AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0600280

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0600280 MtrunA17_Chr4g0025201 95.424 743 34 0 1 743 1 743 0.0 1471
Msa0600280 MtrunA17_Chr2g0322361 58.043 746 304 5 1 738 1 745 0.0 886
Msa0600280 MtrunA17_Chr2g0322371 58.277 743 301 5 1 740 1 737 0.0 877
Msa0600280 MtrunA17_Chr2g0322351 58.077 749 294 8 1 742 1 736 0.0 857
Msa0600280 MtrunA17_Chr2g0322341 67.630 346 107 4 1 342 3 347 2.18e-159 465
Msa0600280 MtrunA17_Chr2g0322331 53.646 384 163 5 370 742 1 380 1.33e-136 407
Msa0600280 MtrunA17_Chr4g0073711 33.598 756 432 15 16 711 246 991 1.56e-126 402
Msa0600280 MtrunA17_Chr8g0364641 34.830 735 416 17 28 711 212 934 2.57e-126 400
Msa0600280 MtrunA17_Chr3g0102541 33.907 755 455 16 1 736 1 730 2.60e-125 390
Msa0600280 MtrunA17_Chr3g0102531 34.091 748 448 19 1 730 1 721 7.37e-125 389
Msa0600280 MtrunA17_Chr3g0088821 32.304 777 430 15 18 711 268 1031 1.33e-124 398
Msa0600280 MtrunA17_Chr1g0201731 33.001 803 448 17 16 739 286 1077 7.17e-123 394
Msa0600280 MtrunA17_Chr8g0379241 32.457 761 430 16 21 711 196 942 2.38e-122 390
Msa0600280 MtrunA17_Chr2g0284211 32.372 763 429 17 21 710 181 929 8.80e-121 385
Msa0600280 MtrunA17_Chr7g0267731 31.959 776 434 16 16 711 178 939 1.37e-120 385
Msa0600280 MtrunA17_Chr1g0183381 32.933 750 435 18 18 711 120 857 1.81e-120 383
Msa0600280 MtrunA17_Chr3g0137951 31.955 798 446 15 21 736 281 1063 7.00e-120 385
Msa0600280 MtrunA17_Chr8g0352231 31.890 762 423 15 33 711 283 1031 1.34e-119 385
Msa0600280 MtrunA17_Chr8g0383701 31.964 779 434 15 16 711 284 1049 1.71e-119 385
Msa0600280 MtrunA17_Chr3g0102551 31.641 768 440 15 8 734 10 733 4.53e-117 369
Msa0600280 MtrunA17_Chr3g0078671 32.822 783 416 23 26 715 239 1004 1.58e-115 373
Msa0600280 MtrunA17_Chr4g0046401 30.170 706 456 15 22 710 21 706 1.31e-106 342
Msa0600280 MtrunA17_Chr1g0165411 29.844 831 446 19 21 734 261 1071 3.29e-102 338
Msa0600280 MtrunA17_Chr5g0410641 29.489 841 447 21 21 734 268 1089 4.31e-102 338
Msa0600280 MtrunA17_Chr1g0186381 29.918 732 455 17 29 735 33 731 6.23e-102 329
Msa0600280 MtrunA17_Chr2g0307191 30.229 698 437 18 31 715 29 689 1.54e-101 327
Msa0600280 MtrunA17_Chr3g0077511 31.241 701 424 21 28 710 26 686 9.33e-101 325
Msa0600280 MtrunA17_Chr2g0298581 31.169 693 433 19 28 710 26 684 3.94e-100 323
Msa0600280 MtrunA17_Chr4g0039801 28.808 847 458 19 21 736 289 1121 1.64e-98 329
Msa0600280 MtrunA17_Chr7g0269741 28.935 826 440 19 21 711 313 1126 1.46e-97 327
Msa0600280 MtrunA17_Chr3g0095791 28.814 708 455 19 14 710 14 683 6.21e-95 310
Msa0600280 MtrunA17_Chr1g0165421 27.791 824 451 19 21 711 275 1087 6.31e-84 288
Msa0600280 MtrunA17_Chr7g0274751 31.424 646 318 19 21 576 112 722 1.13e-81 277
Msa0600280 MtrunA17_Chr2g0296991 39.211 380 214 6 18 380 219 598 5.61e-77 268
Msa0600280 MtrunA17_Chr2g0296991 29.499 339 215 7 380 710 674 996 6.73e-40 158
Msa0600280 MtrunA17_Chr2g0297351 26.506 830 445 21 21 710 175 979 2.96e-73 257
Msa0600280 MtrunA17_Chr2g0307241 39.024 164 92 4 29 188 27 186 6.53e-30 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0600280 AT2G32540.1 45.491 754 376 9 8 737 10 752 0.0 642
Msa0600280 AT2G32530.1 43.709 755 388 10 8 737 10 752 0.0 638
Msa0600280 AT4G15320.3 43.099 768 394 14 1 737 1 756 0.0 614
Msa0600280 AT4G15320.5 43.137 765 392 14 1 734 1 753 0.0 613
Msa0600280 AT4G15320.4 42.273 783 394 15 1 737 1 771 0.0 605
Msa0600280 AT2G32620.1 43.444 755 392 12 8 737 10 754 0.0 602
Msa0600280 AT2G32610.1 42.517 755 401 11 8 737 10 756 0.0 586
Msa0600280 AT4G15290.1 42.895 753 393 12 8 734 10 751 0.0 577
Msa0600280 AT2G32620.4 43.413 668 343 12 95 737 1 658 0.0 536
Msa0600280 AT2G32620.3 45.576 599 302 10 8 592 10 598 3.61e-176 518
Msa0600280 AT4G15320.2 40.793 706 330 14 1 644 1 680 4.41e-175 521
Msa0600280 AT4G15320.1 38.451 749 330 16 1 644 1 723 8.75e-166 499
Msa0600280 AT2G32620.2 47.961 515 245 9 8 508 10 515 3.07e-160 475
Msa0600280 AT5G09870.1 33.463 774 427 15 16 711 259 1022 1.54e-130 414
Msa0600280 AT5G64740.1 32.947 777 430 15 16 711 271 1037 4.70e-128 407
Msa0600280 AT5G05170.1 32.990 776 425 16 18 711 256 1018 5.84e-126 402
Msa0600280 AT5G17420.1 33.289 757 432 16 16 710 233 978 2.64e-125 399
Msa0600280 AT4G18780.1 32.898 766 424 16 21 710 184 935 6.95e-123 392
Msa0600280 AT2G25540.1 31.955 798 446 16 21 736 255 1037 3.54e-121 389
Msa0600280 AT2G21770.1 32.338 770 417 18 28 711 289 1040 6.53e-121 389
Msa0600280 AT1G55850.1 33.059 729 427 11 21 730 33 719 3.79e-119 375
Msa0600280 AT4G32410.1 32.558 774 424 17 21 711 275 1033 4.84e-119 384
Msa0600280 AT4G39350.1 31.995 772 418 18 28 711 284 1036 6.00e-112 365
Msa0600280 AT4G24010.1 32.668 701 401 19 28 702 37 692 1.25e-108 348
Msa0600280 AT4G24000.1 32.681 664 395 16 28 676 34 660 1.54e-108 347
Msa0600280 AT1G32180.1 29.128 872 449 24 21 743 122 973 1.55e-106 348
Msa0600280 AT1G32180.2 29.128 872 449 24 21 743 122 973 1.55e-106 348
Msa0600280 AT4G23990.1 32.701 633 376 13 63 677 90 690 4.80e-105 338
Msa0600280 AT1G02730.1 29.638 857 449 22 21 736 318 1161 1.45e-101 338
Msa0600280 AT2G33100.2 27.953 855 469 19 21 742 183 1023 8.88e-97 323
Msa0600280 AT2G33100.1 27.953 855 469 19 21 742 183 1023 8.88e-97 323
Msa0600280 AT3G03050.1 28.860 842 462 21 21 736 294 1124 2.36e-95 321
Msa0600280 AT4G38190.1 27.791 824 477 18 21 736 272 1085 1.61e-94 318
Msa0600280 AT5G16910.1 27.924 838 472 20 21 736 297 1124 5.29e-94 317
Msa0600280 AT5G44030.1 38.743 382 215 6 21 384 215 595 2.05e-77 270
Msa0600280 AT5G44030.1 30.925 346 211 7 376 710 673 1001 1.82e-42 167
Msa0600280 AT5G44030.2 38.743 382 215 6 21 384 244 624 2.97e-77 270
Msa0600280 AT5G44030.2 30.925 346 211 7 376 710 702 1030 1.54e-42 167
Msa0600280 AT4G24000.2 32.604 457 274 9 225 676 41 468 6.82e-71 241
Msa0600280 AT5G44030.3 40.909 308 170 4 88 384 10 316 1.22e-67 238
Msa0600280 AT5G44030.3 30.612 343 216 6 376 710 394 722 4.22e-43 167
