AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0665910

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0665910 MtrunA17_Chr4g0032531 97.541 122 3 0 274 395 388 509 7.66e-21 94.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 197 sgRNAs with CRISPR-Local

Find 406 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGGAGATTTATAGTTATA+TGG 0.249249 4_4:+5784330 None:intergenic
GGAGGTTTATAGTAATTATA+TGG 0.261517 4_4:+5784285 None:intergenic
AATTATATGGAGGGAATTTA+TGG 0.264497 4_4:+5784451 None:intergenic
GGTGGGGATTTATAGTTATA+TGG 0.293465 4_4:+5784483 None:intergenic
GGAGATTTATAGTAATTATA+TGG 0.296045 4_4:+5784438 None:intergenic
CTATATTGGTAGGGATTATA+TGG 0.299199 4_4:+5783577 None:intergenic
GGAGATTGATAGTTATTATA+TGG 0.306941 4_4:+5784576 None:intergenic
GGTTGTGGATAGTTGTAGTA+TGG 0.308504 4_4:+5784633 None:intergenic
GGTATAGGTTTGTAGTAGTA+TGG 0.310510 4_4:+5783703 None:intergenic
GGTGGTGATTTGTAGATATA+TGG 0.318160 4_4:+5784072 None:intergenic
GGTGGTGAGGGAGATGGTGG+AGG 0.324736 4_4:+5783898 None:intergenic
GGTGGAGATTGATAGTTATA+TGG 0.333651 4_4:+5784528 None:intergenic
GGTGGTGAAGGTGAGGGAGG+AGG 0.336423 4_4:+5783730 None:intergenic
GGTGGAGATTTGTAGTAATA+TGG 0.337208 4_4:+5784222 None:intergenic
GGTGGGGATTTATAGATATA+TGG 0.342032 4_4:+5783655 None:intergenic
GGAGGTGGTGAAGGTGAGGG+AGG 0.344859 4_4:+5783727 None:intergenic
GATGGTGGTGTTGTTGGTTG+TGG 0.353708 4_4:+5784618 None:intergenic
GCTGATGATAAACCTTACTA+TGG 0.356401 4_4:-5784666 Msa0665910:CDS
AAACGTAAGGTGGTGGTGGC+GGG 0.362159 4_4:+5783764 None:intergenic
GGTGAGGGAGATGGTGGAGG+AGG 0.372903 4_4:+5783901 None:intergenic
GGAGGAGATTTGTGTTCATA+TGG 0.373239 4_4:+5784504 None:intergenic
GGTGAAGGTGAGGGAGGAGG+AGG 0.376677 4_4:+5783733 None:intergenic
GGAGGGAATTTGTGTTCATA+TGG 0.389091 4_4:+5784351 None:intergenic
TCATAAGGAGGAGGTGGTGA+TGG 0.395214 4_4:+5784258 None:intergenic
AATTATATGGAGGGAACTTA+TGG 0.400950 4_4:+5784298 None:intergenic
GGTGATGGAGATGGTGGTGG+TGG 0.401628 4_4:+5784204 None:intergenic
GGTGGCGACTTGTAGATATA+TGG 0.402233 4_4:+5783970 None:intergenic
GGAGGGAATTTGTAGGCATA+TGG 0.405038 4_4:+5784549 None:intergenic
GGTGATGGTGGAGGAGGAGA+TGG 0.408246 4_4:+5784102 None:intergenic
GTTATATGGAGGGAATTTGT+AGG 0.409850 4_4:+5784542 None:intergenic
AATGGAGGTGGTGGTGATGG+TGG 0.418375 4_4:+5784414 None:intergenic
TAAGGAGGAGGTGGTGATGG+GGG 0.420773 4_4:+5784261 None:intergenic
TAAACATAGGGAGCGGGTGG+TGG 0.422955 4_4:+5783637 None:intergenic
ATTGTATGGAGGGAATTTGT+AGG 0.423088 4_4:+5784389 None:intergenic
GGAGGTGGTGATGGTGGAGG+AGG 0.425914 4_4:+5783994 None:intergenic
GGAGGTGGTGATGGTGGAGG+AGG 0.425914 4_4:+5784096 None:intergenic
TAGTAAGATGGTGGTGTTGT+TGG 0.427537 4_4:+5784612 None:intergenic
TGGAGGAGGTGGTGAAGGTG+AGG 0.428551 4_4:+5783723 None:intergenic
GCAAATGGAGGTGGTGGTGA+TGG 0.429453 4_4:+5784411 None:intergenic
GGTTGTTGACCTCCATAGTA+AGG 0.430752 4_4:+5784654 None:intergenic
TAAACATAAGGTGGAGGAGG+TGG 0.433260 4_4:+5784126 None:intergenic
TAAACGTAAGGTGGTGGTGG+CGG 0.436782 4_4:+5783763 None:intergenic
CATAAGGAGGAGGTGGTGAT+GGG 0.438644 4_4:+5784259 None:intergenic
GGTGATGGTGGAGGAGGAGA+CGG 0.442597 4_4:+5784000 None:intergenic
GGAGGTGGTGGTGATGGTGG+TGG 0.443148 4_4:+5784417 None:intergenic
GGAGGAGACTTGTAGACATA+TGG 0.443592 4_4:+5783919 None:intergenic
GGTGGTGATGGAGATGGTGG+TGG 0.445006 4_4:+5784201 None:intergenic
ACATAAGGAGGTGGTGGTGA+TGG 0.447109 4_4:+5784189 None:intergenic
GGTGGGGTGTACACATATGG+TGG 0.452259 4_4:+5783943 None:intergenic
GGTGGTAATTTGTAATCATA+AGG 0.457212 4_4:+5784243 None:intergenic
GGAGGGAATTTGTAGGCAAA+TGG 0.459511 4_4:+5784396 None:intergenic
GGAGGTGATTGGTAAACATA+TGG 0.460889 4_4:+5783811 None:intergenic
GGAGGGAATTTATGGTCATA+TGG 0.464560 4_4:+5784459 None:intergenic
TATGGAGGAGGTGGTGATGG+TGG 0.469157 4_4:+5783988 None:intergenic
TATGGAGGAGGTGGTGATGG+TGG 0.469157 4_4:+5784090 None:intergenic
GGTGGTGATTTATAAACATA+AGG 0.469614 4_4:+5784174 None:intergenic
AAACATAGGGAGCGGGTGGT+GGG 0.470312 4_4:+5783638 None:intergenic
GGTGGTGACTTGTACACATA+TGG 0.470786 4_4:+5784144 None:intergenic
GGGGTGGAGGTGAACTATAT+TGG 0.471826 4_4:+5783563 None:intergenic
TAGACATATGGTGGAGGAGG+AGG 0.472397 4_4:+5783793 None:intergenic
GTGATGGTGGAGGAGGAGAC+GGG 0.478976 4_4:+5784001 None:intergenic
GGAGGGAACTTATGGTCATA+TGG 0.480058 4_4:+5784306 None:intergenic
GGTGGTGGTGATGGAGATGG+TGG 0.480813 4_4:+5784198 None:intergenic
GGTGGAGATTGATAATTGTA+TGG 0.482212 4_4:+5784375 None:intergenic
TAAACATAAGGTGGAGGAGG+TGG 0.483556 4_4:+5784024 None:intergenic
GGAGGAGACGGGTAAACATA+AGG 0.491395 4_4:+5784012 None:intergenic
GGAGGTGGGGTGTACACATA+TGG 0.491916 4_4:+5783940 None:intergenic
GGAGGAGGTGGTGATGGTGG+AGG 0.497577 4_4:+5783991 None:intergenic
GGAGGAGGTGGTGATGGTGG+AGG 0.497577 4_4:+5784093 None:intergenic
TTGTAGACATATGGTGGAGG+AGG 0.499205 4_4:+5783790 None:intergenic
GGAGGAGGTGGTGAAGGTGA+GGG 0.500904 4_4:+5783724 None:intergenic
GGTGGAGACTCATAAACATA+TGG 0.501566 4_4:+5783676 None:intergenic
GGGTAAACATAAGGTGGAGG+AGG 0.502221 4_4:+5784123 None:intergenic
GGTGGTGACTTATACACATA+TGG 0.502897 4_4:+5784042 None:intergenic
GGCGGTGATTTGTAGACATA+TGG 0.506849 4_4:+5783841 None:intergenic
GGCGGGGATTTGTAGACATA+TGG 0.509362 4_4:+5783781 None:intergenic
TAGTATGGAGGAGGTGGTGA+AGG 0.509622 4_4:+5783718 None:intergenic
GGAGATTGATAGTTATATGG+AGG 0.511609 4_4:+5784531 None:intergenic
ATGGTGGAGGAGGAGGTGAT+TGG 0.513467 4_4:+5783800 None:intergenic
GGAGATTTATAGTTATATGG+AGG 0.518535 4_4:+5784333 None:intergenic
TTGTAGTAGTATGGAGGAGG+TGG 0.519186 4_4:+5783712 None:intergenic
GAGATTGATAATTGTATGGA+GGG 0.520202 4_4:+5784379 None:intergenic
GGAGATTGATAATTGTATGG+AGG 0.524012 4_4:+5784378 None:intergenic
