AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0436300


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436300 MtrunA17_Chr3g0133251 98.501 467 7 0 1 467 75 541 0.0 953
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0436300 AT5G49970.1 76.017 467 111 1 1 467 65 530 0.0 761
Msa0436300 AT5G49970.2 74.155 414 95 2 1 414 65 466 0.0 648

Find 146 sgRNAs with CRISPR-Local

Find 538 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTCTGTAGATATTCCTTC+TGG 0.185585 3_2:-89770275 Msa0436300:CDS
CATGAACATTACCTGATTAA+TGG 0.185780 3_2:+89769822 None:intergenic
AACTTCTTTGCACAGAATTT+TGG 0.186628 3_2:+89770039 None:intergenic
CGTAATAATCATAATCAAAT+TGG 0.195978 3_2:-89770317 Msa0436300:CDS
CGTGTTCTTGATTGCCTTGT+TGG 0.221302 3_2:+89771889 None:intergenic
ATGAACATTACCTGATTAAT+GGG 0.239677 3_2:+89769823 None:intergenic
TTTAAAATTGTTAAGAAAGT+TGG 0.244134 3_2:-89771939 Msa0436300:five_prime_UTR
ATTACCCGCAGTTCCGTAAA+TGG 0.255310 3_2:-89769505 Msa0436300:intron
TACGAAAAGAAATAAATCTT+TGG 0.292429 3_2:+89770336 None:intergenic
TCATTGATGGTACATTTATA+TGG 0.297221 3_2:-89771802 Msa0436300:five_prime_UTR
ACTCATCACACTGAATTATC+AGG 0.310827 3_2:+89764846 None:intergenic
GACTGAGTCGGAATCGAAAT+TGG 0.312666 3_2:+89771509 None:intergenic
CACATGGATGTTCCAGGATA+TGG 0.314269 3_2:+89769940 None:intergenic
TCACGGATCGTATTGCTAAA+AGG 0.325277 3_2:-89768642 Msa0436300:CDS
TCACTTTGGTTATAAGCCTT+TGG 0.327823 3_2:-89770944 Msa0436300:CDS
ATGTTTGGATTCTCATTTCA+TGG 0.338142 3_2:-89770674 Msa0436300:intron
ACGCATCATCAAACCATTTA+CGG 0.338547 3_2:+89769492 None:intergenic
ACCTGGTCTTCAAGAAATTC+TGG 0.347595 3_2:+89769856 None:intergenic
TTAAAATTGTTAAGAAAGTT+GGG 0.349337 3_2:-89771938 Msa0436300:five_prime_UTR
CAACAGCTTCTTGTTGTTTG+AGG 0.350405 3_2:+89771481 None:intergenic
CGTTTCAGGGTATTCTTCTC+AGG 0.360589 3_2:-89771583 Msa0436300:intron
CGAAATTGGACATGGTTTAG+AGG 0.366278 3_2:+89771523 None:intergenic
AAATTCTGTGCAAAGAAGTT+TGG 0.367242 3_2:-89770036 Msa0436300:CDS
AACCCAGCATATAGAGGCTT+GGG 0.375181 3_2:+89770901 None:intergenic
ATTCTAGTAGATGCCATGTT+TGG 0.376534 3_2:-89770689 Msa0436300:CDS
CAATCAAGAACACGCGATTC+TGG 0.377899 3_2:-89771880 Msa0436300:five_prime_UTR
GTTGACAAGGCCATAGCATT+TGG 0.383761 3_2:+89769449 None:intergenic
CACCATTTCTAAACAGAATC+AGG 0.395693 3_2:+89764633 None:intergenic
TGGATATGTACCAACATATC+AGG 0.404323 3_2:+89770209 None:intergenic
TTTGAGGAGGCTTTCCAATT+CGG 0.407800 3_2:+89769914 None:intergenic
AAATCATCAAAGGGAGGCCT+TGG 0.412331 3_2:+89770362 None:intergenic
TAACAATGGTGGTGATGGTC+TGG 0.413619 3_2:-89770986 Msa0436300:CDS
CACAAACTATGAAAGTCAAA+AGG 0.420524 3_2:-89768496 Msa0436300:CDS
AGAAATCTCGCTTGCATGAC+AGG 0.429134 3_2:-89765463 Msa0436300:intron
GAAACTCTCATGGGTCCTCT+TGG 0.431182 3_2:-89771450 Msa0436300:CDS
GTAGAAAATGATCGAATTGT+AGG 0.431980 3_2:+89771560 None:intergenic
TACTAGAATGTCAAAGTCCT+TGG 0.435535 3_2:+89770703 None:intergenic
GGAGGCAGACCCCATTAATC+AGG 0.438428 3_2:-89769833 Msa0436300:intron
CTAAAAGGCTTTGACAAGGA+TGG 0.439667 3_2:-89768627 Msa0436300:CDS
GAATTGGTAATGTTGTTGTA+TGG 0.442552 3_2:+89771748 None:intergenic
ATTGTCGATCCCTTTCTTGT+CGG 0.451134 3_2:-89770750 Msa0436300:CDS
CGGACACACATGGATGTTCC+AGG 0.453352 3_2:+89769934 None:intergenic
TACGGAGAAGAATTGAAGAA+AGG 0.456141 3_2:+89771669 None:intergenic
ACATCCATGTGTGTCCGAAT+TGG 0.458514 3_2:-89769928 Msa0436300:CDS
ACGGAGAAGAATTGAAGAAA+GGG 0.459666 3_2:+89771670 None:intergenic
TCTCTGTAGATATTCCTTCT+GGG 0.460526 3_2:-89770274 Msa0436300:CDS
TGAAGAGATGCGTTCATTGA+TGG 0.462899 3_2:-89771815 Msa0436300:five_prime_UTR
GATTGAGATTGCAGTTCCAT+TGG 0.463149 3_2:-89764748 Msa0436300:three_prime_UTR
ATGAATGAGTGATAGTGAAT+TGG 0.474514 3_2:+89771732 None:intergenic
ATTTGTTGACGGATAAGAAA+AGG 0.478197 3_2:-89771912 Msa0436300:five_prime_UTR
CTTATACTTCCACCATATCC+TGG 0.480379 3_2:-89769952 Msa0436300:CDS
GACCTGATTCTGTTTAGAAA+TGG 0.480527 3_2:-89764635 Msa0436300:three_prime_UTR
CTTCAGCGTCGACCAACTCA+TGG 0.481760 3_2:-89771427 Msa0436300:intron
CGTCCTAGAGGTAGTCAGAT+TGG 0.485609 3_2:-89765911 Msa0436300:CDS
GCTTATAACCAAAGTGATGC+AGG 0.486106 3_2:+89770950 None:intergenic
TTTCAATTTCAGGAATTGGC+TGG 0.487134 3_2:-89771332 Msa0436300:intron
TACGTTCCCCATGAGATAGA+TGG 0.495915 3_2:-89764901 Msa0436300:CDS
TTGGGATGGTTTAAACCGAC+AGG 0.496012 3_2:-89768430 Msa0436300:intron
TTCTGTGCAAAGAAGTTTGG+CGG 0.497061 3_2:-89770033 Msa0436300:CDS
AAGTTGGGTAAATTTGTTGA+CGG 0.501052 3_2:-89771923 Msa0436300:five_prime_UTR
TAGAGAAATAATAATAATTG+TGG 0.502102 3_2:+89771707 None:intergenic
AGATCTTCCACCGACAAGAA+AGG 0.505249 3_2:+89770740 None:intergenic
TTCTGGGTGGCATGTTGAAG+AGG 0.505414 3_2:-89770258 Msa0436300:CDS
GTTGAAGAGGGAGATGTTGA+TGG 0.505649 3_2:-89770245 Msa0436300:CDS
GCCCGTCACCTGCATCACTT+TGG 0.506219 3_2:-89770958 Msa0436300:CDS
AGGAATTAAACCTGATATGT+TGG 0.509098 3_2:-89770219 Msa0436300:intron
TAACCCAGCATATAGAGGCT+TGG 0.510047 3_2:+89770900 None:intergenic
CGTCGCTACTTCCATATATG+AGG 0.510638 3_2:-89771303 Msa0436300:intron
ATATCTACAGAGACTATAAC+CGG 0.511564 3_2:+89770284 None:intergenic
ATATGCTGGGTTAGTTACTC+AGG 0.512302 3_2:-89770890 Msa0436300:intron
TAATGGGGTCTGCCTCCACC+TGG 0.513228 3_2:+89769839 None:intergenic
TTTAGAGGAAGAAGTGATTG+TGG 0.513386 3_2:+89771538 None:intergenic
GTCGATCCCTTTCTTGTCGG+TGG 0.513702 3_2:-89770747 Msa0436300:CDS
CTAATTGTCCAGGTTCTCCA+AGG 0.520404 3_2:-89770379 Msa0436300:intron
CCTGGTAACAATGGTGGTGA+TGG 0.521724 3_2:-89770991 Msa0436300:CDS
GAGGGAGATGTTGATGGCAC+AGG 0.521926 3_2:-89770239 Msa0436300:CDS
TTGTCAACTGTAGGAAAGGA+TGG 0.523925 3_2:-89769434 Msa0436300:CDS
CATTAGAGTTCTGTAGTGCC+TGG 0.524573 3_2:-89765796 Msa0436300:intron
GATCTTCCACCGACAAGAAA+GGG 0.524841 3_2:+89770741 None:intergenic
ACCAAAGTGATGCAGGTGAC+GGG 0.525452 3_2:+89770957 None:intergenic
TCCAGAATTTCTTGAAGACC+AGG 0.526116 3_2:-89769857 Msa0436300:CDS
GTAACTAACCCAGCATATAG+AGG 0.527504 3_2:+89770895 None:intergenic
GACTACCTCTAGGACGGCTA+TGG 0.527753 3_2:+89765918 None:intergenic
CTTTGGATCAAATCATCAAA+GGG 0.528514 3_2:+89770353 None:intergenic
AATTGGTAATGTTGTTGTAT+GGG 0.528760 3_2:+89771749 None:intergenic
AACCAAAGTGATGCAGGTGA+CGG 0.533269 3_2:+89770956 None:intergenic
GCTATGGAAGGTTGAGCGGT+TGG 0.534952 3_2:-89764872 Msa0436300:CDS
GTTCTTACTATATGTGGTCC+TGG 0.535808 3_2:-89771009 Msa0436300:CDS
CCATCACCACCATTGTTACC+AGG 0.540694 3_2:+89770991 None:intergenic
ACAAACTATGAAAGTCAAAA+GGG 0.541347 3_2:-89768495 Msa0436300:CDS
TGAGATTGATGAAACTCTCA+TGG 0.542247 3_2:-89771460 Msa0436300:CDS
TCGTGAAGGACATGCCTACC+AGG 0.545331 3_2:+89765778 None:intergenic
AGTCGTGTTCTTACTATATG+TGG 0.545920 3_2:-89771015 Msa0436300:CDS
GGCCTTGTCAACTGTAGGAA+AGG 0.550230 3_2:-89769438 Msa0436300:CDS
CTTTCCAATTCGGACACACA+TGG 0.551115 3_2:+89769924 None:intergenic
AATGCGTTGCATTATTCCAA+TGG 0.551836 3_2:+89764732 None:intergenic
TGCGTTGGCTGCGAGTTTGA+AGG 0.554483 3_2:-89769474 Msa0436300:CDS
TGGAGCAATAGTCAGCAAGC+AGG 0.559556 3_2:-89765891 Msa0436300:intron
CTCATCACACTGAATTATCA+GGG 0.561810 3_2:+89764847 None:intergenic
CGGATAAGAAAAGGCCAACA+AGG 0.562450 3_2:-89771903 Msa0436300:five_prime_UTR
ATCCTTTCCTACAGTTGACA+AGG 0.563043 3_2:+89769436 None:intergenic
