AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1254170


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254170 MtrunA17_Chr8g0370711 86.224 392 16 1 1 392 1 354 0.0 692
Msa1254170 MtrunA17_Chr8g0370721 81.378 392 35 1 1 392 1 354 0.0 657
Msa1254170 MtrunA17_Chr3g0145171 68.367 392 86 1 1 392 1 354 0.0 552
Msa1254170 MtrunA17_Chr3g0145181 63.077 390 99 6 7 392 5 353 7.09e-169 476
Msa1254170 MtrunA17_Chr3g0145201 62.857 350 86 5 47 392 679 988 2.83e-145 437
Msa1254170 MtrunA17_Chr4g0064781 44.474 380 165 4 13 392 15 348 1.04e-110 328
Msa1254170 MtrunA17_Chr5g0423251 34.817 382 201 6 14 392 12 348 8.89e-69 221
Msa1254170 MtrunA17_Chr3g0087031 35.876 354 185 5 14 367 23 334 3.42e-67 217
Msa1254170 MtrunA17_Chr5g0421041 34.121 381 203 5 14 392 12 346 5.20e-67 216
Msa1254170 MtrunA17_Chr5g0423191 36.337 344 176 4 51 392 46 348 7.58e-66 213
Msa1254170 MtrunA17_Chr2g0314401 33.161 386 204 6 14 392 16 354 1.32e-65 213
Msa1254170 MtrunA17_Chr2g0296371 34.635 384 201 8 15 392 17 356 1.40e-65 213
Msa1254170 MtrunA17_Chr7g0239111 33.071 381 210 6 14 392 19 356 1.34e-64 210
Msa1254170 MtrunA17_Chr8g0375671 32.995 394 216 6 3 392 8 357 1.21e-63 207
Msa1254170 MtrunA17_Chr2g0314391 33.854 384 204 6 14 392 35 373 1.65e-63 207
Msa1254170 MtrunA17_Chr5g0420981 33.430 344 187 4 51 392 52 355 1.94e-62 204
Msa1254170 MtrunA17_Chr7g0239121 31.152 382 217 7 14 392 15 353 2.51e-62 204
Msa1254170 MtrunA17_Chr7g0239101 32.653 343 188 5 52 392 55 356 7.53e-62 203
Msa1254170 MtrunA17_Chr7g0242551 33.956 321 170 3 50 366 52 334 2.63e-61 201
Msa1254170 MtrunA17_Chr8g0375681 35.806 310 158 3 85 392 15 285 6.34e-61 198
Msa1254170 MtrunA17_Chr5g0421011 33.430 344 186 4 51 392 46 348 7.65e-61 200
Msa1254170 MtrunA17_Chr5g0421101 32.199 382 211 6 14 392 12 348 9.63e-61 200
Msa1254170 MtrunA17_Chr5g0423201 33.913 345 184 5 51 392 46 349 1.02e-60 200
Msa1254170 MtrunA17_Chr8g0375601 31.937 382 216 5 15 392 11 352 1.15e-60 200
Msa1254170 MtrunA17_Chr7g0239821 31.977 344 191 4 51 392 63 365 1.68e-60 199
Msa1254170 MtrunA17_Chr2g0314381 31.510 384 214 6 14 392 41 380 9.62e-60 198
Msa1254170 MtrunA17_Chr8g0375571 32.292 384 212 6 14 392 10 350 1.16e-59 197
Msa1254170 MtrunA17_Chr7g0232161 40.789 228 132 2 50 277 58 282 1.42e-59 196
Msa1254170 MtrunA17_Chr4g0006371 32.622 328 179 3 46 369 56 345 5.10e-59 196
Msa1254170 MtrunA17_Chr5g0420941 32.727 385 209 6 12 392 8 346 6.83e-59 195
Msa1254170 MtrunA17_Chr8g0365241 31.977 344 192 4 51 392 56 359 9.79e-59 195
Msa1254170 MtrunA17_Chr5g0423221 32.948 346 184 4 52 392 71 373 2.35e-58 194
Msa1254170 MtrunA17_Chr8g0375701 34.006 347 177 6 52 392 55 355 1.06e-57 192
Msa1254170 MtrunA17_Chr3g0113641 31.831 355 199 4 15 366 15 329 1.85e-57 191
Msa1254170 MtrunA17_Chr5g0420951 32.849 344 189 4 51 392 52 355 4.63e-57 190
Msa1254170 MtrunA17_Chr5g0420901 30.928 388 218 6 9 392 6 347 2.03e-56 189
Msa1254170 MtrunA17_Chr1g0162191 32.288 319 177 2 51 369 46 325 4.06e-56 188
Msa1254170 MtrunA17_Chr7g0239071 33.871 310 164 3 85 392 31 301 1.61e-55 185
Msa1254170 MtrunA17_Chr5g0421091 31.688 385 214 5 12 392 8 347 2.14e-55 186
Msa1254170 MtrunA17_Chr5g0437181 30.618 356 202 5 15 366 14 328 1.93e-54 183
Msa1254170 MtrunA17_Chr4g0064771 35.593 295 100 2 90 384 1 205 2.60e-53 176
Msa1254170 MtrunA17_Chr5g0424201 32.099 324 174 6 50 370 42 322 1.16e-52 178
Msa1254170 MtrunA17_Chr5g0420721 35.664 286 143 3 109 392 4 250 9.85e-52 173
Msa1254170 MtrunA17_Chr5g0398291 29.459 370 205 8 12 368 5 331 2.27e-51 175
Msa1254170 MtrunA17_Chr3g0114861 31.737 334 170 8 52 379 40 321 9.08e-51 173
Msa1254170 MtrunA17_Chr3g0128001 33.333 333 172 6 51 382 37 320 3.26e-50 172