TTTATGGTCATATGGAGGTG+GGG 0.525992 4_4:+5784467 None:intergenic
GGAGGTGGTGGTGATGGAGA+TGG 0.526346 4_4:+5784195 None:intergenic
AATTTGTAGGCAAATGGAGG+TGG 0.527202 4_4:+5784402 None:intergenic
GGAGGAGATGGGTAAACATA+AGG 0.528636 4_4:+5784114 None:intergenic
TACACATATGGAGGAGGTGG+TGG 0.530889 4_4:+5784054 None:intergenic
GGTTTGTAGTAGTATGGAGG+AGG 0.531135 4_4:+5783709 None:intergenic
AACGTAAGGTGGTGGTGGCG+GGG 0.535120 4_4:+5783765 None:intergenic
ATATATGGAGGAGGTGGTGA+TGG 0.535274 4_4:+5783985 None:intergenic
ATATATGGAGGAGGTGGTGA+TGG 0.535274 4_4:+5784087 None:intergenic
TTGTAATCATAAGGAGGAGG+TGG 0.535597 4_4:+5784252 None:intergenic
GTGATGGTGGAGGAGGAGAT+GGG 0.536395 4_4:+5784103 None:intergenic
AGGAGGAGATTTATAAACAT+AGG 0.537905 4_4:+5783624 None:intergenic
ATTTATGGTCATATGGAGGT+GGG 0.539136 4_4:+5784466 None:intergenic
GGAGGAGATTTATAAACATA+GGG 0.539149 4_4:+5783625 None:intergenic
TGGTAAACATATGGAGGAGG+TGG 0.540227 4_4:+5783820 None:intergenic
GGGAATTTGTAGGCAAATGG+AGG 0.540571 4_4:+5784399 None:intergenic
AGGGATTATATGGTGTAGGT+GGG 0.543953 4_4:+5783587 None:intergenic
AGATTTATAAACATAGGGAG+CGG 0.544758 4_4:+5783630 None:intergenic
GACTTGTAGACATATGGAGG+TGG 0.545786 4_4:+5783925 None:intergenic
TTGTAGACATATGGTGGTGG+AGG 0.546239 4_4:+5783850 None:intergenic
TTATAAACATAAGGAGGTGG+TGG 0.546381 4_4:+5784183 None:intergenic
TGGGGTGTACACATATGGTG+GGG 0.547782 4_4:+5783945 None:intergenic
TAGACATATGGTGGTGGAGG+TGG 0.548151 4_4:+5783853 None:intergenic
TTGTAGGCAAATGGAGGTGG+TGG 0.549810 4_4:+5784405 None:intergenic
GGGGATTTATAGATATATGG+TGG 0.550411 4_4:+5783658 None:intergenic
AATTTATGGTCATATGGAGG+TGG 0.550538 4_4:+5784465 None:intergenic
ATAAGGAGGAGGTGGTGATG+GGG 0.551230 4_4:+5784260 None:intergenic
GGGGATTTATAGTTATATGG+AGG 0.551704 4_4:+5784486 None:intergenic
GGAGATGGGTAAACATAAGG+TGG 0.552660 4_4:+5784117 None:intergenic
GGGAATTTGTGTTCATATGG+AGG 0.553986 4_4:+5784354 None:intergenic
AACATAGGGAGCGGGTGGTG+GGG 0.555364 4_4:+5783639 None:intergenic
GGTTTATAGTAATTATATGG+AGG 0.555401 4_4:+5784288 None:intergenic
GATTTATAGTAATTATATGG+AGG 0.555401 4_4:+5784441 None:intergenic
GGTGGGGATTTGTAAACGTA+AGG 0.555641 4_4:+5783604 None:intergenic
CGACTTGTATACATATGGTG+GGG 0.556222 4_4:+5783876 None:intergenic
GCGACTTGTATACATATGGT+GGG 0.558490 4_4:+5783875 None:intergenic
AACTTATGGTCATATGGTGG+TGG 0.559465 4_4:+5784312 None:intergenic
TAGGGATTATATGGTGTAGG+TGG 0.560028 4_4:+5783586 None:intergenic
ATAGGTTTGTAGTAGTATGG+AGG 0.563225 4_4:+5783706 None:intergenic
TGATAGTTATTATATGGCGG+TGG 0.565688 4_4:+5784582 None:intergenic
TAAACATATGGAGGAGGTGG+CGG 0.566001 4_4:+5783823 None:intergenic
GATTTATAAACATAGGGAGC+GGG 0.566605 4_4:+5783631 None:intergenic
TGGAGGTGAACTATATTGGT+AGG 0.567281 4_4:+5783567 None:intergenic
AATTTGTGTTCATATGGAGG+TGG 0.570203 4_4:+5784357 None:intergenic
GATTTGTGTTCATATGGAGG+TGG 0.570203 4_4:+5784510 None:intergenic
TACACATATGGAGGAGGTGG+TGG 0.571566 4_4:+5784156 None:intergenic
TTGTAGATATATGGAGGAGG+TGG 0.572321 4_4:+5784081 None:intergenic
TTGTAGATATATGGAGGAGG+TGG 0.572584 4_4:+5783979 None:intergenic
TCATAAACGTAAGGTGGTGG+TGG 0.572628 4_4:+5783760 None:intergenic
TGGTAGGGATTATATGGTGT+AGG 0.574481 4_4:+5783583 None:intergenic
GATGGGTAAACATAAGGTGG+AGG 0.574609 4_4:+5784120 None:intergenic
GGGTAAACATAAGGTGGAGG+AGG 0.574813 4_4:+5784021 None:intergenic
GGGAATTTGTAGGCATATGG+AGG 0.574954 4_4:+5784552 None:intergenic
AATTTGTAGGCATATGGAGG+TGG 0.577635 4_4:+5784555 None:intergenic
ATGAGTCGAGGCAAGTGCCT+CGG 0.578931 4_4:+5784735 None:intergenic
GAGATTGATAGTTATATGGA+GGG 0.580673 4_4:+5784532 None:intergenic
GTTTATAGTAATTATATGGA+GGG 0.581924 4_4:+5784289 None:intergenic
ATTTATAGTAATTATATGGA+GGG 0.581924 4_4:+5784442 None:intergenic
TTATACACATATGGAGGAGG+TGG 0.581964 4_4:+5784051 None:intergenic
GGGGTGTACACATATGGTGG+GGG 0.582258 4_4:+5783946 None:intergenic
GGTAATTTGTAATCATAAGG+AGG 0.582323 4_4:+5784246 None:intergenic
GACTCATAAACGTAAGGTGG+TGG 0.583157 4_4:+5783757 None:intergenic
GTGGGGTGTACACATATGGT+GGG 0.584835 4_4:+5783944 None:intergenic
GGCGACTTGTATACATATGG+TGG 0.585132 4_4:+5783874 None:intergenic
GGAGACTCATAAACATATGG+AGG 0.586175 4_4:+5783679 None:intergenic
GAGATTTATAGTTATATGGA+GGG 0.587615 4_4:+5784334 None:intergenic
GGTGGCGACTTGTATACATA+TGG 0.588015 4_4:+5783871 None:intergenic
ACTTGTAGACATATGGAGGT+GGG 0.588475 4_4:+5783926 None:intergenic
GACTCATAAACATATGGAGG+GGG 0.589211 4_4:+5783682 None:intergenic
GATTTATAAACATAAGGAGG+TGG 0.594636 4_4:+5784180 None:intergenic
GACGGGTAAACATAAGGTGG+AGG 0.599703 4_4:+5784018 None:intergenic
GGTGATTTATAAACATAAGG+AGG 0.600458 4_4:+5784177 None:intergenic
GGGGATTTGTAAACGTAAGG+AGG 0.604036 4_4:+5783607 None:intergenic
GGTGGTTTGTAATAGTAAGA+TGG 0.605809 4_4:+5784600 None:intergenic
CTTGTAGACATATGGAGGTG+GGG 0.605954 4_4:+5783927 None:intergenic
GACTTATACACATATGGAGG+AGG 0.606467 4_4:+5784048 None:intergenic
GGTGATTGGTAAACATATGG+AGG 0.606742 4_4:+5783814 None:intergenic
GACTTGTATACATATGGTGG+GGG 0.607745 4_4:+5783877 None:intergenic
GATTGGTAAACATATGGAGG+AGG 0.609714 4_4:+5783817 None:intergenic
TGACATCAAGCTTAATACAC+AGG 0.610029 4_4:+5783541 None:intergenic
GATTGATAGTTATTATATGG+CGG 0.610237 4_4:+5784579 None:intergenic
GGAGGTGACTCATAAACGTA+AGG 0.611951 4_4:+5783751 None:intergenic
GATGATAAACCTTACTATGG+AGG 0.614169 4_4:-5784663 Msa0665910:CDS
AATTTGTAATCATAAGGAGG+AGG 0.618191 4_4:+5784249 None:intergenic
GGAGGTGAACTATATTGGTA+GGG 0.619730 4_4:+5783568 None:intergenic
GGAGATTTGTGTTCATATGG+AGG 0.623300 4_4:+5784507 None:intergenic
GACTTGTAGATATATGGAGG+AGG 0.630010 4_4:+5783976 None:intergenic
GAGACTCATAAACATATGGA+GGG 0.632319 4_4:+5783680 None:intergenic