AGAGCTGAAATATCGATTTG+AGG 0.565098 3_2:+89769898 None:intergenic
CAATGGTGGTGATGGTCTGG+TGG 0.565708 3_2:-89770983 Msa0436300:CDS
GAGAAGAATTGAAGAAAGGG+AGG 0.568457 3_2:+89771673 None:intergenic
AGAACACGACTATACTCGCC+TGG 0.569258 3_2:+89771027 None:intergenic
TGAATCAACAAACCATGAGT+TGG 0.572983 3_2:+89771415 None:intergenic
TCACGAGCAGTACAAAGAGC+TGG 0.573144 3_2:-89765761 Msa0436300:CDS
CGCTTTGGGTAACAGACCAA+AGG 0.576679 3_2:+89770928 None:intergenic
AGAGTTCTGTAGTGCCTGGT+AGG 0.578343 3_2:-89765792 Msa0436300:CDS
ATTGGTAATGTTGTTGTATG+GGG 0.580281 3_2:+89771750 None:intergenic
GTGTGATGAGTTTACCCCAC+CGG 0.580702 3_2:-89764834 Msa0436300:three_prime_UTR
TTTGAAGGAACCAAATGCTA+TGG 0.581375 3_2:-89769459 Msa0436300:CDS
TCTTTGGATCAAATCATCAA+AGG 0.584306 3_2:+89770352 None:intergenic
CAACTGGCTGCAGCTCATCA+CGG 0.584760 3_2:-89768659 Msa0436300:intron
ATTTCTTGAAGACCAGGTGG+AGG 0.597398 3_2:-89769851 Msa0436300:CDS
TAAATGGTTTGATGATGCGT+TGG 0.600021 3_2:-89769489 Msa0436300:CDS
GCTCCAATCTGACTACCTCT+AGG 0.601768 3_2:+89765908 None:intergenic
AAGTCCTTGGAGAAATCTGA+TGG 0.606006 3_2:+89770716 None:intergenic
TCTGGGTGGCATGTTGAAGA+GGG 0.609291 3_2:-89770257 Msa0436300:CDS
TGTTCAGAAAGTTTCTGATG+AGG 0.615330 3_2:-89765957 Msa0436300:CDS
ATGGATGTTCCAGGATATGG+TGG 0.617263 3_2:+89769943 None:intergenic
TCTTCAACATGCCACCCAGA+AGG 0.618781 3_2:+89770260 None:intergenic
ACCCAGCATATAGAGGCTTG+GGG 0.628100 3_2:+89770902 None:intergenic
GCTATGGCCTTGTCAACTGT+AGG 0.630441 3_2:-89769443 Msa0436300:CDS
GTCGGAATCGAAATTGGACA+TGG 0.635523 3_2:+89771515 None:intergenic
GCTGAAATATCGATTTGAGG+AGG 0.636380 3_2:+89769901 None:intergenic
GTTTAGAAATGGTGAGTATG+CGG 0.639164 3_2:-89764624 Msa0436300:three_prime_UTR
CAATCTGACTACCTCTAGGA+CGG 0.639748 3_2:+89765912 None:intergenic
TTTGAGGTAAGTGACTGAGT+CGG 0.651593 3_2:+89771497 None:intergenic
AAAAGCTATGGAAGGTTGAG+CGG 0.651670 3_2:-89764876 Msa0436300:CDS
ATTGCTAAAAGGCTTTGACA+AGG 0.653672 3_2:-89768631 Msa0436300:CDS
TTGACAAGGATGGATTTGTG+TGG 0.659196 3_2:-89768617 Msa0436300:intron
CTGGTAGTAAAATTGAAGTG+TGG 0.660046 3_2:-89771861 Msa0436300:five_prime_UTR
TCTACCATCAGATTTCTCCA+AGG 0.661275 3_2:-89770720 Msa0436300:CDS
AGAATTTCTTGAAGACCAGG+TGG 0.663417 3_2:-89769854 Msa0436300:CDS
CCCAGCATATAGAGGCTTGG+GGG 0.666571 3_2:+89770903 None:intergenic
CTGTAGATATTCCTTCTGGG+TGG 0.670404 3_2:-89770271 Msa0436300:CDS
GCTCTTTGTACTGCTCGTGA+AGG 0.673649 3_2:+89765764 None:intergenic
ATGAAATGAGAATCCAAACA+TGG 0.678723 3_2:+89770676 None:intergenic
ATATGTGGTCCTGGTAACAA+TGG 0.681572 3_2:-89771000 Msa0436300:CDS
TGGATCAAATCATCAAAGGG+AGG 0.684546 3_2:+89770356 None:intergenic
TGGTCGACGCTGAAGCCAAG+AGG 0.686919 3_2:+89771435 None:intergenic
TATTTCCATAGCCGTCCTAG+AGG 0.687448 3_2:-89765923 Msa0436300:CDS
GAGATTGATGAAACTCTCAT+GGG 0.695408 3_2:-89771459 Msa0436300:CDS
TGAACATTACCTGATTAATG+GGG 0.704539 3_2:+89769824 None:intergenic
TGTGGTCCTGGTAACAATGG+TGG 0.732229 3_2:-89770997 Msa0436300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAGAAAGAAAAAA+TGG + chr3_2:89765755-89765774 None:intergenic 10.0%
!! TTATTTGTTTATTTAAACAT+TGG - chr3_2:89766412-89766431 Msa0436300:intron 10.0%
!! ATTTAATGTTAAAATTTCTT+TGG - chr3_2:89768002-89768021 Msa0436300:intron 10.0%
!!! TTTTATTAAAAAAGAAGTTT+CGG - chr3_2:89769520-89769539 Msa0436300:intron 10.0%
!!! AATCTTAATATTTTTAATAG+AGG + chr3_2:89769592-89769611 None:intergenic 10.0%
!! TCTATTAAAAATATTAAGAT+TGG - chr3_2:89769591-89769610 Msa0436300:intron 10.0%
!!! AAAAAACAATTTTATGTATT+CGG + chr3_2:89769709-89769728 None:intergenic 10.0%
!!! AATCAACTAAATATTTTTTT+TGG + chr3_2:89770407-89770426 None:intergenic 10.0%
!!! ATGATTATTTAAAACTTTTT+TGG - chr3_2:89771500-89771519 Msa0436300:CDS 10.0%
!!! TTTAAAATTGTTAAGAAAGT+TGG - chr3_2:89764641-89764660 Msa0436300:three_prime_UTR 15.0%
!! TTAAAATTGTTAAGAAAGTT+GGG - chr3_2:89764642-89764661 Msa0436300:three_prime_UTR 15.0%
!! TAGAGAAATAATAATAATTG+TGG + chr3_2:89764876-89764895 None:intergenic 15.0%
!! TCATGATTGAATTATATTAA+CGG + chr3_2:89765495-89765514 None:intergenic 15.0%
!! CAATTATAAAATAACTAATC+AGG + chr3_2:89767301-89767320 None:intergenic 15.0%
!!! CTGATTAGTTATTTTATAAT+TGG - chr3_2:89767299-89767318 Msa0436300:intron 15.0%
!! AATTAATAATAATACATGGT+CGG + chr3_2:89768462-89768481 None:intergenic 15.0%
!! AATATTAACAGTTATAACTT+CGG - chr3_2:89769073-89769092 Msa0436300:intron 15.0%
!! AGTTGCAAATAATAATAATA+TGG + chr3_2:89770293-89770312 None:intergenic 15.0%
!!! TTTATTGCTTTTTTTTTTCT+AGG - chr3_2:89770584-89770603 Msa0436300:intron 15.0%
!!! ATGACAATTTTTACTTTAAA+AGG - chr3_2:89771341-89771360 Msa0436300:intron 15.0%
!!! AAAAGTTTTAAATAATCATG+AGG + chr3_2:89771499-89771518 None:intergenic 15.0%
!!! AACTGAATTGATTTAATTAG+AGG + chr3_2:89764959-89764978 None:intergenic 20.0%
!!! TTAATATTTAGTTTCGTTTC+AGG - chr3_2:89764983-89765002 Msa0436300:intron 20.0%
!!! TAATATTTAGTTTCGTTTCA+GGG - chr3_2:89764984-89765003 Msa0436300:intron 20.0%
!! GAAAAAGTAAGATAAAAATG+AGG + chr3_2:89765214-89765233 None:intergenic 20.0%
!! AAAACTAACAAACAAAGTAT+CGG + chr3_2:89765372-89765391 None:intergenic 20.0%
!!! TATAAAAATGGATTTGGATT+TGG + chr3_2:89766040-89766059 None:intergenic 20.0%
!! TACGAAAAGAAATAAATCTT+TGG + chr3_2:89766247-89766266 None:intergenic 20.0%
!! CGTAATAATCATAATCAAAT+TGG - chr3_2:89766263-89766282 Msa0436300:intron 20.0%
!! TAGTCATGTAAAGAAATTAT+AGG - chr3_2:89767382-89767401 Msa0436300:intron 20.0%
!! AGTCATGTAAAGAAATTATA+GGG - chr3_2:89767383-89767402 Msa0436300:intron 20.0%
!!! ATATGGCTTTTAAAATATTC+TGG + chr3_2:89767516-89767535 None:intergenic 20.0%
!!! TGTTTTTATTAGTTGTATGA+TGG - chr3_2:89767607-89767626 Msa0436300:intron 20.0%
!!! GTTTTTATTAGTTGTATGAT+GGG - chr3_2:89767608-89767627 Msa0436300:intron 20.0%
!! ATGCATATATTTAATTACAC+AGG + chr3_2:89767677-89767696 None:intergenic 20.0%
!! AATATTACACATATTATGGT+GGG + chr3_2:89767876-89767895 None:intergenic 20.0%
!! ATTTCTTTGGCAATATTATT+AGG - chr3_2:89768015-89768034 Msa0436300:intron 20.0%
!!! ATGCATCAATTCTTTTTTAT+TGG - chr3_2:89768131-89768150 Msa0436300:intron 20.0%
!!! TGCATCAATTCTTTTTTATT+GGG - chr3_2:89768132-89768151 Msa0436300:intron 20.0%
!! ATTAATAATAATACATGGTC+GGG + chr3_2:89768461-89768480 None:intergenic 20.0%
!! AGAACAATTTAAAGAAACTA+AGG + chr3_2:89768693-89768712 None:intergenic 20.0%
!! ATTGAATGTTTGAAGAAAAA+CGG - chr3_2:89768806-89768825 Msa0436300:intron 20.0%
!! AATATGTCTTTCTATGTATT+AGG + chr3_2:89769478-89769497 None:intergenic 20.0%
!!! TATTTTTAATAGAGGTGATA+AGG + chr3_2:89769584-89769603 None:intergenic 20.0%
!!! TGCAATTTTTATTTAATCTG+TGG - chr3_2:89769783-89769802 Msa0436300:intron 20.0%
!! GAAATAAAAGATACTACATA+AGG + chr3_2:89769899-89769918 None:intergenic 20.0%
!! AAACTTTCAATTTCTTAAAG+TGG - chr3_2:89769957-89769976 Msa0436300:CDS 20.0%
!! GCAAATAATAATAATATGGA+TGG + chr3_2:89770289-89770308 None:intergenic 20.0%
!! ATTAGTATTACTTCCTAAAA+AGG - chr3_2:89770351-89770370 Msa0436300:CDS 20.0%
!! TGTTTAATTAACTGAATATG+CGG + chr3_2:89771387-89771406 None:intergenic 20.0%
!! AGTTAATTAAACAAGTAGAA+GGG - chr3_2:89771394-89771413 Msa0436300:intron 20.0%
!!! TTTTAAATAATCATGAGGTA+AGG + chr3_2:89771494-89771513 None:intergenic 20.0%
