AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0141760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141760 MtrunA17_Chr3g0133251 96.140 544 15 3 1 541 1 541 0.0 1062
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0141760 AT5G49970.1 74.220 481 121 2 61 541 53 530 0.0 765
Msa0141760 AT5G49970.2 74.155 414 95 2 75 488 65 466 0.0 650

Find 144 sgRNAs with CRISPR-Local

Find 458 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTGTAGATATTCCTTC+TGG 0.185585 1_4:-501008 Msa0141760:CDS
CATGAACATTACCTGATTAA+TGG 0.185780 1_4:+500555 None:intergenic
AACTTCTTTGCACAGAATTT+TGG 0.186628 1_4:+500772 None:intergenic
CGTAATAATCATAATCAAAT+TGG 0.195978 1_4:-501050 Msa0141760:CDS
CGTGTTCTTGATTGCCTTGT+TGG 0.221302 1_4:+502621 None:intergenic
ATGAACATTACCTGATTAAT+GGG 0.239677 1_4:+500556 None:intergenic
TTTAAAATTGTTAAGAAAGT+TGG 0.244134 1_4:-502671 Msa0141760:five_prime_UTR
ATTACCCGCAGTTCCGTAAA+TGG 0.255310 1_4:-500238 Msa0141760:intron
TACGAAAAGAAATAAATCTT+TGG 0.292429 1_4:+501069 None:intergenic
TCATTGATGGTACATTTATA+TGG 0.297221 1_4:-502534 Msa0141760:CDS
ACTCATCACACTGAATTATC+AGG 0.310827 1_4:+496309 None:intergenic
GACTGAGTCGGAATCGAAAT+TGG 0.312666 1_4:+502240 None:intergenic
CACATGGATGTTCCAGGATA+TGG 0.314269 1_4:+500673 None:intergenic
TCACGGATCGTATTGCTAAA+AGG 0.325277 1_4:-499374 Msa0141760:CDS
TCACTTTGGTTATAAGCCTT+TGG 0.327823 1_4:-501677 Msa0141760:CDS
ATGTTTGGATTCTCATTTCA+TGG 0.338142 1_4:-501407 Msa0141760:intron
ACGCATCATCAAACCATTTA+CGG 0.338547 1_4:+500225 None:intergenic
ACCTGGTCTTCAAGAAATTC+TGG 0.347595 1_4:+500589 None:intergenic
TTAAAATTGTTAAGAAAGTT+GGG 0.349337 1_4:-502670 Msa0141760:five_prime_UTR
CAACAGCTTCTTGTTGTTTG+AGG 0.350405 1_4:+502212 None:intergenic
CGTTTCAGGGTATTCTTCTC+AGG 0.360589 1_4:-502315 Msa0141760:intron
AAATTCTGTGCAAAGAAGTT+TGG 0.367242 1_4:-500769 Msa0141760:CDS
AACCCAGCATATAGAGGCTT+GGG 0.375181 1_4:+501634 None:intergenic
ATTCTAGTAGATGCCATGTT+TGG 0.376534 1_4:-501422 Msa0141760:CDS
CAATCAAGAACACGCGATTC+TGG 0.377899 1_4:-502612 Msa0141760:five_prime_UTR
GTTGACAAGGCCATAGCATT+TGG 0.383761 1_4:+500182 None:intergenic
TGGATATGTACCAACATATC+AGG 0.404323 1_4:+500942 None:intergenic
TTTGAGGAGGCTTTCCAATT+CGG 0.407800 1_4:+500647 None:intergenic
AAATCATCAAAGGGAGGCCT+TGG 0.412331 1_4:+501095 None:intergenic
TAACAATGGTGGTGATGGTC+TGG 0.413619 1_4:-501719 Msa0141760:CDS
CACCATTTCTAAGCAGAATC+AGG 0.421178 1_4:+496097 None:intergenic
CACAAACTATGAAAGTCAAA+AGG 0.421624 1_4:-499228 Msa0141760:CDS
AGAAATCTCGCTTGCATGAC+AGG 0.429134 1_4:-496927 Msa0141760:intron
GAAACTCTCATGGGTCCTCT+TGG 0.431182 1_4:-502181 Msa0141760:CDS
GTAGAAAATGATCGAATTGT+AGG 0.431980 1_4:+502292 None:intergenic
TACTAGAATGTCAAAGTCCT+TGG 0.435535 1_4:+501436 None:intergenic
GGAGGCAGACCCCATTAATC+AGG 0.438428 1_4:-500566 Msa0141760:intron
CTAAAAGGCTTTGACAAGGA+TGG 0.439667 1_4:-499359 Msa0141760:CDS
GAATTGGTAATGTTGTTGTA+TGG 0.442552 1_4:+502480 None:intergenic
ATTGTCGATCCCTTTCTTGT+CGG 0.451134 1_4:-501483 Msa0141760:CDS
CGGACACACATGGATGTTCC+AGG 0.453352 1_4:+500667 None:intergenic
TACGGAGAAGAATTGAAGAA+AGG 0.456141 1_4:+502401 None:intergenic
ACATCCATGTGTGTCCGAAT+TGG 0.458514 1_4:-500661 Msa0141760:CDS
ACGGAGAAGAATTGAAGAAA+GGG 0.459666 1_4:+502402 None:intergenic
TCTCTGTAGATATTCCTTCT+GGG 0.460526 1_4:-501007 Msa0141760:CDS
TGAAGAGATGCGTTCATTGA+TGG 0.462899 1_4:-502547 Msa0141760:exon
GATTGAGATTGCAGTTCCAT+TGG 0.463149 1_4:-496212 Msa0141760:three_prime_UTR
ATGAATGAGTGATAGTGAAT+TGG 0.474514 1_4:+502464 None:intergenic
ATTTGTTGACGGATAAGAAA+AGG 0.478197 1_4:-502644 Msa0141760:five_prime_UTR
CTTATACTTCCACCATATCC+TGG 0.480379 1_4:-500685 Msa0141760:CDS
CTTCAGCGTCGACCAACTCA+TGG 0.481760 1_4:-502158 Msa0141760:intron
GACCTGATTCTGCTTAGAAA+TGG 0.485110 1_4:-496099 Msa0141760:three_prime_UTR
CGTCCTAGAGGTAGTCAGAT+TGG 0.485609 1_4:-497372 Msa0141760:CDS
GCTTATAACCAAAGTGATGC+AGG 0.486106 1_4:+501683 None:intergenic
TTTCAATTTCAGGAATTGGC+TGG 0.487134 1_4:-502064 Msa0141760:intron
TACGTTCCCCATGAGATAGA+TGG 0.495915 1_4:-496364 Msa0141760:CDS
TTGGGATGGTTTAAACCGAC+AGG 0.496012 1_4:-499162 Msa0141760:intron
TTCTGTGCAAAGAAGTTTGG+CGG 0.497061 1_4:-500766 Msa0141760:CDS
AAGTTGGGTAAATTTGTTGA+CGG 0.501052 1_4:-502655 Msa0141760:five_prime_UTR
TAGAGAAATAATAATAATTG+TGG 0.502102 1_4:+502439 None:intergenic
AGATCTTCCACCGACAAGAA+AGG 0.505249 1_4:+501473 None:intergenic
TTCTGGGTGGCATGTTGAAG+AGG 0.505414 1_4:-500991 Msa0141760:CDS
GTTGAAGAGGGAGATGTTGA+TGG 0.505649 1_4:-500978 Msa0141760:CDS
GCCCGTCACCTGCATCACTT+TGG 0.506219 1_4:-501691 Msa0141760:CDS
AGGAATTAAACCTGATATGT+TGG 0.509098 1_4:-500952 Msa0141760:intron
TAACCCAGCATATAGAGGCT+TGG 0.510047 1_4:+501633 None:intergenic
CGTCGCTACTTCCATATATG+AGG 0.510638 1_4:-502035 Msa0141760:intron
ATATCTACAGAGACTATAAC+CGG 0.511564 1_4:+501017 None:intergenic
ATATGCTGGGTTAGTTACTC+AGG 0.512302 1_4:-501623 Msa0141760:intron
TAATGGGGTCTGCCTCCACC+TGG 0.513228 1_4:+500572 None:intergenic
GTCGATCCCTTTCTTGTCGG+TGG 0.513702 1_4:-501480 Msa0141760:CDS
CTAATTGTCCAGGTTCTCCA+AGG 0.520404 1_4:-501112 Msa0141760:intron
CCTGGTAACAATGGTGGTGA+TGG 0.521724 1_4:-501724 Msa0141760:CDS
GAGGGAGATGTTGATGGCAC+AGG 0.521926 1_4:-500972 Msa0141760:CDS
TTGTCAACTGTAGGAAAGGA+TGG 0.523925 1_4:-500167 Msa0141760:CDS
CATTAGAGTTCTGTAGTGCC+TGG 0.524573 1_4:-497257 Msa0141760:intron
TTTAGAGGAAGAAGTGATTG+TGG 0.524820 1_4:+502270 None:intergenic
GATCTTCCACCGACAAGAAA+GGG 0.524841 1_4:+501474 None:intergenic
ACCAAAGTGATGCAGGTGAC+GGG 0.525452 1_4:+501690 None:intergenic
TCCAGAATTTCTTGAAGACC+AGG 0.526116 1_4:-500590 Msa0141760:CDS
GTAACTAACCCAGCATATAG+AGG 0.527504 1_4:+501628 None:intergenic
GACTACCTCTAGGACGGCTA+TGG 0.527753 1_4:+497379 None:intergenic
CTTTGGATCAAATCATCAAA+GGG 0.528514 1_4:+501086 None:intergenic
AATTGGTAATGTTGTTGTAT+GGG 0.528760 1_4:+502481 None:intergenic
ACAAACTATGAAAGTCAAAA+GGG 0.530669 1_4:-499227 Msa0141760:CDS
TCGTGAAGAACATGCCTACC+AGG 0.532256 1_4:+497239 None:intergenic
AACCAAAGTGATGCAGGTGA+CGG 0.533269 1_4:+501689 None:intergenic
GCTATGGAAGGTTGAGCGGT+TGG 0.534952 1_4:-496335 Msa0141760:CDS