GGTGATTTGTAGATATATGG+AGG 0.637404 4_4:+5784075 None:intergenic
GGAGACGGGTAAACATAAGG+TGG 0.639362 4_4:+5784015 None:intergenic
TTGTACACATATGGAGGAGG+TGG 0.642750 4_4:+5784153 None:intergenic
TTATAAACATAGGGAGCGGG+TGG 0.646723 4_4:+5783634 None:intergenic
GACATCAAGCTTAATACACA+GGG 0.648226 4_4:+5783542 None:intergenic
GGCGACTTGTAGATATATGG+AGG 0.651607 4_4:+5783973 None:intergenic
GATTTGTAGATATATGGAGG+AGG 0.658666 4_4:+5784078 None:intergenic
GGAGATTTGTAGTAATATGG+TGG 0.661098 4_4:+5784225 None:intergenic
GGAGACTTGTAGACATATGG+AGG 0.661316 4_4:+5783922 None:intergenic
GGGAATTTATGGTCATATGG+AGG 0.663254 4_4:+5784462 None:intergenic
GGTGACTCATAAACGTAAGG+TGG 0.663374 4_4:+5783754 None:intergenic
GCTATTGCATACATGAGTCG+AGG 0.666047 4_4:+5784723 None:intergenic
GATTTGTAGACATATGGTGG+AGG 0.666990 4_4:+5783787 None:intergenic
GATTTGTAGACATATGGTGG+TGG 0.669122 4_4:+5783847 None:intergenic
GGGATTATATGGTGTAGGTG+GGG 0.678057 4_4:+5783588 None:intergenic
GGTGACTTGTACACATATGG+AGG 0.680221 4_4:+5784147 None:intergenic
GACTTGTACACATATGGAGG+AGG 0.680732 4_4:+5784150 None:intergenic
TGGGAACATCAATTGAGCCG+AGG 0.681836 4_4:-5784752 Msa0665910:CDS
GGGGATTTGTAGACATATGG+TGG 0.687838 4_4:+5783784 None:intergenic
GGTGACTTATACACATATGG+AGG 0.689627 4_4:+5784045 None:intergenic
AGACTCATAAACATATGGAG+GGG 0.691579 4_4:+5783681 None:intergenic
GGTGATTTGTAGACATATGG+TGG 0.694523 4_4:+5783844 None:intergenic
GGTTTGTAATAGTAAGATGG+TGG 0.696295 4_4:+5784603 None:intergenic
GGGAACTTATGGTCATATGG+TGG 0.699642 4_4:+5784309 None:intergenic
CATCAAGCTTAATACACAGG+GGG 0.727976 4_4:+5783544 None:intergenic
ACATCAAGCTTAATACACAG+GGG 0.792892 4_4:+5783543 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTATAGTAATTATATGGA+GGG + chr4_4:5783866-5783885 None:intergenic 15.0%
!! ATTTATAGTAATTATATGGA+GGG + chr4_4:5783866-5783885 None:intergenic 15.0%
!! GATTTATAGTAATTATATGG+AGG + chr4_4:5783867-5783886 None:intergenic 20.0%
!! GGAGATTTATAGTAATTATA+TGG + chr4_4:5783870-5783889 None:intergenic 20.0%
!! GTTTATAGTAATTATATGGA+GGG + chr4_4:5784019-5784038 None:intergenic 20.0%
!! GATTTATAGTAATTATATGG+AGG + chr4_4:5783867-5783886 None:intergenic 20.0%
!! GGAGATTTATAGTAATTATA+TGG + chr4_4:5783870-5783889 None:intergenic 20.0%
!! GTTTATAGTAATTATATGGA+GGG + chr4_4:5784019-5784038 None:intergenic 20.0%
!! GATTGATAGTTATTATATGG+CGG + chr4_4:5783729-5783748 None:intergenic 25.0%
!! GGAGATTGATAGTTATTATA+TGG + chr4_4:5783732-5783751 None:intergenic 25.0%
! AATTATATGGAGGGAATTTA+TGG + chr4_4:5783857-5783876 None:intergenic 25.0%
! GAGATTTATAGTTATATGGA+GGG + chr4_4:5783974-5783993 None:intergenic 25.0%
! GGTTTATAGTAATTATATGG+AGG + chr4_4:5784020-5784039 None:intergenic 25.0%
! GGAGGTTTATAGTAATTATA+TGG + chr4_4:5784023-5784042 None:intergenic 25.0%
!! GATTGATAGTTATTATATGG+CGG + chr4_4:5783729-5783748 None:intergenic 25.0%
!! GGAGATTGATAGTTATTATA+TGG + chr4_4:5783732-5783751 None:intergenic 25.0%
! AATTATATGGAGGGAATTTA+TGG + chr4_4:5783857-5783876 None:intergenic 25.0%
! GAGATTTATAGTTATATGGA+GGG + chr4_4:5783974-5783993 None:intergenic 25.0%
! GGTTTATAGTAATTATATGG+AGG + chr4_4:5784020-5784039 None:intergenic 25.0%
! GGAGGTTTATAGTAATTATA+TGG + chr4_4:5784023-5784042 None:intergenic 25.0%
! GAGATTGATAGTTATATGGA+GGG + chr4_4:5783776-5783795 None:intergenic 30.0%
! GAGATTGATAATTGTATGGA+GGG + chr4_4:5783929-5783948 None:intergenic 30.0%
GGAGATTTATAGTTATATGG+AGG + chr4_4:5783975-5783994 None:intergenic 30.0%
GGTGGAGATTTATAGTTATA+TGG + chr4_4:5783978-5783997 None:intergenic 30.0%
AATTATATGGAGGGAACTTA+TGG + chr4_4:5784010-5784029 None:intergenic 30.0%
AATTTGTAATCATAAGGAGG+AGG + chr4_4:5784059-5784078 None:intergenic 30.0%
! GGTAATTTGTAATCATAAGG+AGG + chr4_4:5784062-5784081 None:intergenic 30.0%
! GGTGGTAATTTGTAATCATA+AGG + chr4_4:5784065-5784084 None:intergenic 30.0%
GATTTATAAACATAAGGAGG+TGG + chr4_4:5784128-5784147 None:intergenic 30.0%
GGTGATTTATAAACATAAGG+AGG + chr4_4:5784131-5784150 None:intergenic 30.0%
GGTGGTGATTTATAAACATA+AGG + chr4_4:5784134-5784153 None:intergenic 30.0%
AGATTTATAAACATAGGGAG+CGG + chr4_4:5784678-5784697 None:intergenic 30.0%
GGAGGAGATTTATAAACATA+GGG + chr4_4:5784683-5784702 None:intergenic 30.0%
AGGAGGAGATTTATAAACAT+AGG + chr4_4:5784684-5784703 None:intergenic 30.0%
CTATATTGGTAGGGATTATA+TGG + chr4_4:5784731-5784750 None:intergenic 30.0%
! GAGATTGATAGTTATATGGA+GGG + chr4_4:5783776-5783795 None:intergenic 30.0%
! GAGATTGATAATTGTATGGA+GGG + chr4_4:5783929-5783948 None:intergenic 30.0%
GGAGATTTATAGTTATATGG+AGG + chr4_4:5783975-5783994 None:intergenic 30.0%
GGTGGAGATTTATAGTTATA+TGG + chr4_4:5783978-5783997 None:intergenic 30.0%
AATTATATGGAGGGAACTTA+TGG + chr4_4:5784010-5784029 None:intergenic 30.0%
AATTTGTAATCATAAGGAGG+AGG + chr4_4:5784059-5784078 None:intergenic 30.0%
! GGTAATTTGTAATCATAAGG+AGG + chr4_4:5784062-5784081 None:intergenic 30.0%
! GGTGGTAATTTGTAATCATA+AGG + chr4_4:5784065-5784084 None:intergenic 30.0%
GATTTATAAACATAAGGAGG+TGG + chr4_4:5784128-5784147 None:intergenic 30.0%
GGTGATTTATAAACATAAGG+AGG + chr4_4:5784131-5784150 None:intergenic 30.0%
GGTGGTGATTTATAAACATA+AGG + chr4_4:5784134-5784153 None:intergenic 30.0%
AGATTTATAAACATAGGGAG+CGG + chr4_4:5784678-5784697 None:intergenic 30.0%
GGAGGAGATTTATAAACATA+GGG + chr4_4:5784683-5784702 None:intergenic 30.0%
AGGAGGAGATTTATAAACAT+AGG + chr4_4:5784684-5784703 None:intergenic 30.0%
CTATATTGGTAGGGATTATA+TGG + chr4_4:5784731-5784750 None:intergenic 30.0%
GCTGATGATAAACCTTACTA+TGG - chr4_4:5783639-5783658 Msa0665910:CDS 35.0%
GATGATAAACCTTACTATGG+AGG - chr4_4:5783642-5783661 Msa0665910:CDS 35.0%
GGTTTGTAATAGTAAGATGG+TGG + chr4_4:5783705-5783724 None:intergenic 35.0%
