTTGATATC+TGG + chr1_1:3312649-3312668 None:intergenic 30.0%
!! TTGTTGACTTCTGTATCTAT+TGG - chr1_1:3312661-3312680 Msa0001650:intron 30.0%
GATATGCTACAAATTACGAA+AGG + chr1_1:3312993-3313012 None:intergenic 30.0%
TTGCTACCATATTAGATTGA+AGG - chr1_1:3313151-3313170 Msa0001650:intron 30.0%
TGGAACAGAGTTAATGTATT+TGG - chr1_1:3313367-3313386 Msa0001650:CDS 30.0%
CCTAGAACAATTTAAAAGTG+TGG + chr1_1:3313619-3313638 None:intergenic 30.0%
! CCACACTTTTAAATTGTTCT+AGG - chr1_1:3313616-3313635 Msa0001650:intron 30.0%
! AAACAATTTAGCTTCTTGCA+AGG + chr1_1:3313882-3313901 None:intergenic 30.0%
TTTCTATTTGGAGAAGCTAT+TGG - chr1_1:3313942-3313961 Msa0001650:intron 30.0%
GTGTATAACACAAGGAATAA+TGG - chr1_1:3314079-3314098 Msa0001650:intron 30.0%
AGGAATAATGGTGACTTAAA+AGG - chr1_1:3314091-3314110 Msa0001650:intron 30.0%
ATGGTGACTTAAAAGGAATT+TGG - chr1_1:3314098-3314117 Msa0001650:intron 30.0%
TGGTGACTTAAAAGGAATTT+GGG - chr1_1:3314099-3314118 Msa0001650:intron 30.0%
ATAGAGCTGATATTTGCAAT+CGG - chr1_1:3314302-3314321 Msa0001650:intron 30.0%
AGTTCATCTAATTTAGCACT+GGG + chr1_1:3314915-3314934 None:intergenic 30.0%
AAGTTCATCTAATTTAGCAC+TGG + chr1_1:3314916-3314935 None:intergenic 30.0%
TAGTAAAACTGGTATAGGAA+TGG + chr1_1:3315205-3315224 None:intergenic 30.0%
! ATTCCTATACCAGTTTTACT+AGG - chr1_1:3315204-3315223 Msa0001650:intron 30.0%
!!! GGCATTTTAGTTTGCATAAA+GGG + chr1_1:3315281-3315300 None:intergenic 30.0%
CACAGACTTTGGTTAAATTT+CGG + chr1_1:3315302-3315321 None:intergenic 30.0%
! CATTTGCTGAATGTATTTGT+GGG - chr1_1:3315587-3315606 Msa0001650:intron 30.0%
! TTGTTTCTCTTATCATTGAC+CGG - chr1_1:3315696-3315715 Msa0001650:intron 30.0%
ACAAGGTTAATACTATTCCA+TGG + chr1_1:3315928-3315947 None:intergenic 30.0%
GCAGTAGAAACAAAATTAGA+AGG + chr1_1:3316119-3316138 None:intergenic 30.0%
!!! CTAATTTTGTTTCTACTGCA+TGG - chr1_1:3316120-3316139 Msa0001650:intron 30.0%
!! AAAATATGATGATGGATAGG+TGG + chr1_1:3316359-3316378 None:intergenic 30.0%
! ATCATTTTAGATTGTACACC+AGG - chr1_1:3316452-3316471 Msa0001650:intron 30.0%
TTAGTTAATTCCCGCTTAAA+TGG - chr1_1:3316616-3316635 Msa0001650:CDS 30.0%
TTCTCAAATTAATGTAGGAG+GGG - chr1_1:3316749-3316768 Msa0001650:intron 30.0%
TTTCCTCAATTTCTTTACTG+AGG + chr1_1:3316788-3316807 None:intergenic 30.0%
TGCTTATAAATGTGACCAAA+GGG + chr1_1:3316932-3316951 None:intergenic 30.0%
TTGCTTATAAATGTGACCAA+AGG + chr1_1:3316933-3316952 None:intergenic 30.0%
! ACATTTATAAGCAAAGTGCT+TGG - chr1_1:3316939-3316958 Msa0001650:intron 30.0%
TTATTCAATGAACCTGGAAA+AGG + chr1_1:3316984-3317003 None:intergenic 30.0%
! TAAGCAAATATTCCCTTTTC+AGG - chr1_1:3317045-3317064 Msa0001650:intron 30.0%
CTTATTCAATGAACCTGAAA+AGG + chr1_1:3317061-3317080 None:intergenic 30.0%
!!! TTTTTTGACCAATCACTCAT+GGG + chr1_1:3317321-3317340 None:intergenic 30.0%
!!! TTTTTTTGACCAATCACTCA+TGG + chr1_1:3317322-3317341 None:intergenic 30.0%
TCATCTCCCATATATATCAT+CGG + chr1_1:3317513-3317532 None:intergenic 30.0%
GATGAATATGGACATACAAA+AGG - chr1_1:3317528-3317547 Msa0001650:intron 30.0%
CAACTCCATTAAATTATCCT+CGG - chr1_1:3317635-3317654 Msa0001650:intron 30.0%
TGCAGCTTAATTATTTCCAA+TGG - chr1_1:3317664-3317683 Msa0001650:intron 30.0%
GCAGCTTAATTATTTCCAAT+GGG - chr1_1:3317665-3317684 Msa0001650:intron 30.0%
TTATTTCCAATGGGACAAAA+AGG - chr1_1:3317674-3317693 Msa0001650:intron 30.0%
!! TTTATAAGTGTTGACAGAGA+AGG + chr1_1:3318243-3318262 None:intergenic 30.0%
! TCAATTCCTTAAGCTCTTTT+TGG - chr1_1:3318780-3318799 Msa0001650:intron 30.0%
! TTTATGGATTATCCAAGCAA+AGG + chr1_1:3318850-3318869 None:intergenic 30.0%
! TATTTTCATGCCAAATAAGG+GGG + chr1_1:3318885-3318904 None:intergenic 30.0%
! AAAATAAACTCAGATGGACT+CGG - chr1_1:3318899-3318918 Msa0001650:CDS 30.0%
ATTGAAGAGTAACTAAGCAT+GGG + chr1_1:3319122-3319141 None:intergenic 30.0%
TACAAGCTAAGCATTTACAT+CGG + chr1_1:3319162-3319181 None:intergenic 30.0%
!! TTAGCTTGTATACTAGTACT+AGG - chr1_1:3319172-3319191 Msa0001650:five_prime_UTR 30.0%
TCCACTATTAATAGACTGTT+TGG - chr1_1:3319318-3319337 Msa0001650:five_prime_UTR 30.0%
ACCAAACAGTCTATTAATAG+TGG + chr1_1:3319322-3319341 None:intergenic 30.0%
! AAATGTAATGAGAGTGTGTG+TGG + chr1_1:3308741-3308760 None:intergenic 35.0%
TCTGTTGTGAATCTCGAAAT+TGG + chr1_1:3308872-3308891 None:intergenic 35.0%
TGAATTTGAGGAAATGGTGA+TGG + chr1_1:3308899-3308918 None:intergenic 35.0%
TCACCATTTCCTCAAATTCA+AGG - chr1_1:3308899-3308918 Msa0001650:CDS 35.0%
TGACCTTGAATTTGAGGAAA+TGG + chr1_1:3308905-3308924 None:intergenic 35.0%
CTTCTTTGACCTTGAATTTG+AGG + chr1_1:3308911-3308930 None:intergenic 35.0%
GAGTGAATTGAGTGAGTAAA+TGG + chr1_1:3309073-3309092 None:intergenic 35.0%
GATCCATTGCTGAATAAAAC+AGG - chr1_1:3309252-3309271 Msa0001650:intron 35.0%
!! CATCCTGTTTTATTCAGCAA+TGG + chr1_1:3309258-3309277 None:intergenic 35.0%
! GTTTGGCATGTGTTTCTAAA+AGG - chr1_1:3309279-3309298 Msa0001650:intron 35.0%
! AGAGACTAACTTTTGCGTAA+GGG + chr1_1:3309398-3309417 None:intergenic 35.0%
! AAGAGACTAACTTTTGCGTA+AGG + chr1_1:3309399-3309418 None:intergenic 35.0%
GTTTAAAAGTGAGGAATTGC+AGG + chr1_1:3309509-3309528 None:intergenic 35.0%
GATTAGGCAGTTATAAGAAG+AGG - chr1_1:3309640-3309659 Msa0001650:intron 35.0%
GTTATAAGAAGAGGAGAGTT+TGG - chr1_1:3309649-3309668 Msa0001650:intron 35.0%
TATAAGAAGAGGAGAGTTTG+GGG - chr1_1:3309651-3309670 Msa0001650:intron 35.0%
! TATGGTACCTTTTGATCATG+AGG - chr1_1:3309714-3309733 Msa0001650:intron 35.0%
!! TGCAATGTGTTTAGTTTGAC+TGG - chr1_1:3309832-3309851 Msa0001650:intron 35.0%