Msa1254170 MtrunA17_Chr2g0314371 35.052 291 154 5 14 277 16 298 9.62e-50 171
Msa1254170 MtrunA17_Chr3g0109041 32.861 353 179 10 52 390 42 350 7.45e-48 166
Msa1254170 MtrunA17_Chr5g0423211 30.058 346 195 6 52 392 47 350 4.58e-47 164
Msa1254170 MtrunA17_Chr1g0179801 30.874 366 196 9 13 366 25 345 5.22e-46 162
Msa1254170 MtrunA17_Chr5g0424211 30.599 317 172 6 52 363 42 315 1.50e-45 159
Msa1254170 MtrunA17_Chr2g0332191 32.822 326 162 9 52 369 52 328 4.90e-44 156
Msa1254170 MtrunA17_Chr8g0345831 28.955 335 184 8 52 382 42 326 1.50e-41 149
Msa1254170 MtrunA17_Chr7g0265221 30.448 335 176 8 46 366 61 352 2.18e-41 150
Msa1254170 MtrunA17_Chr3g0102041 27.964 329 192 8 51 376 38 324 9.31e-41 147
Msa1254170 MtrunA17_Chr5g0412671 30.398 352 178 10 52 387 38 338 9.94e-41 147
Msa1254170 MtrunA17_Chr3g0114871 34.322 236 141 7 48 277 38 265 2.06e-40 144
Msa1254170 MtrunA17_Chr6g0455481 28.612 353 195 9 40 385 30 332 1.12e-39 144
Msa1254170 MtrunA17_Chr7g0239091 28.779 344 192 6 51 392 159 451 1.40e-39 146
Msa1254170 MtrunA17_Chr8g0371931 28.060 335 192 8 51 382 38 326 2.05e-39 144
Msa1254170 MtrunA17_Chr2g0289341 28.280 343 191 9 51 386 3 297 3.28e-39 142
Msa1254170 MtrunA17_Chr5g0412651 29.132 357 176 10 52 387 38 338 5.75e-39 142
Msa1254170 MtrunA17_Chr5g0405411 26.158 367 219 8 19 382 9 326 2.17e-38 141
Msa1254170 MtrunA17_Chr3g0121141 27.907 344 196 9 53 391 5 301 6.97e-38 139
Msa1254170 MtrunA17_Chr1g0162361 32.229 332 164 10 52 368 27 312 1.02e-37 139
Msa1254170 MtrunA17_Chr7g0250511 28.616 318 183 6 52 367 49 324 1.93e-37 138
Msa1254170 MtrunA17_Chr4g0045471 30.499 341 172 12 52 370 26 323 2.35e-37 138
Msa1254170 MtrunA17_Chr4g0050031 28.080 349 199 8 52 392 62 366 3.05e-37 138
Msa1254170 MtrunA17_Chr4g0045441 31.454 337 169 12 52 368 26 320 3.98e-37 137
Msa1254170 MtrunA17_Chr5g0412681 28.613 346 179 9 52 385 33 322 5.88e-37 137
Msa1254170 MtrunA17_Chr8g0371921 27.164 335 195 8 51 382 38 326 9.97e-37 137
Msa1254170 MtrunA17_Chr3g0125201 27.653 311 175 4 52 358 3 267 1.97e-36 134
Msa1254170 MtrunA17_Chr4g0045451 30.636 346 177 12 52 377 26 328 3.35e-36 135
Msa1254170 MtrunA17_Chr8g0351101 29.915 351 196 8 50 390 52 362 3.79e-36 135
Msa1254170 MtrunA17_Chr4g0045411 29.730 333 177 11 52 369 30 320 9.09e-36 134
Msa1254170 MtrunA17_Chr3g0126741 27.778 324 184 8 52 370 59 337 2.42e-35 133
Msa1254170 MtrunA17_Chr5g0426891 27.794 349 198 9 27 369 17 317 1.25e-34 130
Msa1254170 MtrunA17_Chr6g0474391 28.852 357 195 10 49 390 61 373 1.51e-34 131
Msa1254170 MtrunA17_Chr1g0162321 29.446 343 172 11 51 368 68 365 2.67e-34 131
Msa1254170 MtrunA17_Chr1g0187831 27.247 356 199 9 48 391 66 373 3.13e-34 130
Msa1254170 MtrunA17_Chr2g0311921 28.923 325 179 10 52 369 54 333 3.18e-34 130
Msa1254170 MtrunA17_Chr2g0311761 28.571 322 180 8 52 367 68 345 7.59e-34 129
Msa1254170 MtrunA17_Chr1g0162351 29.446 343 172 11 51 368 68 365 1.31e-33 129
Msa1254170 MtrunA17_Chr1g0184101 28.035 346 202 7 27 370 15 315 2.75e-33 127
Msa1254170 MtrunA17_Chr1g0184161 26.480 321 191 6 52 370 38 315 3.24e-33 127
Msa1254170 MtrunA17_Chr1g0184121 27.987 318 185 6 52 367 37 312 6.20e-33 126
Msa1254170 MtrunA17_Chr2g0311701 29.305 331 181 7 46 367 63 349 1.18e-32 126
Msa1254170 MtrunA17_Chr8g0354261 28.492 358 200 10 46 392 62 374 2.96e-32 125
Msa1254170 MtrunA17_Chr1g0184151 26.480 321 191 6 52 370 38 315 3.44e-32 124
Msa1254170 MtrunA17_Chr2g0311681 28.829 333 180 8 46 367 57 343 7.35e-32 124
Msa1254170 MtrunA17_Chr5g0439011 26.861 309 176 7 53 358 6 267 8.39e-32 122
Msa1254170 MtrunA17_Chr7g0220011 26.807 332 190 7 52 377 39 323 8.81e-32 122
Msa1254170 MtrunA17_Chr8g0336781 28.977 352 193 13 52 392 95 400 9.34e-32 124