! GGTGGTTTGTAATAGTAAGA+TGG + chr4_4:5783708-5783727 None:intergenic 35.0%
TGATAGTTATTATATGGCGG+TGG + chr4_4:5783726-5783745 None:intergenic 35.0%
GTTATATGGAGGGAATTTGT+AGG + chr4_4:5783766-5783785 None:intergenic 35.0%
! GGAGATTGATAGTTATATGG+AGG + chr4_4:5783777-5783796 None:intergenic 35.0%
! GGTGGAGATTGATAGTTATA+TGG + chr4_4:5783780-5783799 None:intergenic 35.0%
GGGGATTTATAGTTATATGG+AGG + chr4_4:5783822-5783841 None:intergenic 35.0%
GGTGGGGATTTATAGTTATA+TGG + chr4_4:5783825-5783844 None:intergenic 35.0%
ATTTATGGTCATATGGAGGT+GGG + chr4_4:5783842-5783861 None:intergenic 35.0%
AATTTATGGTCATATGGAGG+TGG + chr4_4:5783843-5783862 None:intergenic 35.0%
ATTGTATGGAGGGAATTTGT+AGG + chr4_4:5783919-5783938 None:intergenic 35.0%
! GGAGATTGATAATTGTATGG+AGG + chr4_4:5783930-5783949 None:intergenic 35.0%
! GGTGGAGATTGATAATTGTA+TGG + chr4_4:5783933-5783952 None:intergenic 35.0%
AATTTGTGTTCATATGGAGG+TGG + chr4_4:5783951-5783970 None:intergenic 35.0%
GGAGATTTGTAGTAATATGG+TGG + chr4_4:5784083-5784102 None:intergenic 35.0%
GGTGGAGATTTGTAGTAATA+TGG + chr4_4:5784086-5784105 None:intergenic 35.0%
TTATAAACATAAGGAGGTGG+TGG + chr4_4:5784125-5784144 None:intergenic 35.0%
GATTTGTAGATATATGGAGG+AGG + chr4_4:5784230-5784249 None:intergenic 35.0%
! GGTGATTTGTAGATATATGG+AGG + chr4_4:5784233-5784252 None:intergenic 35.0%
! GGTGGTGATTTGTAGATATA+TGG + chr4_4:5784236-5784255 None:intergenic 35.0%
ATAGGTTTGTAGTAGTATGG+AGG + chr4_4:5784602-5784621 None:intergenic 35.0%
GGTATAGGTTTGTAGTAGTA+TGG + chr4_4:5784605-5784624 None:intergenic 35.0%
AGACTCATAAACATATGGAG+GGG + chr4_4:5784627-5784646 None:intergenic 35.0%
GAGACTCATAAACATATGGA+GGG + chr4_4:5784628-5784647 None:intergenic 35.0%
GGGGATTTATAGATATATGG+TGG + chr4_4:5784650-5784669 None:intergenic 35.0%
GGTGGGGATTTATAGATATA+TGG + chr4_4:5784653-5784672 None:intergenic 35.0%
GATTTATAAACATAGGGAGC+GGG + chr4_4:5784677-5784696 None:intergenic 35.0%
GCTGATGATAAACCTTACTA+TGG - chr4_4:5783639-5783658 Msa0665910:CDS 35.0%
GATGATAAACCTTACTATGG+AGG - chr4_4:5783642-5783661 Msa0665910:CDS 35.0%
GGTTTGTAATAGTAAGATGG+TGG + chr4_4:5783705-5783724 None:intergenic 35.0%
! GGTGGTTTGTAATAGTAAGA+TGG + chr4_4:5783708-5783727 None:intergenic 35.0%
TGATAGTTATTATATGGCGG+TGG + chr4_4:5783726-5783745 None:intergenic 35.0%
GTTATATGGAGGGAATTTGT+AGG + chr4_4:5783766-5783785 None:intergenic 35.0%
! GGAGATTGATAGTTATATGG+AGG + chr4_4:5783777-5783796 None:intergenic 35.0%
! GGTGGAGATTGATAGTTATA+TGG + chr4_4:5783780-5783799 None:intergenic 35.0%
GGGGATTTATAGTTATATGG+AGG + chr4_4:5783822-5783841 None:intergenic 35.0%
GGTGGGGATTTATAGTTATA+TGG + chr4_4:5783825-5783844 None:intergenic 35.0%
ATTTATGGTCATATGGAGGT+GGG + chr4_4:5783842-5783861 None:intergenic 35.0%
AATTTATGGTCATATGGAGG+TGG + chr4_4:5783843-5783862 None:intergenic 35.0%
ATTGTATGGAGGGAATTTGT+AGG + chr4_4:5783919-5783938 None:intergenic 35.0%
! GGAGATTGATAATTGTATGG+AGG + chr4_4:5783930-5783949 None:intergenic 35.0%
! GGTGGAGATTGATAATTGTA+TGG + chr4_4:5783933-5783952 None:intergenic 35.0%
AATTTGTGTTCATATGGAGG+TGG + chr4_4:5783951-5783970 None:intergenic 35.0%
GGAGATTTGTAGTAATATGG+TGG + chr4_4:5784083-5784102 None:intergenic 35.0%
GGTGGAGATTTGTAGTAATA+TGG + chr4_4:5784086-5784105 None:intergenic 35.0%
TTATAAACATAAGGAGGTGG+TGG + chr4_4:5784125-5784144 None:intergenic 35.0%
GATTTGTAGATATATGGAGG+AGG + chr4_4:5784230-5784249 None:intergenic 35.0%
! GGTGATTTGTAGATATATGG+AGG + chr4_4:5784233-5784252 None:intergenic 35.0%
! GGTGGTGATTTGTAGATATA+TGG + chr4_4:5784236-5784255 None:intergenic 35.0%
ATAGGTTTGTAGTAGTATGG+AGG + chr4_4:5784602-5784621 None:intergenic 35.0%
GGTATAGGTTTGTAGTAGTA+TGG + chr4_4:5784605-5784624 None:intergenic 35.0%
AGACTCATAAACATATGGAG+GGG + chr4_4:5784627-5784646 None:intergenic 35.0%
GAGACTCATAAACATATGGA+GGG + chr4_4:5784628-5784647 None:intergenic 35.0%
GGGGATTTATAGATATATGG+TGG + chr4_4:5784650-5784669 None:intergenic 35.0%
GGTGGGGATTTATAGATATA+TGG + chr4_4:5784653-5784672 None:intergenic 35.0%
GATTTATAAACATAGGGAGC+GGG + chr4_4:5784677-5784696 None:intergenic 35.0%
GGTTGTGGATAGTTGTAGTA+TGG + chr4_4:5783675-5783694 None:intergenic 40.0%
!! TAGTAAGATGGTGGTGTTGT+TGG + chr4_4:5783696-5783715 None:intergenic 40.0%
AATTTGTAGGCATATGGAGG+TGG + chr4_4:5783753-5783772 None:intergenic 40.0%
GATTTGTGTTCATATGGAGG+TGG + chr4_4:5783798-5783817 None:intergenic 40.0%
GGAGATTTGTGTTCATATGG+AGG + chr4_4:5783801-5783820 None:intergenic 40.0%
GGAGGAGATTTGTGTTCATA+TGG + chr4_4:5783804-5783823 None:intergenic 40.0%
TTTATGGTCATATGGAGGTG+GGG + chr4_4:5783841-5783860 None:intergenic 40.0%
GGGAATTTATGGTCATATGG+AGG + chr4_4:5783846-5783865 None:intergenic 40.0%
GGAGGGAATTTATGGTCATA+TGG + chr4_4:5783849-5783868 None:intergenic 40.0%
AATTTGTAGGCAAATGGAGG+TGG + chr4_4:5783906-5783925 None:intergenic 40.0%
GGGAATTTGTGTTCATATGG+AGG + chr4_4:5783954-5783973 None:intergenic 40.0%
GGAGGGAATTTGTGTTCATA+TGG + chr4_4:5783957-5783976 None:intergenic 40.0%
AACTTATGGTCATATGGTGG+TGG + chr4_4:5783996-5784015 None:intergenic 40.0%
TTGTAATCATAAGGAGGAGG+TGG + chr4_4:5784056-5784075 None:intergenic 40.0%
TTGTAGATATATGGAGGAGG+TGG + chr4_4:5784227-5784246 None:intergenic 40.0%
TTATACACATATGGAGGAGG+TGG + chr4_4:5784257-5784276 None:intergenic 40.0%
GACTTATACACATATGGAGG+AGG + chr4_4:5784260-5784279 None:intergenic 40.0%
GGTGACTTATACACATATGG+AGG + chr4_4:5784263-5784282 None:intergenic 40.0%
GGTGGTGACTTATACACATA+TGG + chr4_4:5784266-5784285 None:intergenic 40.0%
TTGTAGATATATGGAGGAGG+TGG + chr4_4:5784227-5784246 None:intergenic 40.0%
GACTTGTAGATATATGGAGG+AGG + chr4_4:5784332-5784351 None:intergenic 40.0%
ACTTGTAGACATATGGAGGT+GGG + chr4_4:5784382-5784401 None:intergenic 40.0%