!!! ATATCAATCAGAAATTTTCA+AGG + chr3_2:89771630-89771649 None:intergenic 20.0%
!! TCATTGATGGTACATTTATA+TGG - chr3_2:89764778-89764797 Msa0436300:three_prime_UTR 25.0%
!!! AATTGGTAATGTTGTTGTAT+GGG + chr3_2:89764834-89764853 None:intergenic 25.0%
! TAGTAAGAGAGAAATAGTTA+CGG + chr3_2:89764932-89764951 None:intergenic 25.0%
! AGTAAGATAAAAATGAGGAA+AGG + chr3_2:89765209-89765228 None:intergenic 25.0%
!!! GAAAAAAAGTACCTCATATA+TGG + chr3_2:89765291-89765310 None:intergenic 25.0%
!!! GATACTTTGTTTGTTAGTTT+TGG - chr3_2:89765371-89765390 Msa0436300:intron 25.0%
! AATTATATTAACGGCCTATT+TGG + chr3_2:89765486-89765505 None:intergenic 25.0%
! AATCATGAAAGTTTCTTGAA+TGG - chr3_2:89765507-89765526 Msa0436300:CDS 25.0%
!! TTGAATGGTTTTTCTTTTAC+AGG - chr3_2:89765522-89765541 Msa0436300:CDS 25.0%
! AAAAGAAAGAAAAAATGGCA+AGG + chr3_2:89765750-89765769 None:intergenic 25.0%
!!! CTTTTTTTTTAATGAGTAGC+TGG - chr3_2:89765765-89765784 Msa0436300:CDS 25.0%
! GAGAATGAAATAGATATACA+AGG + chr3_2:89765964-89765983 None:intergenic 25.0%
!! CCAAAGTATAAAAATGGATT+TGG + chr3_2:89766046-89766065 None:intergenic 25.0%
!!! CCAAATCCATTTTTATACTT+TGG - chr3_2:89766043-89766062 Msa0436300:intron 25.0%
! CAAACTCCAAAGTATAAAAA+TGG + chr3_2:89766052-89766071 None:intergenic 25.0%
!!! CATTTTTATACTTTGGAGTT+TGG - chr3_2:89766050-89766069 Msa0436300:intron 25.0%
!!! TTGTTATTTTCTAATTGTCC+AGG - chr3_2:89766191-89766210 Msa0436300:intron 25.0%
! ATAGTTGAACGAAATATCTT+AGG + chr3_2:89766454-89766473 None:intergenic 25.0%
! CAAAGAGATCTACAAAAATT+CGG + chr3_2:89766515-89766534 None:intergenic 25.0%
! ATGAACATTACCTGATTAAT+GGG + chr3_2:89766760-89766779 None:intergenic 25.0%
!!! TCAAGTATTTTTGAGTACTA+TGG - chr3_2:89767008-89767027 Msa0436300:intron 25.0%
!!! TTTGAGTACTATGGTTTTAA+CGG - chr3_2:89767017-89767036 Msa0436300:intron 25.0%
! GGTATTTAACAAAATAACAG+AGG + chr3_2:89767188-89767207 None:intergenic 25.0%
! GTCATGTAAAGAAATTATAG+GGG - chr3_2:89767384-89767403 Msa0436300:intron 25.0%
! ATATGCATTTAGAGAAATTG+TGG - chr3_2:89767689-89767708 Msa0436300:intron 25.0%
! TATGCATTTAGAGAAATTGT+GGG - chr3_2:89767690-89767709 Msa0436300:intron 25.0%
! TCGAATTCAAACACATAATT+AGG + chr3_2:89767830-89767849 None:intergenic 25.0%
! CAATATTACACATATTATGG+TGG + chr3_2:89767877-89767896 None:intergenic 25.0%
! CACCATAATATGTGTAATAT+TGG - chr3_2:89767875-89767894 Msa0436300:intron 25.0%
! GTCCAATATTACACATATTA+TGG + chr3_2:89767880-89767899 None:intergenic 25.0%
!! GAAGTACATTAATTTGGAAA+TGG + chr3_2:89767902-89767921 None:intergenic 25.0%
! CTATACAAAACAATTACAGT+AGG + chr3_2:89768061-89768080 None:intergenic 25.0%
!!! CTACTGTAATTGTTTTGTAT+AGG - chr3_2:89768059-89768078 Msa0436300:intron 25.0%
! ACAAACTATGAAAGTCAAAA+GGG - chr3_2:89768085-89768104 Msa0436300:intron 25.0%
! TAAAAAAGAATTGATGCATG+TGG + chr3_2:89768130-89768149 None:intergenic 25.0%
!!! TCAATTCTTTTTTATTGGGA+TGG - chr3_2:89768136-89768155 Msa0436300:intron 25.0%
! AACAAATCAATCTGAAGATA+TGG + chr3_2:89768201-89768220 None:intergenic 25.0%
! TTGTTTGTAAATAGATCAGT+TGG - chr3_2:89768216-89768235 Msa0436300:intron 25.0%
!!! TAAATTTTACGGGTTACTAT+GGG - chr3_2:89768384-89768403 Msa0436300:intron 25.0%
!! AAGCAAAAACAACAACTTTT+GGG + chr3_2:89768536-89768555 None:intergenic 25.0%
!! TAAGCAAAAACAACAACTTT+TGG + chr3_2:89768537-89768556 None:intergenic 25.0%
!!! AAAAGTTGTTGTTTTTGCTT+AGG - chr3_2:89768536-89768555 Msa0436300:intron 25.0%
! CTATGAATTAGAGAGAAATT+GGG + chr3_2:89768562-89768581 None:intergenic 25.0%
! ACTATGAATTAGAGAGAAAT+TGG + chr3_2:89768563-89768582 None:intergenic 25.0%
! AGGAAGTAAACAAAAGAATA+AGG + chr3_2:89768645-89768664 None:intergenic 25.0%
!!! GAAGAATTTTTTTGGTAGAA+AGG + chr3_2:89768665-89768684 None:intergenic 25.0%
!!! AGGAAGTAGAAGAATTTTTT+TGG + chr3_2:89768673-89768692 None:intergenic 25.0%
! TTGAATGTTTGAAGAAAAAC+GGG - chr3_2:89768807-89768826 Msa0436300:intron 25.0%
!! GGTTTTTATTACTATGTTTG+AGG - chr3_2:89768828-89768847 Msa0436300:intron 25.0%
!!! TTTCTGGATTACATTTTTTC+AGG - chr3_2:89768857-89768876 Msa0436300:intron 25.0%
! AACCGGTAATTAGATTAAAT+AGG - chr3_2:89768951-89768970 Msa0436300:intron 25.0%
!!! CATGGTACTTGATATTTTAA+TGG + chr3_2:89769199-89769218 None:intergenic 25.0%
! TTAGAAATGAGGTTGTAAAT+AGG - chr3_2:89769271-89769290 Msa0436300:intron 25.0%
! TAAATAGGAGAATAGAATTG+AGG - chr3_2:89769286-89769305 Msa0436300:intron 25.0%
! AACAGAAAAATGAGAAGAAT+AGG + chr3_2:89769419-89769438 None:intergenic 25.0%
!! TTTTTCTTTCTCTTGTATTC+TGG - chr3_2:89769445-89769464 Msa0436300:CDS 25.0%
! ATACATAGAAAGACATATTC+TGG - chr3_2:89769479-89769498 Msa0436300:CDS 25.0%
!!! AAATATTAAGATTGGCCTTT+TGG - chr3_2:89769599-89769618 Msa0436300:intron 25.0%
!!! TTTTTATTTAATCTGTGGTG+AGG - chr3_2:89769788-89769807 Msa0436300:intron 25.0%
!!! TTTTATTTAATCTGTGGTGA+GGG - chr3_2:89769789-89769808 Msa0436300:intron 25.0%
! GTTAAGTGAAAATGTATAAC+TGG - chr3_2:89769811-89769830 Msa0436300:intron 25.0%
! AAGATACTACATAAGGATTA+AGG + chr3_2:89769892-89769911 None:intergenic 25.0%
!! ATTTTGCACAAAACCTTTTT+AGG + chr3_2:89770367-89770386 None:intergenic 25.0%
! AGGTAGAATGAGAAATTTAT+TGG + chr3_2:89770972-89770991 None:intergenic 25.0%
!! TTCTACCTTTTGTTAAATCA+AGG - chr3_2:89770984-89771003 Msa0436300:CDS 25.0%
!! CACCAAATCTTTTTGAATTT+TGG - chr3_2:89771087-89771106 Msa0436300:intron 25.0%
! TGCCAAAATTCAAAAAGATT+TGG + chr3_2:89771092-89771111 None:intergenic 25.0%
!!! AATCTTTTTGAATTTTGGCA+AGG - chr3_2:89771092-89771111 Msa0436300:intron 25.0%
! AACAAACAAGCTATCATAAA+CGG + chr3_2:89771154-89771173 None:intergenic 25.0%
! TTTAATTAACTGAATATGCG+GGG + chr3_2:89771385-89771404 None:intergenic 25.0%
! GTTTAATTAACTGAATATGC+GGG + chr3_2:89771386-89771405 None:intergenic 25.0%
! CAGTTAATTAAACAAGTAGA+AGG - chr3_2:89771393-89771412 Msa0436300:intron 25.0%
! GTTAATTAAACAAGTAGAAG+GGG - chr3_2:89771395-89771414 Msa0436300:intron 25.0%
! TTAATTAAACAAGTAGAAGG+GGG - chr3_2:89771396-89771415 Msa0436300:intron 25.0%
! AACATTAAGAAAGACTAATG+GGG + chr3_2:89771468-89771487 None:intergenic 25.0%
! CAACATTAAGAAAGACTAAT+GGG + chr3_2:89771469-89771488 None:intergenic 25.0%
!!! ATTTCAAATGTTCTAAGGAA+AGG + chr3_2:89771552-89771571 None:intergenic 25.0%
!! ACATTTGAAATCCTAGTTAA+AGG - chr3_2:89771561-89771580 Msa0436300:five_prime_UTR 25.0%
!! AAGTTGGGTAAATTTGTTGA+CGG - chr3_2:89764657-89764676 Msa0436300:three_prime_UTR 30.0%
! ATTTGTTGACGGATAAGAAA+AGG - chr3_2:89764668-89764687 Msa0436300:three_prime_UTR 30.0%
!! ATTGGTAATGTTGTTGTATG+GGG + chr3_2:89764833-89764852 None:intergenic 30.0%
!! GAATTGGTAATGTTGTTGTA+TGG + chr3_2:89764835-89764854 None:intergenic 30.0%
! ATGAATGAGTGATAGTGAAT+TGG + chr3_2:89764851-89764870 None:intergenic 30.0%
GTAGAAAATGATCGAATTGT+AGG + chr3_2:89765023-89765042 None:intergenic 30.0%
AGATAAAAATGAGGAAAGGT+TGG + chr3_2:89765205-89765224 None:intergenic 30.0%
! CTCTTTCCATTTTCAATTTC+AGG - chr3_2:89765238-89765257 Msa0436300:intron 30.0%
CCAATTCCTGAAATTGAAAA+TGG + chr3_2:89765247-89765266 None:intergenic 30.0%
! CCATTTTCAATTTCAGGAAT+TGG - chr3_2:89765244-89765263 Msa0436300:intron 30.0%
!!! GTTTGTTAGTTTTGGAGTAT+CGG - chr3_2:89765379-89765398 Msa0436300:intron 30.0%