Msa0600280 AT4G23990.2 30.938 501 302 13 195 677 2 476 3.14e-67 231

Find 168 sgRNAs with CRISPR-Local

Find 328 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGTAAGCTTGGGATAGATTT+TGG 0.112878 4_2:-41244394 None:intergenic
AAAAGTACAATGTGCAAATT+AGG 0.126668 4_2:+41244100 Msa0600280:CDS
CTATTTGAAACGGGTAAATT+TGG 0.159647 4_2:+41247877 Msa0600280:CDS
AAGGCATGCATAACAATATT+TGG 0.170240 4_2:-41245662 None:intergenic
CCTGAATTTATAAGGTTATA+TGG 0.180091 4_2:+41245364 Msa0600280:intron
CATAGAAGAAAAGTTATTTA+TGG 0.192304 4_2:+41246010 Msa0600280:CDS
TTTCAGCCACAAAGTTTAAA+TGG 0.208113 4_2:+41247778 Msa0600280:CDS
ACCATTCTTGTCTGAATTCT+TGG 0.215541 4_2:-41244170 None:intergenic
CTAAGTAGAAGGACAATTTC+TGG 0.216905 4_2:+41247955 Msa0600280:CDS
TGCACTTGTGGATTCTTGTT+TGG 0.222239 4_2:+41248134 Msa0600280:three_prime_UTR
ATATACTCTATACGAATATT+TGG 0.236281 4_2:+41247477 Msa0600280:CDS
TCATAGAGTGGAAGAGAGTT+TGG 0.245382 4_2:-41242532 None:intergenic
GCTATCGAAGTTGCTTCTTA+TGG 0.273391 4_2:+41246293 Msa0600280:CDS
GCACTTGTGGATTCTTGTTT+GGG 0.290163 4_2:+41248135 Msa0600280:three_prime_UTR
TGAAGAGCATAGAAGATTAG+AGG 0.303612 4_2:-41244036 None:intergenic
GCTCACCTCTGGCAGGAAAT+AGG 0.305479 4_2:-41246812 None:intergenic
TGTATTTGATCATATGTTAT+TGG 0.310371 4_2:+41247839 Msa0600280:CDS
GCAATATTTATCAAGTTGTT+TGG 0.318110 4_2:+41247754 Msa0600280:CDS
CACAAACAGTACCTTGATTA+TGG 0.319801 4_2:-41244467 None:intergenic
TGTCAATTGCAACAATAAAA+TGG 0.321039 4_2:-41247731 None:intergenic
ATGACAGAAGATATACTAAC+TGG 0.326040 4_2:+41246499 Msa0600280:CDS
ACTGTTCTACTCAAATTGTT+AGG 0.328449 4_2:+41247586 Msa0600280:CDS
TAATTTCCATTTAAACTTTG+TGG 0.330588 4_2:-41247784 None:intergenic
ACACTCAAAGACGATCCTTT+TGG 0.332746 4_2:+41245755 Msa0600280:CDS
TTGAAATGATGTGGTTGCTT+TGG 0.334476 4_2:-41245450 None:intergenic
AACAATAAAATGGCAGTTCC+TGG 0.341781 4_2:-41247721 None:intergenic
ACAGGTTGTGCTCCAATTGA+TGG 0.341818 4_2:+41246583 Msa0600280:CDS
TCATCACAAAAGTATCTAAA+TGG 0.346788 4_2:-41244126 None:intergenic
CGGCACTGGCTGGGGTAAAC+AGG 0.353921 4_2:+41246325 Msa0600280:CDS
CTTATATGTGGATCATGAAC+TGG 0.357355 4_2:+41246725 Msa0600280:CDS
TTGTCTGAATTCTTGGTCAT+TGG 0.361801 4_2:-41244163 None:intergenic
TTCAAAATTTGCAAAACATT+GGG 0.368080 4_2:+41244065 Msa0600280:CDS
GAAATAATTTACAATTTGTA+AGG 0.370384 4_2:-41248044 None:intergenic
TGGATCATGAACTGGGGATT+TGG 0.370780 4_2:+41246733 Msa0600280:CDS
AAACATGGTTCACCTTATCT+TGG 0.371514 4_2:+41242689 Msa0600280:CDS
TATTTGAAACGGGTAAATTT+GGG 0.371926 4_2:+41247878 Msa0600280:CDS
GCTTGTTACGTTTCTGATGA+TGG 0.375639 4_2:+41244006 Msa0600280:CDS
GAGTGTAGCATAGAATTGTT+GGG 0.378771 4_2:-41245738 None:intergenic
GAAATCAGTTAGTCATGCTT+TGG 0.381366 4_2:+41246217 Msa0600280:CDS
CTGAATTTATAAGGTTATAT+GGG 0.383143 4_2:+41245365 Msa0600280:intron
TTAGTCATGCTTTGGAAGAT+AGG 0.384348 4_2:+41246225 Msa0600280:CDS
GTTATTCAGACAAGAATCTC+TGG 0.385137 4_2:+41245581 Msa0600280:intron
ATCAATATCACTAGCTGAAT+AGG 0.385336 4_2:-41246249 None:intergenic
TATATTCCTACTGCAATAGT+TGG 0.400122 4_2:+41247442 Msa0600280:CDS
CCTGTGAAGGCTATTGGTTC+TGG 0.400123 4_2:-41246565 None:intergenic
AAGTGCAGTGCTTGCAGTCT+TGG 0.402322 4_2:-41248118 None:intergenic
CATAGAGTGGAAGAGAGTTT+GGG 0.403453 4_2:-41242531 None:intergenic
ATACAGGTGGGGCCATCAAT+TGG 0.406422 4_2:-41246595 None:intergenic
AAAGTACAATGTGCAAATTA+GGG 0.407961 4_2:+41244101 Msa0600280:CDS
TACCTTTGGAGGAGACGGTC+AGG 0.411734 4_2:-41242760 None:intergenic
GCACAACCTGTGAAGGCTAT+TGG 0.414383 4_2:-41246571 None:intergenic
TGAGTGTAGCATAGAATTGT+TGG 0.415415 4_2:-41245739 None:intergenic
CTTCAAAATTTGCAAAACAT+TGG 0.416834 4_2:+41244064 Msa0600280:CDS
GCATAACATACTTGAGCAAC+TGG 0.416847 4_2:-41246757 None:intergenic
TTGTGGATTCTTGTTTGGGA+TGG 0.418454 4_2:+41248139 Msa0600280:three_prime_UTR
TGAACAACTACTCTATTCCT+TGG 0.420933 4_2:+41242647 Msa0600280:CDS
AACTCTCCTTCAAGTAAGCT+TGG 0.422451 4_2:-41244406 None:intergenic
TTCCTCCGTAGAACATTCCT+TGG 0.423092 4_2:-41245976 None:intergenic
GGCAATTCTTAGCTTATATG+TGG 0.428041 4_2:+41246713 Msa0600280:CDS
GGTACAAACACAATTACAAA+AGG 0.432125 4_2:+41242563 Msa0600280:CDS
ACAGTGTTTATTGTGATGAT+TGG 0.432496 4_2:-41243943 None:intergenic
GCTTCTTATGGATATGAATA+CGG 0.432768 4_2:+41246305 Msa0600280:CDS
GATATGAATACGGCACTGGC+TGG 0.441391 4_2:+41246315 Msa0600280:CDS
TCTCTTATGTTGAGCCATAC+AGG 0.444479 4_2:-41246611 None:intergenic
GACTGCAAGCACTGCACTTG+TGG 0.447725 4_2:+41248122 Msa0600280:three_prime_UTR
TCTATCCCAAGCTTACTTGA+AGG 0.451031 4_2:+41244400 Msa0600280:CDS
TGTGGATTCTTGTTTGGGAT+GGG 0.452073 4_2:+41248140 Msa0600280:three_prime_UTR
TTGAGAGGACTATTTGAAAC+GGG 0.456847 4_2:+41247868 Msa0600280:CDS
AATTGATGGCCCCACCTGTA+TGG 0.457674 4_2:+41246597 Msa0600280:CDS
CTCTCCGGATGACGTAGAAA+AGG 0.462366 4_2:+41246036 Msa0600280:CDS
TACCTTGGAGCAGGATTAGC+AGG 0.473026 4_2:+41245950 Msa0600280:CDS
AACAGTACCTTGATTATGGC+TGG 0.473416 4_2:-41244463 None:intergenic
AACAAAGAAATGGCTGAAGA+TGG 0.473942 4_2:+41245390 Msa0600280:CDS
GGTAACCAAGCAACAACAAA+AGG 0.481449 4_2:-41242612 None:intergenic
AGAATAACATCTATGAATGC+TGG 0.482111 4_2:+41247547 Msa0600280:CDS
ATATGAATACGGCACTGGCT+GGG 0.484690 4_2:+41246316 Msa0600280:CDS
ACAAGAATGGTTACAAATGA+AGG 0.486277 4_2:+41244182 Msa0600280:CDS
TATATGGGAGAACAAAGAAA+TGG 0.486548 4_2:+41245380 Msa0600280:CDS
TTTCAATGCTCACCTCTGGC+AGG 0.487220 4_2:-41246819 None:intergenic
CTATACGAATATTTGGCCTC+AGG 0.491152 4_2:+41247484 Msa0600280:CDS
ATTGCCATTTGATTTCCAAA+AGG 0.492263 4_2:-41245770 None:intergenic
TATGAATACGGCACTGGCTG+GGG 0.500144 4_2:+41246317 Msa0600280:CDS
AGAAAGATCTTCCTCCCTCT+AGG 0.503118 4_2:+41247638 Msa0600280:CDS
CAATAGTCAAATACCTTTGG+AGG 0.504802 4_2:-41242771 None:intergenic
ATATTCCTACTGCAATAGTT+GGG 0.507014 4_2:+41247443 Msa0600280:CDS
ACTCTCCTTCAAGTAAGCTT+GGG 0.509268 4_2:-41244405 None:intergenic
GTCACAAATATATCCACTGC+TGG 0.509996 4_2:-41243895 None:intergenic
TGGAAATTATGAGTGTGGTT+TGG 0.513593 4_2:+41247798 Msa0600280:CDS
TTAAATGGAAATTATGAGTG+TGG 0.516644 4_2:+41247793 Msa0600280:CDS