GACTTGTATACATATGGTGG+GGG + chr4_4:5784431-5784450 None:intergenic 40.0%
CGACTTGTATACATATGGTG+GGG + chr4_4:5784432-5784451 None:intergenic 40.0%
GCGACTTGTATACATATGGT+GGG + chr4_4:5784433-5784452 None:intergenic 40.0%
GATTTGTAGACATATGGTGG+TGG + chr4_4:5784461-5784480 None:intergenic 40.0%
! GGTGATTTGTAGACATATGG+TGG + chr4_4:5784464-5784483 None:intergenic 40.0%
GATTGGTAAACATATGGAGG+AGG + chr4_4:5784491-5784510 None:intergenic 40.0%
GGTGATTGGTAAACATATGG+AGG + chr4_4:5784494-5784513 None:intergenic 40.0%
GGAGGTGATTGGTAAACATA+TGG + chr4_4:5784497-5784516 None:intergenic 40.0%
GATTTGTAGACATATGGTGG+AGG + chr4_4:5784461-5784480 None:intergenic 40.0%
! TAAACATATGGAGGGGGTAT+AGG + chr4_4:5784620-5784639 None:intergenic 40.0%
GACTCATAAACATATGGAGG+GGG + chr4_4:5784626-5784645 None:intergenic 40.0%
GGAGACTCATAAACATATGG+AGG + chr4_4:5784629-5784648 None:intergenic 40.0%
GGTGGAGACTCATAAACATA+TGG + chr4_4:5784632-5784651 None:intergenic 40.0%
AGGGATTATATGGTGTAGGT+GGG + chr4_4:5784721-5784740 None:intergenic 40.0%
TAGGGATTATATGGTGTAGG+TGG + chr4_4:5784722-5784741 None:intergenic 40.0%
TGGTAGGGATTATATGGTGT+AGG + chr4_4:5784725-5784744 None:intergenic 40.0%
GGAGGTGAACTATATTGGTA+GGG + chr4_4:5784740-5784759 None:intergenic 40.0%
TGGAGGTGAACTATATTGGT+AGG + chr4_4:5784741-5784760 None:intergenic 40.0%
GGTTGTGGATAGTTGTAGTA+TGG + chr4_4:5783675-5783694 None:intergenic 40.0%
!! TAGTAAGATGGTGGTGTTGT+TGG + chr4_4:5783696-5783715 None:intergenic 40.0%
AATTTGTAGGCATATGGAGG+TGG + chr4_4:5783753-5783772 None:intergenic 40.0%
GATTTGTGTTCATATGGAGG+TGG + chr4_4:5783798-5783817 None:intergenic 40.0%
GGAGATTTGTGTTCATATGG+AGG + chr4_4:5783801-5783820 None:intergenic 40.0%
GGAGGAGATTTGTGTTCATA+TGG + chr4_4:5783804-5783823 None:intergenic 40.0%
TTTATGGTCATATGGAGGTG+GGG + chr4_4:5783841-5783860 None:intergenic 40.0%
GGGAATTTATGGTCATATGG+AGG + chr4_4:5783846-5783865 None:intergenic 40.0%
GGAGGGAATTTATGGTCATA+TGG + chr4_4:5783849-5783868 None:intergenic 40.0%
AATTTGTAGGCAAATGGAGG+TGG + chr4_4:5783906-5783925 None:intergenic 40.0%
GGGAATTTGTGTTCATATGG+AGG + chr4_4:5783954-5783973 None:intergenic 40.0%
GGAGGGAATTTGTGTTCATA+TGG + chr4_4:5783957-5783976 None:intergenic 40.0%
AACTTATGGTCATATGGTGG+TGG + chr4_4:5783996-5784015 None:intergenic 40.0%
TTGTAATCATAAGGAGGAGG+TGG + chr4_4:5784056-5784075 None:intergenic 40.0%
TTGTAGATATATGGAGGAGG+TGG + chr4_4:5784227-5784246 None:intergenic 40.0%
TTATACACATATGGAGGAGG+TGG + chr4_4:5784257-5784276 None:intergenic 40.0%
GACTTATACACATATGGAGG+AGG + chr4_4:5784260-5784279 None:intergenic 40.0%
GGTGACTTATACACATATGG+AGG + chr4_4:5784263-5784282 None:intergenic 40.0%
GGTGGTGACTTATACACATA+TGG + chr4_4:5784266-5784285 None:intergenic 40.0%
TTGTAGATATATGGAGGAGG+TGG + chr4_4:5784227-5784246 None:intergenic 40.0%
GACTTGTAGATATATGGAGG+AGG + chr4_4:5784332-5784351 None:intergenic 40.0%
ACTTGTAGACATATGGAGGT+GGG + chr4_4:5784382-5784401 None:intergenic 40.0%
GACTTGTATACATATGGTGG+GGG + chr4_4:5784431-5784450 None:intergenic 40.0%
CGACTTGTATACATATGGTG+GGG + chr4_4:5784432-5784451 None:intergenic 40.0%
GCGACTTGTATACATATGGT+GGG + chr4_4:5784433-5784452 None:intergenic 40.0%
GATTTGTAGACATATGGTGG+TGG + chr4_4:5784461-5784480 None:intergenic 40.0%
! GGTGATTTGTAGACATATGG+TGG + chr4_4:5784464-5784483 None:intergenic 40.0%
GATTGGTAAACATATGGAGG+AGG + chr4_4:5784491-5784510 None:intergenic 40.0%
GGTGATTGGTAAACATATGG+AGG + chr4_4:5784494-5784513 None:intergenic 40.0%
GGAGGTGATTGGTAAACATA+TGG + chr4_4:5784497-5784516 None:intergenic 40.0%
GATTTGTAGACATATGGTGG+AGG + chr4_4:5784461-5784480 None:intergenic 40.0%
! TAAACATATGGAGGGGGTAT+AGG + chr4_4:5784620-5784639 None:intergenic 40.0%
GACTCATAAACATATGGAGG+GGG + chr4_4:5784626-5784645 None:intergenic 40.0%
GGAGACTCATAAACATATGG+AGG + chr4_4:5784629-5784648 None:intergenic 40.0%
GGTGGAGACTCATAAACATA+TGG + chr4_4:5784632-5784651 None:intergenic 40.0%
AGGGATTATATGGTGTAGGT+GGG + chr4_4:5784721-5784740 None:intergenic 40.0%
TAGGGATTATATGGTGTAGG+TGG + chr4_4:5784722-5784741 None:intergenic 40.0%
TGGTAGGGATTATATGGTGT+AGG + chr4_4:5784725-5784744 None:intergenic 40.0%
GGAGGTGAACTATATTGGTA+GGG + chr4_4:5784740-5784759 None:intergenic 40.0%
TGGAGGTGAACTATATTGGT+AGG + chr4_4:5784741-5784760 None:intergenic 40.0%
GCTATTGCATACATGAGTCG+AGG + chr4_4:5783585-5783604 None:intergenic 45.0%
GGTTGTTGACCTCCATAGTA+AGG + chr4_4:5783654-5783673 None:intergenic 45.0%
GGGAATTTGTAGGCATATGG+AGG + chr4_4:5783756-5783775 None:intergenic 45.0%
GGAGGGAATTTGTAGGCATA+TGG + chr4_4:5783759-5783778 None:intergenic 45.0%
GGGAATTTGTAGGCAAATGG+AGG + chr4_4:5783909-5783928 None:intergenic 45.0%
GGAGGGAATTTGTAGGCAAA+TGG + chr4_4:5783912-5783931 None:intergenic 45.0%
GGGAACTTATGGTCATATGG+TGG + chr4_4:5783999-5784018 None:intergenic 45.0%
GGAGGGAACTTATGGTCATA+TGG + chr4_4:5784002-5784021 None:intergenic 45.0%
TTGTACACATATGGAGGAGG+TGG + chr4_4:5784155-5784174 None:intergenic 45.0%
GACTTGTACACATATGGAGG+AGG + chr4_4:5784158-5784177 None:intergenic 45.0%
! GGTGACTTGTACACATATGG+AGG + chr4_4:5784161-5784180 None:intergenic 45.0%
! GGTGGTGACTTGTACACATA+TGG + chr4_4:5784164-5784183 None:intergenic 45.0%
TAAACATAAGGTGGAGGAGG+TGG + chr4_4:5784182-5784201 None:intergenic 45.0%
GATGGGTAAACATAAGGTGG+AGG + chr4_4:5784188-5784207 None:intergenic 45.0%
GGAGATGGGTAAACATAAGG+TGG + chr4_4:5784191-5784210 None:intergenic 45.0%
GGAGGAGATGGGTAAACATA+AGG + chr4_4:5784194-5784213 None:intergenic 45.0%
ATATATGGAGGAGGTGGTGA+TGG + chr4_4:5784221-5784240 None:intergenic 45.0%
TAAACATAAGGTGGAGGAGG+TGG + chr4_4:5784182-5784201 None:intergenic 45.0%
ATATATGGAGGAGGTGGTGA+TGG + chr4_4:5784221-5784240 None:intergenic 45.0%