!! GCAATGTGTTTAGTTTGACT+GGG - chr1_1:3309833-3309852 Msa0001650:intron 35.0%
!! GCCTTTGAAATATCCACAAA+AGG - chr1_1:3309866-3309885 Msa0001650:intron 35.0%
AAGATATGTACCAGGAAACT+CGG + chr1_1:3309949-3309968 None:intergenic 35.0%
GGACACATTATCTTCTTCTA+TGG + chr1_1:3310096-3310115 None:intergenic 35.0%
! CTCATACTGCGTCTTTATTT+AGG - chr1_1:3310279-3310298 Msa0001650:intron 35.0%
ACTGAACTTGATTAAGGAGT+CGG - chr1_1:3310364-3310383 Msa0001650:CDS 35.0%
CTACAGTTACAATGCTATTC+AGG - chr1_1:3310736-3310755 Msa0001650:intron 35.0%
ACAGTTACAATGCTATTCAG+GGG - chr1_1:3310738-3310757 Msa0001650:intron 35.0%
CTATAGGTAAGAGAGTCATT+TGG - chr1_1:3310763-3310782 Msa0001650:intron 35.0%
TTTGGTTAGTAGACTTTAGG+TGG - chr1_1:3311047-3311066 Msa0001650:intron 35.0%
GCTGATGAGTATCTTATCAT+TGG + chr1_1:3311336-3311355 None:intergenic 35.0%
ATGATAAGATACTCATCAGC+TGG - chr1_1:3311336-3311355 Msa0001650:intron 35.0%
! GTTTTCAATCATACAGCTGA+AGG - chr1_1:3311546-3311565 Msa0001650:intron 35.0%
!! GGTCCCATTATTTCTTTTAG+AGG - chr1_1:3311579-3311598 Msa0001650:intron 35.0%
TGACAATAGCGTGTATTACA+TGG - chr1_1:3311605-3311624 Msa0001650:intron 35.0%
!! GGTTGGTAATATTTAAGCCT+TGG - chr1_1:3311677-3311696 Msa0001650:intron 35.0%
TGGTAATATTTAAGCCTTGG+AGG - chr1_1:3311680-3311699 Msa0001650:intron 35.0%
CAAATCTCAAAGAAGTAGGT+TGG - chr1_1:3311707-3311726 Msa0001650:intron 35.0%
AGCCATTGATCACTATTAAC+TGG + chr1_1:3311813-3311832 None:intergenic 35.0%
ACATACTTATTAGCTGGAAG+AGG + chr1_1:3312047-3312066 None:intergenic 35.0%
! GCATTGACATACTTATTAGC+TGG + chr1_1:3312053-3312072 None:intergenic 35.0%
! TCTTTTCTCGTTGGAGATTT+TGG + chr1_1:3312112-3312131 None:intergenic 35.0%
! CTCTAACTTTCTTTTCTCGT+TGG + chr1_1:3312121-3312140 None:intergenic 35.0%
ACGAGAAAAGAAAGTTAGAG+TGG - chr1_1:3312121-3312140 Msa0001650:intron 35.0%
TGCTGGAAAGTAGAATTACA+AGG + chr1_1:3312172-3312191 None:intergenic 35.0%
TTCTACAACTATTCAGGATG+TGG - chr1_1:3312439-3312458 Msa0001650:intron 35.0%
TCTACAACTATTCAGGATGT+GGG - chr1_1:3312440-3312459 Msa0001650:intron 35.0%
TAAATTTCCTTACAACGGGA+TGG + chr1_1:3312483-3312502 None:intergenic 35.0%
! TGCAGACTAACAGCATTTTA+TGG + chr1_1:3312715-3312734 None:intergenic 35.0%
TTGTTAACAAGACCCATTTG+TGG + chr1_1:3312798-3312817 None:intergenic 35.0%
GTAAGGCCTTCAATCTAATA+TGG + chr1_1:3313160-3313179 None:intergenic 35.0%
TGCACGAGAGAAAATTAGTA+AGG + chr1_1:3313177-3313196 None:intergenic 35.0%
ATCTTGCTTCTATTATGACC+AGG - chr1_1:3313242-3313261 Msa0001650:intron 35.0%
! GCATTGGTACTGAAATTTAC+TGG - chr1_1:3313290-3313309 Msa0001650:intron 35.0%
CTGATCATATCAATCAATGG+CGG + chr1_1:3313442-3313461 None:intergenic 35.0%
!! AGTATTGATCCAATACTTCG+TGG - chr1_1:3313460-3313479 Msa0001650:intron 35.0%
! ACATGATTTTTCTGTTCACC+AGG - chr1_1:3313773-3313792 Msa0001650:intron 35.0%
TTTAAACCCCTTTATCTTCC+TGG + chr1_1:3313794-3313813 None:intergenic 35.0%
!! TGAGTGCTGACATTTCTATT+TGG - chr1_1:3313930-3313949 Msa0001650:intron 35.0%
AATGCTGTGTGTTAGCTAAA+CGG - chr1_1:3313973-3313992 Msa0001650:intron 35.0%
AGTGAAGCAATGAAAAGAGT+TGG - chr1_1:3314041-3314060 Msa0001650:intron 35.0%
GTGAAGCAATGAAAAGAGTT+GGG - chr1_1:3314042-3314061 Msa0001650:intron 35.0%
TGAAAAGAGTTGGGATTGTT+AGG - chr1_1:3314051-3314070 Msa0001650:intron 35.0%
GAAAAGAGTTGGGATTGTTA+GGG - chr1_1:3314052-3314071 Msa0001650:intron 35.0%
AAAAGAGTTGGGATTGTTAG+GGG - chr1_1:3314053-3314072 Msa0001650:intron 35.0%
TTAAGAAAATGGGGGAAACT+AGG - chr1_1:3314262-3314281 Msa0001650:intron 35.0%
TATGACTATCGAAATCCCAA+AGG + chr1_1:3314360-3314379 None:intergenic 35.0%
TCGATAGTCATAGAAGTTAC+TGG - chr1_1:3314368-3314387 Msa0001650:intron 35.0%
CGATAGTCATAGAAGTTACT+GGG - chr1_1:3314369-3314388 Msa0001650:intron 35.0%
TCTTTGCAATAGGAACTGAT+TGG - chr1_1:3314404-3314423 Msa0001650:intron 35.0%
TGATGTGACTGGAAAATGAA+AGG - chr1_1:3314655-3314674 Msa0001650:intron 35.0%
TTTCACATAAACAGGCTACA+AGG + chr1_1:3314849-3314868 None:intergenic 35.0%
TGTCCTAGTAAAACTGGTAT+AGG + chr1_1:3315210-3315229 None:intergenic 35.0%
AAAGGGAATCAAGAAGATTC+TGG + chr1_1:3315264-3315283 None:intergenic 35.0%
!!! CGGCATTTTAGTTTGCATAA+AGG + chr1_1:3315282-3315301 None:intergenic 35.0%
CGAAATTTAACCAAAGTCTG+TGG - chr1_1:3315300-3315319 Msa0001650:intron 35.0%
GAAAGAAATGAACTAACACG+GGG + chr1_1:3315366-3315385 None:intergenic 35.0%
GGAAAGAAATGAACTAACAC+GGG + chr1_1:3315367-3315386 None:intergenic 35.0%
CGGAAAGAAATGAACTAACA+CGG + chr1_1:3315368-3315387 None:intergenic 35.0%
! GCATTTGCTGAATGTATTTG+TGG - chr1_1:3315586-3315605 Msa0001650:intron 35.0%
! CAGTAGTAGTTAGTTCCTTT+TGG - chr1_1:3315661-3315680 Msa0001650:intron 35.0%
CAAATAGAAGTGGTTCCAAA+AGG + chr1_1:3315679-3315698 None:intergenic 35.0%
! TTCTACCTTGTTCTTTTGTG+TGG - chr1_1:3315862-3315881 Msa0001650:intron 35.0%
!!! TCTATATTTTTGGTACAGGG+AGG - chr1_1:3315895-3315914 Msa0001650:intron 35.0%
! AATAAGCATAACTTGCCCAA+TGG - chr1_1:3315994-3316013 Msa0001650:intron 35.0%
TCATTGTTGTCTTCTCCATT+GGG + chr1_1:3316012-3316031 None:intergenic 35.0%
ATCATTGTTGTCTTCTCCAT+TGG + chr1_1:3316013-3316032 None:intergenic 35.0%
AATGGAGAAGACAACAATGA+TGG - chr1_1:3316012-3316031 Msa0001650:intron 35.0%
GAGAAAATCACAATAGTAGC+TGG - chr1_1:3316034-3316053 Msa0001650:intron 35.0%
!! TCTAAATACAACTCTGAAGC+AGG + chr1_1:3316087-3316106 None:intergenic 35.0%
!!! ATTTTGTTTCTACTGCATGG+TGG - chr1_1:3316123-3316142 Msa0001650:intron 35.0%