Msa1254170 MtrunA17_Chr1g0204181 28.242 347 196 9 49 385 56 359 2.71e-31 122
Msa1254170 MtrunA17_Chr8g0336851 26.857 350 202 9 52 392 60 364 3.01e-31 122
Msa1254170 MtrunA17_Chr1g0184111 26.844 339 202 7 52 388 37 331 3.66e-31 121
Msa1254170 MtrunA17_Chr8g0354241 28.212 358 201 10 46 392 62 374 4.74e-31 122
Msa1254170 MtrunA17_Chr1g0184241 28.035 346 193 10 27 367 46 340 5.04e-31 121
Msa1254170 MtrunA17_Chr7g0235951 27.654 358 201 12 47 392 62 373 7.02e-31 121
Msa1254170 MtrunA17_Chr1g0167951 26.629 353 205 10 48 392 49 355 1.03e-30 120
Msa1254170 MtrunA17_Chr1g0187821 26.149 348 197 11 46 383 61 358 1.06e-30 120
Msa1254170 MtrunA17_Chr8g0336861 27.193 342 192 12 52 384 60 353 2.10e-30 119
Msa1254170 MtrunA17_Chr8g0336761 27.066 351 200 10 52 392 60 364 2.61e-30 119
Msa1254170 MtrunA17_Chr6g0472861 25.948 343 197 11 46 380 64 357 2.79e-30 119
Msa1254170 MtrunA17_Chr4g0011311 32.618 233 149 5 48 278 63 289 2.92e-30 118
Msa1254170 MtrunA17_Chr2g0311631 27.401 354 197 10 52 392 55 361 3.29e-30 119
Msa1254170 MtrunA17_Chr8g0336631 26.989 352 200 10 52 392 60 365 3.77e-30 119
Msa1254170 MtrunA17_Chr6g0488511 26.036 338 190 7 52 384 3 285 5.84e-30 117
Msa1254170 MtrunA17_Chr5g0420881 34.807 181 78 2 214 392 2 144 6.38e-30 112
Msa1254170 MtrunA17_Chr3g0093741 28.571 357 200 11 43 392 46 354 8.00e-30 118
Msa1254170 MtrunA17_Chr7g0265351 28.333 360 196 12 43 392 30 337 8.14e-30 117
Msa1254170 MtrunA17_Chr3g0093761 28.426 394 213 12 11 392 17 353 8.79e-30 117
Msa1254170 MtrunA17_Chr2g0311831 27.950 322 181 8 52 367 68 344 9.37e-30 118
Msa1254170 MtrunA17_Chr2g0311741 28.280 343 194 10 46 383 21 316 1.03e-29 117
Msa1254170 MtrunA17_Chr1g0187811 27.143 350 193 12 46 383 182 481 1.11e-29 119
Msa1254170 MtrunA17_Chr3g0130391 28.358 335 185 9 41 362 55 347 1.30e-29 118
Msa1254170 MtrunA17_Chr4g0045431 30.128 312 161 10 72 368 51 320 2.04e-29 117
Msa1254170 MtrunA17_Chr8g0336751 27.273 352 197 9 52 392 94 397 2.55e-29 117
Msa1254170 MtrunA17_Chr3g0093751 29.006 362 192 12 43 392 46 354 2.76e-29 116
Msa1254170 MtrunA17_Chr4g0045461 30.769 338 173 12 52 370 26 321 3.09e-29 116
Msa1254170 MtrunA17_Chr8g0348081 27.557 352 197 13 52 392 60 364 3.52e-29 116
Msa1254170 MtrunA17_Chr8g0364471 27.385 325 182 8 52 367 67 346 3.85e-29 116
Msa1254170 MtrunA17_Chr2g0311691 28.135 327 178 8 52 367 63 343 3.98e-29 116
Msa1254170 MtrunA17_Chr7g0225881 26.284 331 189 9 45 367 60 343 7.56e-29 115
Msa1254170 MtrunA17_Chr2g0319491 27.300 337 178 12 52 382 33 308 8.83e-29 114
Msa1254170 MtrunA17_Chr2g0311711 28.704 324 177 9 52 367 67 344 1.03e-28 115
Msa1254170 MtrunA17_Chr4g0066121 28.086 324 180 9 52 367 60 338 2.31e-28 114
Msa1254170 MtrunA17_Chr1g0167961 27.103 321 185 7 52 367 69 345 3.84e-28 113
Msa1254170 MtrunA17_Chr1g0191201 27.190 331 188 7 40 359 41 329 7.04e-28 113
Msa1254170 MtrunA17_Chr2g0311861 28.000 350 177 12 52 392 64 347 1.18e-27 112
Msa1254170 MtrunA17_Chr8g0358941 27.273 330 176 11 52 367 27 306 1.21e-27 111
Msa1254170 MtrunA17_Chr7g0235981 25.680 331 190 7 74 392 41 327 2.04e-27 110
Msa1254170 MtrunA17_Chr2g0285931 25.000 328 185 9 52 367 28 306 3.26e-27 110
Msa1254170 MtrunA17_Chr4g0055591 26.957 345 194 10 47 383 55 349 3.45e-27 110
Msa1254170 MtrunA17_Chr8g0384461 24.543 383 217 11 19 385 19 345 4.57e-27 110
Msa1254170 MtrunA17_Chr7g0236011 28.818 347 192 10 46 383 61 361 6.67e-27 110
Msa1254170 MtrunA17_Chr1g0161041 27.928 333 188 9 44 370 85 371 9.87e-27 110
Msa1254170 MtrunA17_Chr7g0266651 26.389 360 202 12 46 392 53 362 1.15e-26 109
Msa1254170 MtrunA17_Chr1g0161081 27.439 328 190 8 44 367 62 345 5.29e-26 107
Msa1254170 MtrunA17_Chr3g0125421 25.656 343 198 8 27 359 17 312 5.78e-26 107