GGCGACTTGTAGATATATGG+AGG + chr4_4:5784335-5784354 None:intergenic 45.0%
GGTGGCGACTTGTAGATATA+TGG + chr4_4:5784338-5784357 None:intergenic 45.0%
CTTGTAGACATATGGAGGTG+GGG + chr4_4:5784381-5784400 None:intergenic 45.0%
GACTTGTAGACATATGGAGG+TGG + chr4_4:5784383-5784402 None:intergenic 45.0%
GGAGACTTGTAGACATATGG+AGG + chr4_4:5784386-5784405 None:intergenic 45.0%
GGAGGAGACTTGTAGACATA+TGG + chr4_4:5784389-5784408 None:intergenic 45.0%
! TTGTATACATATGGTGGGGG+TGG + chr4_4:5784428-5784447 None:intergenic 45.0%
GGCGACTTGTATACATATGG+TGG + chr4_4:5784434-5784453 None:intergenic 45.0%
GGTGGCGACTTGTATACATA+TGG + chr4_4:5784437-5784456 None:intergenic 45.0%
!! TTGTAGACATATGGTGGTGG+AGG + chr4_4:5784458-5784477 None:intergenic 45.0%
! GGCGGTGATTTGTAGACATA+TGG + chr4_4:5784467-5784486 None:intergenic 45.0%
TAAACATATGGAGGAGGTGG+CGG + chr4_4:5784485-5784504 None:intergenic 45.0%
TGGTAAACATATGGAGGAGG+TGG + chr4_4:5784488-5784507 None:intergenic 45.0%
! TTGTAGACATATGGTGGAGG+AGG + chr4_4:5784518-5784537 None:intergenic 45.0%
GGGGATTTGTAGACATATGG+TGG + chr4_4:5784524-5784543 None:intergenic 45.0%
! TCATAAACGTAAGGTGGTGG+TGG + chr4_4:5784548-5784567 None:intergenic 45.0%
GACTCATAAACGTAAGGTGG+TGG + chr4_4:5784551-5784570 None:intergenic 45.0%
GGTGACTCATAAACGTAAGG+TGG + chr4_4:5784554-5784573 None:intergenic 45.0%
GGAGGTGACTCATAAACGTA+AGG + chr4_4:5784557-5784576 None:intergenic 45.0%
TTGTAGTAGTATGGAGGAGG+TGG + chr4_4:5784596-5784615 None:intergenic 45.0%
GGTTTGTAGTAGTATGGAGG+AGG + chr4_4:5784599-5784618 None:intergenic 45.0%
TTATAAACATAGGGAGCGGG+TGG + chr4_4:5784674-5784693 None:intergenic 45.0%
GGGGATTTGTAAACGTAAGG+AGG + chr4_4:5784701-5784720 None:intergenic 45.0%
GGTGGGGATTTGTAAACGTA+AGG + chr4_4:5784704-5784723 None:intergenic 45.0%
GGGATTATATGGTGTAGGTG+GGG + chr4_4:5784720-5784739 None:intergenic 45.0%
GCTATTGCATACATGAGTCG+AGG + chr4_4:5783585-5783604 None:intergenic 45.0%
GGTTGTTGACCTCCATAGTA+AGG + chr4_4:5783654-5783673 None:intergenic 45.0%
GGGAATTTGTAGGCATATGG+AGG + chr4_4:5783756-5783775 None:intergenic 45.0%
GGAGGGAATTTGTAGGCATA+TGG + chr4_4:5783759-5783778 None:intergenic 45.0%
GGGAATTTGTAGGCAAATGG+AGG + chr4_4:5783909-5783928 None:intergenic 45.0%
GGAGGGAATTTGTAGGCAAA+TGG + chr4_4:5783912-5783931 None:intergenic 45.0%
GGGAACTTATGGTCATATGG+TGG + chr4_4:5783999-5784018 None:intergenic 45.0%
GGAGGGAACTTATGGTCATA+TGG + chr4_4:5784002-5784021 None:intergenic 45.0%
TTGTACACATATGGAGGAGG+TGG + chr4_4:5784155-5784174 None:intergenic 45.0%
GACTTGTACACATATGGAGG+AGG + chr4_4:5784158-5784177 None:intergenic 45.0%
! GGTGACTTGTACACATATGG+AGG + chr4_4:5784161-5784180 None:intergenic 45.0%
! GGTGGTGACTTGTACACATA+TGG + chr4_4:5784164-5784183 None:intergenic 45.0%
TAAACATAAGGTGGAGGAGG+TGG + chr4_4:5784182-5784201 None:intergenic 45.0%
GATGGGTAAACATAAGGTGG+AGG + chr4_4:5784188-5784207 None:intergenic 45.0%
GGAGATGGGTAAACATAAGG+TGG + chr4_4:5784191-5784210 None:intergenic 45.0%
GGAGGAGATGGGTAAACATA+AGG + chr4_4:5784194-5784213 None:intergenic 45.0%
ATATATGGAGGAGGTGGTGA+TGG + chr4_4:5784221-5784240 None:intergenic 45.0%
TAAACATAAGGTGGAGGAGG+TGG + chr4_4:5784182-5784201 None:intergenic 45.0%
ATATATGGAGGAGGTGGTGA+TGG + chr4_4:5784221-5784240 None:intergenic 45.0%
GGCGACTTGTAGATATATGG+AGG + chr4_4:5784335-5784354 None:intergenic 45.0%
GGTGGCGACTTGTAGATATA+TGG + chr4_4:5784338-5784357 None:intergenic 45.0%
CTTGTAGACATATGGAGGTG+GGG + chr4_4:5784381-5784400 None:intergenic 45.0%
GACTTGTAGACATATGGAGG+TGG + chr4_4:5784383-5784402 None:intergenic 45.0%
GGAGACTTGTAGACATATGG+AGG + chr4_4:5784386-5784405 None:intergenic 45.0%
GGAGGAGACTTGTAGACATA+TGG + chr4_4:5784389-5784408 None:intergenic 45.0%
! TTGTATACATATGGTGGGGG+TGG + chr4_4:5784428-5784447 None:intergenic 45.0%
GGCGACTTGTATACATATGG+TGG + chr4_4:5784434-5784453 None:intergenic 45.0%
GGTGGCGACTTGTATACATA+TGG + chr4_4:5784437-5784456 None:intergenic 45.0%
!! TTGTAGACATATGGTGGTGG+AGG + chr4_4:5784458-5784477 None:intergenic 45.0%
! GGCGGTGATTTGTAGACATA+TGG + chr4_4:5784467-5784486 None:intergenic 45.0%
TAAACATATGGAGGAGGTGG+CGG + chr4_4:5784485-5784504 None:intergenic 45.0%
TGGTAAACATATGGAGGAGG+TGG + chr4_4:5784488-5784507 None:intergenic 45.0%
! TTGTAGACATATGGTGGAGG+AGG + chr4_4:5784518-5784537 None:intergenic 45.0%
GGGGATTTGTAGACATATGG+TGG + chr4_4:5784524-5784543 None:intergenic 45.0%
! TCATAAACGTAAGGTGGTGG+TGG + chr4_4:5784548-5784567 None:intergenic 45.0%
GACTCATAAACGTAAGGTGG+TGG + chr4_4:5784551-5784570 None:intergenic 45.0%
GGTGACTCATAAACGTAAGG+TGG + chr4_4:5784554-5784573 None:intergenic 45.0%
GGAGGTGACTCATAAACGTA+AGG + chr4_4:5784557-5784576 None:intergenic 45.0%
TTGTAGTAGTATGGAGGAGG+TGG + chr4_4:5784596-5784615 None:intergenic 45.0%
GGTTTGTAGTAGTATGGAGG+AGG + chr4_4:5784599-5784618 None:intergenic 45.0%
TTATAAACATAGGGAGCGGG+TGG + chr4_4:5784674-5784693 None:intergenic 45.0%
GGGGATTTGTAAACGTAAGG+AGG + chr4_4:5784701-5784720 None:intergenic 45.0%
GGTGGGGATTTGTAAACGTA+AGG + chr4_4:5784704-5784723 None:intergenic 45.0%
GGGATTATATGGTGTAGGTG+GGG + chr4_4:5784720-5784739 None:intergenic 45.0%
TGGGAACATCAATTGAGCCG+AGG - chr4_4:5783553-5783572 Msa0665910:CDS 50.0%
!! GATGGTGGTGTTGTTGGTTG+TGG + chr4_4:5783690-5783709 None:intergenic 50.0%
TTGTAGGCAAATGGAGGTGG+TGG + chr4_4:5783903-5783922 None:intergenic 50.0%
! ATAAGGAGGAGGTGGTGATG+GGG + chr4_4:5784048-5784067 None:intergenic 50.0%
CATAAGGAGGAGGTGGTGAT+GGG + chr4_4:5784049-5784068 None:intergenic 50.0%
TCATAAGGAGGAGGTGGTGA+TGG + chr4_4:5784050-5784069 None:intergenic 50.0%
! ACATAAGGAGGTGGTGGTGA+TGG + chr4_4:5784119-5784138 None:intergenic 50.0%