GTTCTTACTATATGTGGTCC+TGG 0.535808 1_4:-501742 Msa0141760:CDS
CCATCACCACCATTGTTACC+AGG 0.540694 1_4:+501724 None:intergenic
TGAGATTGATGAAACTCTCA+TGG 0.542247 1_4:-502191 Msa0141760:CDS
AGTCGTGTTCTTACTATATG+TGG 0.545920 1_4:-501748 Msa0141760:CDS
GGCCTTGTCAACTGTAGGAA+AGG 0.550230 1_4:-500171 Msa0141760:CDS
CTTTCCAATTCGGACACACA+TGG 0.551115 1_4:+500657 None:intergenic
AATGCGTTGCATTATTCCAA+TGG 0.551836 1_4:+496196 None:intergenic
TGCGTTGGCTGCGAGTTTGA+AGG 0.554483 1_4:-500207 Msa0141760:CDS
TGGAGCAATAGTCAGCAAGC+AGG 0.559556 1_4:-497352 Msa0141760:intron
CTCATCACACTGAATTATCA+GGG 0.561810 1_4:+496310 None:intergenic
CGGATAAGAAAAGGCCAACA+AGG 0.562450 1_4:-502635 Msa0141760:five_prime_UTR
ATCCTTTCCTACAGTTGACA+AGG 0.563043 1_4:+500169 None:intergenic
AGAGCTGAAATATCGATTTG+AGG 0.565098 1_4:+500631 None:intergenic
CAATGGTGGTGATGGTCTGG+TGG 0.565708 1_4:-501716 Msa0141760:CDS
GAGAAGAATTGAAGAAAGGG+AGG 0.568457 1_4:+502405 None:intergenic
TGAATCAACAAACCATGAGT+TGG 0.572983 1_4:+502146 None:intergenic
TCACGAGCAGTACAAAGAGC+TGG 0.573144 1_4:-497222 Msa0141760:CDS
CGCTTTGGGTAACAGACCAA+AGG 0.576679 1_4:+501661 None:intergenic
AGAGTTCTGTAGTGCCTGGT+AGG 0.578343 1_4:-497253 Msa0141760:CDS
ATTGGTAATGTTGTTGTATG+GGG 0.580281 1_4:+502482 None:intergenic
GTGTGATGAGTTTACCCCAC+CGG 0.580702 1_4:-496297 Msa0141760:three_prime_UTR
TTTGAAGGAACCAAATGCTA+TGG 0.581375 1_4:-500192 Msa0141760:CDS
TCTTTGGATCAAATCATCAA+AGG 0.584306 1_4:+501085 None:intergenic
CAACTGGCTGCAGCTCATCA+CGG 0.584760 1_4:-499391 Msa0141760:intron
AGAACACGACTATACTCGTC+CGG 0.588531 1_4:+501760 None:intergenic
ATTTCTTGAAGACCAGGTGG+AGG 0.597398 1_4:-500584 Msa0141760:CDS
TAAATGGTTTGATGATGCGT+TGG 0.600021 1_4:-500222 Msa0141760:CDS
GCTCCAATCTGACTACCTCT+AGG 0.601768 1_4:+497369 None:intergenic
AAGTCCTTGGAGAAATCTGA+TGG 0.606006 1_4:+501449 None:intergenic
TCTGGGTGGCATGTTGAAGA+GGG 0.609291 1_4:-500990 Msa0141760:CDS
TGTTCAGAAAGTTTCTGATG+AGG 0.615330 1_4:-497418 Msa0141760:CDS
ATGGATGTTCCAGGATATGG+TGG 0.617263 1_4:+500676 None:intergenic
TCTTCAACATGCCACCCAGA+AGG 0.618781 1_4:+500993 None:intergenic
ACCCAGCATATAGAGGCTTG+GGG 0.628100 1_4:+501635 None:intergenic
GCTATGGCCTTGTCAACTGT+AGG 0.630441 1_4:-500176 Msa0141760:CDS
GTCGGAATCGAAATTGGACA+TGG 0.635523 1_4:+502246 None:intergenic
GCTGAAATATCGATTTGAGG+AGG 0.636380 1_4:+500634 None:intergenic
CAATCTGACTACCTCTAGGA+CGG 0.639748 1_4:+497373 None:intergenic
TTTGAGGTAAGTGACTGAGT+CGG 0.651593 1_4:+502228 None:intergenic
AAAAGCTATGGAAGGTTGAG+CGG 0.651670 1_4:-496339 Msa0141760:CDS
ATTGCTAAAAGGCTTTGACA+AGG 0.653672 1_4:-499363 Msa0141760:CDS
TTGACAAGGATGGATTTGTG+TGG 0.659196 1_4:-499349 Msa0141760:intron
CTGGTAGTAAAATTGAAGTG+TGG 0.660046 1_4:-502593 Msa0141760:five_prime_UTR
GCTTAGAAATGGTGAGTATG+CGG 0.660258 1_4:-496088 Msa0141760:three_prime_UTR
TCTACCATCAGATTTCTCCA+AGG 0.661275 1_4:-501453 Msa0141760:CDS
AGAATTTCTTGAAGACCAGG+TGG 0.663417 1_4:-500587 Msa0141760:CDS
CCCAGCATATAGAGGCTTGG+GGG 0.666571 1_4:+501636 None:intergenic
CTGTAGATATTCCTTCTGGG+TGG 0.670404 1_4:-501004 Msa0141760:CDS
ATGAAATGAGAATCCAAACA+TGG 0.678723 1_4:+501409 None:intergenic
ATATGTGGTCCTGGTAACAA+TGG 0.681572 1_4:-501733 Msa0141760:CDS
TGGATCAAATCATCAAAGGG+AGG 0.684546 1_4:+501089 None:intergenic
TGGTCGACGCTGAAGCCAAG+AGG 0.686919 1_4:+502166 None:intergenic
TATTTCCATAGCCGTCCTAG+AGG 0.687448 1_4:-497384 Msa0141760:CDS
GAGATTGATGAAACTCTCAT+GGG 0.695408 1_4:-502190 Msa0141760:CDS
TGAACATTACCTGATTAATG+GGG 0.704539 1_4:+500557 None:intergenic
TGTGGTCCTGGTAACAATGG+TGG 0.732229 1_4:-501730 Msa0141760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATTTGTTTATTTAAACAT+TGG - chr1_4:497875-497894 Msa0141760:intron 10.0%
!!! TTTTATTAAAAAAGAAGTTT+CGG - chr1_4:500254-500273 Msa0141760:intron 10.0%
!!! AATCTTAATATTTTTAATAG+AGG + chr1_4:500326-500345 None:intergenic 10.0%
!! TCTATTAAAAATATTAAGAT+TGG - chr1_4:500325-500344 Msa0141760:intron 10.0%
!!! AAAAAACAATTTTATGTATT+CGG + chr1_4:500443-500462 None:intergenic 10.0%
!!! AATCAACTAAATATTTTTTT+TGG + chr1_4:501142-501161 None:intergenic 10.0%
!!! TGATTATTTAAAACTTTTTT+TGG - chr1_4:502233-502252 Msa0141760:CDS 10.0%
!!! TTTAAAATTGTTAAGAAAGT+TGG - chr1_4:496105-496124 Msa0141760:three_prime_UTR 15.0%
!! TTAAAATTGTTAAGAAAGTT+GGG - chr1_4:496106-496125 Msa0141760:three_prime_UTR 15.0%
!! TAGAGAAATAATAATAATTG+TGG + chr1_4:496340-496359 None:intergenic 15.0%
!! TCATGATTGAATTATATTAA+CGG + chr1_4:496958-496977 None:intergenic 15.0%
!! AAAGAAAAGAAAGAAAAAAA+TGG + chr1_4:497218-497237 None:intergenic 15.0%
!! CAATTATAAAATAACTAATC+AGG + chr1_4:498764-498783 None:intergenic 15.0%
!!! CTGATTAGTTATTTTATAAT+TGG - chr1_4:498762-498781 Msa0141760:intron 15.0%
!! ATTTAATGTTAGAATTTCTT+TGG - chr1_4:499466-499485 Msa0141760:intron 15.0%
!! AGTTGCAAATAATAATAATA+TGG + chr1_4:501028-501047 None:intergenic 15.0%
!!! TTTATTGCTTTTTTTTTTCT+AGG - chr1_4:501319-501338 Msa0141760:intron 15.0%
!!! ATGACAATTTTTACTTTAAA+AGG - chr1_4:502073-502092 Msa0141760:intron 15.0%
!!! AAAAGTTTTAAATAATCATG+AGG + chr1_4:502231-502250 None:intergenic 15.0%
!!! AACTGAATTGATTTAATTAG+AGG + chr1_4:496423-496442 None:intergenic 20.0%
!!! TTAATATTTAGTTTCGTTTC+AGG - chr1_4:496447-496466 Msa0141760:intron 20.0%
!!! TAATATTTAGTTTCGTTTCA+GGG - chr1_4:496448-496467 Msa0141760:intron 20.0%
!! AAGTAAGATAAAAATGAGAA+AGG + chr1_4:496674-496693 None:intergenic 20.0%
!! AAAACTAACAAACAAAGTAT+CGG + chr1_4:496835-496854 None:intergenic 20.0%
!!! TATAAAAATGGATTTGGATT+TGG + chr1_4:497503-497522 None:intergenic 20.0%
!! TACGAAAAGAAATAAATCTT+TGG + chr1_4:497710-497729 None:intergenic 20.0%
!! CGTAATAATCATAATCAAAT+TGG - chr1_4:497726-497745 Msa0141760:intron 20.0%
!! TAGTCATGTAAAGAAATTAT+AGG - chr1_4:498845-498864 Msa0141760:intron 20.0%
!! AGTCATGTAAAGAAATTATA+GGG - chr1_4:498846-498865 Msa0141760:intron 20.0%
!!! ATATGGCTTTTAAAATATTC+TGG + chr1_4:498980-498999 None:intergenic 20.0%
!!! TGTTTTTATTAGTTGTATGA+TGG - chr1_4:499071-499090 Msa0141760:intron 20.0%
!!! GTTTTTATTAGTTGTATGAT+GGG - chr1_4:499072-499091 Msa0141760:intron 20.0%