Msa1254170 MtrunA17_Chr8g0362741 31.489 235 138 7 46 278 61 274 8.25e-26 105
Msa1254170 MtrunA17_Chr1g0167911 25.155 322 189 9 52 367 54 329 1.17e-25 106
Msa1254170 MtrunA17_Chr4g0053251 26.543 324 178 8 52 355 8 291 1.99e-25 105
Msa1254170 MtrunA17_Chr8g0384481 26.912 353 203 12 46 389 53 359 2.01e-25 106
Msa1254170 MtrunA17_Chr1g0161111 28.354 328 187 8 44 367 121 404 2.18e-25 107
Msa1254170 MtrunA17_Chr8g0375661 34.615 156 97 2 14 167 17 169 1.90e-24 98.6
Msa1254170 MtrunA17_Chr2g0313111 27.273 319 172 11 52 361 28 295 2.42e-24 102
Msa1254170 MtrunA17_Chr1g0148771 28.205 312 163 10 52 359 63 317 2.43e-24 102
Msa1254170 MtrunA17_Chr7g0220001 24.658 292 169 5 81 366 66 312 2.52e-24 102
Msa1254170 MtrunA17_Chr8g0335411 26.816 358 206 10 46 392 61 373 2.66e-24 102
Msa1254170 MtrunA17_Chr8g0375641 32.065 184 115 4 3 184 8 183 3.66e-24 98.2
Msa1254170 MtrunA17_Chr4g0075471 31.410 156 69 1 205 360 21 138 6.94e-23 94.4
Msa1254170 MtrunA17_Chr3g0092531 25.714 315 180 9 52 360 6 272 4.96e-22 95.5
Msa1254170 MtrunA17_Chr6g0486831 27.434 339 180 15 54 369 20 315 1.16e-21 95.1
Msa1254170 MtrunA17_Chr5g0394071 31.455 213 95 6 170 382 5 166 1.19e-21 91.7
Msa1254170 MtrunA17_Chr7g0247991 25.141 354 203 9 46 387 61 364 1.38e-21 95.1
Msa1254170 MtrunA17_Chr4g0004061 26.761 355 208 11 44 392 1 309 1.64e-21 94.0
Msa1254170 MtrunA17_Chr3g0126761 28.111 217 115 4 167 382 44 220 2.82e-21 91.7
Msa1254170 MtrunA17_Chr4g0004071 27.119 236 128 6 158 392 116 308 2.98e-21 93.2
Msa1254170 MtrunA17_Chr7g0233661 33.690 187 74 5 196 382 4 140 3.70e-20 86.7
Msa1254170 MtrunA17_Chr4g0068891 26.220 328 179 11 52 368 20 295 8.01e-20 89.4
Msa1254170 MtrunA17_Chr4g0066991 25.872 344 184 10 47 383 62 341 2.13e-19 88.6
Msa1254170 MtrunA17_Chr1g0170631 29.353 201 93 5 199 392 34 192 3.30e-19 85.1
Msa1254170 MtrunA17_Chr8g0364171 36.607 112 69 2 167 278 18 127 3.78e-19 83.2
Msa1254170 MtrunA17_Chr3g0105281 25.466 322 176 9 52 366 34 298 7.43e-19 86.7
Msa1254170 MtrunA17_Chr1g0167931 24.062 320 157 7 52 367 54 291 1.81e-18 85.5
Msa1254170 MtrunA17_Chr8g0389941 24.405 336 192 12 54 369 33 326 2.74e-18 85.5
Msa1254170 MtrunA17_Chr8g0375581 42.529 87 47 1 187 273 2 85 4.12e-18 78.6
Msa1254170 MtrunA17_Chr1g0158021 30.568 229 140 8 48 269 45 261 5.39e-18 83.2
Msa1254170 MtrunA17_Chr4g0009541 25.688 327 193 12 52 370 7 291 9.26e-17 80.5
Msa1254170 MtrunA17_Chr3g0138351 26.301 346 195 15 48 380 3 301 9.83e-17 80.5
Msa1254170 MtrunA17_Chr8g0375591 35.878 131 80 2 6 134 2 130 1.03e-16 76.3
Msa1254170 MtrunA17_Chr4g0055911 25.948 343 182 14 48 370 5 295 1.07e-16 80.5
Msa1254170 MtrunA17_Chr4g0055871 25.959 339 176 14 51 370 8 290 2.79e-16 79.0
Msa1254170 MtrunA17_Chr8g0336831 30.000 190 122 7 52 236 60 243 1.45e-15 75.9
Msa1254170 MtrunA17_Chr5g0420891 30.435 161 103 3 9 167 6 159 3.62e-15 72.8
Msa1254170 MtrunA17_Chr1g0158011 25.818 275 147 9 98 366 10 233 4.56e-15 74.7
Msa1254170 MtrunA17_Chr2g0319521 31.579 114 76 2 165 278 14 125 8.31e-15 71.2
Msa1254170 MtrunA17_Chr8g0336801 27.717 184 89 4 214 392 12 156 1.82e-14 70.5
Msa1254170 MtrunA17_Chr4g0037611 30.818 159 69 5 188 345 12 130 2.21e-13 68.2
Msa1254170 MtrunA17_Chr1g0167921 31.008 129 79 5 149 276 37 156 5.95e-13 66.6
Msa1254170 MtrunA17_Chr2g0311611 44.286 70 33 1 214 277 2 71 9.45e-13 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1254170 AT1G49390.1 45.238 378 167 3 13 389 7 345 1.19e-115 341
Msa1254170 AT5G20400.1 44.974 378 168 3 13 389 7 345 6.77e-115 339
Msa1254170 AT5G54000.2 44.675 385 166 5 13 392 7 349 1.68e-113 335
Msa1254170 AT5G20550.1 44.855 379 168 4 13 389 7 346 2.92e-113 335