TACACATATGGAGGAGGTGG+TGG + chr4_4:5784152-5784171 None:intergenic 50.0%
GGGTAAACATAAGGTGGAGG+AGG + chr4_4:5784185-5784204 None:intergenic 50.0%
TACACATATGGAGGAGGTGG+TGG + chr4_4:5784152-5784171 None:intergenic 50.0%
GGGTAAACATAAGGTGGAGG+AGG + chr4_4:5784185-5784204 None:intergenic 50.0%
GACGGGTAAACATAAGGTGG+AGG + chr4_4:5784290-5784309 None:intergenic 50.0%
GGAGACGGGTAAACATAAGG+TGG + chr4_4:5784293-5784312 None:intergenic 50.0%
GGAGGAGACGGGTAAACATA+AGG + chr4_4:5784296-5784315 None:intergenic 50.0%
TGGGGTGTACACATATGGTG+GGG + chr4_4:5784363-5784382 None:intergenic 50.0%
GTGGGGTGTACACATATGGT+GGG + chr4_4:5784364-5784383 None:intergenic 50.0%
!! TAGACATATGGTGGTGGAGG+TGG + chr4_4:5784455-5784474 None:intergenic 50.0%
! TAGACATATGGTGGAGGAGG+AGG + chr4_4:5784515-5784534 None:intergenic 50.0%
GGCGGGGATTTGTAGACATA+TGG + chr4_4:5784527-5784546 None:intergenic 50.0%
!! TAAACGTAAGGTGGTGGTGG+CGG + chr4_4:5784545-5784564 None:intergenic 50.0%
TAGTATGGAGGAGGTGGTGA+AGG + chr4_4:5784590-5784609 None:intergenic 50.0%
GGGGTGGAGGTGAACTATAT+TGG + chr4_4:5784745-5784764 None:intergenic 50.0%
TGGGAACATCAATTGAGCCG+AGG - chr4_4:5783553-5783572 Msa0665910:CDS 50.0%
!! GATGGTGGTGTTGTTGGTTG+TGG + chr4_4:5783690-5783709 None:intergenic 50.0%
TTGTAGGCAAATGGAGGTGG+TGG + chr4_4:5783903-5783922 None:intergenic 50.0%
! ATAAGGAGGAGGTGGTGATG+GGG + chr4_4:5784048-5784067 None:intergenic 50.0%
CATAAGGAGGAGGTGGTGAT+GGG + chr4_4:5784049-5784068 None:intergenic 50.0%
TCATAAGGAGGAGGTGGTGA+TGG + chr4_4:5784050-5784069 None:intergenic 50.0%
! ACATAAGGAGGTGGTGGTGA+TGG + chr4_4:5784119-5784138 None:intergenic 50.0%
TACACATATGGAGGAGGTGG+TGG + chr4_4:5784152-5784171 None:intergenic 50.0%
GGGTAAACATAAGGTGGAGG+AGG + chr4_4:5784185-5784204 None:intergenic 50.0%
TACACATATGGAGGAGGTGG+TGG + chr4_4:5784152-5784171 None:intergenic 50.0%
GGGTAAACATAAGGTGGAGG+AGG + chr4_4:5784185-5784204 None:intergenic 50.0%
GACGGGTAAACATAAGGTGG+AGG + chr4_4:5784290-5784309 None:intergenic 50.0%
GGAGACGGGTAAACATAAGG+TGG + chr4_4:5784293-5784312 None:intergenic 50.0%
GGAGGAGACGGGTAAACATA+AGG + chr4_4:5784296-5784315 None:intergenic 50.0%
TGGGGTGTACACATATGGTG+GGG + chr4_4:5784363-5784382 None:intergenic 50.0%
GTGGGGTGTACACATATGGT+GGG + chr4_4:5784364-5784383 None:intergenic 50.0%
!! TAGACATATGGTGGTGGAGG+TGG + chr4_4:5784455-5784474 None:intergenic 50.0%
! TAGACATATGGTGGAGGAGG+AGG + chr4_4:5784515-5784534 None:intergenic 50.0%
GGCGGGGATTTGTAGACATA+TGG + chr4_4:5784527-5784546 None:intergenic 50.0%
!! TAAACGTAAGGTGGTGGTGG+CGG + chr4_4:5784545-5784564 None:intergenic 50.0%
TAGTATGGAGGAGGTGGTGA+AGG + chr4_4:5784590-5784609 None:intergenic 50.0%
GGGGTGGAGGTGAACTATAT+TGG + chr4_4:5784745-5784764 None:intergenic 50.0%
ATGAGTCGAGGCAAGTGCCT+CGG + chr4_4:5783573-5783592 None:intergenic 55.0%
!! AATGGAGGTGGTGGTGATGG+TGG + chr4_4:5783894-5783913 None:intergenic 55.0%
! GCAAATGGAGGTGGTGGTGA+TGG + chr4_4:5783897-5783916 None:intergenic 55.0%
!! TAAGGAGGAGGTGGTGATGG+GGG + chr4_4:5784047-5784066 None:intergenic 55.0%
!! GTGATGGTGGAGGAGGAGAT+GGG + chr4_4:5784205-5784224 None:intergenic 55.0%
!! TATGGAGGAGGTGGTGATGG+TGG + chr4_4:5784218-5784237 None:intergenic 55.0%
!! TATGGAGGAGGTGGTGATGG+TGG + chr4_4:5784218-5784237 None:intergenic 55.0%
! TACACATATGGTGGGGGAGG+TGG + chr4_4:5784356-5784375 None:intergenic 55.0%
! GTGTACACATATGGTGGGGG+AGG + chr4_4:5784359-5784378 None:intergenic 55.0%
GGGGTGTACACATATGGTGG+GGG + chr4_4:5784362-5784381 None:intergenic 55.0%
GGTGGGGTGTACACATATGG+TGG + chr4_4:5784365-5784384 None:intergenic 55.0%
GGAGGTGGGGTGTACACATA+TGG + chr4_4:5784368-5784387 None:intergenic 55.0%
! ACATATGGTGGGGGTGGTGA+GGG + chr4_4:5784422-5784441 None:intergenic 55.0%
! TACATATGGTGGGGGTGGTG+AGG + chr4_4:5784423-5784442 None:intergenic 55.0%
! ATGGTGGAGGAGGAGGTGAT+TGG + chr4_4:5784508-5784527 None:intergenic 55.0%
!! AAACGTAAGGTGGTGGTGGC+GGG + chr4_4:5784544-5784563 None:intergenic 55.0%
AAACATAGGGAGCGGGTGGT+GGG + chr4_4:5784670-5784689 None:intergenic 55.0%
TAAACATAGGGAGCGGGTGG+TGG + chr4_4:5784671-5784690 None:intergenic 55.0%
ATGAGTCGAGGCAAGTGCCT+CGG + chr4_4:5783573-5783592 None:intergenic 55.0%
!! AATGGAGGTGGTGGTGATGG+TGG + chr4_4:5783894-5783913 None:intergenic 55.0%
! GCAAATGGAGGTGGTGGTGA+TGG + chr4_4:5783897-5783916 None:intergenic 55.0%
!! TAAGGAGGAGGTGGTGATGG+GGG + chr4_4:5784047-5784066 None:intergenic 55.0%
!! GTGATGGTGGAGGAGGAGAT+GGG + chr4_4:5784205-5784224 None:intergenic 55.0%
!! TATGGAGGAGGTGGTGATGG+TGG + chr4_4:5784218-5784237 None:intergenic 55.0%
!! TATGGAGGAGGTGGTGATGG+TGG + chr4_4:5784218-5784237 None:intergenic 55.0%
! TACACATATGGTGGGGGAGG+TGG + chr4_4:5784356-5784375 None:intergenic 55.0%
! GTGTACACATATGGTGGGGG+AGG + chr4_4:5784359-5784378 None:intergenic 55.0%
GGGGTGTACACATATGGTGG+GGG + chr4_4:5784362-5784381 None:intergenic 55.0%
GGTGGGGTGTACACATATGG+TGG + chr4_4:5784365-5784384 None:intergenic 55.0%
GGAGGTGGGGTGTACACATA+TGG + chr4_4:5784368-5784387 None:intergenic 55.0%
! ACATATGGTGGGGGTGGTGA+GGG + chr4_4:5784422-5784441 None:intergenic 55.0%
! TACATATGGTGGGGGTGGTG+AGG + chr4_4:5784423-5784442 None:intergenic 55.0%
! ATGGTGGAGGAGGAGGTGAT+TGG + chr4_4:5784508-5784527 None:intergenic 55.0%
!! AAACGTAAGGTGGTGGTGGC+GGG + chr4_4:5784544-5784563 None:intergenic 55.0%
AAACATAGGGAGCGGGTGGT+GGG + chr4_4:5784670-5784689 None:intergenic 55.0%
TAAACATAGGGAGCGGGTGG+TGG + chr4_4:5784671-5784690 None:intergenic 55.0%
!! GGTGATGGAGATGGTGGTGG+TGG + chr4_4:5784104-5784123 None:intergenic 60.0%
!! GGTGGTGATGGAGATGGTGG+TGG + chr4_4:5784107-5784126 None:intergenic 60.0%
!! GGTGGTGGTGATGGAGATGG+TGG + chr4_4:5784110-5784129 None:intergenic 60.0%