!!! TTTGTTAGTTTTGGAGTATC+GGG - chr3_2:89765380-89765399 Msa0436300:intron 30.0%
TATAAGCAATTGTGAAAGTG+TGG + chr3_2:89765438-89765457 None:intergenic 30.0%
TCAAATGAGACTATCCAAAT+AGG - chr3_2:89765469-89765488 Msa0436300:CDS 30.0%
AAAAAATGGCAAGGTGATAT+AGG + chr3_2:89765741-89765760 None:intergenic 30.0%
ATGAAATGAGAATCCAAACA+TGG + chr3_2:89765907-89765926 None:intergenic 30.0%
ATGTTTGGATTCTCATTTCA+TGG - chr3_2:89765906-89765925 Msa0436300:CDS 30.0%
CTATGTTCATAATTGTAACC+AGG + chr3_2:89766002-89766021 None:intergenic 30.0%
CTTTGGATCAAATCATCAAA+GGG + chr3_2:89766230-89766249 None:intergenic 30.0%
TCTTTGGATCAAATCATCAA+AGG + chr3_2:89766231-89766250 None:intergenic 30.0%
ATATCTACAGAGACTATAAC+CGG + chr3_2:89766299-89766318 None:intergenic 30.0%
AGGAATTAAACCTGATATGT+TGG - chr3_2:89766361-89766380 Msa0436300:intron 30.0%
CAAAAATTCGGTATATCAGT+GGG + chr3_2:89766503-89766522 None:intergenic 30.0%
ACAAAAATTCGGTATATCAG+TGG + chr3_2:89766504-89766523 None:intergenic 30.0%
! AACTTCTTTGCACAGAATTT+TGG + chr3_2:89766544-89766563 None:intergenic 30.0%
AAATTCTGTGCAAAGAAGTT+TGG - chr3_2:89766544-89766563 Msa0436300:intron 30.0%
! TTATACTTTTCAGCAATAGC+AGG + chr3_2:89766607-89766626 None:intergenic 30.0%
TGAACATTACCTGATTAATG+GGG + chr3_2:89766759-89766778 None:intergenic 30.0%
CATGAACATTACCTGATTAA+TGG + chr3_2:89766761-89766780 None:intergenic 30.0%
!!! TCAAGTATTTTTGAGTGCTA+TGG - chr3_2:89766872-89766891 Msa0436300:intron 30.0%
GTATAGTGATAGATCACTAT+TGG - chr3_2:89767235-89767254 Msa0436300:intron 30.0%
! GATCACTATTGGTGTATTTT+AGG - chr3_2:89767246-89767265 Msa0436300:intron 30.0%
!! AGATAGTTATGTTTTTGCTG+TGG - chr3_2:89767327-89767346 Msa0436300:intron 30.0%
GACACACAATTAGGAAAATA+TGG + chr3_2:89767533-89767552 None:intergenic 30.0%
GGTAGTTATTTGAGTGATTA+TGG - chr3_2:89767645-89767664 Msa0436300:intron 30.0%
ATGCATTTAGAGAAATTGTG+GGG - chr3_2:89767691-89767710 Msa0436300:intron 30.0%
!! AACAATGAAGGTTGATGTTA+GGG - chr3_2:89767745-89767764 Msa0436300:intron 30.0%
CCAGTTGAAGTACATTAATT+TGG + chr3_2:89767908-89767927 None:intergenic 30.0%
CCAAATTAATGTACTTCAAC+TGG - chr3_2:89767905-89767924 Msa0436300:intron 30.0%
CACAAACTATGAAAGTCAAA+AGG - chr3_2:89768084-89768103 Msa0436300:intron 30.0%
! GGCATTAATTTTTCATGCAA+AGG - chr3_2:89768237-89768256 Msa0436300:intron 30.0%
!! GTAAATTTTACGGGTTACTA+TGG - chr3_2:89768383-89768402 Msa0436300:intron 30.0%
TCAACAAAAGATGAAGCATA+AGG + chr3_2:89768720-89768739 None:intergenic 30.0%
TGACACAAGTAATAGAAGAA+AGG + chr3_2:89768743-89768762 None:intergenic 30.0%
ATCTAGATTTATGCTGTTAC+TGG - chr3_2:89768881-89768900 Msa0436300:intron 30.0%
! TAATCTAATTACCGGTTGTT+CGG + chr3_2:89768948-89768967 None:intergenic 30.0%
GGCCTATTTAATCTAATTAC+CGG + chr3_2:89768956-89768975 None:intergenic 30.0%
! TATCCTAGGAAAGTACATTA+TGG + chr3_2:89769035-89769054 None:intergenic 30.0%
TTATCCTCGATTTATATCCT+AGG + chr3_2:89769049-89769068 None:intergenic 30.0%
TTCTCTCAGATGATATAACT+TGG - chr3_2:89769127-89769146 Msa0436300:intron 30.0%
TCTCTCAGATGATATAACTT+GGG - chr3_2:89769128-89769147 Msa0436300:intron 30.0%
AGATGATATAACTTGGGATT+TGG - chr3_2:89769134-89769153 Msa0436300:intron 30.0%
! TTAGTGGTTAGTTAGAAATG+AGG - chr3_2:89769260-89769279 Msa0436300:intron 30.0%
GCTGTCAAATTTGAGAATTA+GGG - chr3_2:89769316-89769335 Msa0436300:intron 30.0%
AAAGACATATTCTGGTATTG+TGG - chr3_2:89769487-89769506 Msa0436300:CDS 30.0%
AAGACATATTCTGGTATTGT+GGG - chr3_2:89769488-89769507 Msa0436300:CDS 30.0%
! ATGACCTTTAACTTAATCCA+TGG - chr3_2:89769554-89769573 Msa0436300:intron 30.0%
! TGACCTTTAACTTAATCCAT+GGG - chr3_2:89769555-89769574 Msa0436300:intron 30.0%
!!! CATTTTTCTAAGATTCGGTT+GGG - chr3_2:89769623-89769642 Msa0436300:intron 30.0%
!!! ATTTTTCTAAGATTCGGTTG+GGG - chr3_2:89769624-89769643 Msa0436300:intron 30.0%
ATGCAACGAAATAATAAACC+CGG - chr3_2:89769862-89769881 Msa0436300:CDS 30.0%
AACACACACTTTCTTCTATT+GGG + chr3_2:89770022-89770041 None:intergenic 30.0%
TAACACACACTTTCTTCTAT+TGG + chr3_2:89770023-89770042 None:intergenic 30.0%
!!! CATTTGCTGACTTGTTTTAT+TGG - chr3_2:89770225-89770244 Msa0436300:CDS 30.0%
!!! TTTTTTTTTCTAGGTACGTG+TGG - chr3_2:89770593-89770612 Msa0436300:intron 30.0%
TGGAACAAAAATATGCTGAT+GGG - chr3_2:89770839-89770858 Msa0436300:intron 30.0%
GCTTTCCTTGATTTAACAAA+AGG + chr3_2:89770992-89771011 None:intergenic 30.0%
TTCTGCAAGCAGAAAATATA+TGG + chr3_2:89771025-89771044 None:intergenic 30.0%
ACAAACAAGCTATCATAAAC+GGG + chr3_2:89771153-89771172 None:intergenic 30.0%
CATATATAGATCAACTTTGC+TGG + chr3_2:89771293-89771312 None:intergenic 30.0%
GCAACATTAAGAAAGACTAA+TGG + chr3_2:89771470-89771489 None:intergenic 30.0%
CTAGGATTTCAAATGTTCTA+AGG + chr3_2:89771557-89771576 None:intergenic 30.0%
TGAAATCCTAGTTAAAGGAA+AGG - chr3_2:89771566-89771585 Msa0436300:five_prime_UTR 30.0%
TATATGCATGTCTAATTGAC+AGG - chr3_2:89771650-89771669 Msa0436300:intron 30.0%
!!! TTTTTTCCATCTATCTCATG+GGG + chr3_2:89771688-89771707 None:intergenic 30.0%
!!! CTTTTTTCCATCTATCTCAT+GGG + chr3_2:89771689-89771708 None:intergenic 30.0%
AGATAGATGGAAAAAAGCTA+TGG - chr3_2:89771692-89771711 Msa0436300:five_prime_UTR 30.0%
!! ATACAATTTTGACGTGTTTC+CGG + chr3_2:89771768-89771787 None:intergenic 30.0%
CTGGTAGTAAAATTGAAGTG+TGG - chr3_2:89764719-89764738 Msa0436300:three_prime_UTR 35.0%
ACGGAGAAGAATTGAAGAAA+GGG + chr3_2:89764913-89764932 None:intergenic 35.0%
TACGGAGAAGAATTGAAGAA+AGG + chr3_2:89764914-89764933 None:intergenic 35.0%
TTTAGAGGAAGAAGTGATTG+TGG + chr3_2:89765045-89765064 None:intergenic 35.0%
TGAGATTGATGAAACTCTCA+TGG - chr3_2:89765120-89765139 Msa0436300:intron 35.0%
GAGATTGATGAAACTCTCAT+GGG - chr3_2:89765121-89765140 Msa0436300:intron 35.0%
TGAATCAACAAACCATGAGT+TGG + chr3_2:89765168-89765187 None:intergenic 35.0%
TTTCAATTTCAGGAATTGGC+TGG - chr3_2:89765248-89765267 Msa0436300:intron 35.0%
! CTTTTACAGGTTTACAAACC+AGG - chr3_2:89765535-89765554 Msa0436300:CDS 35.0%
AGTCGTGTTCTTACTATATG+TGG - chr3_2:89765565-89765584 Msa0436300:intron 35.0%
TCACTTTGGTTATAAGCCTT+TGG - chr3_2:89765636-89765655 Msa0436300:intron 35.0%
TACTAGAATGTCAAAGTCCT+TGG + chr3_2:89765880-89765899 None:intergenic 35.0%
ATTCTAGTAGATGCCATGTT+TGG - chr3_2:89765891-89765910 Msa0436300:intron 35.0%
GTAACCAGGATTCATAACAT+TGG + chr3_2:89765988-89766007 None:intergenic 35.0%
! GTTTTGTCTGTTATCAACAC+AGG - chr3_2:89766105-89766124 Msa0436300:intron 35.0%
TCAAATTGGCCAAAAAAGAC+CGG - chr3_2:89766277-89766296 Msa0436300:intron 35.0%
!!! AGACTATAACCGGTCTTTTT+TGG + chr3_2:89766289-89766308 None:intergenic 35.0%
TCTCTGTAGATATTCCTTCT+GGG - chr3_2:89766306-89766325 Msa0436300:intron 35.0%
TGGATATGTACCAACATATC+AGG + chr3_2:89766374-89766393 None:intergenic 35.0%
TGATATGTTGGTACATATCC+AGG - chr3_2:89766373-89766392 Msa0436300:intron 35.0%
GATATGTTGGTACATATCCA+GGG - chr3_2:89766374-89766393 Msa0436300:intron 35.0%
AATGAAACAGATATATGCCC+TGG + chr3_2:89766394-89766413 None:intergenic 35.0%
CAAATCTACCTCCTAAAAAG+TGG + chr3_2:89766579-89766598 None:intergenic 35.0%
!! AGAGCTGAAATATCGATTTG+AGG + chr3_2:89766685-89766704 None:intergenic 35.0%
CAAGTCATTAACTACCAACA+GGG + chr3_2:89766826-89766845 None:intergenic 35.0%