TATGATGACAGTAGTACACA+AGG + chr1_1:3316217-3316236 None:intergenic 35.0%
CTGCGTGTAACATATGAATT+AGG - chr1_1:3316302-3316321 Msa0001650:intron 35.0%
CTATAAGTTAGAGTAATGCC+TGG + chr1_1:3316473-3316492 None:intergenic 35.0%
CAGGCATTACTCTAACTTAT+AGG - chr1_1:3316471-3316490 Msa0001650:intron 35.0%
AAGATATTAGGCAGGAATAG+AGG + chr1_1:3316503-3316522 None:intergenic 35.0%
GATATGACAAGATATTAGGC+AGG + chr1_1:3316511-3316530 None:intergenic 35.0%
CACATGGGAGAAAATAGATA+CGG + chr1_1:3316553-3316572 None:intergenic 35.0%
TTTGAAGGATTCAGAAAGTG+AGG + chr1_1:3316652-3316671 None:intergenic 35.0%
TCTAATAGGGCTCTATTTGA+AGG + chr1_1:3316667-3316686 None:intergenic 35.0%
TCTCAAATTAATGTAGGAGG+GGG - chr1_1:3316750-3316769 Msa0001650:intron 35.0%
! AAGAAATTTGTTTGGACCAC+TGG - chr1_1:3316890-3316909 Msa0001650:intron 35.0%
AAAAAAACTAGTCCCTGAGA+GGG - chr1_1:3317335-3317354 Msa0001650:intron 35.0%
GGAGTTCCGATGATATATAT+GGG - chr1_1:3317504-3317523 Msa0001650:intron 35.0%
GAATATGGACATACAAAAGG+AGG - chr1_1:3317531-3317550 Msa0001650:intron 35.0%
CACGTAATTATCATGACAGT+AGG + chr1_1:3317568-3317587 None:intergenic 35.0%
AAAGGCCGAGGATAATTTAA+TGG + chr1_1:3317643-3317662 None:intergenic 35.0%
! ATTCTTCCTTTTTGTCCCAT+TGG + chr1_1:3317683-3317702 None:intergenic 35.0%
TGGTACTAGTAAAAAGCTAC+TGG - chr1_1:3317980-3317999 Msa0001650:CDS 35.0%
TGTATTACCTCTCAACTTGT+TGG + chr1_1:3318315-3318334 None:intergenic 35.0%
AGCTAAAGCAACTTTACATC+TGG - chr1_1:3318340-3318359 Msa0001650:intron 35.0%
GATTATTCGTAAACCTAGCT+GGG + chr1_1:3318403-3318422 None:intergenic 35.0%
AGATTATTCGTAAACCTAGC+TGG + chr1_1:3318404-3318423 None:intergenic 35.0%
! TTCTAAGGACAGCGTATATA+TGG - chr1_1:3318438-3318457 Msa0001650:intron 35.0%
ATCCGTTCAAATTGGAATTG+GGG + chr1_1:3318544-3318563 None:intergenic 35.0%
CATCCGTTCAAATTGGAATT+GGG + chr1_1:3318545-3318564 None:intergenic 35.0%
CTTATTGCATCCGTTCAAAT+TGG + chr1_1:3318552-3318571 None:intergenic 35.0%
! ATTAGTTTATGTCCAGGATC+TGG + chr1_1:3318662-3318681 None:intergenic 35.0%
!! AAGGGTATTAGTTTATGTCC+AGG + chr1_1:3318668-3318687 None:intergenic 35.0%
AGTACACCAAAAAGAGCTTA+AGG + chr1_1:3318789-3318808 None:intergenic 35.0%
GGGGGGAAATTAATCATTTA+TGG + chr1_1:3318866-3318885 None:intergenic 35.0%
ATTAATTTCCCCCCCTTATT+TGG - chr1_1:3318872-3318891 Msa0001650:CDS 35.0%
! ATTTTCATGCCAAATAAGGG+GGG + chr1_1:3318884-3318903 None:intergenic 35.0%
GGCATGAAAATAAACTCAGA+TGG - chr1_1:3318893-3318912 Msa0001650:CDS 35.0%
TCAGGTGTGAGAAAATCATA+TGG + chr1_1:3319038-3319057 None:intergenic 35.0%
TGTATTGCAATATCTCTTCC+GGG + chr1_1:3319065-3319084 None:intergenic 35.0%
CTGTATTGCAATATCTCTTC+CGG + chr1_1:3319066-3319085 None:intergenic 35.0%
GATTGAAGAGTAACTAAGCA+TGG + chr1_1:3319123-3319142 None:intergenic 35.0%
ACAAGCTAAGCATTTACATC+GGG + chr1_1:3319161-3319180 None:intergenic 35.0%
! GTATATTTGCTACACGTGAT+TGG + chr1_1:3319236-3319255 None:intergenic 35.0%
! TGTTCTTTCGCGCTTTCTTT+TGG + chr1_1:3308622-3308641 None:intergenic 40.0%
GCTTTGATCAACAATGGCAA+TGG - chr1_1:3308780-3308799 Msa0001650:CDS 40.0%
AGTGTTGTAGAGTGAGAAAG+AGG + chr1_1:3308829-3308848 None:intergenic 40.0%
!! ATTTGAGGAAATGGTGATGG+AGG + chr1_1:3308896-3308915 None:intergenic 40.0%
! AGCCTTTGGAAACTTGCAAT+TGG + chr1_1:3309002-3309021 None:intergenic 40.0%
! GGCAAATTTTCTCCTCAACA+CGG - chr1_1:3309339-3309358 Msa0001650:intron 40.0%
TAGTTGAGATGGTAACACGT+TGG - chr1_1:3309449-3309468 Msa0001650:intron 40.0%
TAACACGTTGGAGTGACATT+TGG - chr1_1:3309461-3309480 Msa0001650:intron 40.0%
GAGTGACATTTGGTATGTTG+AGG - chr1_1:3309471-3309490 Msa0001650:intron 40.0%
! AGTGTGTTAGTTTCGCCATT+AGG - chr1_1:3309533-3309552 Msa0001650:intron 40.0%
AGTACCTCCTCATGATCAAA+AGG + chr1_1:3309724-3309743 None:intergenic 40.0%
!! TGTGTTTAGTTTGACTGGGA+AGG - chr1_1:3309837-3309856 Msa0001650:intron 40.0%
TACAAAGCATGAGTCGAGTA+AGG - chr1_1:3309923-3309942 Msa0001650:intron 40.0%
GAGTTTCCTGGTACATATCT+TGG - chr1_1:3309948-3309967 Msa0001650:intron 40.0%
GGAGAAGCTTGATCACTTAA+AGG - chr1_1:3309977-3309996 Msa0001650:intron 40.0%
ATGAACTAGATGGCAAATGC+AGG - chr1_1:3310144-3310163 Msa0001650:intron 40.0%
TGAACTAGATGGCAAATGCA+GGG - chr1_1:3310145-3310164 Msa0001650:intron 40.0%
ATGGCAAATGCAGGGAAAAT+TGG - chr1_1:3310153-3310172 Msa0001650:intron 40.0%
ATAAAATCCTCAGTGGCAGA+TGG - chr1_1:3310251-3310270 Msa0001650:CDS 40.0%
! CTGCGTCTTTATTTAGGGAA+AGG - chr1_1:3310285-3310304 Msa0001650:intron 40.0%
AACTTGATTAAGGAGTCGGA+AGG - chr1_1:3310368-3310387 Msa0001650:CDS 40.0%
TATGGTCCAACAACAACACA+AGG + chr1_1:3310458-3310477 None:intergenic 40.0%
AGCTCATTGAACTCATGACA+TGG + chr1_1:3310710-3310729 None:intergenic 40.0%
ATGTCATGAGTTCAATGAGC+TGG - chr1_1:3310709-3310728 Msa0001650:intron 40.0%
CAGTTACAATGCTATTCAGG+GGG - chr1_1:3310739-3310758 Msa0001650:intron 40.0%
AGCATAAGTAGCTGCAATTC+TGG - chr1_1:3310950-3310969 Msa0001650:intron 40.0%
AGACTTTAGGTGGTTTAGCA+AGG - chr1_1:3311057-3311076 Msa0001650:intron 40.0%
GACTTTAGGTGGTTTAGCAA+GGG - chr1_1:3311058-3311077 Msa0001650:intron 40.0%
ACTTTAGGTGGTTTAGCAAG+GGG - chr1_1:3311059-3311078 Msa0001650:intron 40.0%
! CAGCATAAAGGCAAAGTACT+AGG + chr1_1:3311102-3311121 None:intergenic 40.0%
TGGATGTTATTCTACACGTG+TGG - chr1_1:3311193-3311212 Msa0001650:intron 40.0%
AATGAAGCTCCTCATCAAAG+AGG - chr1_1:3311392-3311411 Msa0001650:intron 40.0%
ATTACTGGAGCAGGTTATCA+TGG - chr1_1:3311518-3311537 Msa0001650:intron 40.0%
CAATAGCGTGTATTACATGG+TGG - chr1_1:3311608-3311627 Msa0001650:intron 40.0%