GTGTTTATTGTGATGATTGG+TGG 0.517309 4_2:-41243940 None:intergenic
TTTGAGAGGACTATTTGAAA+CGG 0.519798 4_2:+41247867 Msa0600280:CDS
CTTGGACAAGTGCTACACTT+TGG 0.522574 4_2:-41248100 None:intergenic
GATGGTGAAAATCCAAGATA+AGG 0.523281 4_2:-41242701 None:intergenic
TGATGTTAACAAAGCTGTTG+AGG 0.535514 4_2:+41246268 Msa0600280:CDS
ATCACCTTAGCTAAGATCAA+TGG 0.537668 4_2:+41242504 Msa0600280:exon
GAAAGATCTTCCTCCCTCTA+GGG 0.544091 4_2:+41247639 Msa0600280:CDS
TACCAACACATTCATAGCAC+CGG 0.545351 4_2:-41245475 None:intergenic
TTATTCAGACAAGAATCTCT+GGG 0.545619 4_2:+41245582 Msa0600280:intron
GTTCAACATGAAGGGTGCAT+TGG 0.545978 4_2:-41245612 None:intergenic
TAAATCCCAACTATTGCAGT+AGG 0.548363 4_2:-41247448 None:intergenic
AAGCATGGTGGAACAATCAA+AGG 0.548964 4_2:+41247518 Msa0600280:CDS
AGTTATTTATGGTCTCTCTC+CGG 0.549554 4_2:+41246021 Msa0600280:CDS
GTATGGCTCAACATAAGAGA+TGG 0.552428 4_2:+41246614 Msa0600280:CDS
TTGCTTTGAGTTGCGAAACA+TGG 0.553598 4_2:+41242674 Msa0600280:CDS
CAACATAAGAGATGGGCCAC+AGG 0.555868 4_2:+41246622 Msa0600280:CDS
TCTATGAATGCTGGATTCTG+TGG 0.557758 4_2:+41247556 Msa0600280:CDS
TATGGATATGAATACGGCAC+TGG 0.557824 4_2:+41246311 Msa0600280:CDS
TCTCCGGATGACGTAGAAAA+GGG 0.558666 4_2:+41246037 Msa0600280:CDS
CTCTGGCAGGAAATAGGAGT+TGG 0.558970 4_2:-41246806 None:intergenic
TTATGTTGAGCCATACAGGT+GGG 0.559671 4_2:-41246607 None:intergenic
TTGGCCATTGATCTTAGCTA+AGG 0.559860 4_2:-41242508 None:intergenic
ACAGTCCACGTTCAACATGA+AGG 0.559978 4_2:-41245621 None:intergenic
AGGAAACAACTTATGTAAAG+TGG 0.560015 4_2:+41246157 Msa0600280:intron
ACCAAGAATTCAGACAAGAA+TGG 0.561970 4_2:+41244169 Msa0600280:CDS
CAACCACATCATTTCAAAGC+CGG 0.562761 4_2:+41245456 Msa0600280:CDS
AAATCATCCAGCCATAATCA+AGG 0.569735 4_2:+41244456 Msa0600280:CDS
TAATGTAAACTACAGTACCT+TGG 0.570475 4_2:+41245935 Msa0600280:intron
TTATATGTGGATCATGAACT+GGG 0.572236 4_2:+41246726 Msa0600280:CDS
GTACAAACACAATTACAAAA+GGG 0.574146 4_2:+41242564 Msa0600280:CDS
CCAGAACCAATAGCCTTCAC+AGG 0.576406 4_2:+41246565 Msa0600280:CDS
AAACTACAGTACCTTGGAGC+AGG 0.577144 4_2:+41245941 Msa0600280:intron
GCAGGATTAGCAGGACTCCA+AGG 0.577239 4_2:+41245959 Msa0600280:CDS
ACCTTTGGAGGAGACGGTCA+GGG 0.577615 4_2:-41242759 None:intergenic
TCAAATACCTTTGGAGGAGA+CGG 0.578586 4_2:-41242765 None:intergenic
AATTGGAGCACAACCTGTGA+AGG 0.582766 4_2:-41246578 None:intergenic
CTCGTTGAAAGTGTATCTAC+CGG 0.585204 4_2:-41247683 None:intergenic
GGACTCCAAGGAATGTTCTA+CGG 0.586185 4_2:+41245971 Msa0600280:CDS
TTGGAGGAGACGGTCAGGGT+TGG 0.591314 4_2:-41242755 None:intergenic
ACCCTGACCGTCTCCTCCAA+AGG 0.592049 4_2:+41242758 Msa0600280:CDS
TAACAAGCTAGCTTGTGAGA+TGG 0.592884 4_2:-41243991 None:intergenic
ATTTGTTCAATACAGGATTG+GGG 0.593445 4_2:+41247415 Msa0600280:intron
TATGGCTCAACATAAGAGAT+GGG 0.599447 4_2:+41246615 Msa0600280:CDS
CCTTTGCATATTGTAGACAA+AGG 0.599656 4_2:-41247904 None:intergenic
TCTTAGCCGTAAAATAGATG+TGG 0.602585 4_2:+41244369 Msa0600280:CDS
CTAGATATGTAGATCAAATG+TGG 0.606209 4_2:-41245417 None:intergenic
TGGACTCCATTGAGTGGAGA+TGG 0.606499 4_2:-41242719 None:intergenic
GATCGACATGATAAGAATGC+CGG 0.612891 4_2:+41247664 Msa0600280:CDS
TGGTAATGATGCAATATGCA+AGG 0.616220 4_2:-41246786 None:intergenic
TATGTTGAGCCATACAGGTG+GGG 0.616917 4_2:-41246606 None:intergenic
CCTTTGTCTACAATATGCAA+AGG 0.617973 4_2:+41247904 Msa0600280:CDS
AGTGTAGCATAGAATTGTTG+GGG 0.620173 4_2:-41245737 None:intergenic
CAGGATTGTCAATTAAAGCA+TGG 0.620840 4_2:+41247503 Msa0600280:CDS
CAGTCCACGTTCAACATGAA+GGG 0.622642 4_2:-41245620 None:intergenic
GTCCTGCTAATCCTGCTCCA+AGG 0.623330 4_2:-41245952 None:intergenic
TGTGCAAGAACTTCCAGCAG+TGG 0.635221 4_2:+41243882 Msa0600280:CDS
TCTACATATCTAGAGAGAAG+AGG 0.638871 4_2:+41245427 Msa0600280:CDS
AAAGGCTGGACTCCATTGAG+TGG 0.643881 4_2:-41242725 None:intergenic
CAACTCCTATTTCCTGCCAG+AGG 0.644209 4_2:+41246807 Msa0600280:CDS
AACCAAGCAACAACAAAAGG+AGG 0.647360 4_2:-41242609 None:intergenic
GGAGTCAAGCAAAATGCACA+AGG 0.647589 4_2:-41245681 None:intergenic
TCATGTCGATCATCCCTAGA+GGG 0.649781 4_2:-41247652 None:intergenic
CTTATGTTGAGCCATACAGG+TGG 0.652213 4_2:-41246608 None:intergenic
CAACTCAAAGCAATAAACCA+AGG 0.655551 4_2:-41242664 None:intergenic
TGCACCCTTCATGTTGAACG+TGG 0.656187 4_2:+41245616 Msa0600280:CDS
GCACCGGCTTTGAAATGATG+TGG 0.666221 4_2:-41245459 None:intergenic
TGACAGAAGATATACTAACT+GGG 0.667224 4_2:+41246500 Msa0600280:CDS
TGCTTTAATTGACAATCCTG+AGG 0.667385 4_2:-41247500 None:intergenic
AGCCGGTGCTATGAATGTGT+TGG 0.669526 4_2:+41245473 Msa0600280:CDS
GATTGTCAATTAAAGCATGG+TGG 0.679877 4_2:+41247506 Msa0600280:CDS
GAGTGGAAGAGAGTTTGGGT+TGG 0.681543 4_2:-41242527 None:intergenic
GAAGATCTCAAGCATTCCTG+TGG 0.685486 4_2:-41246638 None:intergenic
TGTCGATCATCCCTAGAGGG+AGG 0.686634 4_2:-41247649 None:intergenic
AGTTGTTCACATACATAACA+CGG 0.687770 4_2:-41242633 None:intergenic
ATCATGTCGATCATCCCTAG+AGG 0.694349 4_2:-41247653 None:intergenic
TGCACGTGTATACGGTGGTG+AGG 0.709674 4_2:-41242466 None:intergenic
CTCCAAGGAATGTTCTACGG+AGG 0.709897 4_2:+41245974 Msa0600280:CDS
TTGTATGCACGTGTATACGG+TGG 0.729465 4_2:-41242471 None:intergenic
TATATGTGGATCATGAACTG+GGG 0.731139 4_2:+41246727 Msa0600280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTATTTTATTTTT+AGG - chr4_2:41243748-41243767 None:intergenic 0.0%
!!! TTTTAATTTATATTAGTGAT+CGG + chr4_2:41243010-41243029 Msa0600280:intron 10.0%
!!! TTTAAAAATCACAATTTTTT+GGG + chr4_2:41243483-41243502 Msa0600280:intron 10.0%
!!! TTTTTTTTTTAAGGAAAAAT+TGG - chr4_2:41244698-41244717 None:intergenic 10.0%
!! TATATGTTACTAATTTAATT+AGG + chr4_2:41246075-41246094 Msa0600280:intron 10.0%
!! ATATGTTACTAATTTAATTA+GGG + chr4_2:41246076-41246095 Msa0600280:intron 10.0%
!! ACAAATTCAATAATAATAAA+AGG - chr4_2:41247255-41247274 None:intergenic 10.0%
!!! TTTTATTATTATTGAATTTG+TGG + chr4_2:41247254-41247273 Msa0600280:intron 10.0%
!! TGATAAATTAATTGTTATGA+AGG - chr4_2:41242823-41242842 None:intergenic 15.0%