!! ATGCATATATTTAATTACAC+AGG + chr1_4:499141-499160 None:intergenic 20.0%
!! AATATTACACATATTATGGT+GGG + chr1_4:499340-499359 None:intergenic 20.0%
!! ATTTCTTTGGCAATATTATT+AGG - chr1_4:499479-499498 Msa0141760:intron 20.0%
!!! ATGCATCAATTCTTTTTTAT+TGG - chr1_4:499595-499614 Msa0141760:intron 20.0%
!!! TGCATCAATTCTTTTTTATT+GGG - chr1_4:499596-499615 Msa0141760:intron 20.0%
!! AATATGTCTTTCTATGTATT+AGG + chr1_4:500212-500231 None:intergenic 20.0%
!!! TATTTTTAATAGAGGTGATA+AGG + chr1_4:500318-500337 None:intergenic 20.0%
!!! TGCAATTTTTATTTAATCTG+TGG - chr1_4:500517-500536 Msa0141760:intron 20.0%
!! GAAATAAAAGATACTACATA+AGG + chr1_4:500633-500652 None:intergenic 20.0%
!! AAACTTTCAATTTCTTAAAG+TGG - chr1_4:500692-500711 Msa0141760:CDS 20.0%
!! GCAAATAATAATAATATGGA+TGG + chr1_4:501024-501043 None:intergenic 20.0%
!! ATTAGTATTACTTCCTAAAA+AGG - chr1_4:501086-501105 Msa0141760:CDS 20.0%
!! TGTTTAATTAACTGAATATG+CGG + chr1_4:502119-502138 None:intergenic 20.0%
!! AGTTAATTAAACAAGTAGAA+GGG - chr1_4:502126-502145 Msa0141760:intron 20.0%
!!! TTTTAAATAATCATGAGGTA+AGG + chr1_4:502226-502245 None:intergenic 20.0%
!!! ATATCAATCAGAAATTTTCA+AGG + chr1_4:502363-502382 None:intergenic 20.0%
!! TCATTGATGGTACATTTATA+TGG - chr1_4:496242-496261 Msa0141760:three_prime_UTR 25.0%
!!! AATTGGTAATGTTGTTGTAT+GGG + chr1_4:496298-496317 None:intergenic 25.0%
! TAGTAAGAGAGAAATAGTTA+CGG + chr1_4:496396-496415 None:intergenic 25.0%
! AAGATAAAAATGAGAAAGGT+TGG + chr1_4:496670-496689 None:intergenic 25.0%
!!! AGAAAAAAGTACCTCATATA+TGG + chr1_4:496755-496774 None:intergenic 25.0%
!!! GATACTTTGTTTGTTAGTTT+TGG - chr1_4:496834-496853 Msa0141760:intron 25.0%
! AATTATATTAACGGCCTATT+TGG + chr1_4:496949-496968 None:intergenic 25.0%
! AATCATGAAAGTTTCTTGAA+TGG - chr1_4:496970-496989 Msa0141760:CDS 25.0%
!! TTGAATGGTTTTTCTTTTAC+AGG - chr1_4:496985-497004 Msa0141760:CDS 25.0%
! AAAGAAAGAAAAAAATGGCA+AGG + chr1_4:497213-497232 None:intergenic 25.0%
! GAGAATGAAATAGATATACA+AGG + chr1_4:497427-497446 None:intergenic 25.0%
!! CCAAAGTATAAAAATGGATT+TGG + chr1_4:497509-497528 None:intergenic 25.0%
!!! CCAAATCCATTTTTATACTT+TGG - chr1_4:497506-497525 Msa0141760:intron 25.0%
! CAAACTCCAAAGTATAAAAA+TGG + chr1_4:497515-497534 None:intergenic 25.0%
!!! CATTTTTATACTTTGGAGTT+TGG - chr1_4:497513-497532 Msa0141760:intron 25.0%
!!! TTGTTATTTTCTAATTGTCC+AGG - chr1_4:497654-497673 Msa0141760:intron 25.0%
! ATAGTTGAACGAAATATCTT+AGG + chr1_4:497917-497936 None:intergenic 25.0%
! CAAAGAGATCTACAAAAATT+CGG + chr1_4:497978-497997 None:intergenic 25.0%
! ATGAACATTACCTGATTAAT+GGG + chr1_4:498223-498242 None:intergenic 25.0%
!!! TCAAGTATTTTTGAGTACTA+TGG - chr1_4:498471-498490 Msa0141760:intron 25.0%
!!! TTTGAGTACTATGGTTTTAA+CGG - chr1_4:498480-498499 Msa0141760:intron 25.0%
! GGTATTTAACAAAATAACAG+AGG + chr1_4:498651-498670 None:intergenic 25.0%
! GTCATGTAAAGAAATTATAG+GGG - chr1_4:498847-498866 Msa0141760:intron 25.0%
! ATATGCATTTAGAGAAATTG+TGG - chr1_4:499153-499172 Msa0141760:intron 25.0%
! TATGCATTTAGAGAAATTGT+GGG - chr1_4:499154-499173 Msa0141760:intron 25.0%
! TCGAATTCAATCACATAATT+AGG + chr1_4:499294-499313 None:intergenic 25.0%
! CAATATTACACATATTATGG+TGG + chr1_4:499341-499360 None:intergenic 25.0%
! CACCATAATATGTGTAATAT+TGG - chr1_4:499339-499358 Msa0141760:intron 25.0%
! GTCCAATATTACACATATTA+TGG + chr1_4:499344-499363 None:intergenic 25.0%
!! GAAGTACATTAATTTGGAAA+TGG + chr1_4:499366-499385 None:intergenic 25.0%
! ACAAACTATGAAAGTCAAAA+GGG - chr1_4:499549-499568 Msa0141760:intron 25.0%
! TAAAAAAGAATTGATGCATG+TGG + chr1_4:499594-499613 None:intergenic 25.0%
!!! TCAATTCTTTTTTATTGGGA+TGG - chr1_4:499600-499619 Msa0141760:intron 25.0%
! AACAAATCAATCTGAAGATA+TGG + chr1_4:499665-499684 None:intergenic 25.0%
! TTGTTTGTAAATAGATCAGT+TGG - chr1_4:499680-499699 Msa0141760:intron 25.0%
!!! CATGGTACTTGATATTTTAA+TGG + chr1_4:499933-499952 None:intergenic 25.0%
! TTAGAAATGAGGTTGTAAAT+AGG - chr1_4:500005-500024 Msa0141760:intron 25.0%
! TAAATAGGAGAATAGAATTG+AGG - chr1_4:500020-500039 Msa0141760:intron 25.0%
! AACAGAAAAATGAGAAGAAT+AGG + chr1_4:500153-500172 None:intergenic 25.0%
!! TTTTTCTTTCTCTTGTATTC+TGG - chr1_4:500179-500198 Msa0141760:CDS 25.0%
! ATACATAGAAAGACATATTC+TGG - chr1_4:500213-500232 Msa0141760:CDS 25.0%
!!! AAATATTAAGATTGGCCTTT+TGG - chr1_4:500333-500352 Msa0141760:intron 25.0%
!!! AATATTAAGATTGGCCTTTT+GGG - chr1_4:500334-500353 Msa0141760:intron 25.0%
!!! TTTTTATTTAATCTGTGGTG+AGG - chr1_4:500522-500541 Msa0141760:intron 25.0%
!!! TTTTATTTAATCTGTGGTGA+GGG - chr1_4:500523-500542 Msa0141760:intron 25.0%
! GTTAAGTGAAAATGTATAAC+TGG - chr1_4:500545-500564 Msa0141760:intron 25.0%
! AAGATACTACATAAGGATTA+AGG + chr1_4:500626-500645 None:intergenic 25.0%
!! ATTTTGCACAAAACCTTTTT+AGG + chr1_4:501102-501121 None:intergenic 25.0%
! AAAAGGTAGAATGAGATTAT+TGG + chr1_4:501707-501726 None:intergenic 25.0%
!! TTCTACCTTTTGTTAAATCA+AGG - chr1_4:501716-501735 Msa0141760:CDS 25.0%
!! CACCAAATCTTTTTGAATTT+TGG - chr1_4:501819-501838 Msa0141760:intron 25.0%
! TGCCAAAATTCAAAAAGATT+TGG + chr1_4:501824-501843 None:intergenic 25.0%
!!! AATCTTTTTGAATTTTGGCA+AGG - chr1_4:501824-501843 Msa0141760:intron 25.0%
! AACAAACAAGCTATCATAAA+CGG + chr1_4:501886-501905 None:intergenic 25.0%
! TTTAATTAACTGAATATGCG+GGG + chr1_4:502117-502136 None:intergenic 25.0%
! GTTTAATTAACTGAATATGC+GGG + chr1_4:502118-502137 None:intergenic 25.0%
! CAGTTAATTAAACAAGTAGA+AGG - chr1_4:502125-502144 Msa0141760:intron 25.0%
! GTTAATTAAACAAGTAGAAG+GGG - chr1_4:502127-502146 Msa0141760:intron 25.0%
! TTAATTAAACAAGTAGAAGG+GGG - chr1_4:502128-502147 Msa0141760:intron 25.0%
! AACATTAAGAAAGACTAATG+GGG + chr1_4:502200-502219 None:intergenic 25.0%
! CAACATTAAGAAAGACTAAT+GGG + chr1_4:502201-502220 None:intergenic 25.0%
!!! ATTTCAAATGTTCTAAGGAA+AGG + chr1_4:502285-502304 None:intergenic 25.0%
!! ACATTTGAAATCCTAGTTAA+TGG - chr1_4:502294-502313 Msa0141760:CDS 25.0%
!! AAGTTGGGTAAATTTGTTGA+CGG - chr1_4:496121-496140 Msa0141760:three_prime_UTR 30.0%
! ATTTGTTGACGGATAAGAAA+AGG - chr1_4:496132-496151 Msa0141760:three_prime_UTR 30.0%