Msa1254170 AT1G49390.2 48.355 304 119 1 86 389 1 266 1.85e-104 309
Msa1254170 AT5G54000.1 46.906 307 125 1 86 392 1 269 4.95e-103 306
Msa1254170 AT3G21420.1 36.883 385 197 7 15 392 17 362 8.32e-71 226
Msa1254170 AT1G17020.1 34.783 345 184 3 51 392 52 358 5.53e-66 214
Msa1254170 AT1G17010.1 34.026 385 206 5 14 392 16 358 1.45e-65 213
Msa1254170 AT1G78550.1 34.043 376 200 6 21 392 25 356 3.73e-64 209
Msa1254170 AT4G25300.1 36.533 323 159 3 51 369 51 331 1.09e-63 208
Msa1254170 AT2G38240.1 33.537 328 173 4 46 370 42 327 1.36e-63 207
Msa1254170 AT4G25310.1 37.072 321 153 4 51 367 51 326 4.09e-60 198
Msa1254170 AT5G05600.1 33.140 344 187 5 51 389 61 366 9.04e-59 196
Msa1254170 AT1G78550.2 34.700 317 163 5 79 392 3 278 8.18e-56 185
Msa1254170 AT3G11180.2 32.571 350 190 6 45 391 88 394 1.07e-54 186
Msa1254170 AT3G11180.1 32.849 344 185 6 45 385 88 388 2.27e-54 185
Msa1254170 AT3G55970.1 32.188 320 174 5 52 366 52 333 1.12e-51 177
Msa1254170 AT4G22880.1 30.154 325 181 6 51 368 46 331 1.97e-51 176
Msa1254170 AT4G22880.2 30.154 325 181 6 51 368 46 331 1.97e-51 176
Msa1254170 AT4G22880.3 30.154 325 181 6 51 368 46 331 1.97e-51 176
Msa1254170 AT5G08640.2 30.029 343 188 9 52 388 40 336 4.19e-50 172
Msa1254170 AT5G08640.1 30.029 343 188 9 52 388 40 336 4.19e-50 172
Msa1254170 AT5G05600.2 36.522 230 143 2 51 277 61 290 1.12e-47 164
Msa1254170 AT3G60290.1 31.856 361 192 10 40 391 38 353 4.11e-47 164
Msa1254170 AT2G36690.2 32.044 362 193 10 13 366 19 335 2.45e-46 163
Msa1254170 AT2G36690.1 32.044 362 193 10 13 366 19 335 2.45e-46 163
Msa1254170 AT2G44800.1 33.333 321 170 6 48 366 48 326 2.47e-46 162
Msa1254170 AT4G10500.1 30.539 334 181 9 52 382 44 329 1.24e-44 158
Msa1254170 AT4G16330.2 32.370 346 177 10 52 390 67 362 4.32e-44 157
Msa1254170 AT3G55970.2 33.884 242 153 5 52 288 52 291 1.27e-42 151
Msa1254170 AT1G55290.1 29.974 387 208 12 11 388 25 357 4.50e-42 151
Msa1254170 AT5G24530.1 30.137 365 189 10 36 382 7 323 1.39e-41 149
Msa1254170 AT4G10490.1 28.818 347 196 10 52 391 42 344 1.61e-41 149
Msa1254170 AT5G07480.1 29.050 358 190 11 52 392 44 354 3.66e-41 149
Msa1254170 AT3G13610.1 30.312 353 193 8 46 392 56 361 6.38e-41 148
Msa1254170 AT4G25310.2 31.933 357 167 8 14 367 15 298 1.29e-40 146
Msa1254170 AT3G19010.1 32.036 334 170 10 52 370 28 319 2.62e-40 146
Msa1254170 AT3G19010.4 32.036 334 170 10 52 370 28 319 2.62e-40 146
Msa1254170 AT1G62380.1 27.405 343 199 7 47 386 2 297 3.55e-39 142
Msa1254170 AT5G07200.1 30.704 355 192 8 52 392 58 372 3.41e-38 141
Msa1254170 AT5G63600.2 26.959 319 182 8 48 363 29 299 5.62e-38 139
Msa1254170 AT1G12010.1 27.697 343 198 8 47 386 2 297 6.92e-38 139
Msa1254170 AT3G19000.1 31.373 357 178 12 27 367 16 321 1.16e-37 139
Msa1254170 AT4G16330.1 32.667 300 151 9 98 390 1 256 2.38e-37 136
Msa1254170 AT5G63600.1 26.646 319 182 7 48 363 29 298 4.27e-37 137
Msa1254170 AT1G60980.1 30.247 324 172 7 50 360 55 337 1.94e-36 137
Msa1254170 AT1G05010.1 29.582 311 168 7 53 359 5 268 2.37e-36 135
Msa1254170 AT5G63580.2 33.188 229 143 6 52 277 19 240 1.47e-35 130
Msa1254170 AT5G63580.1 33.480 227 141 6 52 275 19 238 1.99e-35 130
Msa1254170 AT1G15550.1 28.783 337 186 7 39 369 44 332 2.61e-35 133
Msa1254170 AT5G63590.1 26.567 335 188 8 48 370 10 298 2.70e-35 132
Msa1254170 AT3G19010.3 30.240 334 146 10 52 370 28 289 5.02e-35 131
Msa1254170 AT4G25420.1 29.395 347 191 8 49 385 58 360 7.94e-35 132
Msa1254170 AT1G44090.1 30.031 323 176 7 45 358 56 337 1.02e-34 132
Msa1254170 AT5G59540.1 28.011 357 202 10 46 392 55 366 2.06e-34 131
Msa1254170 AT3G19000.2 33.955 268 148 10 27 278 16 270 2.09e-34 129
Msa1254170 AT3G51240.1 25.150 334 201 7 52 382 38 325 2.40e-34 130