CTCTCTTTCAGCTATTTGGT+TGG - chr1_1:3311660-3311679 Msa0001650:intron 40.0%
! TTGAGATTTGAGTTCCTCCA+AGG + chr1_1:3311697-3311716 None:intergenic 40.0%
CATACAGAAGCAACAAGACA+TGG - chr1_1:3312079-3312098 Msa0001650:intron 40.0%
TTCCAGCATGATAACAGCTA+AGG - chr1_1:3312184-3312203 Msa0001650:intron 40.0%
ATCCTTAGCTGTTATCATGC+TGG + chr1_1:3312189-3312208 None:intergenic 40.0%
!! AGACCCACTTTTGTGTCTTT+AGG - chr1_1:3312411-3312430 Msa0001650:intron 40.0%
!! GACCCACTTTTGTGTCTTTA+GGG - chr1_1:3312412-3312431 Msa0001650:intron 40.0%
!! ACCCACTTTTGTGTCTTTAG+GGG - chr1_1:3312413-3312432 Msa0001650:intron 40.0%
GGGGAATTCTACAACTATTC+AGG - chr1_1:3312433-3312452 Msa0001650:intron 40.0%
CAACAGCATGTCAATACCAA+TGG + chr1_1:3312739-3312758 None:intergenic 40.0%
TCTTGTTAACAAGTGCCCTA+AGG - chr1_1:3312806-3312825 Msa0001650:intron 40.0%
CTTGTTAACAAGTGCCCTAA+GGG - chr1_1:3312807-3312826 Msa0001650:intron 40.0%
ATCCTTAACAAGTGCCCTTA+GGG + chr1_1:3312824-3312843 None:intergenic 40.0%
TATCCTTAACAAGTGCCCTT+AGG + chr1_1:3312825-3312844 None:intergenic 40.0%
TTAACAAGTGCCCTTACCTA+AGG - chr1_1:3312950-3312969 Msa0001650:intron 40.0%
TAACAAGTGCCCTTACCTAA+GGG - chr1_1:3312951-3312970 Msa0001650:intron 40.0%
TAACAAGTGCCCTTAGGTAA+GGG + chr1_1:3312963-3312982 None:intergenic 40.0%
AAATGCTAACAAGTGCCCTT+AGG + chr1_1:3312969-3312988 None:intergenic 40.0%
TGAAACAAATCTGACCAGAG+TGG + chr1_1:3313106-3313125 None:intergenic 40.0%
TTCTCTCGTGCAACAGATAT+TGG - chr1_1:3313185-3313204 Msa0001650:intron 40.0%
TCTCTCGTGCAACAGATATT+GGG - chr1_1:3313186-3313205 Msa0001650:intron 40.0%
AGTATATAACCTGCTACTCC+TGG + chr1_1:3313263-3313282 None:intergenic 40.0%
GACTGGTAACAAACAAGGAA+AGG + chr1_1:3313345-3313364 None:intergenic 40.0%
ATTAACTCTGTTCCAGAGAC+TGG + chr1_1:3313362-3313381 None:intergenic 40.0%
!! GTATTTGGTGCTCCAATAGA+AGG - chr1_1:3313382-3313401 Msa0001650:CDS 40.0%
GATTGCGTTGCATAAAACTC+TGG + chr1_1:3313748-3313767 None:intergenic 40.0%
TCTGTTCACCAGGAAGATAA+AGG - chr1_1:3313783-3313802 Msa0001650:intron 40.0%
CTGTTCACCAGGAAGATAAA+GGG - chr1_1:3313784-3313803 Msa0001650:intron 40.0%
TGTTCACCAGGAAGATAAAG+GGG - chr1_1:3313785-3313804 Msa0001650:intron 40.0%
! CTAGATTTTGTGGTCGATCT+TGG - chr1_1:3313856-3313875 Msa0001650:intron 40.0%
AAAGAGTTGGGATTGTTAGG+GGG - chr1_1:3314054-3314073 Msa0001650:intron 40.0%
TATAGCTTATAGCTGAAGCC+TGG - chr1_1:3314515-3314534 Msa0001650:CDS 40.0%
ATAGCTTATAGCTGAAGCCT+GGG - chr1_1:3314516-3314535 Msa0001650:CDS 40.0%
GTATTTGGTCGGAATGGAAT+GGG - chr1_1:3314581-3314600 Msa0001650:intron 40.0%
GACTGGAAAATGAAAGGATG+TGG - chr1_1:3314661-3314680 Msa0001650:intron 40.0%
ATTACAAGAATAACTGCGCG+AGG - chr1_1:3314868-3314887 Msa0001650:intron 40.0%
CAGATGATTCTTCGCTTTAG+AGG + chr1_1:3315018-3315037 None:intergenic 40.0%
CTAAAGCGAAGAATCATCTG+AGG - chr1_1:3315018-3315037 Msa0001650:intron 40.0%
! ACTTGATGCTTTAGATGAGC+TGG - chr1_1:3315047-3315066 Msa0001650:intron 40.0%
TCTGGTTGTCCTAGTAAAAC+TGG + chr1_1:3315216-3315235 None:intergenic 40.0%
! AGTTTTACTAGGACAACCAG+AGG - chr1_1:3315215-3315234 Msa0001650:intron 40.0%
TACACATATCATCACTCCTC+TGG + chr1_1:3315234-3315253 None:intergenic 40.0%
GGAAAATAGACCACAGACTT+TGG + chr1_1:3315313-3315332 None:intergenic 40.0%
GATCTCTGTAACCTATTGAG+TGG - chr1_1:3315396-3315415 Msa0001650:intron 40.0%
GTATGCAATAGCCACTCAAT+AGG + chr1_1:3315410-3315429 None:intergenic 40.0%
ACTGTACGCCAGTTTATCAA+GGG - chr1_1:3315544-3315563 Msa0001650:intron 40.0%
CATCTGTACCCTTGATAAAC+TGG + chr1_1:3315555-3315574 None:intergenic 40.0%
! CAGTTTATCAAGGGTACAGA+TGG - chr1_1:3315553-3315572 Msa0001650:intron 40.0%
! TGGGAGTCCTAATTTGTATC+AGG - chr1_1:3315606-3315625 Msa0001650:intron 40.0%
! TACCTTGTTCTTTTGTGTGG+TGG - chr1_1:3315865-3315884 Msa0001650:intron 40.0%
AACCTTGTATGTGCTCATGA+TGG - chr1_1:3315940-3315959 Msa0001650:intron 40.0%
AGAAGATACGTGCAACAATC+TGG + chr1_1:3316264-3316283 None:intergenic 40.0%
GCTAGTGTAAACACACACAT+GGG + chr1_1:3316568-3316587 None:intergenic 40.0%
GTGCCTCAGTAAAGAAATTG+AGG - chr1_1:3316782-3316801 Msa0001650:intron 40.0%
AGTATGTTACAGAAGTCCAG+TGG + chr1_1:3316909-3316928 None:intergenic 40.0%
CTTCTGTAACATACTCCCTT+TGG - chr1_1:3316914-3316933 Msa0001650:intron 40.0%
! CATCGGTTATTCAATGAACC+TGG + chr1_1:3316990-3317009 None:intergenic 40.0%
! TCTGACTTTTATACGGCAGA+TGG - chr1_1:3317123-3317142 Msa0001650:intron 40.0%
! ACTTTTATACGGCAGATGGA+GGG - chr1_1:3317127-3317146 Msa0001650:intron 40.0%
TTCTTTAAGCAGTGCCTGTA+GGG + chr1_1:3317202-3317221 None:intergenic 40.0%
ATTCTTTAAGCAGTGCCTGT+AGG + chr1_1:3317203-3317222 None:intergenic 40.0%
TTAACTAGCCCATGAGTGAT+TGG - chr1_1:3317310-3317329 Msa0001650:intron 40.0%
CAAAAAAACTAGTCCCTGAG+AGG - chr1_1:3317334-3317353 Msa0001650:intron 40.0%
GATGATATTGTTGGCAACAC+AGG - chr1_1:3317449-3317468 Msa0001650:intron 40.0%
GGGAGTTCCGATGATATATA+TGG - chr1_1:3317503-3317522 Msa0001650:intron 40.0%
AAATCTGAAGAAGTCTGACG+AGG + chr1_1:3317706-3317725 None:intergenic 40.0%
! GAATGCAACAGAGTACTTAC+TGG + chr1_1:3317752-3317771 None:intergenic 40.0%
GTACTCTGTTGCATTCTTCT+AGG - chr1_1:3317756-3317775 Msa0001650:intron 40.0%
TTCTAATGCTGTAATCCTGC+AGG - chr1_1:3317799-3317818 Msa0001650:intron 40.0%
TCTAATGCTGTAATCCTGCA+GGG - chr1_1:3317800-3317819 Msa0001650:intron 40.0%
!! AGTCTGGTGTTACAGGAAAA+TGG + chr1_1:3317884-3317903 None:intergenic 40.0%
! ATTTTCCTGTAACACCAGAC+TGG - chr1_1:3317883-3317902 Msa0001650:intron 40.0%