!! ATTGGTAATGTTGTTGTATG+GGG + chr1_4:496297-496316 None:intergenic 30.0%
!! GAATTGGTAATGTTGTTGTA+TGG + chr1_4:496299-496318 None:intergenic 30.0%
! ATGAATGAGTGATAGTGAAT+TGG + chr1_4:496315-496334 None:intergenic 30.0%
GTAGAAAATGATCGAATTGT+AGG + chr1_4:496487-496506 None:intergenic 30.0%
! CTCTTTCCATTTTCAATTTC+AGG - chr1_4:496702-496721 Msa0141760:intron 30.0%
CCAATTCCTGAAATTGAAAA+TGG + chr1_4:496711-496730 None:intergenic 30.0%
! CCATTTTCAATTTCAGGAAT+TGG - chr1_4:496708-496727 Msa0141760:intron 30.0%
!!! GTTTGTTAGTTTTGGAGTAT+CGG - chr1_4:496842-496861 Msa0141760:intron 30.0%
!!! TTTGTTAGTTTTGGAGTATC+GGG - chr1_4:496843-496862 Msa0141760:intron 30.0%
TATAAGCAATTGTGAAAGTG+TGG + chr1_4:496901-496920 None:intergenic 30.0%
TCAAATGAGACTATCCAAAT+AGG - chr1_4:496932-496951 Msa0141760:CDS 30.0%
! TCTTTTACAGGTTTACAAAC+CGG - chr1_4:496997-497016 Msa0141760:CDS 30.0%
AAAAAATGGCAAGGTGATAT+AGG + chr1_4:497204-497223 None:intergenic 30.0%
! CTTTTCTTTTAATGAGTAGC+TGG - chr1_4:497229-497248 Msa0141760:CDS 30.0%
ATGAAATGAGAATCCAAACA+TGG + chr1_4:497370-497389 None:intergenic 30.0%
ATGTTTGGATTCTCATTTCA+TGG - chr1_4:497369-497388 Msa0141760:CDS 30.0%
CTATGTTCATAATTGTAACC+AGG + chr1_4:497465-497484 None:intergenic 30.0%
CTTTGGATCAAATCATCAAA+GGG + chr1_4:497693-497712 None:intergenic 30.0%
TCTTTGGATCAAATCATCAA+AGG + chr1_4:497694-497713 None:intergenic 30.0%
ATATCTACAGAGACTATAAC+CGG + chr1_4:497762-497781 None:intergenic 30.0%
AGGAATTAAACCTGATATGT+TGG - chr1_4:497824-497843 Msa0141760:intron 30.0%
CAAAAATTCGGTATATCAGT+GGG + chr1_4:497966-497985 None:intergenic 30.0%
ACAAAAATTCGGTATATCAG+TGG + chr1_4:497967-497986 None:intergenic 30.0%
! AACTTCTTTGCACAGAATTT+TGG + chr1_4:498007-498026 None:intergenic 30.0%
AAATTCTGTGCAAAGAAGTT+TGG - chr1_4:498007-498026 Msa0141760:intron 30.0%
! TTATACTTTTCAGCAATAGC+AGG + chr1_4:498070-498089 None:intergenic 30.0%
TGAACATTACCTGATTAATG+GGG + chr1_4:498222-498241 None:intergenic 30.0%
CATGAACATTACCTGATTAA+TGG + chr1_4:498224-498243 None:intergenic 30.0%
!!! TCAAGTATTTTTGAGTGCTA+TGG - chr1_4:498335-498354 Msa0141760:intron 30.0%
GTATAGTGATAGATCACTAT+TGG - chr1_4:498698-498717 Msa0141760:intron 30.0%
! GATCACTATTGGTGTATTTT+AGG - chr1_4:498709-498728 Msa0141760:intron 30.0%
!! AGATAGTTATGTTTTTGCTG+TGG - chr1_4:498790-498809 Msa0141760:intron 30.0%
GACACACAATTAGGAAAATA+TGG + chr1_4:498997-499016 None:intergenic 30.0%
GGTAGTTATTTGAGTGATTA+TGG - chr1_4:499109-499128 Msa0141760:intron 30.0%
ATGCATTTAGAGAAATTGTG+GGG - chr1_4:499155-499174 Msa0141760:intron 30.0%
!! AACAATGAAGGTTGATGTTA+GGG - chr1_4:499209-499228 Msa0141760:CDS 30.0%
CCAGTTGAAGTACATTAATT+TGG + chr1_4:499372-499391 None:intergenic 30.0%
CCAAATTAATGTACTTCAAC+TGG - chr1_4:499369-499388 Msa0141760:CDS 30.0%
CTGTACAAAACAATTACAGT+AGG + chr1_4:499525-499544 None:intergenic 30.0%
!! CTACTGTAATTGTTTTGTAC+AGG - chr1_4:499523-499542 Msa0141760:intron 30.0%
CACAAACTATGAAAGTCAAA+AGG - chr1_4:499548-499567 Msa0141760:intron 30.0%
! GGCATTAATTTTTCATGCAA+AGG - chr1_4:499701-499720 Msa0141760:intron 30.0%
! TATCCTAGGAAAGTACATTA+TGG + chr1_4:499768-499787 None:intergenic 30.0%
TTATCCTCGATTTATATCCT+AGG + chr1_4:499782-499801 None:intergenic 30.0%
! TTAGTGGTTAGTTAGAAATG+AGG - chr1_4:499994-500013 Msa0141760:intron 30.0%
GCTGTCAAATTTGAGAATTA+GGG - chr1_4:500050-500069 Msa0141760:intron 30.0%
TCAAATTTGAGAATTAGGGT+GGG - chr1_4:500054-500073 Msa0141760:intron 30.0%
AAAGACATATTCTGGTATTG+TGG - chr1_4:500221-500240 Msa0141760:CDS 30.0%
AAGACATATTCTGGTATTGT+GGG - chr1_4:500222-500241 Msa0141760:CDS 30.0%
! ATGACCTTTAACTTAATCCA+TGG - chr1_4:500288-500307 Msa0141760:intron 30.0%
! TGACCTTTAACTTAATCCAT+GGG - chr1_4:500289-500308 Msa0141760:intron 30.0%
ATCTTAGAAAAATGCCCAAA+AGG + chr1_4:500351-500370 None:intergenic 30.0%
!!! TTGGGCATTTTTCTAAGATT+CGG - chr1_4:500352-500371 Msa0141760:intron 30.0%
!!! CATTTTTCTAAGATTCGGTT+GGG - chr1_4:500357-500376 Msa0141760:intron 30.0%
!!! ATTTTTCTAAGATTCGGTTG+GGG - chr1_4:500358-500377 Msa0141760:intron 30.0%
ATGCAACGAAATAATAAACC+CGG - chr1_4:500596-500615 Msa0141760:CDS 30.0%
AACACACACTTTCTTCTATT+GGG + chr1_4:500757-500776 None:intergenic 30.0%
TAACACACACTTTCTTCTAT+TGG + chr1_4:500758-500777 None:intergenic 30.0%
!!! CATTTGCTGACTTGTTTTAT+TGG - chr1_4:500960-500979 Msa0141760:CDS 30.0%
!!! TTTTTTTTTCTAGGTACGTG+TGG - chr1_4:501328-501347 Msa0141760:intron 30.0%
TGGAACAAAAATATGCTGAT+GGG - chr1_4:501574-501593 Msa0141760:intron 30.0%
GCTTTCCTTGATTTAACAAA+AGG + chr1_4:501724-501743 None:intergenic 30.0%
TTCTGCAAGCAGAAAATATA+TGG + chr1_4:501757-501776 None:intergenic 30.0%
ACAAACAAGCTATCATAAAC+GGG + chr1_4:501885-501904 None:intergenic 30.0%
CATATATAGATCAACTTTGC+TGG + chr1_4:502025-502044 None:intergenic 30.0%
GCAACATTAAGAAAGACTAA+TGG + chr1_4:502202-502221 None:intergenic 30.0%
CTAGGATTTCAAATGTTCTA+AGG + chr1_4:502290-502309 None:intergenic 30.0%
TGAAATCCTAGTTAATGGAA+AGG - chr1_4:502299-502318 Msa0141760:CDS 30.0%
TATATGCATGTCTAATTGAC+AGG - chr1_4:502383-502402 Msa0141760:intron 30.0%
!!! TTTTTTCCATCTATCTCATG+GGG + chr1_4:502421-502440 None:intergenic 30.0%
!!! CTTTTTTCCATCTATCTCAT+GGG + chr1_4:502422-502441 None:intergenic 30.0%
AGATAGATGGAAAAAAGCTA+TGG - chr1_4:502425-502444 Msa0141760:CDS 30.0%
!! ATACAATTTTGACGTGTTTC+CGG + chr1_4:502501-502520 None:intergenic 30.0%
CTGGTAGTAAAATTGAAGTG+TGG - chr1_4:496183-496202 Msa0141760:three_prime_UTR 35.0%
ACGGAGAAGAATTGAAGAAA+GGG + chr1_4:496377-496396 None:intergenic 35.0%
TACGGAGAAGAATTGAAGAA+AGG + chr1_4:496378-496397 None:intergenic 35.0%
TTTAGAGGAAGAAGTGATTG+TGG + chr1_4:496509-496528 None:intergenic 35.0%
!!! GAAATTGGACATGGTTTTAG+AGG + chr1_4:496524-496543 None:intergenic 35.0%
TGAGATTGATGAAACTCTCA+TGG - chr1_4:496585-496604 Msa0141760:intron 35.0%
GAGATTGATGAAACTCTCAT+GGG - chr1_4:496586-496605 Msa0141760:intron 35.0%
TGAATCAACAAACCATGAGT+TGG + chr1_4:496633-496652 None:intergenic 35.0%
TTTCAATTTCAGGAATTGGC+TGG - chr1_4:496712-496731 Msa0141760:intron 35.0%
AGTCGTGTTCTTACTATATG+TGG - chr1_4:497028-497047 Msa0141760:intron 35.0%