!!! ATTTATTTTCTTAGAAGTTT+TGG + chr4_2:41242861-41242880 Msa0600280:intron 15.0%
!!! TTTTCTGTTATAATAGTTAT+CGG - chr4_2:41242899-41242918 None:intergenic 15.0%
!! AATTTATGTTTATTGAAAAG+CGG + chr4_2:41242926-41242945 Msa0600280:intron 15.0%
!!! TTTTCAAATATTTACTCAAA+TGG + chr4_2:41243097-41243116 Msa0600280:intron 15.0%
!!! AATTATGTTTCATCTAAAAT+AGG - chr4_2:41243259-41243278 None:intergenic 15.0%
!!! TATTTTTAAATTCGAGTTTA+TGG + chr4_2:41243287-41243306 Msa0600280:intron 15.0%
!!! GTCAAAAATCATTAATTTTT+GGG - chr4_2:41243366-41243385 None:intergenic 15.0%
!!! GTTTAAAAATCACAATTTTT+TGG + chr4_2:41243482-41243501 Msa0600280:intron 15.0%
!! ATTCAAATTTCATAATAGTT+TGG - chr4_2:41243583-41243602 None:intergenic 15.0%
!!! AAAAGATATTTTAAAACGAA+GGG - chr4_2:41244763-41244782 None:intergenic 15.0%
!!! TAAAAGATATTTTAAAACGA+AGG - chr4_2:41244764-41244783 None:intergenic 15.0%
!!! AAATTCTTTAGAATCTTAAA+TGG + chr4_2:41245497-41245516 Msa0600280:intron 15.0%
!! TACAAATTGAAAATATGTTA+GGG - chr4_2:41245536-41245555 None:intergenic 15.0%
!! ATACAAATTGAAAATATGTT+AGG - chr4_2:41245537-41245556 None:intergenic 15.0%
!!! ATTGCATTTATTATTTTCAT+AGG - chr4_2:41247185-41247204 None:intergenic 15.0%
!! TATGAAAATAATAAATGCAA+TGG + chr4_2:41247184-41247203 Msa0600280:intron 15.0%
!! GAAATAATTTACAATTTGTA+AGG - chr4_2:41248047-41248066 None:intergenic 15.0%
!! ATAATATTGATCAGATACAT+CGG + chr4_2:41242962-41242981 Msa0600280:intron 20.0%
!!! GGTCAAAAATCATTAATTTT+TGG - chr4_2:41243367-41243386 None:intergenic 20.0%
!! CAGAATTATAGAATTATAAC+TGG + chr4_2:41243434-41243453 Msa0600280:intron 20.0%
!! AATTATAGAATTATAACTGG+TGG + chr4_2:41243437-41243456 Msa0600280:intron 20.0%
!! ATTATAGAATTATAACTGGT+GGG + chr4_2:41243438-41243457 Msa0600280:intron 20.0%
!!! TTTGGTTCTTAATAGTTTTT+AGG - chr4_2:41243565-41243584 None:intergenic 20.0%
!! TTCAAAATTTGCAAAACATT+GGG + chr4_2:41244065-41244084 Msa0600280:CDS 20.0%
!!! ACATTGTACTTTTTACAAAA+TGG - chr4_2:41244093-41244112 None:intergenic 20.0%
!! GAATCAAATATTCATGAATT+CGG - chr4_2:41244658-41244677 None:intergenic 20.0%
!! AAATTGTATAATATATGCAG+AGG + chr4_2:41245061-41245080 Msa0600280:intron 20.0%
!!! TTCATGATGAATGTTTTTTT+TGG - chr4_2:41245159-41245178 None:intergenic 20.0%
!! CTGAATTTATAAGGTTATAT+GGG + chr4_2:41245365-41245384 Msa0600280:intron 20.0%
!! CATAGAAGAAAAGTTATTTA+TGG + chr4_2:41246010-41246029 Msa0600280:CDS 20.0%
!! AAAAGAAAGTTTACCAAAAA+CGG - chr4_2:41246692-41246711 None:intergenic 20.0%
!!! TTTTTGGTAAACTTTCTTTT+AGG + chr4_2:41246692-41246711 Msa0600280:CDS 20.0%
!!! TTTTGTAATTTGTTCAATAC+AGG + chr4_2:41247408-41247427 Msa0600280:intron 20.0%
!! ATATACTCTATACGAATATT+TGG + chr4_2:41247477-41247496 Msa0600280:CDS 20.0%
!! TAATTTCCATTTAAACTTTG+TGG - chr4_2:41247787-41247806 None:intergenic 20.0%
!! TGTATTTGATCATATGTTAT+TGG + chr4_2:41247839-41247858 Msa0600280:CDS 20.0%
! TTCCACTCTATGAAAAATAT+TGG + chr4_2:41242542-41242561 Msa0600280:CDS 25.0%
!! TACCAATATTTTTCATAGAG+TGG - chr4_2:41242547-41242566 None:intergenic 25.0%
! GTACAAACACAATTACAAAA+GGG + chr4_2:41242564-41242583 Msa0600280:CDS 25.0%
! AATCAATAGTCAAATACCTT+TGG - chr4_2:41242777-41242796 None:intergenic 25.0%
! AATTTATATTAGTGATCGGA+TGG + chr4_2:41243014-41243033 Msa0600280:intron 25.0%
!! TATGTTTCATCTAAAATAGG+AGG - chr4_2:41243256-41243275 None:intergenic 25.0%
!! TGATTTTTAAACCCTAAAGT+GGG - chr4_2:41243474-41243493 None:intergenic 25.0%
! CTTCAAAATTTGCAAAACAT+TGG + chr4_2:41244064-41244083 Msa0600280:CDS 25.0%
!! AAAAGTACAATGTGCAAATT+AGG + chr4_2:41244100-41244119 Msa0600280:CDS 25.0%
! AAAGTACAATGTGCAAATTA+GGG + chr4_2:41244101-41244120 Msa0600280:CDS 25.0%
!!! TCATCACAAAAGTATCTAAA+TGG - chr4_2:41244129-41244148 None:intergenic 25.0%
! TGCATTATTATTAGTATCAC+TGG - chr4_2:41244257-41244276 None:intergenic 25.0%
! TCAATATTGGTGAACAAAAT+TGG - chr4_2:41244734-41244753 None:intergenic 25.0%
!!! GTTATTTTCACTTTTCAATG+TGG - chr4_2:41244957-41244976 None:intergenic 25.0%
!!! CTTTTTAAGGAGAATAAGTT+GGG - chr4_2:41245108-41245127 None:intergenic 25.0%
! ATTACTTGCAAAAATAACAC+TGG + chr4_2:41245229-41245248 Msa0600280:intron 25.0%
!! TTTCTTTTGACAGGTAATTA+AGG - chr4_2:41245312-41245331 None:intergenic 25.0%
! CCATATAACCTTATAAATTC+AGG - chr4_2:41245367-41245386 None:intergenic 25.0%
! CCTGAATTTATAAGGTTATA+TGG + chr4_2:41245364-41245383 Msa0600280:intron 25.0%
!! TCAAATGGCAATTTTGTATA+AGG + chr4_2:41245781-41245800 Msa0600280:CDS 25.0%
!!! ATCATAACATGACTCTTTTT+TGG + chr4_2:41246106-41246125 Msa0600280:intron 25.0%
! GTGGAGTTAAAACAAAAATT+TGG + chr4_2:41246176-41246195 Msa0600280:CDS 25.0%
! AACAAAACAAAACAAAACAC+AGG - chr4_2:41246385-41246404 None:intergenic 25.0%
!! ATGTAGCGGTTAATAAATTT+TGG + chr4_2:41246433-41246452 Msa0600280:intron 25.0%
!!! AAATTTTGGTTTGATCTTGT+TGG + chr4_2:41246447-41246466 Msa0600280:intron 25.0%
!! TTTGATCTTGTTGGAATTTT+AGG + chr4_2:41246456-41246475 Msa0600280:intron 25.0%
!! ACACTTTTAATATGAAGTGT+CGG - chr4_2:41246922-41246941 None:intergenic 25.0%
! ACTATGTTTGATTCTTCAAT+AGG - chr4_2:41247122-41247141 None:intergenic 25.0%
! ATTGAATTTGTGGAAAATGT+AGG + chr4_2:41247264-41247283 Msa0600280:intron 25.0%
! TTGAATTTGTGGAAAATGTA+GGG + chr4_2:41247265-41247284 Msa0600280:intron 25.0%
!!! TAATTTGTTCAATACAGGAT+TGG + chr4_2:41247413-41247432 Msa0600280:intron 25.0%
!! AATTTGTTCAATACAGGATT+GGG + chr4_2:41247414-41247433 Msa0600280:intron 25.0%
! TGTCAATTGCAACAATAAAA+TGG - chr4_2:41247734-41247753 None:intergenic 25.0%
!! GCAATATTTATCAAGTTGTT+TGG + chr4_2:41247754-41247773 Msa0600280:CDS 25.0%
! TTAAATGGAAATTATGAGTG+TGG + chr4_2:41247793-41247812 Msa0600280:CDS 25.0%
!! TATTTGAAACGGGTAAATTT+GGG + chr4_2:41247878-41247897 Msa0600280:CDS 25.0%
!! TTTTTGTATGTCTAAGTAGA+AGG + chr4_2:41247944-41247963 Msa0600280:CDS 25.0%
! TTTTTGTATGCACGTGTATA+CGG - chr4_2:41242477-41242496 None:intergenic 30.0%
GGTACAAACACAATTACAAA+AGG + chr4_2:41242563-41242582 Msa0600280:CDS 30.0%
AGTTGTTCACATACATAACA+CGG - chr4_2:41242636-41242655 None:intergenic 30.0%