TCAAGTCATTAACTACCAAC+AGG + chr3_2:89766827-89766846 None:intergenic 35.0%
!!! TGAGTGCTATGGTTTTAATC+AGG - chr3_2:89766883-89766902 Msa0436300:intron 35.0%
CAAGTCATTATCTACCAACA+GGG + chr3_2:89766962-89766981 None:intergenic 35.0%
TCAAGTCATTATCTACCAAC+AGG + chr3_2:89766963-89766982 None:intergenic 35.0%
ACGCATCATCAAACCATTTA+CGG + chr3_2:89767091-89767110 None:intergenic 35.0%
!! TAAATGGTTTGATGATGCGT+TGG - chr3_2:89767091-89767110 Msa0436300:intron 35.0%
TTTGAAGGAACCAAATGCTA+TGG - chr3_2:89767121-89767140 Msa0436300:intron 35.0%
AATAACAGAGGCTGATCTTA+CGG + chr3_2:89767176-89767195 None:intergenic 35.0%
CTAGTGATCTTGAAGACAAA+AGG + chr3_2:89767209-89767228 None:intergenic 35.0%
! CTTTTGTCTTCAAGATCACT+AGG - chr3_2:89767207-89767226 Msa0436300:intron 35.0%
CAATAACAAACCAGATCACA+AGG + chr3_2:89767467-89767486 None:intergenic 35.0%
TAATTAGACCTTGCTAGACT+GGG + chr3_2:89767585-89767604 None:intergenic 35.0%
ATAATTAGACCTTGCTAGAC+TGG + chr3_2:89767586-89767605 None:intergenic 35.0%
!! TTGTATGATGGGCATGTATT+TGG - chr3_2:89767619-89767638 Msa0436300:intron 35.0%
TGCATTTAGAGAAATTGTGG+GGG - chr3_2:89767692-89767711 Msa0436300:intron 35.0%
!! GAACAATGAAGGTTGATGTT+AGG - chr3_2:89767744-89767763 Msa0436300:intron 35.0%
!! ACAATGAAGGTTGATGTTAG+GGG - chr3_2:89767746-89767765 Msa0436300:intron 35.0%
! ATTGCTAAAAGGCTTTGACA+AGG - chr3_2:89767949-89767968 Msa0436300:intron 35.0%
TGAAATCAATAGTCACCTGT+CGG + chr3_2:89768168-89768187 None:intergenic 35.0%
AATGTGTAAAGTAGTTCGTC+GGG + chr3_2:89768329-89768348 None:intergenic 35.0%
GAATGTGTAAAGTAGTTCGT+CGG + chr3_2:89768330-89768349 None:intergenic 35.0%
GACGAACTACTTTACACATT+CGG - chr3_2:89768329-89768348 Msa0436300:intron 35.0%
ACTACTTTACACATTCGGTT+CGG - chr3_2:89768334-89768353 Msa0436300:intron 35.0%
! GGTTAGACGGGTAAATTTTA+CGG - chr3_2:89768373-89768392 Msa0436300:intron 35.0%
! GTTAGACGGGTAAATTTTAC+GGG - chr3_2:89768374-89768393 Msa0436300:intron 35.0%
TTACTATGGGTAATTCGGTT+CGG - chr3_2:89768397-89768416 Msa0436300:intron 35.0%
! ATGTTTGAGGAGTAGTTTTC+TGG - chr3_2:89768841-89768860 Msa0436300:intron 35.0%
! AATCTAATTACCGGTTGTTC+GGG + chr3_2:89768947-89768966 None:intergenic 35.0%
ATGCCATAATGTACTTTCCT+AGG - chr3_2:89769029-89769048 Msa0436300:intron 35.0%
CTTTCCTAGGATATAAATCG+AGG - chr3_2:89769042-89769061 Msa0436300:intron 35.0%
GAAGAGAATGTTCAAGATTG+TGG - chr3_2:89769095-89769114 Msa0436300:intron 35.0%
GCATTCTTGTATCACTTGTT+TGG + chr3_2:89769234-89769253 None:intergenic 35.0%
TAGGAGAATAGAATTGAGGT+AGG - chr3_2:89769290-89769309 Msa0436300:intron 35.0%
AGGAGAATAGAATTGAGGTA+GGG - chr3_2:89769291-89769310 Msa0436300:intron 35.0%
GGCTGTCAAATTTGAGAATT+AGG - chr3_2:89769315-89769334 Msa0436300:intron 35.0%
GTCAAATTTGAGAATTAGGG+TGG - chr3_2:89769319-89769338 Msa0436300:intron 35.0%
TGATAAAATACCACACACCT+AGG + chr3_2:89769368-89769387 None:intergenic 35.0%
GTCTTTCTATGTATTAGGAC+TGG + chr3_2:89769473-89769492 None:intergenic 35.0%
! GACCTTTAACTTAATCCATG+GGG - chr3_2:89769556-89769575 Msa0436300:intron 35.0%
! TTCCCCATGGATTAAGTTAA+AGG + chr3_2:89769561-89769580 None:intergenic 35.0%
ACATAAGGATTAAGGTCAAC+CGG + chr3_2:89769884-89769903 None:intergenic 35.0%
TCTTAAAGTGGAATAGAGCT+TGG - chr3_2:89769969-89769988 Msa0436300:CDS 35.0%
ACACTTTCTTCTATTGGGTA+TGG + chr3_2:89770017-89770036 None:intergenic 35.0%
AGCTAGATGACCTATATCTT+AGG - chr3_2:89770116-89770135 Msa0436300:intron 35.0%
ACATGCACTTGATTTCATCT+TGG + chr3_2:89770163-89770182 None:intergenic 35.0%
GTGAATCAACACTAAATTGC+TGG + chr3_2:89770562-89770581 None:intergenic 35.0%
TGTTCAGAAAGTTTCTGATG+AGG - chr3_2:89770623-89770642 Msa0436300:intron 35.0%
CTGGAACAAAAATATGCTGA+TGG - chr3_2:89770838-89770857 Msa0436300:intron 35.0%
! TGATTAGCTCTTGTTGCATT+TGG - chr3_2:89770946-89770965 Msa0436300:CDS 35.0%
TGATCCCTAAACCTAAAAAC+TGG - chr3_2:89771048-89771067 Msa0436300:intron 35.0%
GATCCCTAAACCTAAAAACT+GGG - chr3_2:89771049-89771068 Msa0436300:intron 35.0%
ATCCCTAAACCTAAAAACTG+GGG - chr3_2:89771050-89771069 Msa0436300:intron 35.0%
AAACAAGCTATCATAAACGG+GGG + chr3_2:89771151-89771170 None:intergenic 35.0%
CAAACAAGCTATCATAAACG+GGG + chr3_2:89771152-89771171 None:intergenic 35.0%
TGTAAGTTGTCATACACACA+CGG + chr3_2:89771213-89771232 None:intergenic 35.0%
GTTACTCCTTTCCTTTAACT+AGG + chr3_2:89771575-89771594 None:intergenic 35.0%
AAGGAAAATTTACCTCACAC+GGG + chr3_2:89771611-89771630 None:intergenic 35.0%
CAAGGAAAATTTACCTCACA+CGG + chr3_2:89771612-89771631 None:intergenic 35.0%
!!! GCTTTTTTCCATCTATCTCA+TGG + chr3_2:89771690-89771709 None:intergenic 35.0%
AGATGGAAAAAAGCTATGGA+AGG - chr3_2:89771696-89771715 Msa0436300:five_prime_UTR 35.0%
CTCATCACACTGAATTATCA+GGG + chr3_2:89771736-89771755 None:intergenic 35.0%
ACTCATCACACTGAATTATC+AGG + chr3_2:89771737-89771756 None:intergenic 35.0%
AATGCGTTGCATTATTCCAA+TGG + chr3_2:89771851-89771870 None:intergenic 35.0%
GACCTGATTCTGTTTAGAAA+TGG - chr3_2:89771945-89771964 Msa0436300:five_prime_UTR 35.0%
CACCATTTCTAAACAGAATC+AGG + chr3_2:89771950-89771969 None:intergenic 35.0%
GTTTAGAAATGGTGAGTATG+CGG - chr3_2:89771956-89771975 Msa0436300:five_prime_UTR 35.0%
TGAAGAGATGCGTTCATTGA+TGG - chr3_2:89764765-89764784 Msa0436300:three_prime_UTR 40.0%
GAGAAGAATTGAAGAAAGGG+AGG + chr3_2:89764910-89764929 None:intergenic 40.0%
CGAAATTGGACATGGTTTAG+AGG + chr3_2:89765060-89765079 None:intergenic 40.0%
! TTTGAGGTAAGTGACTGAGT+CGG + chr3_2:89765086-89765105 None:intergenic 40.0%
!! CAACAGCTTCTTGTTGTTTG+AGG + chr3_2:89765102-89765121 None:intergenic 40.0%
!! ACACGTATCACGGAAGTATT+TGG + chr3_2:89765337-89765356 None:intergenic 40.0%
!! AGTATCGGGCTTTTTAGAGA+TGG - chr3_2:89765394-89765413 Msa0436300:intron 40.0%
GTTCTTACTATATGTGGTCC+TGG - chr3_2:89765571-89765590 Msa0436300:intron 40.0%
ATATGTGGTCCTGGTAACAA+TGG - chr3_2:89765580-89765599 Msa0436300:intron 40.0%
GCTTATAACCAAAGTGATGC+AGG + chr3_2:89765633-89765652 None:intergenic 40.0%
GTAACTAACCCAGCATATAG+AGG + chr3_2:89765688-89765707 None:intergenic 40.0%
!! ATATGCTGGGTTAGTTACTC+AGG - chr3_2:89765690-89765709 Msa0436300:intron 40.0%
ATTGTCGATCCCTTTCTTGT+CGG - chr3_2:89765830-89765849 Msa0436300:intron 40.0%
TCTACCATCAGATTTCTCCA+AGG - chr3_2:89765860-89765879 Msa0436300:intron 40.0%
AAGTCCTTGGAGAAATCTGA+TGG + chr3_2:89765867-89765886 None:intergenic 40.0%
CTCACCAATGTTATGAATCC+TGG - chr3_2:89765981-89766000 Msa0436300:intron 40.0%
TGGATCAAATCATCAAAGGG+AGG + chr3_2:89766227-89766246 None:intergenic 40.0%
GTCTCTGTAGATATTCCTTC+TGG - chr3_2:89766305-89766324 Msa0436300:intron 40.0%
TTCTGTGCAAAGAAGTTTGG+CGG - chr3_2:89766547-89766566 Msa0436300:intron 40.0%
TACCTCCTAAAAAGTGGTGA+GGG + chr3_2:89766573-89766592 None:intergenic 40.0%
! ACTTTTCAGCAATAGCAGGT+GGG + chr3_2:89766603-89766622 None:intergenic 40.0%
! TACTTTTCAGCAATAGCAGG+TGG + chr3_2:89766604-89766623 None:intergenic 40.0%
CTTATACTTCCACCATATCC+TGG - chr3_2:89766628-89766647 Msa0436300:intron 40.0%
TTTGAGGAGGCTTTCCAATT+CGG + chr3_2:89766669-89766688 None:intergenic 40.0%
!! GCTGAAATATCGATTTGAGG+AGG + chr3_2:89766682-89766701 None:intergenic 40.0%
TCCAGAATTTCTTGAAGACC+AGG - chr3_2:89766723-89766742 Msa0436300:intron 40.0%