TCACTTTGGTTATAAGCCTT+TGG - chr1_4:497099-497118 Msa0141760:intron 35.0%
TACTAGAATGTCAAAGTCCT+TGG + chr1_4:497343-497362 None:intergenic 35.0%
ATTCTAGTAGATGCCATGTT+TGG - chr1_4:497354-497373 Msa0141760:CDS 35.0%
GTAACCAGGATTCATAACAT+TGG + chr1_4:497451-497470 None:intergenic 35.0%
! GTTTTGTCTGTTATCAACAC+AGG - chr1_4:497568-497587 Msa0141760:intron 35.0%
TCAAATTGGCCAAAAAAGAC+CGG - chr1_4:497740-497759 Msa0141760:intron 35.0%
!!! AGACTATAACCGGTCTTTTT+TGG + chr1_4:497752-497771 None:intergenic 35.0%
TCTCTGTAGATATTCCTTCT+GGG - chr1_4:497769-497788 Msa0141760:intron 35.0%
TGGATATGTACCAACATATC+AGG + chr1_4:497837-497856 None:intergenic 35.0%
TGATATGTTGGTACATATCC+AGG - chr1_4:497836-497855 Msa0141760:intron 35.0%
GATATGTTGGTACATATCCA+GGG - chr1_4:497837-497856 Msa0141760:intron 35.0%
AATGAAACAGATATATGCCC+TGG + chr1_4:497857-497876 None:intergenic 35.0%
CAAATCTACCTCCTAAAAAG+TGG + chr1_4:498042-498061 None:intergenic 35.0%
!! AGAGCTGAAATATCGATTTG+AGG + chr1_4:498148-498167 None:intergenic 35.0%
CAAGTCATTAACTACCAACA+GGG + chr1_4:498289-498308 None:intergenic 35.0%
TCAAGTCATTAACTACCAAC+AGG + chr1_4:498290-498309 None:intergenic 35.0%
!!! TGAGTGCTATGGTTTTAATC+AGG - chr1_4:498346-498365 Msa0141760:intron 35.0%
CAAGTCATTATCTACCAACA+GGG + chr1_4:498425-498444 None:intergenic 35.0%
TCAAGTCATTATCTACCAAC+AGG + chr1_4:498426-498445 None:intergenic 35.0%
ACGCATCATCAAACCATTTA+CGG + chr1_4:498554-498573 None:intergenic 35.0%
!! TAAATGGTTTGATGATGCGT+TGG - chr1_4:498554-498573 Msa0141760:intron 35.0%
TTTGAAGGAACCAAATGCTA+TGG - chr1_4:498584-498603 Msa0141760:intron 35.0%
AATAACAGAGGCTGATCTTA+CGG + chr1_4:498639-498658 None:intergenic 35.0%
CTAGTGATCTTGAAGACAAA+AGG + chr1_4:498672-498691 None:intergenic 35.0%
! CTTTTGTCTTCAAGATCACT+AGG - chr1_4:498670-498689 Msa0141760:intron 35.0%
CAATAACAAACCAGATCACA+AGG + chr1_4:498931-498950 None:intergenic 35.0%
TAATTAGACCTTGCTAGACT+GGG + chr1_4:499049-499068 None:intergenic 35.0%
ATAATTAGACCTTGCTAGAC+TGG + chr1_4:499050-499069 None:intergenic 35.0%
!! TTGTATGATGGGCATGTATT+TGG - chr1_4:499083-499102 Msa0141760:intron 35.0%
TGCATTTAGAGAAATTGTGG+GGG - chr1_4:499156-499175 Msa0141760:intron 35.0%
!! GAACAATGAAGGTTGATGTT+AGG - chr1_4:499208-499227 Msa0141760:CDS 35.0%
!! ACAATGAAGGTTGATGTTAG+GGG - chr1_4:499210-499229 Msa0141760:CDS 35.0%
! ATTGCTAAAAGGCTTTGACA+AGG - chr1_4:499413-499432 Msa0141760:intron 35.0%
TGAAATCAATAGTCACCTGT+CGG + chr1_4:499632-499651 None:intergenic 35.0%
ATGCCATAATGTACTTTCCT+AGG - chr1_4:499762-499781 Msa0141760:intron 35.0%
CTTTCCTAGGATATAAATCG+AGG - chr1_4:499775-499794 Msa0141760:intron 35.0%
GAAGAGAATGTTCAAGATTG+TGG - chr1_4:499829-499848 Msa0141760:intron 35.0%
TTCTCTCAGATGATGTAACT+TGG - chr1_4:499861-499880 Msa0141760:intron 35.0%
TCTCTCAGATGATGTAACTT+GGG - chr1_4:499862-499881 Msa0141760:intron 35.0%
AGATGATGTAACTTGGGATT+TGG - chr1_4:499868-499887 Msa0141760:intron 35.0%
GCATTCTTGTATCACTTGTT+TGG + chr1_4:499968-499987 None:intergenic 35.0%
TAGGAGAATAGAATTGAGGT+AGG - chr1_4:500024-500043 Msa0141760:intron 35.0%
AGGAGAATAGAATTGAGGTA+GGG - chr1_4:500025-500044 Msa0141760:intron 35.0%
GGCTGTCAAATTTGAGAATT+AGG - chr1_4:500049-500068 Msa0141760:intron 35.0%
GTCAAATTTGAGAATTAGGG+TGG - chr1_4:500053-500072 Msa0141760:intron 35.0%
TGATAAAATACCACACACCT+AGG + chr1_4:500102-500121 None:intergenic 35.0%
GTCTTTCTATGTATTAGGAC+TGG + chr1_4:500207-500226 None:intergenic 35.0%
! GACCTTTAACTTAATCCATG+GGG - chr1_4:500290-500309 Msa0141760:intron 35.0%
! TTCCCCATGGATTAAGTTAA+AGG + chr1_4:500295-500314 None:intergenic 35.0%
!!! GCATTTTTCTAAGATTCGGT+TGG - chr1_4:500356-500375 Msa0141760:intron 35.0%
ACATAAGGATTAAGGTCAAC+CGG + chr1_4:500618-500637 None:intergenic 35.0%
TCTTAAAGTGGAATAGAGCT+TGG - chr1_4:500704-500723 Msa0141760:CDS 35.0%
ACACTTTCTTCTATTGGGTA+TGG + chr1_4:500752-500771 None:intergenic 35.0%
AGCTAGATGACCTATATCTT+AGG - chr1_4:500851-500870 Msa0141760:intron 35.0%
ACATGCACTTGATTTCATCT+TGG + chr1_4:500898-500917 None:intergenic 35.0%
!!! TATGTCACTTTGCTTTTCAG+AGG - chr1_4:501226-501245 Msa0141760:intron 35.0%
GTGAATCAACACTAAATTGC+TGG + chr1_4:501297-501316 None:intergenic 35.0%
TGTTCAGAAAGTTTCTGATG+AGG - chr1_4:501358-501377 Msa0141760:intron 35.0%
CTGGAACAAAAATATGCTGA+TGG - chr1_4:501573-501592 Msa0141760:intron 35.0%
! TGATTAGCTCTTGTTGCATT+TGG - chr1_4:501681-501700 Msa0141760:CDS 35.0%
TGATCCCTAAACCTAAAAAC+TGG - chr1_4:501780-501799 Msa0141760:intron 35.0%
GATCCCTAAACCTAAAAACT+GGG - chr1_4:501781-501800 Msa0141760:intron 35.0%
ATCCCTAAACCTAAAAACTG+GGG - chr1_4:501782-501801 Msa0141760:intron 35.0%
AAACAAGCTATCATAAACGG+GGG + chr1_4:501883-501902 None:intergenic 35.0%
CAAACAAGCTATCATAAACG+GGG + chr1_4:501884-501903 None:intergenic 35.0%
! CATTTTTCGCTACACAGTTT+AGG - chr1_4:501979-501998 Msa0141760:intron 35.0%
GTTACTCCTTTCCATTAACT+AGG + chr1_4:502308-502327 None:intergenic 35.0%
AAGGAAAATTTACCTCACAC+GGG + chr1_4:502344-502363 None:intergenic 35.0%
CAAGGAAAATTTACCTCACA+CGG + chr1_4:502345-502364 None:intergenic 35.0%
!!! GCTTTTTTCCATCTATCTCA+TGG + chr1_4:502423-502442 None:intergenic 35.0%
AGATGGAAAAAAGCTATGGA+AGG - chr1_4:502429-502448 Msa0141760:CDS 35.0%
CTCATCACACTGAATTATCA+GGG + chr1_4:502469-502488 None:intergenic 35.0%
ACTCATCACACTGAATTATC+AGG + chr1_4:502470-502489 None:intergenic 35.0%
AATGCGTTGCATTATTCCAA+TGG + chr1_4:502583-502602 None:intergenic 35.0%
TGAAGAGATGCGTTCATTGA+TGG - chr1_4:496229-496248 Msa0141760:three_prime_UTR 40.0%
GAGAAGAATTGAAGAAAGGG+AGG + chr1_4:496374-496393 None:intergenic 40.0%
! TTTGAGGTAAGTGACTGAGT+CGG + chr1_4:496551-496570 None:intergenic 40.0%
!! CAACAGCTTCTTGTTGTTTG+AGG + chr1_4:496567-496586 None:intergenic 40.0%
!! ACACGTATCACGGAAGTATT+TGG + chr1_4:496800-496819 None:intergenic 40.0%
!! AGTATCGGGCTTTTTAGAGA+TGG - chr1_4:496857-496876 Msa0141760:intron 40.0%
GTTCTTACTATATGTGGTCC+TGG - chr1_4:497034-497053 Msa0141760:intron 40.0%
ATATGTGGTCCTGGTAACAA+TGG - chr1_4:497043-497062 Msa0141760:intron 40.0%
GCTTATAACCAAAGTGATGC+AGG + chr1_4:497096-497115 None:intergenic 40.0%