!! GGAGGTGGTGGTGATGGAGA+TGG + chr4_4:5784113-5784132 None:intergenic 60.0%
!! GGTGATGGTGGAGGAGGAGA+TGG + chr4_4:5784206-5784225 None:intergenic 60.0%
!! GTGATGGTGGAGGAGGAGAC+GGG + chr4_4:5784307-5784326 None:intergenic 60.0%
!! GGTGATGGTGGAGGAGGAGA+CGG + chr4_4:5784206-5784225 None:intergenic 60.0%
!! AACGTAAGGTGGTGGTGGCG+GGG + chr4_4:5784543-5784562 None:intergenic 60.0%
GGAGGAGGTGGTGAAGGTGA+GGG + chr4_4:5784584-5784603 None:intergenic 60.0%
TGGAGGAGGTGGTGAAGGTG+AGG + chr4_4:5784585-5784604 None:intergenic 60.0%
AACATAGGGAGCGGGTGGTG+GGG + chr4_4:5784669-5784688 None:intergenic 60.0%
!! GGTGATGGAGATGGTGGTGG+TGG + chr4_4:5784104-5784123 None:intergenic 60.0%
!! GGTGGTGATGGAGATGGTGG+TGG + chr4_4:5784107-5784126 None:intergenic 60.0%
!! GGTGGTGGTGATGGAGATGG+TGG + chr4_4:5784110-5784129 None:intergenic 60.0%
!! GGAGGTGGTGGTGATGGAGA+TGG + chr4_4:5784113-5784132 None:intergenic 60.0%
!! GGTGATGGTGGAGGAGGAGA+TGG + chr4_4:5784206-5784225 None:intergenic 60.0%
!! GTGATGGTGGAGGAGGAGAC+GGG + chr4_4:5784307-5784326 None:intergenic 60.0%
!! GGTGATGGTGGAGGAGGAGA+CGG + chr4_4:5784206-5784225 None:intergenic 60.0%
!! AACGTAAGGTGGTGGTGGCG+GGG + chr4_4:5784543-5784562 None:intergenic 60.0%
GGAGGAGGTGGTGAAGGTGA+GGG + chr4_4:5784584-5784603 None:intergenic 60.0%
TGGAGGAGGTGGTGAAGGTG+AGG + chr4_4:5784585-5784604 None:intergenic 60.0%
AACATAGGGAGCGGGTGGTG+GGG + chr4_4:5784669-5784688 None:intergenic 60.0%
!! GGAGGTGGTGGTGATGGTGG+TGG + chr4_4:5783891-5783910 None:intergenic 65.0%
!! GGAGGTGGTGATGGTGGAGG+AGG + chr4_4:5784212-5784231 None:intergenic 65.0%
!! GGAGGAGGTGGTGATGGTGG+AGG + chr4_4:5784215-5784234 None:intergenic 65.0%
!! GGAGGTGGTGATGGTGGAGG+AGG + chr4_4:5784212-5784231 None:intergenic 65.0%
!! GGAGGAGGTGGTGATGGTGG+AGG + chr4_4:5784215-5784234 None:intergenic 65.0%
!! GGTGAGGGAGATGGTGGAGG+AGG + chr4_4:5784407-5784426 None:intergenic 65.0%
! GGTGGTGAGGGAGATGGTGG+AGG + chr4_4:5784410-5784429 None:intergenic 65.0%
GGTGAAGGTGAGGGAGGAGG+AGG + chr4_4:5784575-5784594 None:intergenic 65.0%
GGTGGTGAAGGTGAGGGAGG+AGG + chr4_4:5784578-5784597 None:intergenic 65.0%
GGAGGTGGTGAAGGTGAGGG+AGG + chr4_4:5784581-5784600 None:intergenic 65.0%
!! GGAGGTGGTGGTGATGGTGG+TGG + chr4_4:5783891-5783910 None:intergenic 65.0%
!! GGAGGTGGTGATGGTGGAGG+AGG + chr4_4:5784212-5784231 None:intergenic 65.0%
!! GGAGGAGGTGGTGATGGTGG+AGG + chr4_4:5784215-5784234 None:intergenic 65.0%
!! GGAGGTGGTGATGGTGGAGG+AGG + chr4_4:5784212-5784231 None:intergenic 65.0%
!! GGAGGAGGTGGTGATGGTGG+AGG + chr4_4:5784215-5784234 None:intergenic 65.0%
!! GGTGAGGGAGATGGTGGAGG+AGG + chr4_4:5784407-5784426 None:intergenic 65.0%
! GGTGGTGAGGGAGATGGTGG+AGG + chr4_4:5784410-5784429 None:intergenic 65.0%
GGTGAAGGTGAGGGAGGAGG+AGG + chr4_4:5784575-5784594 None:intergenic 65.0%
GGTGGTGAAGGTGAGGGAGG+AGG + chr4_4:5784578-5784597 None:intergenic 65.0%
GGAGGTGGTGAAGGTGAGGG+AGG + chr4_4:5784581-5784600 None:intergenic 65.0%
!! GGAGGTGGTGATGGGGGTGG+AGG + chr4_4:5784041-5784060 None:intergenic 70.0%
!! GGAGGAGGTGGTGATGGGGG+TGG + chr4_4:5784044-5784063 None:intergenic 70.0%
GGGGGTGGTGAGGGAGATGG+TGG + chr4_4:5784413-5784432 None:intergenic 70.0%
GGTGGGGGTGGTGAGGGAGA+TGG + chr4_4:5784416-5784435 None:intergenic 70.0%
!! GGAGGTGGTGATGGGGGTGG+AGG + chr4_4:5784041-5784060 None:intergenic 70.0%
!! GGAGGAGGTGGTGATGGGGG+TGG + chr4_4:5784044-5784063 None:intergenic 70.0%
GGGGGTGGTGAGGGAGATGG+TGG + chr4_4:5784413-5784432 None:intergenic 70.0%
GGTGGGGGTGGTGAGGGAGA+TGG + chr4_4:5784416-5784435 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 5783552 5784775 5783552 ID=Msa0665910;Name=Msa0665910
chr4_4 mRNA 5783552 5784775 5783552 ID=Msa0665910-mRNA-1;Parent=Msa0665910;Name=Msa0665910-mRNA-1;_AED=0.15;_eAED=0.19;_QI=0|-1|0|1|-1|1|1|0|407
chr4_4 exon 5783552 5784775 5783552 ID=Msa0665910-mRNA-1:exon:1867;Parent=Msa0665910-mRNA-1
chr4_4 CDS 5783552 5784775 5783552 ID=Msa0665910-mRNA-1:cds;Parent=Msa0665910-mRNA-1
Gene Sequence

>Msa0665910

ATGGGAACATCAATTGAGCCGAGGCACTTGCCTCGACTCATGTATGCAATAGCATTTTGCATAATTGCTATTAGTACTTTTGCTATTGCTGATGATAAACCTTACTATGGAGGTCAACAACCATACTACAACTATCCACAACCAACAACACCACCATCTTACTATTACAAACCACCGCCATATAATAACTATCAATCTCCACCTCCATATGCCTACAAATTCCCTCCATATAACTATCAATCTCCACCTCCATATGAACACAAATCTCCTCCATATAACTATAAATCCCCACCTCCATATGACCATAAATTCCCTCCATATAATTACTATAAATCTCCACCACCATCACCACCACCTCCATTTGCCTACAAATTCCCTCCATACAATTATCAATCTCCACCTCCATATGAACACAAATTCCCTCCATATAACTATAAATCTCCACCACCATATGACCATAAGTTCCCTCCATATAATTACTATAAACCTCCACCCCCATCACCACCTCCTCCTTATGATTACAAATTACCACCATATTACTACAAATCTCCACCACCACCATCTCCATCACCACCACCTCCTTATGTTTATAAATCACCACCACCTCCTCCATATGTGTACAAGTCACCACCTCCTCCACCTTATGTTTACCCATCTCCTCCTCCACCATCACCACCTCCTCCATATATCTACAAATCACCACCACCTCCTCCATATGTGTATAAGTCACCACCTCCTCCACCTTATGTTTACCCGTCTCCTCCTCCACCATCACCACCTCCTCCATATATCTACAAGTCGCCACCTCCCCCACCATATGTGTACACCCCACCTCCATATGTCTACAAGTCTCCTCCTCCACCATCTCCCTCACCACCCCCACCATATGTATACAAGTCGCCACCTCCACCACCATATGTCTACAAATCACCGCCACCTCCTCCATATGTTTACCAATCACCTCCTCCTCCACCATATGTCTACAAATCCCCGCCACCACCACCTTACGTTTATGAGTCACCTCCTCCTCCCTCACCTTCACCACCTCCTCCATACTACTACAAACCTATACCCCCTCCATATGTTTATGAGTCTCCACCATATATCTATAAATCCCCACCACCCGCTCCCTATGTTTATAAATCTCCTCCTTACGTTTACAAATCCCCACCTACACCATATAATCCCTACCAATATAGTTCACCTCCACCCCCTGTGTATTAA
Protein sequence

>Msa0665910

MGTSIEPRHLPRLMYAIAFCIIAISTFAIADDKPYYGGQQPYYNYPQPTTPPSYYYKPPPYNNYQSPPPYAYKFPPYNYQSPPPYEHKSPPYNYKSPPPYDHKFPPYNYYKSPPPSPPPPFAYKFPPYNYQSPPPYEHKFPPYNYKSPPPYDHKFPPYNYYKPPPPSPPPPYDYKLPPYYYKSPPPPSPSPPPPYVYKSPPPPPYVYKSPPPPPYVYPSPPPPSPPPPYIYKSPPPPPYVYKSPPPPPYVYPSPPPPSPPPPYIYKSPPPPPYVYTPPPYVYKSPPPPSPSPPPPYVYKSPPPPPYVYKSPPPPPYVYQSPPPPPYVYKSPPPPPYVYESPPPPSPSPPPPYYYKPIPPPYVYESPPYIYKSPPPAPYVYKSPPYVYKSPPTPYNPYQYSSPPPPVY*