! ACCTGGTCTTCAAGAAATTC+TGG + chr3_2:89766727-89766746 None:intergenic 40.0%
AGAATTTCTTGAAGACCAGG+TGG - chr3_2:89766726-89766745 Msa0436300:intron 40.0%
ATTAACTACCAACAGGGAAG+AGG + chr3_2:89766820-89766839 None:intergenic 40.0%
ATTATCTACCAACAGGGAAG+AGG + chr3_2:89766956-89766975 None:intergenic 40.0%
TCAAACCATTTACGGAACTG+CGG + chr3_2:89767083-89767102 None:intergenic 40.0%
ATCCTTTCCTACAGTTGACA+AGG + chr3_2:89767147-89767166 None:intergenic 40.0%
TTGTCAACTGTAGGAAAGGA+TGG - chr3_2:89767146-89767165 Msa0436300:intron 40.0%
CTAATCAGGTCTACTAGACT+AGG + chr3_2:89767287-89767306 None:intergenic 40.0%
GTTTGTGTAGTCTTTGAACG+AGG - chr3_2:89767422-89767441 Msa0436300:intron 40.0%
AATAGCGCAGACACACAATT+AGG + chr3_2:89767542-89767561 None:intergenic 40.0%
TAATTGTGTGTCTGCGCTAT+TGG - chr3_2:89767541-89767560 Msa0436300:intron 40.0%
GTGCTGTGTTTGAACAATGA+AGG - chr3_2:89767733-89767752 Msa0436300:intron 40.0%
CAATAATACACCAGCACACA+GGG + chr3_2:89767776-89767795 None:intergenic 40.0%
ACAATAATACACCAGCACAC+AGG + chr3_2:89767777-89767796 None:intergenic 40.0%
TCACGGATCGTATTGCTAAA+AGG - chr3_2:89767938-89767957 Msa0436300:intron 40.0%
! CTAAAAGGCTTTGACAAGGA+TGG - chr3_2:89767953-89767972 Msa0436300:intron 40.0%
! TTGACAAGGATGGATTTGTG+TGG - chr3_2:89767963-89767982 Msa0436300:intron 40.0%
AGTAGTTCGTCGGGTAAATT+CGG + chr3_2:89768320-89768339 None:intergenic 40.0%
CTACTTTACACATTCGGTTC+GGG - chr3_2:89768335-89768354 Msa0436300:intron 40.0%
!! ACATTCGGTTCGGGTTAAAA+CGG - chr3_2:89768344-89768363 Msa0436300:intron 40.0%
! ACGGGTTACTATGGGTAATT+CGG - chr3_2:89768392-89768411 Msa0436300:intron 40.0%
!! TTCGGTTCGGTTTGATGTTT+AGG - chr3_2:89768415-89768434 Msa0436300:intron 40.0%
AAGTACATTATGGCATGCTG+TGG + chr3_2:89769025-89769044 None:intergenic 40.0%
TCTTGTATCACTTGTTTGGC+TGG + chr3_2:89769230-89769249 None:intergenic 40.0%
ACAAGAATGCTCTCTGTTAG+TGG - chr3_2:89769244-89769263 Msa0436300:intron 40.0%
AGAATAGAATTGAGGTAGGG+CGG - chr3_2:89769294-89769313 Msa0436300:intron 40.0%
AATTTGAGAATTAGGGTGGC+AGG - chr3_2:89769323-89769342 Msa0436300:intron 40.0%
! ACTGGTTCCTTGAATTACCT+AGG - chr3_2:89769348-89769367 Msa0436300:intron 40.0%
GTTACCAAATCAAGACCTTC+AGG + chr3_2:89769651-89769670 None:intergenic 40.0%
CATAAGGATTAAGGTCAACC+GGG + chr3_2:89769883-89769902 None:intergenic 40.0%
GACCTATATCTTAGGACAAC+TGG - chr3_2:89770124-89770143 Msa0436300:intron 40.0%
TGCCAGTTGTCCTAAGATAT+AGG + chr3_2:89770129-89770148 None:intergenic 40.0%
TTATTGTGACCTCACAAAGC+TGG - chr3_2:89770428-89770447 Msa0436300:intron 40.0%
! TTACATTAGCCAGCTTTGTG+AGG + chr3_2:89770440-89770459 None:intergenic 40.0%
!!! TTTTTTCTAGGTACGTGTGG+AGG - chr3_2:89770596-89770615 Msa0436300:intron 40.0%
! TTTTTCTAGGTACGTGTGGA+GGG - chr3_2:89770597-89770616 Msa0436300:intron 40.0%
!!! CTCCCCAGTTTTTAGGTTTA+GGG + chr3_2:89771055-89771074 None:intergenic 40.0%
GTGTGTGTATGACAACTTAC+AGG - chr3_2:89771212-89771231 Msa0436300:intron 40.0%
! CATTTTTCGCTGCACAGTTT+AGG - chr3_2:89771247-89771266 Msa0436300:intron 40.0%
!!! AGTCTGACAGGGAACTTTTT+TGG + chr3_2:89771427-89771446 None:intergenic 40.0%
TCACACGGGTAAACAACAAA+AGG + chr3_2:89771597-89771616 None:intergenic 40.0%
!!! TTTTGTTGTTTACCCGTGTG+AGG - chr3_2:89771596-89771615 Msa0436300:intron 40.0%
AAAAGCTATGGAAGGTTGAG+CGG - chr3_2:89771704-89771723 Msa0436300:five_prime_UTR 40.0%
!! AATTTTGACGTGTTTCCGGT+GGG + chr3_2:89771764-89771783 None:intergenic 40.0%
GATTGAGATTGCAGTTCCAT+TGG - chr3_2:89771832-89771851 Msa0436300:five_prime_UTR 40.0%
CGGATAAGAAAAGGCCAACA+AGG - chr3_2:89764677-89764696 Msa0436300:three_prime_UTR 45.0%
CGTGTTCTTGATTGCCTTGT+TGG + chr3_2:89764694-89764713 None:intergenic 45.0%
CAATCAAGAACACGCGATTC+TGG - chr3_2:89764700-89764719 Msa0436300:three_prime_UTR 45.0%
! CGTTTCAGGGTATTCTTCTC+AGG - chr3_2:89764997-89765016 Msa0436300:intron 45.0%
GTCGGAATCGAAATTGGACA+TGG + chr3_2:89765068-89765087 None:intergenic 45.0%
GACTGAGTCGGAATCGAAAT+TGG + chr3_2:89765074-89765093 None:intergenic 45.0%
CGTCGCTACTTCCATATATG+AGG - chr3_2:89765277-89765296 Msa0436300:intron 45.0%
TGTGACACTGACACGTATCA+CGG + chr3_2:89765347-89765366 None:intergenic 45.0%
!! TAACAATGGTGGTGATGGTC+TGG - chr3_2:89765594-89765613 Msa0436300:intron 45.0%
AACCAAAGTGATGCAGGTGA+CGG + chr3_2:89765627-89765646 None:intergenic 45.0%
AACCCAGCATATAGAGGCTT+GGG + chr3_2:89765682-89765701 None:intergenic 45.0%
TAACCCAGCATATAGAGGCT+TGG + chr3_2:89765683-89765702 None:intergenic 45.0%
GATCTTCCACCGACAAGAAA+GGG + chr3_2:89765842-89765861 None:intergenic 45.0%
AGATCTTCCACCGACAAGAA+AGG + chr3_2:89765843-89765862 None:intergenic 45.0%
CTAATTGTCCAGGTTCTCCA+AGG - chr3_2:89766201-89766220 Msa0436300:intron 45.0%
AAATCATCAAAGGGAGGCCT+TGG + chr3_2:89766221-89766240 None:intergenic 45.0%
CTGTAGATATTCCTTCTGGG+TGG - chr3_2:89766309-89766328 Msa0436300:intron 45.0%
GTTGAAGAGGGAGATGTTGA+TGG - chr3_2:89766335-89766354 Msa0436300:intron 45.0%
!! CTTTGCACAGAATTTTGGCG+CGG + chr3_2:89766539-89766558 None:intergenic 45.0%
CTACCTCCTAAAAAGTGGTG+AGG + chr3_2:89766574-89766593 None:intergenic 45.0%
ATGGATGTTCCAGGATATGG+TGG + chr3_2:89766640-89766659 None:intergenic 45.0%
CACATGGATGTTCCAGGATA+TGG + chr3_2:89766643-89766662 None:intergenic 45.0%
ACATCCATGTGTGTCCGAAT+TGG - chr3_2:89766652-89766671 Msa0436300:intron 45.0%
CTTTCCAATTCGGACACACA+TGG + chr3_2:89766659-89766678 None:intergenic 45.0%
ATTTCTTGAAGACCAGGTGG+AGG - chr3_2:89766729-89766748 Msa0436300:intron 45.0%
ATTACCCGCAGTTCCGTAAA+TGG - chr3_2:89767075-89767094 Msa0436300:intron 45.0%
CAAACCATTTACGGAACTGC+GGG + chr3_2:89767082-89767101 None:intergenic 45.0%
GTTGACAAGGCCATAGCATT+TGG + chr3_2:89767134-89767153 None:intergenic 45.0%
TGAACGAGGAAACTCCTTGT+AGG - chr3_2:89767436-89767455 Msa0436300:intron 45.0%
GAACGAGGAAACTCCTTGTA+GGG - chr3_2:89767437-89767456 Msa0436300:intron 45.0%
AACGAGGAAACTCCTTGTAG+GGG - chr3_2:89767438-89767457 Msa0436300:intron 45.0%
TAGTTGTACCCAGTCTAGCA+AGG - chr3_2:89767574-89767593 Msa0436300:intron 45.0%
! TGATGGGCATGTATTTGGTG+CGG - chr3_2:89767624-89767643 Msa0436300:intron 45.0%
TTGGGATGGTTTAAACCGAC+AGG - chr3_2:89768150-89768169 Msa0436300:intron 45.0%
GTAGTTCGTCGGGTAAATTC+GGG + chr3_2:89768319-89768338 None:intergenic 45.0%
!! CATTCGGTTCGGGTTAAAAC+GGG - chr3_2:89768345-89768364 Msa0436300:intron 45.0%
!! GTTCGGGTTAAAACGGGTTA+CGG - chr3_2:89768351-89768370 Msa0436300:intron 45.0%
!! TTCGGGTTAAAACGGGTTAC+GGG - chr3_2:89768352-89768371 Msa0436300:intron 45.0%
!! AAAACGGGTTACGGGTTAGA+CGG - chr3_2:89768360-89768379 Msa0436300:intron 45.0%
!! ATGGGTAATTCGGTTCGGTT+CGG - chr3_2:89768402-89768421 Msa0436300:intron 45.0%
AATACATGGTCGGGTTCCTT+CGG + chr3_2:89768452-89768471 None:intergenic 45.0%
ATGAGTGAGAGTGAGAGTGA+GGG + chr3_2:89768600-89768619 None:intergenic 45.0%
! TGTTCGGGTTCGGGTAAAAA+CGG + chr3_2:89768932-89768951 None:intergenic 45.0%
! AATTACCGGTTGTTCGGGTT+CGG + chr3_2:89768942-89768961 None:intergenic 45.0%
AGATTAAATAGGCCTACCCG+TGG - chr3_2:89768962-89768981 Msa0436300:intron 45.0%
GATTAAATAGGCCTACCCGT+GGG - chr3_2:89768963-89768982 Msa0436300:intron 45.0%
GTTTGGCTGGACATATCTCA+TGG + chr3_2:89769217-89769236 None:intergenic 45.0%