GTAACTAACCCAGCATATAG+AGG + chr1_4:497151-497170 None:intergenic 40.0%
!! ATATGCTGGGTTAGTTACTC+AGG - chr1_4:497153-497172 Msa0141760:intron 40.0%
ATTGTCGATCCCTTTCTTGT+CGG - chr1_4:497293-497312 Msa0141760:intron 40.0%
TCTACCATCAGATTTCTCCA+AGG - chr1_4:497323-497342 Msa0141760:intron 40.0%
AAGTCCTTGGAGAAATCTGA+TGG + chr1_4:497330-497349 None:intergenic 40.0%
CTCACCAATGTTATGAATCC+TGG - chr1_4:497444-497463 Msa0141760:intron 40.0%
TGGATCAAATCATCAAAGGG+AGG + chr1_4:497690-497709 None:intergenic 40.0%
GTCTCTGTAGATATTCCTTC+TGG - chr1_4:497768-497787 Msa0141760:intron 40.0%
TTCTGTGCAAAGAAGTTTGG+CGG - chr1_4:498010-498029 Msa0141760:intron 40.0%
TACCTCCTAAAAAGTGGTGA+GGG + chr1_4:498036-498055 None:intergenic 40.0%
! ACTTTTCAGCAATAGCAGGT+GGG + chr1_4:498066-498085 None:intergenic 40.0%
! TACTTTTCAGCAATAGCAGG+TGG + chr1_4:498067-498086 None:intergenic 40.0%
CTTATACTTCCACCATATCC+TGG - chr1_4:498091-498110 Msa0141760:intron 40.0%
TTTGAGGAGGCTTTCCAATT+CGG + chr1_4:498132-498151 None:intergenic 40.0%
!! GCTGAAATATCGATTTGAGG+AGG + chr1_4:498145-498164 None:intergenic 40.0%
TCCAGAATTTCTTGAAGACC+AGG - chr1_4:498186-498205 Msa0141760:intron 40.0%
! ACCTGGTCTTCAAGAAATTC+TGG + chr1_4:498190-498209 None:intergenic 40.0%
AGAATTTCTTGAAGACCAGG+TGG - chr1_4:498189-498208 Msa0141760:intron 40.0%
ATTAACTACCAACAGGGAAG+AGG + chr1_4:498283-498302 None:intergenic 40.0%
ATTATCTACCAACAGGGAAG+AGG + chr1_4:498419-498438 None:intergenic 40.0%
TCAAACCATTTACGGAACTG+CGG + chr1_4:498546-498565 None:intergenic 40.0%
ATCCTTTCCTACAGTTGACA+AGG + chr1_4:498610-498629 None:intergenic 40.0%
TTGTCAACTGTAGGAAAGGA+TGG - chr1_4:498609-498628 Msa0141760:intron 40.0%
CTAATCAGGTCTACTAGACT+AGG + chr1_4:498750-498769 None:intergenic 40.0%
GTTTGTGTAGTCTTTGAACG+AGG - chr1_4:498885-498904 Msa0141760:intron 40.0%
AATAGCGCAGACACACAATT+AGG + chr1_4:499006-499025 None:intergenic 40.0%
TAATTGTGTGTCTGCGCTAT+TGG - chr1_4:499005-499024 Msa0141760:intron 40.0%
GTGCTGTGTTTGAACAATGA+AGG - chr1_4:499197-499216 Msa0141760:CDS 40.0%
CAATAATACACCAGCACACA+GGG + chr1_4:499240-499259 None:intergenic 40.0%
ACAATAATACACCAGCACAC+AGG + chr1_4:499241-499260 None:intergenic 40.0%
TCACGGATCGTATTGCTAAA+AGG - chr1_4:499402-499421 Msa0141760:intron 40.0%
! CTAAAAGGCTTTGACAAGGA+TGG - chr1_4:499417-499436 Msa0141760:intron 40.0%
! TTGACAAGGATGGATTTGTG+TGG - chr1_4:499427-499446 Msa0141760:intron 40.0%
TCTTGTATCACTTGTTTGGC+TGG + chr1_4:499964-499983 None:intergenic 40.0%
ACAAGAATGCTCTCTGTTAG+TGG - chr1_4:499978-499997 Msa0141760:intron 40.0%
AGAATAGAATTGAGGTAGGG+CGG - chr1_4:500028-500047 Msa0141760:intron 40.0%
AATTTGAGAATTAGGGTGGG+AGG - chr1_4:500057-500076 Msa0141760:intron 40.0%
GTTACCAAATCAAGACCTTC+AGG + chr1_4:500385-500404 None:intergenic 40.0%
CATAAGGATTAAGGTCAACC+GGG + chr1_4:500617-500636 None:intergenic 40.0%
GACCTATATCTTAGGACAAC+TGG - chr1_4:500859-500878 Msa0141760:intron 40.0%
TGCCAGTTGTCCTAAGATAT+AGG + chr1_4:500864-500883 None:intergenic 40.0%
TTATTGTGACCTCACAAAGC+TGG - chr1_4:501163-501182 Msa0141760:intron 40.0%
! TTACATTAGCCAGCTTTGTG+AGG + chr1_4:501175-501194 None:intergenic 40.0%
!!! TTTTTTCTAGGTACGTGTGG+AGG - chr1_4:501331-501350 Msa0141760:intron 40.0%
! TTTTTCTAGGTACGTGTGGA+GGG - chr1_4:501332-501351 Msa0141760:intron 40.0%
!!! CTCCCCAGTTTTTAGGTTTA+GGG + chr1_4:501787-501806 None:intergenic 40.0%
GTTGTCATACACACACAGTT+TGG + chr1_4:501940-501959 None:intergenic 40.0%
GTGTGTGTATGACAACTTAC+AGG - chr1_4:501944-501963 Msa0141760:intron 40.0%
!!! AGTCTGACAGGGAACTTTTT+TGG + chr1_4:502159-502178 None:intergenic 40.0%
GATGTAGCAAAAGTCTGACA+GGG + chr1_4:502170-502189 None:intergenic 40.0%
AGATGTAGCAAAAGTCTGAC+AGG + chr1_4:502171-502190 None:intergenic 40.0%
TCACACGGGTAAACAACAAA+AGG + chr1_4:502330-502349 None:intergenic 40.0%
!!! TTTTGTTGTTTACCCGTGTG+AGG - chr1_4:502329-502348 Msa0141760:intron 40.0%
AAAAGCTATGGAAGGTTGAG+CGG - chr1_4:502437-502456 Msa0141760:CDS 40.0%
!! AATTTTGACGTGTTTCCGGT+GGG + chr1_4:502497-502516 None:intergenic 40.0%
GATTGAGATTGCAGTTCCAT+TGG - chr1_4:502564-502583 Msa0141760:five_prime_UTR 40.0%
GACCTGATTCTGCTTAGAAA+TGG - chr1_4:502677-502696 Msa0141760:five_prime_UTR 40.0%
CACCATTTCTAAGCAGAATC+AGG + chr1_4:502682-502701 None:intergenic 40.0%
GCTTAGAAATGGTGAGTATG+CGG - chr1_4:502688-502707 Msa0141760:five_prime_UTR 40.0%
CGGATAAGAAAAGGCCAACA+AGG - chr1_4:496141-496160 Msa0141760:three_prime_UTR 45.0%
CGTGTTCTTGATTGCCTTGT+TGG + chr1_4:496158-496177 None:intergenic 45.0%
CAATCAAGAACACGCGATTC+TGG - chr1_4:496164-496183 Msa0141760:three_prime_UTR 45.0%
! CGTTTCAGGGTATTCTTCTC+AGG - chr1_4:496461-496480 Msa0141760:intron 45.0%
GTCGGAATCGAAATTGGACA+TGG + chr1_4:496533-496552 None:intergenic 45.0%
GACTGAGTCGGAATCGAAAT+TGG + chr1_4:496539-496558 None:intergenic 45.0%
CGTCGCTACTTCCATATATG+AGG - chr1_4:496741-496760 Msa0141760:intron 45.0%
TGTGACACTGACACGTATCA+CGG + chr1_4:496810-496829 None:intergenic 45.0%
AGAACACGACTATACTCGTC+CGG + chr1_4:497019-497038 None:intergenic 45.0%
!! TAACAATGGTGGTGATGGTC+TGG - chr1_4:497057-497076 Msa0141760:intron 45.0%
AACCAAAGTGATGCAGGTGA+CGG + chr1_4:497090-497109 None:intergenic 45.0%
AACCCAGCATATAGAGGCTT+GGG + chr1_4:497145-497164 None:intergenic 45.0%
TAACCCAGCATATAGAGGCT+TGG + chr1_4:497146-497165 None:intergenic 45.0%
GATCTTCCACCGACAAGAAA+GGG + chr1_4:497305-497324 None:intergenic 45.0%
AGATCTTCCACCGACAAGAA+AGG + chr1_4:497306-497325 None:intergenic 45.0%
CTAATTGTCCAGGTTCTCCA+AGG - chr1_4:497664-497683 Msa0141760:intron 45.0%
AAATCATCAAAGGGAGGCCT+TGG + chr1_4:497684-497703 None:intergenic 45.0%
CTGTAGATATTCCTTCTGGG+TGG - chr1_4:497772-497791 Msa0141760:intron 45.0%
GTTGAAGAGGGAGATGTTGA+TGG - chr1_4:497798-497817 Msa0141760:intron 45.0%
!! CTTTGCACAGAATTTTGGCG+CGG + chr1_4:498002-498021 None:intergenic 45.0%
CTACCTCCTAAAAAGTGGTG+AGG + chr1_4:498037-498056 None:intergenic 45.0%
ATGGATGTTCCAGGATATGG+TGG + chr1_4:498103-498122 None:intergenic 45.0%
CACATGGATGTTCCAGGATA+TGG + chr1_4:498106-498125 None:intergenic 45.0%
ACATCCATGTGTGTCCGAAT+TGG - chr1_4:498115-498134 Msa0141760:intron 45.0%