AGCTACTGGAATCACATCTT+AGG - chr1_1:3317994-3318013 Msa0001650:CDS 40.0%
! AAGATTTGGTTAGTGCAGAG+CGG + chr1_1:3318067-3318086 None:intergenic 40.0%
AAACGTGGACGCTTAAGATT+TGG + chr1_1:3318081-3318100 None:intergenic 40.0%
! TTGTTGTTCACTGTCAAACG+TGG + chr1_1:3318096-3318115 None:intergenic 40.0%
TTGACAGAGAAGGTAGACAA+GGG + chr1_1:3318233-3318252 None:intergenic 40.0%
! AAAAGCTCCAACAAGTTGAG+AGG - chr1_1:3318305-3318324 Msa0001650:intron 40.0%
ATATATCTGTATGCCCAGCT+AGG - chr1_1:3318387-3318406 Msa0001650:intron 40.0%
AACGTACATCTTCTGTCAAG+TGG + chr1_1:3318477-3318496 None:intergenic 40.0%
AGGTAGCAAACAGTCACAAT+AGG + chr1_1:3318521-3318540 None:intergenic 40.0%
CTCCCCAATTCCAATTTGAA+CGG - chr1_1:3318539-3318558 Msa0001650:CDS 40.0%
GCATCCGTTCAAATTGGAAT+TGG + chr1_1:3318546-3318565 None:intergenic 40.0%
! TAGAACTTTTGACCAGATCC+TGG - chr1_1:3318647-3318666 Msa0001650:CDS 40.0%
CGGTTAATGAAGCTATTGAG+AGG + chr1_1:3318736-3318755 None:intergenic 40.0%
CTTCTTGCATTACCTTTGCT+TGG - chr1_1:3318835-3318854 Msa0001650:CDS 40.0%
! TTTTCATGCCAAATAAGGGG+GGG + chr1_1:3318883-3318902 None:intergenic 40.0%
TCTGGCAAGGTAATAGTGAA+AGG + chr1_1:3318966-3318985 None:intergenic 40.0%
ATCATATGGTGCTTTCTTGC+TGG + chr1_1:3319024-3319043 None:intergenic 40.0%
ACTAAGCATGGGATACATCT+TGG + chr1_1:3319111-3319130 None:intergenic 40.0%
AAGCTAAGCATTTACATCGG+GGG + chr1_1:3319159-3319178 None:intergenic 40.0%
CAAGCTAAGCATTTACATCG+GGG + chr1_1:3319160-3319179 None:intergenic 40.0%
CGTGTAGCAAATATACTACG+CGG - chr1_1:3319240-3319259 Msa0001650:five_prime_UTR 40.0%
GTGTAGCAAATATACTACGC+GGG - chr1_1:3319241-3319260 Msa0001650:five_prime_UTR 40.0%
GAAAGAGGAGAGAGAATGTG+AGG + chr1_1:3308814-3308833 None:intergenic 45.0%
AAGAAGAAAACCTTCGCCGT+TGG - chr1_1:3308925-3308944 Msa0001650:CDS 45.0%
AGAAGAAAACCTTCGCCGTT+GGG - chr1_1:3308926-3308945 Msa0001650:CDS 45.0%
CGCCAATTGCAAGTTTCCAA+AGG - chr1_1:3308997-3309016 Msa0001650:CDS 45.0%
AAATTGACCCCGTCTTCTTG+AGG + chr1_1:3309048-3309067 None:intergenic 45.0%
TCATAGTAGTGACCGTGTTG+AGG + chr1_1:3309354-3309373 None:intergenic 45.0%
TAGGACCTGATGGTAATTGC+TGG - chr1_1:3309677-3309696 Msa0001650:intron 45.0%
AGGTACCATACCAGCCATTT+GGG + chr1_1:3309704-3309723 None:intergenic 45.0%
! AAGGTACCATACCAGCCATT+TGG + chr1_1:3309705-3309724 None:intergenic 45.0%
! GGTACCTTTTGATCATGAGG+AGG - chr1_1:3309717-3309736 Msa0001650:intron 45.0%
ACGACACCAAGATATGTACC+AGG + chr1_1:3309957-3309976 None:intergenic 45.0%
!! TGGTACATATCTTGGTGTCG+TGG - chr1_1:3309956-3309975 Msa0001650:intron 45.0%
ACAACTGAGTCTCCTAGTCT+TGG - chr1_1:3310430-3310449 Msa0001650:intron 45.0%
! TTGGTGCCTTGTGTTGTTGT+TGG - chr1_1:3310449-3310468 Msa0001650:intron 45.0%
ATACAATTCTCCCATGCTGC+TGG - chr1_1:3310525-3310544 Msa0001650:intron 45.0%
! TTTTGTGGATCCAGCAGCAT+GGG + chr1_1:3310538-3310557 None:intergenic 45.0%
! TTTTTGTGGATCCAGCAGCA+TGG + chr1_1:3310539-3310558 None:intergenic 45.0%
ATGCTATTCAGGGGGACTAT+AGG - chr1_1:3310747-3310766 Msa0001650:intron 45.0%
GCAAGGGGACTATTGTGTAA+TGG - chr1_1:3311074-3311093 Msa0001650:intron 45.0%
TCAGCTGGCATACAAAACTG+TGG - chr1_1:3311351-3311370 Msa0001650:intron 45.0%
ATACAAAACTGTGGCCGTGA+TGG - chr1_1:3311360-3311379 Msa0001650:intron 45.0%
TACAAAACTGTGGCCGTGAT+GGG - chr1_1:3311361-3311380 Msa0001650:intron 45.0%
CCTGCTCCAGTAATATAGCA+AGG + chr1_1:3311512-3311531 None:intergenic 45.0%
! CCTTGCTATATTACTGGAGC+AGG - chr1_1:3311509-3311528 Msa0001650:intron 45.0%
TACAGCTGAAGGGAATGAGA+AGG - chr1_1:3311557-3311576 Msa0001650:intron 45.0%
ACAGCTGAAGGGAATGAGAA+GGG - chr1_1:3311558-3311577 Msa0001650:intron 45.0%
CCCCCTAAAGACACAAAAGT+GGG + chr1_1:3312417-3312436 None:intergenic 45.0%
!! CCCACTTTTGTGTCTTTAGG+GGG - chr1_1:3312414-3312433 Msa0001650:intron 45.0%
TCCCCCTAAAGACACAAAAG+TGG + chr1_1:3312418-3312437 None:intergenic 45.0%
ATTGCAACCATCCCGTTGTA+AGG - chr1_1:3312473-3312492 Msa0001650:intron 45.0%
! TGCTGTTAGTCTGCATCCAT+TGG - chr1_1:3312720-3312739 Msa0001650:intron 45.0%
CTAACAAGTGCCCTTAGGTA+AGG + chr1_1:3312964-3312983 None:intergenic 45.0%
CACTTTATTGCACTCCACTC+TGG - chr1_1:3313089-3313108 Msa0001650:intron 45.0%
TTGGGTAACAGAAATGCACG+TGG - chr1_1:3313204-3313223 Msa0001650:intron 45.0%
GTAACAGAAATGCACGTGGA+TGG - chr1_1:3313208-3313227 Msa0001650:intron 45.0%
CTATTATGACCAGGAGTAGC+AGG - chr1_1:3313251-3313270 Msa0001650:intron 45.0%
CCAGAGACTGGTAACAAACA+AGG + chr1_1:3313350-3313369 None:intergenic 45.0%
! CCTTGTTTGTTACCAGTCTC+TGG - chr1_1:3313347-3313366 Msa0001650:CDS 45.0%
GTCAGCAAGTCACCTTCTAT+TGG + chr1_1:3313397-3313416 None:intergenic 45.0%
!! GAAGGTGACTTGCTGACAAT+TGG - chr1_1:3313400-3313419 Msa0001650:CDS 45.0%
!! TCAATGGCGGACTGCTTAAA+GGG + chr1_1:3313429-3313448 None:intergenic 45.0%
!! ATCAATGGCGGACTGCTTAA+AGG + chr1_1:3313430-3313449 None:intergenic 45.0%
TCCAATACTTCGTGGAGTGA+AGG - chr1_1:3313468-3313487 Msa0001650:intron 45.0%
ACCTTCACTCCACGAAGTAT+TGG + chr1_1:3313472-3313491 None:intergenic 45.0%
TAGCTAAACGGTCACGTATG+TGG - chr1_1:3313985-3314004 Msa0001650:intron 45.0%
! AGGGGGAAGTGTATAACACA+AGG - chr1_1:3314071-3314090 Msa0001650:intron 45.0%
TTGCAATCGGCATTCACTGT+TGG - chr1_1:3314315-3314334 Msa0001650:intron 45.0%
GGTATTTGGTCGGAATGGAA+TGG - chr1_1:3314580-3314599 Msa0001650:intron 45.0%
ATGTGGTAGCACAGCTTGAA+CGG - chr1_1:3314678-3314697 Msa0001650:CDS 45.0%
! AACAGGCTACAAGGTTAGTC+AGG + chr1_1:3314840-3314859 None:intergenic 45.0%