CTGTTATAATAGTTATCGGA+GGG - chr4_2:41242895-41242914 None:intergenic 30.0%
TCTGTTATAATAGTTATCGG+AGG - chr4_2:41242896-41242915 None:intergenic 30.0%
TACAATGCATAACATATGCA+AGG + chr4_2:41243158-41243177 Msa0600280:intron 30.0%
GCAAAAATGTGAGAAATTGA+GGG - chr4_2:41243314-41243333 None:intergenic 30.0%
AGCAAAAATGTGAGAAATTG+AGG - chr4_2:41243315-41243334 None:intergenic 30.0%
! GCTATATTTTGTTCCCAATT+TGG + chr4_2:41243332-41243351 Msa0600280:intron 30.0%
TAGAGCAAAAATACCACTTT+GGG - chr4_2:41243389-41243408 None:intergenic 30.0%
TTAGAGCAAAAATACCACTT+TGG - chr4_2:41243390-41243409 None:intergenic 30.0%
! GTGATTTTTAAACCCTAAAG+TGG - chr4_2:41243475-41243494 None:intergenic 30.0%
!!! AATTTTTTGGGTCAAAACAC+AGG + chr4_2:41243495-41243514 Msa0600280:intron 30.0%
TTGCAAGAAATTGAAGTCAT+TGG + chr4_2:41243613-41243632 Msa0600280:intron 30.0%
TGCAAGAAATTGAAGTCATT+GGG + chr4_2:41243614-41243633 Msa0600280:intron 30.0%
ACAAACATAATTGATGAGTG+TGG + chr4_2:41243643-41243662 Msa0600280:intron 30.0%
! CTTTTTAACAGTGATAGACA+TGG + chr4_2:41243836-41243855 Msa0600280:intron 30.0%
ACAGTGTTTATTGTGATGAT+TGG - chr4_2:41243946-41243965 None:intergenic 30.0%
ACAAGAATGGTTACAAATGA+AGG + chr4_2:41244182-41244201 Msa0600280:CDS 30.0%
! AAAAACCGTTTGACATTTTG+TGG - chr4_2:41244316-41244335 None:intergenic 30.0%
! CAGTTTTCTCAAATACTAAC+AGG + chr4_2:41244431-41244450 Msa0600280:CDS 30.0%
!! TAATTTTGATCGAACGACTA+CGG - chr4_2:41244536-41244555 None:intergenic 30.0%
CTTACATGATGCTAATTAGA+TGG + chr4_2:41244902-41244921 Msa0600280:intron 30.0%
!! CCTTTTTAAGGAGAATAAGT+TGG - chr4_2:41245109-41245128 None:intergenic 30.0%
CCAACTTATTCTCCTTAAAA+AGG + chr4_2:41245106-41245125 Msa0600280:intron 30.0%
!!! TTTTTGGTTATATAGCCAAG+TGG - chr4_2:41245143-41245162 None:intergenic 30.0%
! TAGACATGTTTTCTTTTGAC+AGG - chr4_2:41245321-41245340 None:intergenic 30.0%
TATATGGGAGAACAAAGAAA+TGG + chr4_2:41245380-41245399 Msa0600280:CDS 30.0%
CTAGATATGTAGATCAAATG+TGG - chr4_2:41245420-41245439 None:intergenic 30.0%
TTATTCAGACAAGAATCTCT+GGG + chr4_2:41245582-41245601 Msa0600280:intron 30.0%
AAGGCATGCATAACAATATT+TGG - chr4_2:41245665-41245684 None:intergenic 30.0%
! ATTGCCATTTGATTTCCAAA+AGG - chr4_2:41245773-41245792 None:intergenic 30.0%
TAATGTAAACTACAGTACCT+TGG + chr4_2:41245935-41245954 Msa0600280:intron 30.0%
!! AACATTGGTTTGAGAGTTTA+GGG - chr4_2:41246135-41246154 None:intergenic 30.0%
AGGAAACAACTTATGTAAAG+TGG + chr4_2:41246157-41246176 Msa0600280:intron 30.0%
! ACAAAAATTTGGAGCTTCAA+AGG + chr4_2:41246187-41246206 Msa0600280:CDS 30.0%
ATCAATATCACTAGCTGAAT+AGG - chr4_2:41246252-41246271 None:intergenic 30.0%
GCTTCTTATGGATATGAATA+CGG + chr4_2:41246305-41246324 Msa0600280:CDS 30.0%
!!! TTTTGTTTTGTTTGCTTGCT+CGG + chr4_2:41246398-41246417 Msa0600280:intron 30.0%
!! ATCTTGTTGGAATTTTAGGT+GGG + chr4_2:41246460-41246479 Msa0600280:intron 30.0%
ATGACAGAAGATATACTAAC+TGG + chr4_2:41246499-41246518 Msa0600280:CDS 30.0%
TGACAGAAGATATACTAACT+GGG + chr4_2:41246500-41246519 Msa0600280:CDS 30.0%
TTATATGTGGATCATGAACT+GGG + chr4_2:41246726-41246745 Msa0600280:CDS 30.0%
! AATAATATTGCTGTTAGCGA+AGG - chr4_2:41246865-41246884 None:intergenic 30.0%
TAGTGTTCATGTATGTATGT+CGG + chr4_2:41247053-41247072 Msa0600280:intron 30.0%
ATTTGTTCAATACAGGATTG+GGG + chr4_2:41247415-41247434 Msa0600280:intron 30.0%
AGAATAACATCTATGAATGC+TGG + chr4_2:41247547-41247566 Msa0600280:CDS 30.0%
ACTGTTCTACTCAAATTGTT+AGG + chr4_2:41247586-41247605 Msa0600280:CDS 30.0%
TTTCAGCCACAAAGTTTAAA+TGG + chr4_2:41247778-41247797 Msa0600280:CDS 30.0%
TCAAATAGTCCTCTCAAAAA+TGG - chr4_2:41247865-41247884 None:intergenic 30.0%
TTTGAGAGGACTATTTGAAA+CGG + chr4_2:41247867-41247886 Msa0600280:CDS 30.0%
! CTATTTGAAACGGGTAAATT+TGG + chr4_2:41247877-41247896 Msa0600280:CDS 30.0%
ATCACCTTAGCTAAGATCAA+TGG + chr4_2:41242504-41242523 Msa0600280:exon 35.0%
TGAACAACTACTCTATTCCT+TGG + chr4_2:41242647-41242666 Msa0600280:CDS 35.0%
CAACTCAAAGCAATAAACCA+AGG - chr4_2:41242667-41242686 None:intergenic 35.0%
AAACATGGTTCACCTTATCT+TGG + chr4_2:41242689-41242708 Msa0600280:CDS 35.0%
GATGGTGAAAATCCAAGATA+AGG - chr4_2:41242704-41242723 None:intergenic 35.0%
CAATAGTCAAATACCTTTGG+AGG - chr4_2:41242774-41242793 None:intergenic 35.0%
TGCATAACATATGCAAGGTT+CGG + chr4_2:41243163-41243182 Msa0600280:intron 35.0%
TAACACTTAAAGCCTGTGTT+CGG - chr4_2:41243199-41243218 None:intergenic 35.0%
TTGGGTGAAAAGACCAAATT+GGG - chr4_2:41243348-41243367 None:intergenic 35.0%
TTTGGGTGAAAAGACCAAAT+TGG - chr4_2:41243349-41243368 None:intergenic 35.0%
! AATGATTTTTGACCCCAAAG+TGG + chr4_2:41243373-41243392 Msa0600280:intron 35.0%
AGAGCAAAAATACCACTTTG+GGG - chr4_2:41243388-41243407 None:intergenic 35.0%
! AACCCTAAAGTGGGAATTTT+CGG - chr4_2:41243465-41243484 None:intergenic 35.0%
GTGTTTATTGTGATGATTGG+TGG - chr4_2:41243943-41243962 None:intergenic 35.0%
! TGAAGAGCATAGAAGATTAG+AGG - chr4_2:41244039-41244058 None:intergenic 35.0%
TTGTCTGAATTCTTGGTCAT+TGG - chr4_2:41244166-41244185 None:intergenic 35.0%
ACCAAGAATTCAGACAAGAA+TGG + chr4_2:41244169-41244188 Msa0600280:CDS 35.0%
ACCATTCTTGTCTGAATTCT+TGG - chr4_2:41244173-41244192 None:intergenic 35.0%
TCTGACCACAAAATGTCAAA+CGG + chr4_2:41244308-41244327 Msa0600280:intron 35.0%
CATACATATCCTGTCAACAA+GGG - chr4_2:41244345-41244364 None:intergenic 35.0%
TCATACATATCCTGTCAACA+AGG - chr4_2:41244346-41244365 None:intergenic 35.0%
TCTTAGCCGTAAAATAGATG+TGG + chr4_2:41244369-41244388 Msa0600280:CDS 35.0%
! TTGGGTCCACATCTATTTTA+CGG - chr4_2:41244378-41244397 None:intergenic 35.0%
! GTAAGCTTGGGATAGATTTT+GGG - chr4_2:41244396-41244415 None:intergenic 35.0%
! AGTAAGCTTGGGATAGATTT+TGG - chr4_2:41244397-41244416 None:intergenic 35.0%
AAATCATCCAGCCATAATCA+AGG + chr4_2:41244456-41244475 Msa0600280:CDS 35.0%
CACAAACAGTACCTTGATTA+TGG - chr4_2:41244470-41244489 None:intergenic 35.0%
!! CATAATCAAGGTACTGTTTG+TGG + chr4_2:41244468-41244487 Msa0600280:intron 35.0%
TATTCATGAATTCGGAACGT+TGG - chr4_2:41244650-41244669 None:intergenic 35.0%