CCACACACCTAGGTAATTCA+AGG + chr3_2:89769358-89769377 None:intergenic 45.0%
CCTTGAATTACCTAGGTGTG+TGG - chr3_2:89769355-89769374 Msa0436300:intron 45.0%
! TTTTCTAGGTACGTGTGGAG+GGG - chr3_2:89770598-89770617 Msa0436300:intron 45.0%
TATTTCCATAGCCGTCCTAG+AGG - chr3_2:89770657-89770676 Msa0436300:intron 45.0%
! CAATCTGACTACCTCTAGGA+CGG + chr3_2:89770671-89770690 None:intergenic 45.0%
CATTAGAGTTCTGTAGTGCC+TGG - chr3_2:89770784-89770803 Msa0436300:intron 45.0%
TCTTCTTCTGTTACTCCCCT+TGG - chr3_2:89770906-89770925 Msa0436300:CDS 45.0%
TAATCAGATGTCCGAAGTCC+AGG + chr3_2:89770932-89770951 None:intergenic 45.0%
!!! CCTCCCCAGTTTTTAGGTTT+AGG + chr3_2:89771056-89771075 None:intergenic 45.0%
CCTAAACCTAAAAACTGGGG+AGG - chr3_2:89771053-89771072 Msa0436300:intron 45.0%
! CTGTATCCTCCCCAGTTTTT+AGG + chr3_2:89771062-89771081 None:intergenic 45.0%
CTAAAAACTGGGGAGGATAC+AGG - chr3_2:89771060-89771079 Msa0436300:intron 45.0%
AGAAATCTCGCTTGCATGAC+AGG - chr3_2:89771117-89771136 Msa0436300:intron 45.0%
GTTGTCATACACACACGGTT+TGG + chr3_2:89771208-89771227 None:intergenic 45.0%
GATGTAGCAGAAGTCTGACA+GGG + chr3_2:89771438-89771457 None:intergenic 45.0%
AGATGTAGCAGAAGTCTGAC+AGG + chr3_2:89771439-89771458 None:intergenic 45.0%
TACGTTCCCCATGAGATAGA+TGG - chr3_2:89771679-89771698 Msa0436300:five_prime_UTR 45.0%
!! ATTTTGACGTGTTTCCGGTG+GGG + chr3_2:89771763-89771782 None:intergenic 45.0%
!! CAATTTTGACGTGTTTCCGG+TGG + chr3_2:89771765-89771784 None:intergenic 45.0%
!! TATAAATTAATAATAATACA+TGG + chr3_2:89768466-89768485 None:intergenic 5.0%
GAAACTCTCATGGGTCCTCT+TGG - chr3_2:89765130-89765149 Msa0436300:intron 50.0%
AGAACACGACTATACTCGCC+TGG + chr3_2:89765556-89765575 None:intergenic 50.0%
TGTGGTCCTGGTAACAATGG+TGG - chr3_2:89765583-89765602 Msa0436300:intron 50.0%
CCATCACCACCATTGTTACC+AGG + chr3_2:89765592-89765611 None:intergenic 50.0%
! CCTGGTAACAATGGTGGTGA+TGG - chr3_2:89765589-89765608 Msa0436300:intron 50.0%
ACCAAAGTGATGCAGGTGAC+GGG + chr3_2:89765626-89765645 None:intergenic 50.0%
! CGCTTTGGGTAACAGACCAA+AGG + chr3_2:89765655-89765674 None:intergenic 50.0%
ACCCAGCATATAGAGGCTTG+GGG + chr3_2:89765681-89765700 None:intergenic 50.0%
TCTTCAACATGCCACCCAGA+AGG + chr3_2:89766323-89766342 None:intergenic 50.0%
TTCTGGGTGGCATGTTGAAG+AGG - chr3_2:89766322-89766341 Msa0436300:intron 50.0%
TCTGGGTGGCATGTTGAAGA+GGG - chr3_2:89766323-89766342 Msa0436300:intron 50.0%
CTACCAACAGGGAAGAGGAA+GGG + chr3_2:89766815-89766834 None:intergenic 50.0%
ACTACCAACAGGGAAGAGGA+AGG + chr3_2:89766816-89766835 None:intergenic 50.0%
CTACCAACAGGGAAGAGGAA+GGG + chr3_2:89766815-89766834 None:intergenic 50.0%
TCTACCAACAGGGAAGAGGA+AGG + chr3_2:89766952-89766971 None:intergenic 50.0%
!! GCTATGGCCTTGTCAACTGT+AGG - chr3_2:89767137-89767156 Msa0436300:intron 50.0%
! GGCCTTGTCAACTGTAGGAA+AGG - chr3_2:89767142-89767161 Msa0436300:intron 50.0%
CAGGTCTACTAGACTAGGTC+TGG + chr3_2:89767282-89767301 None:intergenic 50.0%
ACGAGGAAACTCCTTGTAGG+GGG - chr3_2:89767439-89767458 Msa0436300:intron 50.0%
ATCACAAGGTTCCCCCTACA+AGG + chr3_2:89767453-89767472 None:intergenic 50.0%
!! TGTGGGGGTGTCTCTTCTTA+CGG - chr3_2:89767707-89767726 Msa0436300:intron 50.0%
!! AGGAGTATCGTGTCTTCTCC+AGG - chr3_2:89768257-89768276 Msa0436300:intron 50.0%
!! GGAGTATCGTGTCTTCTCCA+GGG - chr3_2:89768258-89768277 Msa0436300:intron 50.0%
!! AAACGGGTTACGGGTTAGAC+GGG - chr3_2:89768361-89768380 Msa0436300:intron 50.0%
GGTTTGATGTTTAGGCCCGT+TGG - chr3_2:89768423-89768442 Msa0436300:intron 50.0%
ATACATGGTCGGGTTCCTTC+GGG + chr3_2:89768451-89768470 None:intergenic 50.0%
GATGAGTGAGAGTGAGAGTG+AGG + chr3_2:89768601-89768620 None:intergenic 50.0%
GGTTCGGGTAAAAACGGTTC+GGG + chr3_2:89768926-89768945 None:intergenic 50.0%
GGGTTCGGGTAAAAACGGTT+CGG + chr3_2:89768927-89768946 None:intergenic 50.0%
TTTACCCGAACCCGAACAAC+CGG - chr3_2:89768934-89768953 Msa0436300:intron 50.0%
! ATTACCGGTTGTTCGGGTTC+GGG + chr3_2:89768941-89768960 None:intergenic 50.0%
CATTATGGCATGCTGTGGCT+AGG + chr3_2:89769020-89769039 None:intergenic 50.0%
TGCAGCAAGCTGCACATATG+AGG + chr3_2:89769175-89769194 None:intergenic 50.0%
AGAGGTGATAAGGTTCCCCA+TGG + chr3_2:89769574-89769593 None:intergenic 50.0%
GGGTCCTGAAGGTCTTGATT+TGG - chr3_2:89769644-89769663 Msa0436300:intron 50.0%
CGTCCTAGAGGTAGTCAGAT+TGG - chr3_2:89770669-89770688 Msa0436300:intron 50.0%
GCTCCAATCTGACTACCTCT+AGG + chr3_2:89770675-89770694 None:intergenic 50.0%
TGGAGCAATAGTCAGCAAGC+AGG - chr3_2:89770689-89770708 Msa0436300:CDS 50.0%
AGAGTTCTGTAGTGCCTGGT+AGG - chr3_2:89770788-89770807 Msa0436300:intron 50.0%
GCTCTTTGTACTGCTCGTGA+AGG + chr3_2:89770819-89770838 None:intergenic 50.0%
TCACGAGCAGTACAAAGAGC+TGG - chr3_2:89770819-89770838 Msa0436300:intron 50.0%
AATCTCGCTTGCATGACAGG+TGG - chr3_2:89771120-89771139 Msa0436300:intron 50.0%
GTGTGATGAGTTTACCCCAC+CGG - chr3_2:89771746-89771765 Msa0436300:five_prime_UTR 50.0%
!! CTTCAGCGTCGACCAACTCA+TGG - chr3_2:89765153-89765172 Msa0436300:intron 55.0%
!! CAATGGTGGTGATGGTCTGG+TGG - chr3_2:89765597-89765616 Msa0436300:intron 55.0%
ACCCCCAAGCCTCTATATGC+TGG - chr3_2:89765676-89765695 Msa0436300:intron 55.0%
CCCAGCATATAGAGGCTTGG+GGG + chr3_2:89765680-89765699 None:intergenic 55.0%
CCCCCAAGCCTCTATATGCT+GGG - chr3_2:89765677-89765696 Msa0436300:intron 55.0%
GTCGATCCCTTTCTTGTCGG+TGG - chr3_2:89765833-89765852 Msa0436300:intron 55.0%
!! GAGGGAGATGTTGATGGCAC+AGG - chr3_2:89766341-89766360 Msa0436300:intron 55.0%
!!! GGCCCTCACCACTTTTTAGG+AGG - chr3_2:89766568-89766587 Msa0436300:intron 55.0%
CGGACACACATGGATGTTCC+AGG + chr3_2:89766649-89766668 None:intergenic 55.0%
GGAGGCAGACCCCATTAATC+AGG - chr3_2:89766747-89766766 Msa0436300:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - chr3_2:89766809-89766828 Msa0436300:intron 55.0%
TTGCCCTTCCTCTTCCCTGT+TGG - chr3_2:89766809-89766828 Msa0436300:intron 55.0%
!! TGCGTTGGCTGCGAGTTTGA+AGG - chr3_2:89767106-89767125 Msa0436300:intron 55.0%
GTAGGGGGAACCTTGTGATC+TGG - chr3_2:89767454-89767473 Msa0436300:intron 55.0%
TAGGGGTAAACCCTGTGTGC+TGG - chr3_2:89767763-89767782 Msa0436300:intron 55.0%
CAACTGGCTGCAGCTCATCA+CGG - chr3_2:89767921-89767940 Msa0436300:intron 55.0%
TCCAGGGAAGCTAATGCCAC+AGG - chr3_2:89768274-89768293 Msa0436300:intron 55.0%
GGAAGCTAATGCCACAGGCT+GGG - chr3_2:89768279-89768298 Msa0436300:intron 55.0%
TGCCACAGGCTGGGCAAATA+CGG - chr3_2:89768288-89768307 Msa0436300:intron 55.0%
AGTGAGAGTGAGAGTGAGGG+AGG + chr3_2:89768597-89768616 None:intergenic 55.0%
AAATAGGCCTACCCGTGGGT+TGG - chr3_2:89768967-89768986 Msa0436300:intron 55.0%
ATGGCATGCTGTGGCTAGGT+GGG + chr3_2:89769016-89769035 None:intergenic 55.0%
TATGGCATGCTGTGGCTAGG+TGG + chr3_2:89769017-89769036 None:intergenic 55.0%
GAATTAGGGTGGCAGGCTAC+TGG - chr3_2:89769330-89769349 Msa0436300:intron 55.0%
! AGATTCGGTTGGGGTCCTGA+AGG - chr3_2:89769633-89769652 Msa0436300:intron 55.0%
GTGCTAGCAACACACTCTCG+TGG + chr3_2:89770060-89770079 None:intergenic 55.0%
!! GACTACCTCTAGGACGGCTA+TGG + chr3_2:89770665-89770684 None:intergenic 55.0%
TCGTGAAGGACATGCCTACC+AGG + chr3_2:89770805-89770824 None:intergenic 55.0%
TTCTGTTACTCCCCTTGGCC+TGG - chr3_2:89770911-89770930 Msa0436300:CDS 55.0%