GTTACAGAGATCTGCTTACG+CGG + chr1_1:3315388-3315407 None:intergenic 45.0%
CACTGTACGCCAGTTTATCA+AGG - chr1_1:3315543-3315562 Msa0001650:intron 45.0%
GTCCACCACACAAAAGAACA+AGG + chr1_1:3315870-3315889 None:intergenic 45.0%
TACAGGGAGGAAGAAAACCA+TGG - chr1_1:3315908-3315927 Msa0001650:intron 45.0%
AGCCATCATGAGCACATACA+AGG + chr1_1:3315945-3315964 None:intergenic 45.0%
TGGCTTCACTCTAGCTGATT+TGG - chr1_1:3315960-3315979 Msa0001650:intron 45.0%
CACAATAGTAGCTGGAACTG+TGG - chr1_1:3316042-3316061 Msa0001650:intron 45.0%
CATATGTTACACGCAGCTGA+GGG + chr1_1:3316298-3316317 None:intergenic 45.0%
TCATATGTTACACGCAGCTG+AGG + chr1_1:3316299-3316318 None:intergenic 45.0%
CGCTAGTGTAAACACACACA+TGG + chr1_1:3316569-3316588 None:intergenic 45.0%
AGGATTCAGAAAGTGAGGTG+TGG + chr1_1:3316647-3316666 None:intergenic 45.0%
TCTTTCTCTCATGGTTTCCC+AGG - chr1_1:3316828-3316847 Msa0001650:intron 45.0%
!! ACTGTGCTGTTGACTTACCT+GGG + chr1_1:3316848-3316867 None:intergenic 45.0%
!! AACTGTGCTGTTGACTTACC+TGG + chr1_1:3316849-3316868 None:intergenic 45.0%
! GACTTTTATACGGCAGATGG+AGG - chr1_1:3317126-3317145 Msa0001650:intron 45.0%
! CTTTTATACGGCAGATGGAG+GGG - chr1_1:3317128-3317147 Msa0001650:intron 45.0%
ATTAAGCTGCAAAAAGGCCG+AGG + chr1_1:3317655-3317674 None:intergenic 45.0%
! TGCAACAGAGTACTTACTGG+CGG + chr1_1:3317749-3317768 None:intergenic 45.0%
!! GTCTGAATCTAGCCGTTTTG+TGG - chr1_1:3317905-3317924 Msa0001650:intron 45.0%
CCAGGGTAAAAGCCACAAAA+CGG + chr1_1:3317920-3317939 None:intergenic 45.0%
! GGGGACTTCTGAAAAAGTTG+GGG + chr1_1:3318212-3318231 None:intergenic 45.0%
! GGGGGACTTCTGAAAAAGTT+GGG + chr1_1:3318213-3318232 None:intergenic 45.0%
! AGGGGGACTTCTGAAAAAGT+TGG + chr1_1:3318214-3318233 None:intergenic 45.0%
TGACAGAGAAGGTAGACAAG+GGG + chr1_1:3318232-3318251 None:intergenic 45.0%
GTTGACAGAGAAGGTAGACA+AGG + chr1_1:3318234-3318253 None:intergenic 45.0%
TGCTTGATGCTGCTGTTCTA+AGG - chr1_1:3318423-3318442 Msa0001650:intron 45.0%
CGTTCAAATTGGAATTGGGG+AGG + chr1_1:3318541-3318560 None:intergenic 45.0%
CTACTGATGCTAATCTGAGC+AGG + chr1_1:3318704-3318723 None:intergenic 45.0%
! AGAGCGTCCTGGATACATAT+GGG - chr1_1:3318983-3319002 Msa0001650:CDS 45.0%
AGAGGTTCCCATATGTATCC+AGG + chr1_1:3318993-3319012 None:intergenic 45.0%
TTTCTCACACCTGATCTTCC+CGG - chr1_1:3319044-3319063 Msa0001650:CDS 45.0%
ATATCTCTTCCGGGAAGATC+AGG + chr1_1:3319056-3319075 None:intergenic 45.0%
!!! ATTTAAATTTTTAATAATGT+TGG + chr1_1:3312253-3312272 None:intergenic 5.0%
!!! TTTAAGTTTTTTTTTTTTTT+TGG - chr1_1:3313540-3313559 Msa0001650:intron 5.0%
!!! TTAAGTTTTTTTTTTTTTTT+GGG - chr1_1:3313541-3313560 Msa0001650:intron 5.0%
AACACCGACACGATTCCCAA+CGG + chr1_1:3308944-3308963 None:intergenic 50.0%
AAAGGCTACCCTTCACCCTA+CGG - chr1_1:3309015-3309034 Msa0001650:intron 50.0%
AGAGGAGAGTTTGGGGAAGT+AGG - chr1_1:3309658-3309677 Msa0001650:intron 50.0%
TTTGGGGAAGTAGGACCTGA+TGG - chr1_1:3309667-3309686 Msa0001650:intron 50.0%
TGGTAATTGCTGGCCCCAAA+TGG - chr1_1:3309687-3309706 Msa0001650:intron 50.0%
GGTACCATACCAGCCATTTG+GGG + chr1_1:3309703-3309722 None:intergenic 50.0%
AGTCTTTCCATCTGCCACTG+AGG + chr1_1:3310261-3310280 None:intergenic 50.0%
! CAACACAAGGCACCAAGACT+AGG + chr1_1:3310445-3310464 None:intergenic 50.0%
GCTTGTGTGCCTCTTTGATG+AGG + chr1_1:3311404-3311423 None:intergenic 50.0%
! ATCAAAGAGGCACACAAGCG+AGG - chr1_1:3311405-3311424 Msa0001650:intron 50.0%
GTATTACATGGTGGCACCCA+AGG - chr1_1:3311617-3311636 Msa0001650:intron 50.0%
CAGAAGCAACAAGACATGGC+AGG - chr1_1:3312083-3312102 Msa0001650:intron 50.0%
GGTCTAGTTGACATTACCCG+TGG + chr1_1:3312396-3312415 None:intergenic 50.0%
!! TGCCCTAAGGGCACTTGTTA+AGG - chr1_1:3312819-3312838 Msa0001650:intron 50.0%
!! CAATGGCGGACTGCTTAAAG+GGG + chr1_1:3313428-3313447 None:intergenic 50.0%
!! GGAAAGTGCCAACTTGGTAC+AGG + chr1_1:3314552-3314571 None:intergenic 50.0%
!! AGTGAGGGAAAGTGCCAACT+TGG + chr1_1:3314558-3314577 None:intergenic 50.0%
AAGTTGGCACTTTCCCTCAC+TGG - chr1_1:3314557-3314576 Msa0001650:CDS 50.0%
AGTTGGCACTTTCCCTCACT+GGG - chr1_1:3314558-3314577 Msa0001650:CDS 50.0%
! CTTTCCCTCACTGGGGTATT+TGG - chr1_1:3314566-3314585 Msa0001650:intron 50.0%
! ACTGGGGTATTTGGTCGGAA+TGG - chr1_1:3314575-3314594 Msa0001650:intron 50.0%
TTGGTCGGAATGGAATGGGA+AGG - chr1_1:3314585-3314604 Msa0001650:intron 50.0%
! AAGGGTACAGATGGCTTTGC+TGG - chr1_1:3315562-3315581 Msa0001650:intron 50.0%
TAGTAGCTGGAACTGTGGAG+AGG - chr1_1:3316047-3316066 Msa0001650:intron 50.0%
TGTGGTGCGTCCATTTAAGC+GGG + chr1_1:3316629-3316648 None:intergenic 50.0%
GTGTGGTGCGTCCATTTAAG+CGG + chr1_1:3316630-3316649 None:intergenic 50.0%
TGCAACCAAACACCCTCTCA+GGG + chr1_1:3317350-3317369 None:intergenic 50.0%
TTGCAACCAAACACCCTCTC+AGG + chr1_1:3317351-3317370 None:intergenic 50.0%
ACTGGCGGAACTTGGTCAAA+AGG + chr1_1:3317734-3317753 None:intergenic 50.0%
GAGTACTTACTGGCGGAACT+TGG + chr1_1:3317742-3317761 None:intergenic 50.0%
CTGATGTCGGGAAGTCATCT+AGG + chr1_1:3317842-3317861 None:intergenic 50.0%
ATGACTTCCCGACATCAGAG+AGG - chr1_1:3317844-3317863 Msa0001650:intron 50.0%
ACTGAAGCCTCTCTGATGTC+GGG + chr1_1:3317854-3317873 None:intergenic 50.0%
CACTGAAGCCTCTCTGATGT+CGG + chr1_1:3317855-3317874 None:intergenic 50.0%
!! TCAGACCAGTCTGGTGTTAC+AGG + chr1_1:3317891-3317910 None:intergenic 50.0%
! CCGTTTTGTGGCTTTTACCC+TGG - chr1_1:3317917-3317936 Msa0001650:intron 50.0%
GGCAACAGAGTTTCGTACCA+GGG + chr1_1:3317937-3317956 None:intergenic 50.0%