CTTTCCAATTCGGACACACA+TGG + chr1_4:498122-498141 None:intergenic 45.0%
ATTTCTTGAAGACCAGGTGG+AGG - chr1_4:498192-498211 Msa0141760:intron 45.0%
ATTACCCGCAGTTCCGTAAA+TGG - chr1_4:498538-498557 Msa0141760:intron 45.0%
CAAACCATTTACGGAACTGC+GGG + chr1_4:498545-498564 None:intergenic 45.0%
GTTGACAAGGCCATAGCATT+TGG + chr1_4:498597-498616 None:intergenic 45.0%
TGAACGAGGAAACTCCTTGT+AGG - chr1_4:498899-498918 Msa0141760:intron 45.0%
GAACGAGGAAACTCCTTGTA+GGG - chr1_4:498900-498919 Msa0141760:intron 45.0%
AACGAGGAAACTCCTTGTAG+GGG - chr1_4:498901-498920 Msa0141760:intron 45.0%
TAGTTGTACCCAGTCTAGCA+AGG - chr1_4:499038-499057 Msa0141760:intron 45.0%
! TGATGGGCATGTATTTGGTG+CGG - chr1_4:499088-499107 Msa0141760:intron 45.0%
TTGGGATGGTTTAAACCGAC+AGG - chr1_4:499614-499633 Msa0141760:intron 45.0%
!! AGGAGTATTGTGTCTTCTCC+AGG - chr1_4:499721-499740 Msa0141760:intron 45.0%
!! GGAGTATTGTGTCTTCTCCA+GGG - chr1_4:499722-499741 Msa0141760:intron 45.0%
GTTTGGCTGGACATATCTCA+TGG + chr1_4:499951-499970 None:intergenic 45.0%
CCACACACCTAGGTAATTCA+AGG + chr1_4:500092-500111 None:intergenic 45.0%
CCTTGAATTACCTAGGTGTG+TGG - chr1_4:500089-500108 Msa0141760:intron 45.0%
! TTTTCTAGGTACGTGTGGAG+GGG - chr1_4:501333-501352 Msa0141760:intron 45.0%
TATTTCCATAGCCGTCCTAG+AGG - chr1_4:501392-501411 Msa0141760:intron 45.0%
! CAATCTGACTACCTCTAGGA+CGG + chr1_4:501406-501425 None:intergenic 45.0%
CATTAGAGTTCTGTAGTGCC+TGG - chr1_4:501519-501538 Msa0141760:intron 45.0%
TCTTCTTCTGTTACTCCCCT+TGG - chr1_4:501641-501660 Msa0141760:CDS 45.0%
TAATCAGATGTCCGAAGTCC+AGG + chr1_4:501667-501686 None:intergenic 45.0%
!!! CCTCCCCAGTTTTTAGGTTT+AGG + chr1_4:501788-501807 None:intergenic 45.0%
CCTAAACCTAAAAACTGGGG+AGG - chr1_4:501785-501804 Msa0141760:intron 45.0%
! CTGTATCCTCCCCAGTTTTT+AGG + chr1_4:501794-501813 None:intergenic 45.0%
CTAAAAACTGGGGAGGATAC+AGG - chr1_4:501792-501811 Msa0141760:intron 45.0%
AGAAATCTCGCTTGCATGAC+AGG - chr1_4:501849-501868 Msa0141760:intron 45.0%
TACGTTCCCCATGAGATAGA+TGG - chr1_4:502412-502431 Msa0141760:CDS 45.0%
!! ATTTTGACGTGTTTCCGGTG+GGG + chr1_4:502496-502515 None:intergenic 45.0%
!! CAATTTTGACGTGTTTCCGG+TGG + chr1_4:502498-502517 None:intergenic 45.0%
GAAACTCTCATGGGTCCTCT+TGG - chr1_4:496595-496614 Msa0141760:intron 50.0%
TGTGGTCCTGGTAACAATGG+TGG - chr1_4:497046-497065 Msa0141760:intron 50.0%
CCATCACCACCATTGTTACC+AGG + chr1_4:497055-497074 None:intergenic 50.0%
! CCTGGTAACAATGGTGGTGA+TGG - chr1_4:497052-497071 Msa0141760:intron 50.0%
ACCAAAGTGATGCAGGTGAC+GGG + chr1_4:497089-497108 None:intergenic 50.0%
! CGCTTTGGGTAACAGACCAA+AGG + chr1_4:497118-497137 None:intergenic 50.0%
ACCCAGCATATAGAGGCTTG+GGG + chr1_4:497144-497163 None:intergenic 50.0%
TCTTCAACATGCCACCCAGA+AGG + chr1_4:497786-497805 None:intergenic 50.0%
TTCTGGGTGGCATGTTGAAG+AGG - chr1_4:497785-497804 Msa0141760:intron 50.0%
TCTGGGTGGCATGTTGAAGA+GGG - chr1_4:497786-497805 Msa0141760:intron 50.0%
CTACCAACAGGGAAGAGGAA+GGG + chr1_4:498278-498297 None:intergenic 50.0%
ACTACCAACAGGGAAGAGGA+AGG + chr1_4:498279-498298 None:intergenic 50.0%
CTACCAACAGGGAAGAGGAA+GGG + chr1_4:498278-498297 None:intergenic 50.0%
TCTACCAACAGGGAAGAGGA+AGG + chr1_4:498415-498434 None:intergenic 50.0%
!! GCTATGGCCTTGTCAACTGT+AGG - chr1_4:498600-498619 Msa0141760:intron 50.0%
! GGCCTTGTCAACTGTAGGAA+AGG - chr1_4:498605-498624 Msa0141760:intron 50.0%
CAGGTCTACTAGACTAGGTC+TGG + chr1_4:498745-498764 None:intergenic 50.0%
ACGAGGAAACTCCTTGTAGG+GGG - chr1_4:498902-498921 Msa0141760:intron 50.0%
!! TGTGGGGGTGTCTCTTCTTA+CGG - chr1_4:499171-499190 Msa0141760:CDS 50.0%
GTCTTCTCCAGGGAAGCTAA+TGG - chr1_4:499732-499751 Msa0141760:intron 50.0%
TGCAGCAAGCTGCACATATG+AGG + chr1_4:499909-499928 None:intergenic 50.0%
AGAGGTGATAAGGTTCCCCA+TGG + chr1_4:500308-500327 None:intergenic 50.0%
GGGTCCTGAAGGTCTTGATT+TGG - chr1_4:500378-500397 Msa0141760:intron 50.0%
CGTCCTAGAGGTAGTCAGAT+TGG - chr1_4:501404-501423 Msa0141760:intron 50.0%
GCTCCAATCTGACTACCTCT+AGG + chr1_4:501410-501429 None:intergenic 50.0%
TGGAGCAATAGTCAGCAAGC+AGG - chr1_4:501424-501443 Msa0141760:CDS 50.0%
AGAGTTCTGTAGTGCCTGGT+AGG - chr1_4:501523-501542 Msa0141760:intron 50.0%
TCGTGAAGAACATGCCTACC+AGG + chr1_4:501540-501559 None:intergenic 50.0%
TCACGAGCAGTACAAAGAGC+TGG - chr1_4:501554-501573 Msa0141760:intron 50.0%
AATCTCGCTTGCATGACAGG+TGG - chr1_4:501852-501871 Msa0141760:intron 50.0%
GTGTGATGAGTTTACCCCAC+CGG - chr1_4:502479-502498 Msa0141760:CDS 50.0%
!! CTTCAGCGTCGACCAACTCA+TGG - chr1_4:496618-496637 Msa0141760:intron 55.0%
!! CAATGGTGGTGATGGTCTGG+TGG - chr1_4:497060-497079 Msa0141760:intron 55.0%
ACCCCCAAGCCTCTATATGC+TGG - chr1_4:497139-497158 Msa0141760:intron 55.0%
CCCAGCATATAGAGGCTTGG+GGG + chr1_4:497143-497162 None:intergenic 55.0%
CCCCCAAGCCTCTATATGCT+GGG - chr1_4:497140-497159 Msa0141760:intron 55.0%
GTCGATCCCTTTCTTGTCGG+TGG - chr1_4:497296-497315 Msa0141760:intron 55.0%
!! GAGGGAGATGTTGATGGCAC+AGG - chr1_4:497804-497823 Msa0141760:intron 55.0%
!!! GGCCCTCACCACTTTTTAGG+AGG - chr1_4:498031-498050 Msa0141760:intron 55.0%
CGGACACACATGGATGTTCC+AGG + chr1_4:498112-498131 None:intergenic 55.0%
GGAGGCAGACCCCATTAATC+AGG - chr1_4:498210-498229 Msa0141760:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - chr1_4:498272-498291 Msa0141760:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - chr1_4:498272-498291 Msa0141760:intron 55.0%
!! TGCGTTGGCTGCGAGTTTGA+AGG - chr1_4:498569-498588 Msa0141760:intron 55.0%
CGAGGAAACTCCTTGTAGGG+GGG - chr1_4:498903-498922 Msa0141760:intron 55.0%
TCACAAGGTTCCCCCCTACA+AGG + chr1_4:498916-498935 None:intergenic 55.0%
TAGGGGGGAACCTTGTGATC+TGG - chr1_4:498918-498937 Msa0141760:intron 55.0%
TAGGGGTAAACCCTGTGTGC+TGG - chr1_4:499227-499246 Msa0141760:CDS 55.0%
CAACTGGCTGCAGCTCATCA+CGG - chr1_4:499385-499404 Msa0141760:intron 55.0%
! GCTGTGACCATTAGCTTCCC+TGG + chr1_4:499742-499761 None:intergenic 55.0%
! AGATTCGGTTGGGGTCCTGA+AGG - chr1_4:500367-500386 Msa0141760:intron 55.0%
GTGCTAGCAACACACTCTCG+TGG + chr1_4:500795-500814 None:intergenic 55.0%
!! GACTACCTCTAGGACGGCTA+TGG + chr1_4:501400-501419 None:intergenic 55.0%