Msa1254170 AT5G63595.1 26.645 304 155 8 44 345 19 256 6.20e-34 127
Msa1254170 AT5G43935.1 26.646 319 161 10 52 363 19 271 1.11e-33 127
Msa1254170 AT3G19010.2 34.855 241 138 8 52 277 28 264 5.42e-33 125
Msa1254170 AT1G80340.1 29.513 349 183 11 27 366 28 322 4.09e-32 124
Msa1254170 AT2G30830.1 27.479 353 204 10 48 392 50 358 1.09e-31 123
Msa1254170 AT3G12900.1 26.957 345 190 11 55 388 59 352 1.13e-31 123
Msa1254170 AT1G80330.1 26.420 352 198 12 52 392 49 350 1.49e-31 123
Msa1254170 AT5G43440.1 27.557 352 202 10 49 392 59 365 1.77e-31 123
Msa1254170 AT1G06620.1 28.659 328 185 8 45 367 55 338 2.22e-31 122
Msa1254170 AT5G43450.1 28.483 323 180 8 52 369 61 337 2.30e-31 122
Msa1254170 AT1G77330.1 26.774 310 173 6 52 354 3 265 2.73e-31 121
Msa1254170 AT5G51810.1 28.530 347 192 8 53 385 54 358 3.05e-31 122
Msa1254170 AT1G78440.1 26.829 328 176 12 52 366 18 294 5.85e-31 120
Msa1254170 AT5G59530.1 28.182 330 185 8 46 367 52 337 1.20e-30 120
Msa1254170 AT5G43450.2 32.456 228 146 5 52 278 61 281 2.81e-30 118
Msa1254170 AT1G06620.2 32.479 234 150 5 45 276 55 282 3.41e-30 117
Msa1254170 AT4G25420.2 32.636 239 149 5 49 278 58 293 5.65e-30 117
Msa1254170 AT1G04380.1 28.090 356 194 10 48 392 41 345 7.43e-30 118
Msa1254170 AT5G43440.2 31.466 232 151 5 49 278 59 284 8.39e-30 117
Msa1254170 AT1G06650.2 28.409 352 195 12 52 392 64 369 1.33e-29 118
Msa1254170 AT4G25300.2 33.654 208 92 3 166 369 72 237 3.00e-29 114
Msa1254170 AT5G59540.2 30.085 236 155 6 46 277 55 284 3.25e-29 115
Msa1254170 AT1G06640.1 28.255 361 184 14 52 392 64 369 8.49e-29 115
Msa1254170 AT1G06645.1 27.920 351 195 12 52 392 77 379 1.39e-28 115
Msa1254170 AT5G07480.2 29.278 263 130 7 143 392 26 245 1.95e-28 112
Msa1254170 AT1G04380.2 32.627 236 142 6 48 278 41 264 2.67e-28 112
Msa1254170 AT1G03410.2 26.888 331 189 10 45 367 50 335 4.14e-28 114
Msa1254170 AT1G03410.1 26.888 331 189 10 45 367 87 372 5.56e-28 114
Msa1254170 AT4G21200.1 26.471 374 205 12 28 390 10 324 5.62e-28 113
Msa1254170 AT3G51240.2 26.056 284 162 6 101 382 4 241 6.48e-28 111
Msa1254170 AT1G04350.1 28.286 350 186 13 46 383 52 348 1.46e-27 112
Msa1254170 AT5G12270.1 26.836 354 196 8 52 392 56 359 2.58e-27 111
Msa1254170 AT3G61400.1 27.761 335 187 8 45 367 53 344 9.00e-27 110
Msa1254170 AT2G19590.1 26.627 338 191 10 43 376 2 286 3.73e-26 107
Msa1254170 AT1G06640.2 30.417 240 138 8 52 278 64 287 2.20e-25 105
Msa1254170 AT1G06650.1 28.936 235 156 6 52 282 64 291 4.35e-25 104
Msa1254170 AT1G06640.3 30.638 235 134 8 52 273 64 282 4.45e-25 103
Msa1254170 AT5G51810.2 30.081 246 156 6 53 284 54 297 5.33e-25 103
Msa1254170 AT1G30040.1 25.545 321 185 9 55 367 31 305 7.45e-25 104
Msa1254170 AT3G61400.2 29.876 241 156 5 45 277 53 288 1.89e-24 102
Msa1254170 AT3G46500.5 26.966 356 196 15 52 391 17 324 2.92e-24 102
Msa1254170 AT2G30840.1 26.506 332 193 9 43 367 48 335 1.36e-23 101
Msa1254170 AT4G21690.1 26.048 334 188 9 45 367 40 325 1.63e-23 100
Msa1254170 AT2G30840.2 28.333 240 162 5 43 278 48 281 1.23e-22 97.4
Msa1254170 AT3G49630.1 25.617 324 182 7 52 355 9 293 3.62e-22 96.7
Msa1254170 AT2G30840.3 28.151 238 161 5 43 276 48 279 4.03e-22 97.1
Msa1254170 AT3G49630.3 25.723 311 181 6 56 355 18 289 7.41e-22 95.9
Msa1254170 AT1G03400.2 26.822 343 197 12 57 373 42 356 1.12e-21 95.9
Msa1254170 AT3G46500.7 28.065 310 160 14 52 345 17 279 5.09e-21 92.8
Msa1254170 AT2G25450.1 24.090 357 217 10 45 392 48 359 8.01e-21 93.2
Msa1254170 AT1G52820.1 25.414 362 213 12 37 391 1 312 2.11e-20 91.3
Msa1254170 AT1G35190.1 27.635 351 183 16 55 382 15 317 2.86e-20 91.3
Msa1254170 AT2G19590.2 25.839 298 165 9 83 376 26 271 3.11e-20 90.5
Msa1254170 AT1G30040.2 26.840 231 153 8 55 277 31 253 4.03e-20 89.7