TGGCAACAGAGTTTCGTACC+AGG + chr1_1:3317938-3317957 None:intergenic 50.0%
GACAGAGAAGGTAGACAAGG+GGG + chr1_1:3318231-3318250 None:intergenic 50.0%
GCAGGACAGGTTTGCATGAA+GGG + chr1_1:3318686-3318705 None:intergenic 50.0%
AGCAGGACAGGTTTGCATGA+AGG + chr1_1:3318687-3318706 None:intergenic 50.0%
GATGCTAATCTGAGCAGGAC+AGG + chr1_1:3318699-3318718 None:intergenic 50.0%
!! AACTCAGATGGACTCGGTGA+AGG - chr1_1:3318905-3318924 Msa0001650:CDS 50.0%
!! ACTCAGATGGACTCGGTGAA+GGG - chr1_1:3318906-3318925 Msa0001650:CDS 50.0%
CATATGTATCCAGGACGCTC+TGG + chr1_1:3318984-3319003 None:intergenic 50.0%
! CAGAGCGTCCTGGATACATA+TGG - chr1_1:3318982-3319001 Msa0001650:CDS 50.0%
TTCTTGCTGGTGTCTACGAG+AGG + chr1_1:3319011-3319030 None:intergenic 50.0%
TTCGCCGTTGGGAATCGTGT+CGG - chr1_1:3308937-3308956 Msa0001650:CDS 55.0%
GTAGGGTGAAGGGTAGCCTT+TGG + chr1_1:3309016-3309035 None:intergenic 55.0%
TCTTGAGGAGTGGCACCGTA+GGG + chr1_1:3309033-3309052 None:intergenic 55.0%
TTCTTGAGGAGTGGCACCGT+AGG + chr1_1:3309034-3309053 None:intergenic 55.0%
!! GGTGCCACTCCTCAAGAAGA+CGG - chr1_1:3309036-3309055 Msa0001650:intron 55.0%
! GTGCCACTCCTCAAGAAGAC+GGG - chr1_1:3309037-3309056 Msa0001650:intron 55.0%
TGCCACTCCTCAAGAAGACG+GGG - chr1_1:3309038-3309057 Msa0001650:intron 55.0%
TGGGGCCAGCAATTACCATC+AGG + chr1_1:3309685-3309704 None:intergenic 55.0%
AATTGCTGGCCCCAAATGGC+TGG - chr1_1:3309691-3309710 Msa0001650:intron 55.0%
TCGAGTAAGGCCGAGTTTCC+TGG - chr1_1:3309936-3309955 Msa0001650:intron 55.0%
! TCTACACGTGTGGCTCTGTG+CGG - chr1_1:3311203-3311222 Msa0001650:intron 55.0%
GGCACACAAGCGAGGAATAG+AGG - chr1_1:3311413-3311432 Msa0001650:intron 55.0%
ATAGCTGAAGCCTGGGATGC+TGG - chr1_1:3314523-3314542 Msa0001650:CDS 55.0%
GTTGGCACTTTCCCTCACTG+GGG - chr1_1:3314559-3314578 Msa0001650:CDS 55.0%
CCGACCAAATACCCCAGTGA+GGG + chr1_1:3314573-3314592 None:intergenic 55.0%
! CCCTCACTGGGGTATTTGGT+CGG - chr1_1:3314570-3314589 Msa0001650:intron 55.0%
TCCGACCAAATACCCCAGTG+AGG + chr1_1:3314574-3314593 None:intergenic 55.0%
! AGAGGGCATAGCCCAAAGTC+AGG + chr1_1:3314793-3314812 None:intergenic 55.0%
! CTAACACGGGGAGCATGTAG+AGG + chr1_1:3315354-3315373 None:intergenic 55.0%
CACGCAGCTGAGGGAGAAAA+TGG + chr1_1:3316289-3316308 None:intergenic 55.0%
AAATGCCAGCCATGCCCTAC+AGG - chr1_1:3317185-3317204 Msa0001650:CDS 55.0%
TAAGCAGTGCCTGTAGGGCA+TGG + chr1_1:3317197-3317216 None:intergenic 55.0%
!! CTAGTCCCTGAGAGGGTGTT+TGG - chr1_1:3317342-3317361 Msa0001650:intron 55.0%
GGCGGAACTTGGTCAAAAGG+CGG + chr1_1:3317731-3317750 None:intergenic 55.0%
AAGCGACTCACATTCCCTGC+AGG + chr1_1:3317817-3317836 None:intergenic 55.0%
TGCAGGGAATGTGAGTCGCT+TGG - chr1_1:3317816-3317835 Msa0001650:intron 55.0%
CGACATCAGAGAGGCTTCAG+TGG - chr1_1:3317853-3317872 Msa0001650:intron 55.0%
TCAGAGAGGCTTCAGTGGCA+TGG - chr1_1:3317858-3317877 Msa0001650:intron 55.0%
CGGCTAGATTCAGACCAGTC+TGG + chr1_1:3317900-3317919 None:intergenic 55.0%
! ATTACCTTGCCAGAGCGTCC+TGG - chr1_1:3318972-3318991 Msa0001650:CDS 55.0%
! TTACATCGGGGGTGCGCAAA+AGG + chr1_1:3319148-3319167 None:intergenic 55.0%
ACTACGCGGGATCTGTTGCA+AGG - chr1_1:3319254-3319273 Msa0001650:five_prime_UTR 55.0%
GACACGATTCCCAACGGCGA+AGG + chr1_1:3308938-3308957 None:intergenic 60.0%
GAGTGGCACCGTAGGGTGAA+GGG + chr1_1:3309026-3309045 None:intergenic 60.0%
GACCCCGTCTTCTTGAGGAG+TGG + chr1_1:3309043-3309062 None:intergenic 60.0%
CTGGCCCCAAATGGCTGGTA+TGG - chr1_1:3309696-3309715 Msa0001650:intron 60.0%
GCTGGAGGCCTGTACCAAGT+TGG - chr1_1:3314541-3314560 Msa0001650:CDS 60.0%
GTATCCAGGACGCTCTGGCA+AGG + chr1_1:3318979-3318998 None:intergenic 60.0%
ACGCGGGATCTGTTGCAAGG+TGG - chr1_1:3319257-3319276 Msa0001650:five_prime_UTR 60.0%
GGAGTGGCACCGTAGGGTGA+AGG + chr1_1:3309027-3309046 None:intergenic 65.0%
GCTGAAGCCTGGGATGCTGG+AGG - chr1_1:3314526-3314545 Msa0001650:CDS 65.0%
GTACAGGCCTCCAGCATCCC+AGG + chr1_1:3314536-3314555 None:intergenic 65.0%
CAGTGCCTGTAGGGCATGGC+TGG + chr1_1:3317193-3317212 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 3308599 3319342 3308599 ID=Msa0001650;Name=Msa0001650
chr1_1 mRNA 3308599 3319342 3308599 ID=Msa0001650-mRNA-1;Parent=Msa0001650;Name=Msa0001650-mRNA-1;_AED=0.09;_eAED=0.09;_QI=194|1|1|1|1|1|18|167|787
chr1_1 exon 3308599 3309029 3308599 ID=Msa0001650-mRNA-1:exon:929;Parent=Msa0001650-mRNA-1
chr1_1 exon 3310003 3310120 3310003 ID=Msa0001650-mRNA-1:exon:928;Parent=Msa0001650-mRNA-1
chr1_1 exon 3310190 3310272 3310190 ID=Msa0001650-mRNA-1:exon:927;Parent=Msa0001650-mRNA-1
chr1_1 exon 3310357 3310437 3310357 ID=Msa0001650-mRNA-1:exon:926;Parent=Msa0001650-mRNA-1
chr1_1 exon 3311092 3311175 3311092 ID=Msa0001650-mRNA-1:exon:925;Parent=Msa0001650-mRNA-1
chr1_1 exon 3311873 3312028 3311873 ID=Msa0001650-mRNA-1:exon:924;Parent=Msa0001650-mRNA-1
chr1_1 exon 3312314 3312406 3312314 ID=Msa0001650-mRNA-1:exon:923;Parent=Msa0001650-mRNA-1
chr1_1 exon 3313335 3313421 3313335 ID=Msa0001650-mRNA-1:exon:922;Parent=Msa0001650-mRNA-1
chr1_1 exon 3314452 3314578 3314452 ID=Msa0001650-mRNA-1:exon:921;Parent=Msa0001650-mRNA-1
chr1_1 exon 3314669 3314740 3314669 ID=Msa0001650-mRNA-1:exon:920;Parent=Msa0001650-mRNA-1
chr1_1 exon 3315423 3315508 3315423 ID=Msa0001650-mRNA-1:exon:919;Parent=Msa0001650-mRNA-1
chr1_1 exon 3316303 3316410 3316303 ID=Msa0001650-mRNA-1:exon:918;Parent=Msa0001650-mRNA-1
chr1_1 exon 3316507 3316648 3316507 ID=Msa0001650-mRNA-1:exon:917;Parent=Msa0001650-mRNA-1