TTCTGTTACTCCCCTTGGCC+TGG - chr1_4:501646-501665 Msa0141760:CDS 55.0%
ATGTCCGAAGTCCAGGCCAA+GGG + chr1_4:501660-501679 None:intergenic 55.0%
GCTATGGAAGGTTGAGCGGT+TGG - chr1_4:502441-502460 Msa0141760:CDS 55.0%
TGGTCGACGCTGAAGCCAAG+AGG + chr1_4:496613-496632 None:intergenic 60.0%
GCCCGTCACCTGCATCACTT+TGG - chr1_4:497085-497104 Msa0141760:intron 60.0%
! GAGGCTTGGGGGTACGCTTT+GGG + chr1_4:497132-497151 None:intergenic 60.0%
! AGAGGCTTGGGGGTACGCTT+TGG + chr1_4:497133-497152 None:intergenic 60.0%
AAGGGAGGCCTTGGAGAACC+TGG + chr1_4:497675-497694 None:intergenic 60.0%
!!! GGCGGCCCTCACCACTTTTT+AGG - chr1_4:498028-498047 Msa0141760:intron 60.0%
TAATGGGGTCTGCCTCCACC+TGG + chr1_4:498207-498226 None:intergenic 60.0%
ACTCCCCTTGGCCTGGACTT+CGG - chr1_4:501653-501672 Msa0141760:CDS 60.0%
TGTCCGAAGTCCAGGCCAAG+GGG + chr1_4:501659-501678 None:intergenic 60.0%
GATGTCCGAAGTCCAGGCCA+AGG + chr1_4:501661-501680 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 496087 502711 496087 ID=Msa0141760;Name=Msa0141760
chr1_4 mRNA 496087 502711 496087 ID=Msa0141760-mRNA-1;Parent=Msa0141760;Name=Msa0141760-mRNA-1;_AED=0.17;_eAED=0.17;_QI=149|1|1|1|0.92|0.85|14|240|541
chr1_4 exon 496087 496393 496087 ID=Msa0141760-mRNA-1:exon:122;Parent=Msa0141760-mRNA-1
chr1_4 exon 496928 497023 496928 ID=Msa0141760-mRNA-1:exon:121;Parent=Msa0141760-mRNA-1
chr1_4 exon 497203 497273 497203 ID=Msa0141760-mRNA-1:exon:120;Parent=Msa0141760-mRNA-1
chr1_4 exon 497353 497457 497353 ID=Msa0141760-mRNA-1:exon:119;Parent=Msa0141760-mRNA-1
chr1_4 exon 499163 499253 499163 ID=Msa0141760-mRNA-1:exon:118;Parent=Msa0141760-mRNA-1
chr1_4 exon 499350 499400 499350 ID=Msa0141760-mRNA-1:exon:117;Parent=Msa0141760-mRNA-1
chr1_4 exon 500161 500249 500161 ID=Msa0141760-mRNA-1:exon:116;Parent=Msa0141760-mRNA-1
chr1_4 exon 500567 500809 500567 ID=Msa0141760-mRNA-1:exon:115;Parent=Msa0141760-mRNA-1
chr1_4 exon 500953 501122 500953 ID=Msa0141760-mRNA-1:exon:114;Parent=Msa0141760-mRNA-1
chr1_4 exon 501408 501513 501408 ID=Msa0141760-mRNA-1:exon:113;Parent=Msa0141760-mRNA-1
chr1_4 exon 501624 501791 501624 ID=Msa0141760-mRNA-1:exon:112;Parent=Msa0141760-mRNA-1
chr1_4 exon 502036 502074 502036 ID=Msa0141760-mRNA-1:exon:111;Parent=Msa0141760-mRNA-1
chr1_4 exon 502159 502329 502159 ID=Msa0141760-mRNA-1:exon:110;Parent=Msa0141760-mRNA-1
chr1_4 exon 502404 502711 502404 ID=Msa0141760-mRNA-1:exon:109;Parent=Msa0141760-mRNA-1
chr1_4 five_prime_UTR 502563 502711 502563 ID=Msa0141760-mRNA-1:five_prime_utr;Parent=Msa0141760-mRNA-1
chr1_4 CDS 502404 502562 502404 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 502159 502329 502159 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 502036 502074 502036 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 501624 501791 501624 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 501408 501513 501408 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 500953 501122 500953 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 500567 500809 500567 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 500161 500249 500161 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 499350 499400 499350 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 499163 499253 499163 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 497353 497457 497353 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 497203 497273 497203 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 496928 497023 496928 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 CDS 496327 496393 496327 ID=Msa0141760-mRNA-1:cds;Parent=Msa0141760-mRNA-1
chr1_4 three_prime_UTR 496087 496326 496087 ID=Msa0141760-mRNA-1:three_prime_utr;Parent=Msa0141760-mRNA-1
Gene Sequence

>Msa0141760

ATGCGTTCATTGATGGTACATTTATATGGAAGAAGAAGAAGAAGCATGATATTGACATCCCCATACAACAACATTACCAATTCACTATCACTCATTCATAACCACAATTATTATTATTTCTCTACTAATCACAAACCTCCCTTTCTTCAATTCTTCTCCGGTATTCTTCTCAGGCCTACAATTCGATCATTTTCTACCACAATCACTTCTTCCTCTAAAACCATGTCCAATTTCGATTCCGACTCAGTCACTTACCTCAAACAACAAGAAGCTGTTGAGATTGATGAAACTCTCATGGGTCCTCTTGGCTTCAGCGTCGACCAACTCATGGAATTGGCTGGTTTGAGCGTCGCTACTTCCATATATGAGGTTTACAAACCGGACGAGTATAGTCGTGTTCTTACTATATGTGGTCCTGGTAACAATGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTGCATCACTTTGGTTATAAGCCTTTGGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCATTGTCGATCCCTTTCTTGTCGGTGGAAGATCTACCATCAGATTTCTCCAAGGACTTTGACATTCTAGTAGATGCCATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGATTTATTTCTTTTCGTAATAATCATAATCAAATTGGCCAAAAAAGACCGGTTATAGTCTCTGTAGATATTCCTTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGCACAGGAATTAAACCTGATATGTTGATCTCTTTGACCGCGCCAAAATTCTGTGCAAAGAAGTTTGGCGGCCCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACATCCATGTGTGTCCGAATTGGAAAGCCTCCTCAAATCGATATTTCAGCTCTACGAGAGAACTATATCTCTCCAGAATTTCTTGAAGACCAGGTGGAGGCAGACCCCATTAATCAGTTCCGTAAATGGTTTGATGATGCGTTGGCTGCGAGTTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGTAGGAAAGGATGGAAAACCCTCATCACGGATCGTATTGCTAAAAGGCTTTGACAAGGATGGATTTGTGTGGTTCACAAACTATGAAAGTCAAAAGGGATGTGCGTTATCTGAAAATCCACATGCATCAATTCTTTTTTATTGGGATGGTTTAAACCGACAGGTACGTGTGGAGGGGTATGTTCAGAAAGTTTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGTCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTTCTGTAGTGCCTGGTAGGCATGTTCTTCACGAGCAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTGTGATCCCTAAACCTAAAAACTGGGGAGGATACAGGCTAACACCAAATCTTTTTGAATTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATACGTTCCCCATGAGATAGATGGAAAAAAGCTATGGAAGGTTGAGCGGTTGGCTCCCTGA

Protein sequence

>Msa0141760

MRSLMVHLYGRRRRSMILTSPYNNITNSLSLIHNHNYYYFSTNHKPPFLQFFSGILLRPTIRSFSTTITSSSKTMSNFDSDSVTYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPDEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFSKDFDILVDAMFGFSFHGSPRPPFDDLIQRFISFRNNHNQIGQKRPVIVSVDIPSGWHVEEGDVDGTGIKPDMLISLTAPKFCAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEDQVEADPINQFRKWFDDALAASLKEPNAMALSTVGKDGKPSSRIVLLKGFDKDGFVWFTNYESQKGCALSENPHASILFYWDGLNRQVRVEGYVQKVSDEESEQYFHSRPRGSQIGAIVSKQSSVVPGRHVLHEQYKELEQKYADGSVIPKPKNWGGYRLTPNLFEFWQGQKSRLHDRLQYVPHEIDGKKLWKVERLAP*