Msa1254170 AT1G03400.1 25.672 335 183 10 57 373 42 328 1.05e-19 90.1
Msa1254170 AT2G34555.1 25.077 323 184 11 52 366 27 299 4.95e-19 87.8
Msa1254170 AT3G46490.1 27.174 368 175 17 52 381 9 321 3.80e-17 82.0
Msa1254170 AT3G46490.2 28.012 332 147 16 52 344 9 287 1.19e-15 77.4
Msa1254170 AT1G14130.1 23.602 322 190 8 52 369 9 278 2.95e-14 73.6
Msa1254170 AT5G58660.2 24.409 254 159 8 49 278 31 275 2.03e-13 70.5

Find 111 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATTCTTGTGGCTTCTTTC+TGG 0.080795 8_2:+52202185 Msa1254170:CDS
TAAGCTTTAATTTAAGAATT+TGG 0.157768 8_2:+52205650 Msa1254170:three_prime_UTR
TGAATCTCTTTCTCTGAATC+TGG 0.180143 8_2:-52205431 None:intergenic
ACCTGAAATCAATGGGGTTT+TGG 0.196014 8_2:-52202561 None:intergenic
TCATTATAGATATAATTATT+TGG 0.207972 8_2:-52202033 None:intergenic
GGTGGGTGCTCGCAGCAATT+TGG 0.216062 8_2:-52203881 None:intergenic
GTGGGTGCTCGCAGCAATTT+GGG 0.228023 8_2:-52203880 None:intergenic
CCCAAAACCCCATTGATTTC+AGG 0.235480 8_2:+52202560 Msa1254170:CDS
CTTTCATCTCACAGACTTCC+TGG 0.279980 8_2:-52205589 None:intergenic
CAAAACAATATTGAAGGATA+TGG 0.284911 8_2:+52202439 Msa1254170:CDS
TACAAAACTTCTTTAGTCTA+TGG 0.287867 8_2:+52205905 Msa1254170:three_prime_UTR
CACGCTAACTCTAATTAAAT+AGG 0.310510 8_2:+52205937 Msa1254170:three_prime_UTR
CAGAAAATCAAATGCTTGAT+TGG 0.314111 8_2:+52202479 Msa1254170:CDS
TCCTATGGCTGATCATGCTC+TGG 0.314307 8_2:+52203110 Msa1254170:CDS
TTGATTGCACCTCTAAATAT+AGG 0.319809 8_2:-52205999 None:intergenic
CTCTCTCTCCACATTCCTTT+AGG 0.320419 8_2:-52203050 None:intergenic
ACGTATTATTCTATCTGATT+AGG 0.325774 8_2:+52205696 Msa1254170:three_prime_UTR
AGTACTACCAACAAGGAAAA+AGG 0.333621 8_2:+52205531 Msa1254170:CDS
TTTACTGGTCTGTATAATAC+TGG 0.341137 8_2:-52205485 None:intergenic
CTTGTAACGCTTTACAATTA+CGG 0.350143 8_2:-52203811 None:intergenic
AACAATATACCGAATGTATC+TGG 0.350766 8_2:+52202965 Msa1254170:CDS
ATCAAAGGAATTTCAAACTT+TGG 0.350874 8_2:+52202536 Msa1254170:CDS
ACAAGAGCATCATGGATTAT+TGG 0.359537 8_2:-52203234 None:intergenic
AATCTAATCAAAATGCTTCC+AGG 0.381648 8_2:+52205571 Msa1254170:exon
AGGACATGGAGGGTAGTAAT+TGG 0.385875 8_2:-52203091 None:intergenic
ATCTATAATGAAGGTGGTGT+TGG 0.409589 8_2:+52202045 Msa1254170:CDS
ATAGCTTGAGTCATATTAGA+TGG 0.409856 8_2:+52205852 Msa1254170:three_prime_UTR
AATTTATACCTGAAATCAAT+GGG 0.410650 8_2:-52202568 None:intergenic
TTTACCACTACTCTGTGTAT+TGG 0.412856 8_2:-52205368 None:intergenic
ATGAATCAGAATGTGGCTTC+AGG 0.416306 8_2:-52203134 None:intergenic
ACTGGTTATCTTTGAGAACT+TGG 0.422799 8_2:-52203200 None:intergenic
TGGTGACATCCTATATTTAG+AGG 0.426974 8_2:+52205990 Msa1254170:three_prime_UTR
CATTCAAACGTGCAACATAC+TGG 0.433551 8_2:+52201857 Msa1254170:five_prime_UTR
TTGAAATTCCTTTGATCTTG+AGG 0.440037 8_2:-52202529 None:intergenic
GCGTTACAAGTTGGCAATGA+TGG 0.440803 8_2:+52203824 Msa1254170:CDS
GAATTTATACCTGAAATCAA+TGG 0.446659 8_2:-52202569 None:intergenic
CAAGCTGCACTTCATTCTTG+TGG 0.451802 8_2:+52202174 Msa1254170:CDS
TGAGATAGTTGGTAGTAAAT+CGG 0.451831 8_2:+52201975 Msa1254170:CDS
AGCTCATGTTGTGAAGTAGA+TGG 0.457466 8_2:-52202141 None:intergenic
GGAAGAGGATTGTTTCCTAA+AGG 0.458189 8_2:+52203035 Msa1254170:CDS
CCTTGATGGTTACAGATATC+GGG 0.458712 8_2:+52203786 Msa1254170:intron
ATGATAAAGGAGGCCAAGTA+GGG 0.468508 8_2:-52206044 None:intergenic
GATTAATGTTGGTGATCAAA+TGG 0.470053 8_2:+52203257 Msa1254170:CDS
TGCTCATCTATGTGGTCCAT+TGG 0.470338 8_2:-52201830 None:intergenic
TCGTTCACTAGTTTGTCAAC+CGG 0.473542 8_2:-52205455 None:intergenic
GAATCTCTTTCTCTGAATCT+GGG 0.476860 8_2:-52205430 None:intergenic
TTATTGGAACTTTAAACCAC+TGG 0.480568 8_2:-52203218 None:intergenic
AGCATGTCACCTACCCTACT+TGG 0.484401 8_2:+52206031 Msa1254170:three_prime_UTR