! CGAAGGGTTTGTTTCAATAT+TGG - chr4_2:41244747-41244766 None:intergenic 35.0%
ATGATGCTAATTAGATGGCA+TGG + chr4_2:41244907-41244926 Msa0600280:intron 35.0%
TGTCAATTGAGCTAAACTCA+CGG - chr4_2:41245038-41245057 None:intergenic 35.0%
! GCTCGAAATTCTCCTTTTTA+AGG - chr4_2:41245121-41245140 None:intergenic 35.0%
TACTTGCAAAAACTTTGCAC+AGG + chr4_2:41245255-41245274 Msa0600280:intron 35.0%
GCTCACTTCCTGAATTTATA+AGG + chr4_2:41245356-41245375 Msa0600280:intron 35.0%
AACAAAGAAATGGCTGAAGA+TGG + chr4_2:41245390-41245409 Msa0600280:CDS 35.0%
TCTACATATCTAGAGAGAAG+AGG + chr4_2:41245427-41245446 Msa0600280:CDS 35.0%
TTGAAATGATGTGGTTGCTT+TGG - chr4_2:41245453-41245472 None:intergenic 35.0%
GTTATTCAGACAAGAATCTC+TGG + chr4_2:41245581-41245600 Msa0600280:intron 35.0%
AGTGTAGCATAGAATTGTTG+GGG - chr4_2:41245740-41245759 None:intergenic 35.0%
GAGTGTAGCATAGAATTGTT+GGG - chr4_2:41245741-41245760 None:intergenic 35.0%
TGAGTGTAGCATAGAATTGT+TGG - chr4_2:41245742-41245761 None:intergenic 35.0%
!! CGATCCTTTTGGAAATCAAA+TGG + chr4_2:41245766-41245785 Msa0600280:CDS 35.0%
AGTTATTTATGGTCTCTCTC+CGG + chr4_2:41246021-41246040 Msa0600280:CDS 35.0%
!! CAACATTGGTTTGAGAGTTT+AGG - chr4_2:41246136-41246155 None:intergenic 35.0%
! TAAGTTGTTTCCTGCAACAT+TGG - chr4_2:41246150-41246169 None:intergenic 35.0%
GAAATCAGTTAGTCATGCTT+TGG + chr4_2:41246217-41246236 Msa0600280:CDS 35.0%
!! TTAGTCATGCTTTGGAAGAT+AGG + chr4_2:41246225-41246244 Msa0600280:CDS 35.0%
TGATGTTAACAAAGCTGTTG+AGG + chr4_2:41246268-41246287 Msa0600280:CDS 35.0%
! GATCTTGTTGGAATTTTAGG+TGG + chr4_2:41246459-41246478 Msa0600280:intron 35.0%
TGACGATACACAAAAAAGGT+TGG + chr4_2:41246524-41246543 Msa0600280:CDS 35.0%
TATGGCTCAACATAAGAGAT+GGG + chr4_2:41246615-41246634 Msa0600280:CDS 35.0%
GGCAATTCTTAGCTTATATG+TGG + chr4_2:41246713-41246732 Msa0600280:CDS 35.0%
CTTATATGTGGATCATGAAC+TGG + chr4_2:41246725-41246744 Msa0600280:CDS 35.0%
TATATGTGGATCATGAACTG+GGG + chr4_2:41246727-41246746 Msa0600280:CDS 35.0%
! TGGTAATGATGCAATATGCA+AGG - chr4_2:41246789-41246808 None:intergenic 35.0%
CACATGTTTAAGTGTGATGT+TGG - chr4_2:41246962-41246981 None:intergenic 35.0%
GTAAAATTGATCTGCAGAGT+TGG - chr4_2:41247352-41247371 None:intergenic 35.0%
TGCTTTAATTGACAATCCTG+AGG - chr4_2:41247503-41247522 None:intergenic 35.0%
CAGGATTGTCAATTAAAGCA+TGG + chr4_2:41247503-41247522 Msa0600280:CDS 35.0%
GATTGTCAATTAAAGCATGG+TGG + chr4_2:41247506-41247525 Msa0600280:CDS 35.0%
AACAATAAAATGGCAGTTCC+TGG - chr4_2:41247724-41247743 None:intergenic 35.0%
TGGAAATTATGAGTGTGGTT+TGG + chr4_2:41247798-41247817 Msa0600280:CDS 35.0%
!!! TGTTATTGGCCATTTTTGAG+AGG + chr4_2:41247853-41247872 Msa0600280:CDS 35.0%
! TTGAGAGGACTATTTGAAAC+GGG + chr4_2:41247868-41247887 Msa0600280:CDS 35.0%
CCTTTGCATATTGTAGACAA+AGG - chr4_2:41247907-41247926 None:intergenic 35.0%
CCTTTGTCTACAATATGCAA+AGG + chr4_2:41247904-41247923 Msa0600280:CDS 35.0%
CTAAGTAGAAGGACAATTTC+TGG + chr4_2:41247955-41247974 Msa0600280:CDS 35.0%
TTGGCCATTGATCTTAGCTA+AGG - chr4_2:41242511-41242530 None:intergenic 40.0%
CATAGAGTGGAAGAGAGTTT+GGG - chr4_2:41242534-41242553 None:intergenic 40.0%
TCATAGAGTGGAAGAGAGTT+TGG - chr4_2:41242535-41242554 None:intergenic 40.0%
!!! ATCCTCCTTTTGTTGTTGCT+TGG + chr4_2:41242607-41242626 Msa0600280:CDS 40.0%
AACCAAGCAACAACAAAAGG+AGG - chr4_2:41242612-41242631 None:intergenic 40.0%
GGTAACCAAGCAACAACAAA+AGG - chr4_2:41242615-41242634 None:intergenic 40.0%
!! TTGCTTTGAGTTGCGAAACA+TGG + chr4_2:41242674-41242693 Msa0600280:CDS 40.0%
! TTTTCACCATCTCCACTCAA+TGG + chr4_2:41242713-41242732 Msa0600280:CDS 40.0%
!!! GTCAGGGTTGGTTTTGATAA+AGG - chr4_2:41242746-41242765 None:intergenic 40.0%
! TCAAATACCTTTGGAGGAGA+CGG - chr4_2:41242768-41242787 None:intergenic 40.0%
TGCATTGTACCTATCAACTG+AGG - chr4_2:41243147-41243166 None:intergenic 40.0%
GCATAACATATGCAAGGTTC+GGG + chr4_2:41243164-41243183 Msa0600280:intron 40.0%
AACACTTAAAGCCTGTGTTC+GGG - chr4_2:41243198-41243217 None:intergenic 40.0%
GACCGAAAATTCCCACTTTA+GGG + chr4_2:41243460-41243479 Msa0600280:intron 40.0%
TTTGGGTCAAAACACAGGTT+AGG + chr4_2:41243500-41243519 Msa0600280:intron 40.0%
GTCACAAATATATCCACTGC+TGG - chr4_2:41243898-41243917 None:intergenic 40.0%
! TAACAAGCTAGCTTGTGAGA+TGG - chr4_2:41243994-41244013 None:intergenic 40.0%
! GCTTGTTACGTTTCTGATGA+TGG + chr4_2:41244006-41244025 Msa0600280:CDS 40.0%
! TTTGTTTCTCCCTTGTTGAC+AGG + chr4_2:41244333-41244352 Msa0600280:intron 40.0%
TCTATCCCAAGCTTACTTGA+AGG + chr4_2:41244400-41244419 Msa0600280:CDS 40.0%
ACTCTCCTTCAAGTAAGCTT+GGG - chr4_2:41244408-41244427 None:intergenic 40.0%
AACTCTCCTTCAAGTAAGCT+TGG - chr4_2:41244409-41244428 None:intergenic 40.0%
AACAGTACCTTGATTATGGC+TGG - chr4_2:41244466-41244485 None:intergenic 40.0%
! AGAATAAGTTGGGTGTCCAA+GGG - chr4_2:41245098-41245117 None:intergenic 40.0%
CAACCACATCATTTCAAAGC+CGG + chr4_2:41245456-41245475 Msa0600280:CDS 40.0%
TACCAACACATTCATAGCAC+CGG - chr4_2:41245478-41245497 None:intergenic 40.0%
! TGCATTTTGCTTGACTCCAA+AGG + chr4_2:41245686-41245705 Msa0600280:CDS 40.0%
! GCATTTTGCTTGACTCCAAA+GGG + chr4_2:41245687-41245706 Msa0600280:CDS 40.0%
! CATTTTGCTTGACTCCAAAG+GGG + chr4_2:41245688-41245707 Msa0600280:CDS 40.0%
! AGCTACTTCTTTTTCCCCTT+TGG - chr4_2:41245705-41245724 None:intergenic 40.0%
! ACACTCAAAGACGATCCTTT+TGG + chr4_2:41245755-41245774 Msa0600280:CDS 40.0%
AACTCTCAAACCAATGTTGC+AGG + chr4_2:41246137-41246156 Msa0600280:intron 40.0%
GCTATCGAAGTTGCTTCTTA+TGG + chr4_2:41246293-41246312 Msa0600280:CDS 40.0%
TATGGATATGAATACGGCAC+TGG + chr4_2:41246311-41246330 Msa0600280:CDS 40.0%
!! TGTTGGAATTTTAGGTGGGT+TGG + chr4_2:41246464-41246483 Msa0600280:intron 40.0%
!!! TTTTAGGTGGGTTGGATGTA+TGG + chr4_2:41246472-41246491 Msa0600280:intron 40.0%
TTATGTTGAGCCATACAGGT+GGG - chr4_2:41246610-41246629 None:intergenic 40.0%
TCTCTTATGTTGAGCCATAC+AGG - chr4_2:41246614-41246633 None:intergenic 40.0%
GTATGGCTCAACATAAGAGA+TGG + chr4_2:41246614-41246633 Msa0600280:CDS 40.0%