ATGTCCGAAGTCCAGGCCAA+GGG + chr3_2:89770925-89770944 None:intergenic 55.0%
GCTATGGAAGGTTGAGCGGT+TGG - chr3_2:89771708-89771727 Msa0436300:five_prime_UTR 55.0%
TGGTCGACGCTGAAGCCAAG+AGG + chr3_2:89765148-89765167 None:intergenic 60.0%
GCCCGTCACCTGCATCACTT+TGG - chr3_2:89765622-89765641 Msa0436300:intron 60.0%
! GAGGCTTGGGGGTACGCTTT+GGG + chr3_2:89765669-89765688 None:intergenic 60.0%
! AGAGGCTTGGGGGTACGCTT+TGG + chr3_2:89765670-89765689 None:intergenic 60.0%
AAGGGAGGCCTTGGAGAACC+TGG + chr3_2:89766212-89766231 None:intergenic 60.0%
!!! GGCGGCCCTCACCACTTTTT+AGG - chr3_2:89766565-89766584 Msa0436300:intron 60.0%
TAATGGGGTCTGCCTCCACC+TGG + chr3_2:89766744-89766763 None:intergenic 60.0%
! GCCTGTGGCATTAGCTTCCC+TGG + chr3_2:89768278-89768297 None:intergenic 60.0%
GGGAAGCTAATGCCACAGGC+TGG - chr3_2:89768278-89768297 Msa0436300:intron 60.0%
GCCACAGGCTGGGCAAATAC+GGG - chr3_2:89768289-89768308 Msa0436300:intron 60.0%
ACCCGTATTTGCCCAGCCTG+TGG + chr3_2:89768293-89768312 None:intergenic 60.0%
TTAGGCCCGTTGGAACCCGA+AGG - chr3_2:89768433-89768452 Msa0436300:CDS 60.0%
! GGGTTCCTTCGGGTTCCAAC+GGG + chr3_2:89768441-89768460 None:intergenic 60.0%
! CGGGTTCCTTCGGGTTCCAA+CGG + chr3_2:89768442-89768461 None:intergenic 60.0%
GAGAGTGAGGGAGGCAGCTA+GGG + chr3_2:89768588-89768607 None:intergenic 60.0%
TGAGAGTGAGGGAGGCAGCT+AGG + chr3_2:89768589-89768608 None:intergenic 60.0%
! TTCGGGTTCGAGCCAACCCA+CGG + chr3_2:89768982-89769001 None:intergenic 60.0%
!! AGGTGGGCATCGGTTCGGTT+CGG + chr3_2:89769000-89769019 None:intergenic 60.0%
!! TGGCTAGGTGGGCATCGGTT+CGG + chr3_2:89769005-89769024 None:intergenic 60.0%
TGCTGTGGCTAGGTGGGCAT+CGG + chr3_2:89769010-89769029 None:intergenic 60.0%
ACTCCCCTTGGCCTGGACTT+CGG - chr3_2:89770918-89770937 Msa0436300:CDS 60.0%
TGTCCGAAGTCCAGGCCAAG+GGG + chr3_2:89770924-89770943 None:intergenic 60.0%
GATGTCCGAAGTCCAGGCCA+AGG + chr3_2:89770926-89770945 None:intergenic 60.0%
GTTCGAGCCAACCCACGGGT+AGG + chr3_2:89768977-89768996 None:intergenic 65.0%
TCGGGTTCGAGCCAACCCAC+GGG + chr3_2:89768981-89769000 None:intergenic 65.0%
!! GGTGGGCATCGGTTCGGTTC+GGG + chr3_2:89768999-89769018 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 89764623 89771979 89764623 ID=Msa0436300;Name=Msa0436300
chr3_2 mRNA 89764623 89771979 89764623 ID=Msa0436300-mRNA-1;Parent=Msa0436300;Name=Msa0436300-mRNA-1;_AED=0.17;_eAED=0.17;_QI=370|1|1|1|0.92|0.85|14|241|467
chr3_2 exon 89764623 89764930 89764623 ID=Msa0436300-mRNA-1:exon:26710;Parent=Msa0436300-mRNA-1
chr3_2 exon 89765464 89765559 89765464 ID=Msa0436300-mRNA-1:exon:26709;Parent=Msa0436300-mRNA-1
chr3_2 exon 89765742 89765812 89765742 ID=Msa0436300-mRNA-1:exon:26708;Parent=Msa0436300-mRNA-1
chr3_2 exon 89765892 89765996 89765892 ID=Msa0436300-mRNA-1:exon:26707;Parent=Msa0436300-mRNA-1
chr3_2 exon 89768431 89768521 89768431 ID=Msa0436300-mRNA-1:exon:26706;Parent=Msa0436300-mRNA-1
chr3_2 exon 89768618 89768668 89768618 ID=Msa0436300-mRNA-1:exon:26705;Parent=Msa0436300-mRNA-1
chr3_2 exon 89769428 89769516 89769428 ID=Msa0436300-mRNA-1:exon:26704;Parent=Msa0436300-mRNA-1
chr3_2 exon 89769834 89770076 89769834 ID=Msa0436300-mRNA-1:exon:26703;Parent=Msa0436300-mRNA-1
chr3_2 exon 89770220 89770389 89770220 ID=Msa0436300-mRNA-1:exon:26702;Parent=Msa0436300-mRNA-1
chr3_2 exon 89770675 89770780 89770675 ID=Msa0436300-mRNA-1:exon:26701;Parent=Msa0436300-mRNA-1
chr3_2 exon 89770891 89771058 89770891 ID=Msa0436300-mRNA-1:exon:26700;Parent=Msa0436300-mRNA-1
chr3_2 exon 89771304 89771342 89771304 ID=Msa0436300-mRNA-1:exon:26699;Parent=Msa0436300-mRNA-1
chr3_2 exon 89771428 89771597 89771428 ID=Msa0436300-mRNA-1:exon:26698;Parent=Msa0436300-mRNA-1
chr3_2 exon 89771672 89771979 89771672 ID=Msa0436300-mRNA-1:exon:26697;Parent=Msa0436300-mRNA-1
chr3_2 five_prime_UTR 89771672 89771979 89771672 ID=Msa0436300-mRNA-1:five_prime_utr;Parent=Msa0436300-mRNA-1
chr3_2 five_prime_UTR 89771536 89771597 89771536 ID=Msa0436300-mRNA-1:five_prime_utr;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89771428 89771535 89771428 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89771304 89771342 89771304 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89770891 89771058 89770891 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89770675 89770780 89770675 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89770220 89770389 89770220 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89769834 89770076 89769834 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89769428 89769516 89769428 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89768618 89768668 89768618 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89768431 89768521 89768431 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89765892 89765996 89765892 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89765742 89765812 89765742 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89765464 89765559 89765464 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 CDS 89764864 89764930 89764864 ID=Msa0436300-mRNA-1:cds;Parent=Msa0436300-mRNA-1
chr3_2 three_prime_UTR 89764623 89764863 89764623 ID=Msa0436300-mRNA-1:three_prime_utr;Parent=Msa0436300-mRNA-1
Gene Sequence

>Msa0436300

ATGTCCAATTTCGATTCCGACTCAGTCACTTACCTCAAACAACAAGAAGCTGTTGAGATTGATGAAACTCTCATGGGTCCTCTTGGCTTCAGCGTCGACCAACTCATGGAATTGGCTGGTTTGAGCGTCGCTACTTCCATATATGAGGTTTACAAACCAGGCGAGTATAGTCGTGTTCTTACTATATGTGGTCCTGGTAACAATGGTGGTGATGGTCTGGTGGCTGCCCGTCACCTGCATCACTTTGGTTATAAGCCTTTGGTCTGTTACCCAAAGCGTACCCCCAAGCCTCTATATGCTGGGTTAGTTACTCAGCTTGAAGCATTGTCGATCCCTTTCTTGTCGGTGGAAGATCTACCATCAGATTTCTCCAAGGACTTTGACATTCTAGTAGATGCCATGTTTGGATTCTCATTTCATGGTTCTCCAAGGCCTCCCTTTGATGATTTGATCCAAAGATTTATTTCTTTTCGTAATAATCATAATCAAATTGGCCAAAAAAGACCGGTTATAGTCTCTGTAGATATTCCTTCTGGGTGGCATGTTGAAGAGGGAGATGTTGATGGCACAGGAATTAAACCTGATATGTTGATCTCTTTGACCGCGCCAAAATTCTGTGCAAAGAAGTTTGGCGGCCCTCACCACTTTTTAGGAGGTAGATTTGTCCCACCTGCTATTGCTGAAAAGTATAAGCTTATACTTCCACCATATCCTGGAACATCCATGTGTGTCCGAATTGGAAAGCCTCCTCAAATCGATATTTCAGCTCTACGAGAGAACTATATCTCTCCAGAATTTCTTGAAGACCAGGTGGAGGCAGACCCCATTAATCAGTTCCGTAAATGGTTTGATGATGCGTTGGCTGCGAGTTTGAAGGAACCAAATGCTATGGCCTTGTCAACTGTAGGAAAGGATGGAAAACCCTCATCACGGATCGTATTGCTAAAAGGCTTTGACAAGGATGGATTTGTGTGGTTCACAAACTATGAAAGTCAAAAGGGACGTGCGTTATCTGAAAATCCACATGCATCAATTCTTTTTTATTGGGATGGTTTAAACCGACAGGTACGTGTGGAGGGGTATGTTCAGAAAGTTTCTGATGAGGAATCAGAACAGTATTTCCATAGCCGTCCTAGAGGTAGTCAGATTGGAGCAATAGTCAGCAAGCAGAGTTCTGTAGTGCCTGGTAGGCATGTCCTTCACGAGCAGTACAAAGAGCTGGAACAAAAATATGCTGATGGAAGTGTGATCCCTAAACCTAAAAACTGGGGAGGATACAGGCTAACACCAAATCTTTTTGAATTTTGGCAAGGACAGAAATCTCGCTTGCATGACAGGTTGCAATACGTTCCCCATGAGATAGATGGAAAAAAGCTATGGAAGGTTGAGCGGTTGGCTCCCTGA

Protein sequence

>Msa0436300

MSNFDSDSVTYLKQQEAVEIDETLMGPLGFSVDQLMELAGLSVATSIYEVYKPGEYSRVLTICGPGNNGGDGLVAARHLHHFGYKPLVCYPKRTPKPLYAGLVTQLEALSIPFLSVEDLPSDFSKDFDILVDAMFGFSFHGSPRPPFDDLIQRFISFRNNHNQIGQKRPVIVSVDIPSGWHVEEGDVDGTGIKPDMLISLTAPKFCAKKFGGPHHFLGGRFVPPAIAEKYKLILPPYPGTSMCVRIGKPPQIDISALRENYISPEFLEDQVEADPINQFRKWFDDALAASLKEPNAMALSTVGKDGKPSSRIVLLKGFDKDGFVWFTNYESQKGRALSENPHASILFYWDGLNRQVRVEGYVQKVSDEESEQYFHSRPRGSQIGAIVSKQSSVVPGRHVLHEQYKELEQKYADGSVIPKPKNWGGYRLTPNLFEFWQGQKSRLHDRLQYVPHEIDGKKLWKVERLAP*