chr1_1 exon 3317173 3317264 3317173 ID=Msa0001650-mRNA-1:exon:916;Parent=Msa0001650-mRNA-1
chr1_1 exon 3317943 3318095 3317943 ID=Msa0001650-mRNA-1:exon:915;Parent=Msa0001650-mRNA-1
chr1_1 exon 3318203 3318295 3318203 ID=Msa0001650-mRNA-1:exon:914;Parent=Msa0001650-mRNA-1
chr1_1 exon 3318534 3318716 3318534 ID=Msa0001650-mRNA-1:exon:913;Parent=Msa0001650-mRNA-1
chr1_1 exon 3318807 3319342 3318807 ID=Msa0001650-mRNA-1:exon:912;Parent=Msa0001650-mRNA-1
chr1_1 five_prime_UTR 3319149 3319342 3319149 ID=Msa0001650-mRNA-1:five_prime_utr;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3318807 3319148 3318807 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3318534 3318716 3318534 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3318203 3318295 3318203 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3317943 3318095 3317943 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3317173 3317264 3317173 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3316507 3316648 3316507 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3316303 3316410 3316303 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3315423 3315508 3315423 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3314669 3314740 3314669 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3314452 3314578 3314452 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3313335 3313421 3313335 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3312314 3312406 3312314 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3311873 3312028 3311873 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3311092 3311175 3311092 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3310357 3310437 3310357 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3310190 3310272 3310190 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3310003 3310120 3310003 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 CDS 3308766 3309029 3308766 ID=Msa0001650-mRNA-1:cds;Parent=Msa0001650-mRNA-1
chr1_1 three_prime_UTR 3308599 3308765 3308599 ID=Msa0001650-mRNA-1:three_prime_utr;Parent=Msa0001650-mRNA-1
Gene Sequence

>Msa0001650

ATGGCAATGGCTTGCATTCCTCACATTCTCTCTCCTCTTTCTCACTCTACAACACTTGTTAATCTCATCAACAAAACCAATTTCGAGATTCACAACAGAACCTCCATCACCATTTCCTCAAATTCAAGGTCAAAGAAGAAAACCTTCGCCGTTGGGAATCGTGTCGGTGTTGAGACTGAAACTGCAGTTATCGAAATTGAGAAGCGCCAATTGCAAGTTTCCAAAGGCTACCCTTCACCCTACGGTGCCACTCCTCAAGAAGACGGGGTCAATTTCGCCATTTACTCACTCAATTCACTCTCAGCTACTCTCTGCTTCTTCACTCTTTCTGACTTCAAAAACAATAAAGTGACGGAGTACATTACTCTTGATCCATTGCTGAATAAAACAGGATGTGTTTGGCATGTGTTTCTAAAAGGAGATTTTAAAGATATGCTCTATGCTTATAAATTTGATGGCAAATTTTCTCCTCAACACGGTCACTACTATGATTCTTCTCGTATTTTAATCGACCCTTACGCAAAAGCAGTTATAAGAAGAGGAGAGTTTGGGGAAGTAGGACCTGATGGTAATTGCTGGCCCCAAATGGCTGGTATGGTACCTTTTGATCATGAGGAGTTTGACTGGGAAGGTGACTTGCCTTTGAAATATCCACAAAAGGATCTTATTATATATGAAATGCATGTGAGAGGGTTTACAAAGCATGAGTCGAGTAAGGCCGAGTTTCCTGGTACATATCTTGGTGTCGTGGAGAAGCTTGATCACTTAAAGGAACTTGGAGTAAATTGTATAGAATTAATGCCATGTCATGAGTTCAATGAGCTGGAATACTACAGTTACAATGCTATTCAGGGGGACTATAGGGTCAATTTTTGGGGCTATTCAACCATCAATTACTTTTCACCAATGATAAGATACTCATCAGCTGGCATACAAAACTGTGGCCGTGATGGGATTAATGAAATGAAGCTCCTCATCAAAGAGGCACACAAGCGAGGAATAGAGGTTATCATGGATGTTGTTTTCAATCATACAGCTGAAGGGAATGAGAAGGGTCCCATTATTTCTTTTAGAGGAGTTGACAATAGCGTGTATTACATGGTGGCACCCAAGGGGGAATTCTACAACTATTCAGGATGTGGGAACACATTTAATTGCAACCATCCCGTTGTAAGGAAATTTATAGTGGACTGCTTAAGATATTGGGTAACAGAAATGCACGTGGATGGTTTTCGCTTTGATCTTGCTTCTATTATGACCAGGAGTAGCAGTCTCTGGAACAGAGTTAATGTATTTGGTGCTCCAATAGAAGGTGACTTGCTGACAATTGGAACCCCTTTAAGCAGTCCGCCATTGATTGATATGATCAGTATTGATCCAATACTTCGTGGAGTGAAGCTTATAGCTGAAGCCTGGGATGCTGGAGGCCTGTACCAAGTTGGCACTTTCCCTCACTGGGGTATTTGGTCGGAATGGAATGGGAAGTACAGAGACACTGTACGCCAGTTTATCAAGGGTACAGATGGCTTTGCTGGAGCATTTGCTGAATGTATTTGTGGGAGTCCTAATTTGTATCAGGGAGGAAGAAAACCATGGAATAGTATTAACCTTGTATGTGCTCATGATGGCTTCACTCTAGCTGATTTGGTTACTTACAACAATAAGCATAACTTGCCCAATGGAGAAGACAACAATGATGGAGAAAATCACAATAGTAGCTGGAACTGTGGAGAGGAGGGGGAGTTTGTCAGTGCCTCAGTAAAGAAATTGAGGAAACGACAAATGCGTAATTTCTTTCTTTCTCTCATGGTTTCCCAGGGAGTTCCGATGATATATATGGGAGATGAATATGGACATACAAAAGGAGGAAACAACAATACCTACTGTCATGATAATTACCTTAATTATTTCCAATGGGACAAAAAGGAAGAATCCTCGTCAGACTTCTTCAGATTTTGCCGCCTTTTGACCAAGTTCCGCCAGGAATGTGAGTCGCTTGGCCTAGATGACTTCCCGACATCAGAGAGGCTTCAGTGGCATGGCCATTTTCCTGTAACACCAGACTGGTCTGAATCTAGCCGTTTTGTGGCTTTTACCCTGATGGACTCGGTGAAGGGAGAAATTTATGTTGCTTTCAATACAAGTCATTTACCTTTCACTATTACCTTGCCAGAGCGTCCTGGATACATATGGGAACCTCTCGTAGACACCAGCAAGAAAGCACCATATGATTTTCTCACACCTGATCTTCCCGGAAGAGATATTGCAATACAGCAGTATGCTCAGTTTCTTGACGCCAAGATGTATCCCATGCTTAGTTACTCTTCAATCATCCTTTTGCGCACCCCCGATGTAAATGCTTAG
Protein sequence

>Msa0001650

MAMACIPHILSPLSHSTTLVNLINKTNFEIHNRTSITISSNSRSKKKTFAVGNRVGVETETAVIEIEKRQLQVSKGYPSPYGATPQEDGVNFAIYSLNSLSATLCFFTLSDFKNNKVTEYITLDPLLNKTGCVWHVFLKGDFKDMLYAYKFDGKFSPQHGHYYDSSRILIDPYAKAVIRRGEFGEVGPDGNCWPQMAGMVPFDHEEFDWEGDLPLKYPQKDLIIYEMHVRGFTKHESSKAEFPGTYLGVVEKLDHLKELGVNCIELMPCHEFNELEYYSYNAIQGDYRVNFWGYSTINYFSPMIRYSSAGIQNCGRDGINEMKLLIKEAHKRGIEVIMDVVFNHTAEGNEKGPIISFRGVDNSVYYMVAPKGEFYNYSGCGNTFNCNHPVVRKFIVDCLRYWVTEMHVDGFRFDLASIMTRSSSLWNRVNVFGAPIEGDLLTIGTPLSSPPLIDMISIDPILRGVKLIAEAWDAGGLYQVGTFPHWGIWSEWNGKYRDTVRQFIKGTDGFAGAFAECICGSPNLYQGGRKPWNSINLVCAHDGFTLADLVTYNNKHNLPNGEDNNDGENHNSSWNCGEEGEFVSASVKKLRKRQMRNFFLSLMVSQGVPMIYMGDEYGHTKGGNNNTYCHDNYLNYFQWDKKEESSSDFFRFCRLLTKFRQECESLGLDDFPTSERLQWHGHFPVTPDWSESSRFVAFTLMDSVKGEIYVAFNTSHLPFTITLPERPGYIWEPLVDTSKKAPYDFLTPDLPGRDIAIQQYAQFLDAKMYPMLSYSSIILLRTPDVNA*