CCAAAAACGGCAGCAAAAAT+AGG - chr4_2:41246679-41246698 None:intergenic 40.0%
!!! CCTATTTTTGCTGCCGTTTT+TGG + chr4_2:41246676-41246695 Msa0600280:CDS 40.0%
GCATAACATACTTGAGCAAC+TGG - chr4_2:41246760-41246779 None:intergenic 40.0%
!! TGTTTTTCAATGCTCACCTC+TGG - chr4_2:41246826-41246845 None:intergenic 40.0%
TGCTGTTAGCGAAGGAAAAA+TGG - chr4_2:41246857-41246876 None:intergenic 40.0%
CTATACGAATATTTGGCCTC+AGG + chr4_2:41247484-41247503 Msa0600280:CDS 40.0%
! AAGCATGGTGGAACAATCAA+AGG + chr4_2:41247518-41247537 Msa0600280:CDS 40.0%
TCTATGAATGCTGGATTCTG+TGG + chr4_2:41247556-41247575 Msa0600280:CDS 40.0%
GATCGACATGATAAGAATGC+CGG + chr4_2:41247664-41247683 Msa0600280:CDS 40.0%
! CTCGTTGAAAGTGTATCTAC+CGG - chr4_2:41247686-41247705 None:intergenic 40.0%
TGCACTTGTGGATTCTTGTT+TGG + chr4_2:41248134-41248153 Msa0600280:three_prime_UTR 40.0%
! GCACTTGTGGATTCTTGTTT+GGG + chr4_2:41248135-41248154 Msa0600280:three_prime_UTR 40.0%
! TTGTGGATTCTTGTTTGGGA+TGG + chr4_2:41248139-41248158 Msa0600280:three_prime_UTR 40.0%
! TGTGGATTCTTGTTTGGGAT+GGG + chr4_2:41248140-41248159 Msa0600280:three_prime_UTR 40.0%
TTGTATGCACGTGTATACGG+TGG - chr4_2:41242474-41242493 None:intergenic 45.0%
!!! GGGTTGGTTTTGATAAAGGC+TGG - chr4_2:41242742-41242761 None:intergenic 45.0%
GTGAGCTTACCTCAGTTGAT+AGG + chr4_2:41243135-41243154 Msa0600280:intron 45.0%
ACACTTAAAGCCTGTGTTCG+GGG - chr4_2:41243197-41243216 None:intergenic 45.0%
GGACCGAAAATTCCCACTTT+AGG + chr4_2:41243459-41243478 Msa0600280:intron 45.0%
!! TCAAGGTACTGTTTGTGGTC+CGG + chr4_2:41244473-41244492 Msa0600280:intron 45.0%
TTCAAATGCGCGAATGTGTG+TGG - chr4_2:41244509-41244528 None:intergenic 45.0%
! GAGAATAAGTTGGGTGTCCA+AGG - chr4_2:41245099-41245118 None:intergenic 45.0%
AAGGAGAATTTCGAGCCACT+TGG + chr4_2:41245125-41245144 Msa0600280:intron 45.0%
! GTTCAACATGAAGGGTGCAT+TGG - chr4_2:41245615-41245634 None:intergenic 45.0%
CAGTCCACGTTCAACATGAA+GGG - chr4_2:41245623-41245642 None:intergenic 45.0%
ACAGTCCACGTTCAACATGA+AGG - chr4_2:41245624-41245643 None:intergenic 45.0%
GGAGTCAAGCAAAATGCACA+AGG - chr4_2:41245684-41245703 None:intergenic 45.0%
AAACTACAGTACCTTGGAGC+AGG + chr4_2:41245941-41245960 Msa0600280:intron 45.0%
GGACTCCAAGGAATGTTCTA+CGG + chr4_2:41245971-41245990 Msa0600280:CDS 45.0%
TTCCTCCGTAGAACATTCCT+TGG - chr4_2:41245979-41245998 None:intergenic 45.0%
TCTCCGGATGACGTAGAAAA+GGG + chr4_2:41246037-41246056 Msa0600280:CDS 45.0%
! GTACCCTTTTCTACGTCATC+CGG - chr4_2:41246043-41246062 None:intergenic 45.0%
!! ATATGAATACGGCACTGGCT+GGG + chr4_2:41246316-41246335 Msa0600280:CDS 45.0%
GGGCTGACGATACACAAAAA+AGG + chr4_2:41246520-41246539 Msa0600280:CDS 45.0%
AATTGGAGCACAACCTGTGA+AGG - chr4_2:41246581-41246600 None:intergenic 45.0%
ACAGGTTGTGCTCCAATTGA+TGG + chr4_2:41246583-41246602 Msa0600280:CDS 45.0%
TATGTTGAGCCATACAGGTG+GGG - chr4_2:41246609-41246628 None:intergenic 45.0%
CTTATGTTGAGCCATACAGG+TGG - chr4_2:41246611-41246630 None:intergenic 45.0%
GAAGATCTCAAGCATTCCTG+TGG - chr4_2:41246641-41246660 None:intergenic 45.0%
TGGATCATGAACTGGGGATT+TGG + chr4_2:41246733-41246752 Msa0600280:CDS 45.0%
AGAAAGATCTTCCTCCCTCT+AGG + chr4_2:41247638-41247657 Msa0600280:CDS 45.0%
GAAAGATCTTCCTCCCTCTA+GGG + chr4_2:41247639-41247658 Msa0600280:CDS 45.0%
TCATGTCGATCATCCCTAGA+GGG - chr4_2:41247655-41247674 None:intergenic 45.0%
ATCATGTCGATCATCCCTAG+AGG - chr4_2:41247656-41247675 None:intergenic 45.0%
!!! GAGTCGTTAGTTTTCTTGCC+AGG + chr4_2:41247703-41247722 Msa0600280:CDS 45.0%
CTTGGACAAGTGCTACACTT+TGG - chr4_2:41248103-41248122 None:intergenic 45.0%
!! AAGAAAATAAATTATTAATT+AGG - chr4_2:41242853-41242872 None:intergenic 5.0%
!!! TTTATTTTTTAATATAAGAA+AGG + chr4_2:41244217-41244236 Msa0600280:intron 5.0%
!!! ACTTTTTTTTTTTTTTTTTA+AGG - chr4_2:41244707-41244726 None:intergenic 5.0%
GAGTGGAAGAGAGTTTGGGT+TGG - chr4_2:41242530-41242549 None:intergenic 50.0%
TGGACTCCATTGAGTGGAGA+TGG - chr4_2:41242722-41242741 None:intergenic 50.0%
AAAGGCTGGACTCCATTGAG+TGG - chr4_2:41242728-41242747 None:intergenic 50.0%
TGTGCAAGAACTTCCAGCAG+TGG + chr4_2:41243882-41243901 Msa0600280:CDS 50.0%
TGTGTGTGGTTCCTAACAGC+CGG - chr4_2:41244495-41244514 None:intergenic 50.0%
AGAGGTTGTGATTCGACCCT+TGG + chr4_2:41245079-41245098 Msa0600280:intron 50.0%
!! GCACCGGCTTTGAAATGATG+TGG - chr4_2:41245462-41245481 None:intergenic 50.0%
!! AGCCGGTGCTATGAATGTGT+TGG + chr4_2:41245473-41245492 Msa0600280:CDS 50.0%
TGCACCCTTCATGTTGAACG+TGG + chr4_2:41245616-41245635 Msa0600280:CDS 50.0%
! TACCTTGGAGCAGGATTAGC+AGG + chr4_2:41245950-41245969 Msa0600280:CDS 50.0%
CTCCAAGGAATGTTCTACGG+AGG + chr4_2:41245974-41245993 Msa0600280:CDS 50.0%
CTCTCCGGATGACGTAGAAA+AGG + chr4_2:41246036-41246055 Msa0600280:CDS 50.0%
!! GATATGAATACGGCACTGGC+TGG + chr4_2:41246315-41246334 Msa0600280:CDS 50.0%
!! TATGAATACGGCACTGGCTG+GGG + chr4_2:41246317-41246336 Msa0600280:CDS 50.0%
!! CCTGTGAAGGCTATTGGTTC+TGG - chr4_2:41246568-41246587 None:intergenic 50.0%
CCAGAACCAATAGCCTTCAC+AGG + chr4_2:41246565-41246584 Msa0600280:CDS 50.0%
GCACAACCTGTGAAGGCTAT+TGG - chr4_2:41246574-41246593 None:intergenic 50.0%
ATACAGGTGGGGCCATCAAT+TGG - chr4_2:41246598-41246617 None:intergenic 50.0%
! AATTGATGGCCCCACCTGTA+TGG + chr4_2:41246597-41246616 Msa0600280:CDS 50.0%
CAACATAAGAGATGGGCCAC+AGG + chr4_2:41246622-41246641 Msa0600280:CDS 50.0%
CTCTGGCAGGAAATAGGAGT+TGG - chr4_2:41246809-41246828 None:intergenic 50.0%
CAACTCCTATTTCCTGCCAG+AGG + chr4_2:41246807-41246826 Msa0600280:CDS 50.0%
TTTCAATGCTCACCTCTGGC+AGG - chr4_2:41246822-41246841 None:intergenic 50.0%
AAGTGCAGTGCTTGCAGTCT+TGG - chr4_2:41248121-41248140 None:intergenic 50.0%
TGCACGTGTATACGGTGGTG+AGG - chr4_2:41242469-41242488 None:intergenic 55.0%
! ACCTTTGGAGGAGACGGTCA+GGG - chr4_2:41242762-41242781 None:intergenic 55.0%
! TACCTTTGGAGGAGACGGTC+AGG - chr4_2:41242763-41242782 None:intergenic 55.0%
CTGTTTGTGGTCCGGCTGTT+AGG + chr4_2:41244481-41244500 Msa0600280:intron 55.0%
GTCCTGCTAATCCTGCTCCA+AGG - chr4_2:41245955-41245974 None:intergenic 55.0%
! GCAGGATTAGCAGGACTCCA+AGG + chr4_2:41245959-41245978 Msa0600280:CDS 55.0%
GGTGCGACTTGCAGATGTAG+CGG + chr4_2:41246419-41246438 Msa0600280:intron 55.0%
GCTCACCTCTGGCAGGAAAT+AGG - chr4_2:41246815-41246834 None:intergenic 55.0%
TGTCGATCATCCCTAGAGGG+AGG - chr4_2:41247652-41247671 None:intergenic 55.0%
! GACTGCAAGCACTGCACTTG+TGG + chr4_2:41248122-41248141 Msa0600280:three_prime_UTR 55.0%
TTGGAGGAGACGGTCAGGGT+TGG - chr4_2:41242758-41242777 None:intergenic 60.0%
ACCCTGACCGTCTCCTCCAA+AGG + chr4_2:41242758-41242777 Msa0600280:CDS 60.0%
GGGATTCGAACCCCGAACAC+AGG + chr4_2:41243184-41243203 Msa0600280:intron 60.0%
!! CGGCACTGGCTGGGGTAAAC+AGG + chr4_2:41246325-41246344 Msa0600280:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 41242464 41248178 41242464 ID=Msa0600280;Name=Msa0600280
chr4_2 mRNA 41242464 41248178 41242464 ID=Msa0600280-mRNA-1;Parent=Msa0600280;Name=Msa0600280-mRNA-1;_AED=0.15;_eAED=0.15;_QI=59|1|1|1|1|1|9|197|743
chr4_2 exon 41242464 41242779 41242464 ID=Msa0600280-mRNA-1:exon:8989;Parent=Msa0600280-mRNA-1
chr4_2 exon 41243882 41244203 41243882 ID=Msa0600280-mRNA-1:exon:8990;Parent=Msa0600280-mRNA-1
chr4_2 exon 41244355 41244477 41244355 ID=Msa0600280-mRNA-1:exon:8991;Parent=Msa0600280-mRNA-1
chr4_2 exon 41245378 41245494 41245378 ID=Msa0600280-mRNA-1:exon:8992;Parent=Msa0600280-mRNA-1
chr4_2 exon 41245590 41245802 41245590 ID=Msa0600280-mRNA-1:exon:8993;Parent=Msa0600280-mRNA-1
chr4_2 exon 41245950 41246058 41245950 ID=Msa0600280-mRNA-1:exon:8994;Parent=Msa0600280-mRNA-1
chr4_2 exon 41246159 41246346 41246159 ID=Msa0600280-mRNA-1:exon:8995;Parent=Msa0600280-mRNA-1
chr4_2 exon 41246478 41246828 41246478 ID=Msa0600280-mRNA-1:exon:8996;Parent=Msa0600280-mRNA-1
chr4_2 exon 41247430 41248178 41247430 ID=Msa0600280-mRNA-1:exon:8997;Parent=Msa0600280-mRNA-1
chr4_2 five_prime_UTR 41242464 41242522 41242464 ID=Msa0600280-mRNA-1:five_prime_utr;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41242523 41242779 41242523 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41243882 41244203 41243882 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41244355 41244477 41244355 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41245378 41245494 41245378 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41245590 41245802 41245590 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41245950 41246058 41245950 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41246159 41246346 41246159 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41246478 41246828 41246478 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 CDS 41247430 41247981 41247430 ID=Msa0600280-mRNA-1:cds;Parent=Msa0600280-mRNA-1
chr4_2 three_prime_UTR 41247982 41248178 41247982 ID=Msa0600280-mRNA-1:three_prime_utr;Parent=Msa0600280-mRNA-1
Gene Sequence

>Msa0600280

ATGGCCAACCCAAACTCTCTTCCACTCTATGAAAAATATTGGTACAAACACAATTACAAAAGGGTAATAGATAGCTTGATTTTAATCCTCCTTTTGTTGTTGCTTGGTTACCGTGTTATGTATGTGAACAACTACTCTATTCCTTGGTTTATTGCTTTGAGTTGCGAAACATGGTTCACCTTATCTTGGATTTTCACCATCTCCACTCAATGGAGTCCAGCCTTTATCAAAACCAACCCTGACCGTCTCCTCCAAAGTGTGCAAGAACTTCCAGCAGTGGATATATTTGTGACAACAGCAGATGATGAGCTAGAACCACCAATCATCACAATAAACACTGTTTTATCGTTGTTAGCACTTGATTATCCATCTCACAAGCTAGCTTGTTACGTTTCTGATGATGGTTGTTCTCCTCTAATCTTCTATGCTCTTCACAAAGCTTCAAAATTTGCAAAACATTGGGTACCATTTTGTAAAAAGTACAATGTGCAAATTAGGGCTCCATTTAGATACTTTTGTGATGACAACGAATGCGCGACCAATGACCAAGAATTCAGACAAGAATGGTTACAAATGAAGGATATGTATGAAAATCTTAGCCGTAAAATAGATGTGGACCCAAAATCTATCCCAAGCTTACTTGAAGGAGAGTTTGCAGTTTTCTCAAATACTAACAGGACAAATCATCCAGCCATAATCAAGGTTATATGGGAGAACAAAGAAATGGCTGAAGATGGATTGCCACATTTGATCTACATATCTAGAGAGAAGAGGCCAAAGCAACCACATCATTTCAAAGCCGGTGCTATGAATGTGTTGACAAGAATCTCTGGGTTGATTACCAATGCACCCTTCATGTTGAACGTGGACTGTGACATGTTTGTAAACAATCCAAATATTGTTATGCATGCCTTGTGCATTTTGCTTGACTCCAAAGGGGAAAAAGAAGTAGCTTTTGCTCAATGTCCCCAACAATTCTATGCTACACTCAAAGACGATCCTTTTGGAAATCAAATGGCAATTTTGTATAAGTACCTTGGAGCAGGATTAGCAGGACTCCAAGGAATGTTCTACGGAGGAACAAACTGCTTTCATAGAAGAAAAGTTATTTATGGTCTCTCTCCGGATGACGTAGAAAAGGGAAACAACTTATGTAAAGTGGAGTTAAAACAAAAATTTGGAGCTTCAAAGGAACTTATGAAATCAGTTAGTCATGCTTTGGAAGATAGGACCTATTCAGCTAGTGATATTGATGTTAACAAAGCTGTTGAGGAAGCTATCGAAGTTGCTTCTTATGGATATGAATACGGCACTGGCTGGGGTAAACAGGTGGGTTGGATGTATGGAACAATGACAGAAGATATACTAACTGGGCTGACGATACACAAAAAAGGTTGGAGATCAGAATTATGTACACCAGAACCAATAGCCTTCACAGGTTGTGCTCCAATTGATGGCCCCACCTGTATGGCTCAACATAAGAGATGGGCCACAGGAATGCTTGAGATCTTCTTTAGCAAACATTGTCCTATTTTTGCTGCCGTTTTTGGTAAACTTTCTTTTAGGCAATTCTTAGCTTATATGTGGATCATGAACTGGGGATTTGGTCCAGTTGCTCAAGTATGTTATGCTTGTCTCCTTGCATATTGCATCATTACCAACTCCTATTTCCTGCCAGAGGATTGGGGCATATATATTCCTACTGCAATAGTTGGGATTTACAAAGTATATACTCTATACGAATATTTGGCCTCAGGATTGTCAATTAAAGCATGGTGGAACAATCAAAGGATGTCGAGAATAACATCTATGAATGCTGGATTCTGTGGATTTATTACTGTTCTACTCAAATTGTTAGGAATATCTAACACTGTTTTTGACATAACAAAGAAAGATCTTCCTCCCTCTAGGGATGATCGACATGATAAGAATGCCGGTAGATACACTTTCAACGAGTCGTTAGTTTTCTTGCCAGGAACTGCCATTTTATTGTTGCAATTGACAGCAATATTTATCAAGTTGTTTGGATTTCAGCCACAAAGTTTAAATGGAAATTATGAGTGTGGTTTGGCTGAAATGTTGATTAGTGTGTATTTGATCATATGTTATTGGCCATTTTTGAGAGGACTATTTGAAACGGGTAAATTTGGGATTCCTTTGTCTACAATATGCAAAGGAGCAACTTTGACATGTATTTTTGTATGTCTAAGTAGAAGGACAATTTCTGGTTGA
Protein sequence

>Msa0600280

MANPNSLPLYEKYWYKHNYKRVIDSLILILLLLLLGYRVMYVNNYSIPWFIALSCETWFTLSWIFTISTQWSPAFIKTNPDRLLQSVQELPAVDIFVTTADDELEPPIITINTVLSLLALDYPSHKLACYVSDDGCSPLIFYALHKASKFAKHWVPFCKKYNVQIRAPFRYFCDDNECATNDQEFRQEWLQMKDMYENLSRKIDVDPKSIPSLLEGEFAVFSNTNRTNHPAIIKVIWENKEMAEDGLPHLIYISREKRPKQPHHFKAGAMNVLTRISGLITNAPFMLNVDCDMFVNNPNIVMHALCILLDSKGEKEVAFAQCPQQFYATLKDDPFGNQMAILYKYLGAGLAGLQGMFYGGTNCFHRRKVIYGLSPDDVEKGNNLCKVELKQKFGASKELMKSVSHALEDRTYSASDIDVNKAVEEAIEVASYGYEYGTGWGKQVGWMYGTMTEDILTGLTIHKKGWRSELCTPEPIAFTGCAPIDGPTCMAQHKRWATGMLEIFFSKHCPIFAAVFGKLSFRQFLAYMWIMNWGFGPVAQVCYACLLAYCIITNSYFLPEDWGIYIPTAIVGIYKVYTLYEYLASGLSIKAWWNNQRMSRITSMNAGFCGFITVLLKLLGISNTVFDITKKDLPPSRDDRHDKNAGRYTFNESLVFLPGTAILLLQLTAIFIKLFGFQPQSLNGNYECGLAEMLISVYLIICYWPFLRGLFETGKFGIPLSTICKGATLTCIFVCLSRRTISG*