AATAATTATATCTATAATGA+AGG 0.493436 8_2:+52202036 Msa1254170:CDS
AGTAGTGGTAAATGCAGAAA+GGG 0.496294 8_2:+52205379 Msa1254170:CDS
AGGGAACAAAACAATATTGA+AGG 0.499241 8_2:+52202433 Msa1254170:CDS
AAATATAGGATGTCACCATA+TGG 0.501737 8_2:-52205985 None:intergenic
TCGGCAGAGGTTGAGATAGT+TGG 0.502686 8_2:+52201964 Msa1254170:CDS
ATATACAGATAATGAGCAAT+GGG 0.504522 8_2:+52205333 Msa1254170:intron
GGTTATCTTTGAGAACTTGG+AGG 0.510231 8_2:-52203197 None:intergenic
ATATAACTGCCAGATACATT+CGG 0.510757 8_2:-52202974 None:intergenic
CATGGCGAAGACACTGAACT+TGG 0.514251 8_2:+52203014 Msa1254170:CDS
TTCAGAGAAAGAGATTCAAC+CGG 0.515663 8_2:+52205436 Msa1254170:CDS
TTACTACCCTCCATGTCCTA+TGG 0.516124 8_2:+52203095 Msa1254170:CDS
AGTAGATGGAGAAGTGAGGT+TGG 0.516853 8_2:-52202127 None:intergenic
GATGATAAAGGAGGCCAAGT+AGG 0.520122 8_2:-52206045 None:intergenic
CGAGCACCCACCCATGGAGA+GGG 0.525848 8_2:+52203892 Msa1254170:CDS
TAGTAAATCGGTTCAAGAGT+TGG 0.532912 8_2:+52201987 Msa1254170:CDS
GCTCGTTTCTTGACAAAGTG+AGG 0.541459 8_2:+52202356 Msa1254170:CDS
AAGAATTTGGTGCTTGCAAG+AGG 0.542795 8_2:+52205663 Msa1254170:three_prime_UTR
CACAAGAATGAAGTGCAGCT+TGG 0.546880 8_2:-52202173 None:intergenic
ACATAACCCCTCTCCATGGG+TGG 0.556536 8_2:-52203899 None:intergenic
CCTATGGCTGATCATGCTCT+GGG 0.557427 8_2:+52203111 Msa1254170:CDS
TGGTAAATGCAGAAAGGGAA+AGG 0.560475 8_2:+52205384 Msa1254170:CDS
GCATGATCAGCCATAGGACA+TGG 0.560749 8_2:-52203105 None:intergenic
GATGCTCTTGTGATTAATGT+TGG 0.560795 8_2:+52203246 Msa1254170:CDS
AATTGTAAAGCGTTACAAGT+TGG 0.563275 8_2:+52203815 Msa1254170:CDS
AGGTTGGCAATGTCAATGAT+TGG 0.563323 8_2:-52202111 None:intergenic
AATTATATCTATAATGAAGG+TGG 0.563549 8_2:+52202039 Msa1254170:CDS
CATTAATCACAAGAGCATCA+TGG 0.564097 8_2:-52203242 None:intergenic
GAGTAGTGGTAAATGCAGAA+AGG 0.567843 8_2:+52205378 Msa1254170:CDS
GAAGACACTGAACTTGGAAG+AGG 0.567942 8_2:+52203020 Msa1254170:CDS
CAAGTTCAGTGTCTTCGCCA+TGG 0.571848 8_2:-52203013 None:intergenic
GATATATGTTAAATATCCAA+TGG 0.575035 8_2:+52201814 Msa1254170:five_prime_UTR
TTGCTGCGAGCACCCACCCA+TGG 0.575561 8_2:+52203886 Msa1254170:CDS
CTCGTTTCTTGACAAAGTGA+GGG 0.576302 8_2:+52202357 Msa1254170:CDS
GACACATAACCCCTCTCCAT+GGG 0.582435 8_2:-52203902 None:intergenic
TTATAGATATAATTATTTGG+TGG 0.585099 8_2:-52202030 None:intergenic
GAAACGAGCTTGTCATCCCA+TGG 0.585363 8_2:-52202342 None:intergenic
GGACACATAACCCCTCTCCA+TGG 0.587393 8_2:-52203903 None:intergenic
GCGAGCACCCACCCATGGAG+AGG 0.589350 8_2:+52203891 Msa1254170:CDS
ACATGAAAATCTGATTCTGA+AGG 0.589628 8_2:-52202087 None:intergenic
GATTGTTTCCTAAAGGAATG+TGG 0.591700 8_2:+52203042 Msa1254170:CDS
AATATACAGATAATGAGCAA+TGG 0.593689 8_2:+52205332 Msa1254170:intron
AGGTACATCCTCAAGATCAA+AGG 0.594954 8_2:+52202521 Msa1254170:CDS
ACAAACTAGTGAACGAGTCA+AGG 0.596933 8_2:+52205462 Msa1254170:CDS
CTAAAGGAATGTGGAGAGAG+AGG 0.597062 8_2:+52203051 Msa1254170:CDS
GCTGTTCAGGTGATAAACCA+TGG 0.598562 8_2:+52202325 Msa1254170:intron
CTGTTCAGGTGATAAACCAT+GGG 0.603760 8_2:+52202326 Msa1254170:intron
TGGGTGCTCGCAGCAATTTG+GGG 0.624881 8_2:-52203879 None:intergenic
AATGCAGATGCTCATCTATG+TGG 0.627232 8_2:-52201838 None:intergenic
CATAACCCCTCTCCATGGGT+GGG 0.632835 8_2:-52203898 None:intergenic
TAAAGGAGGCCAAGTAGGGT+AGG 0.633239 8_2:-52206040 None:intergenic
ATAGATGATGAATCAGAATG+TGG 0.639173 8_2:-52203141 None:intergenic
CCCAGAGCATGATCAGCCAT+AGG 0.646801 8_2:-52203111 None:intergenic
GAGTCCAATACACAGAGTAG+TGG 0.648084 8_2:+52205364 Msa1254170:CDS
GTGAAGTAGATGGAGAAGTG+AGG 0.653571 8_2:-52202131 None:intergenic
TTACAAGTTGGCAATGATGG+AGG 0.654108 8_2:+52203827 Msa1254170:CDS
AAGTTCTCAAAGATAACCAG+TGG 0.660926 8_2:+52203202 Msa1254170:CDS
ATTTATACCTGAAATCAATG+GGG 0.672971 8_2:-52202567 None:intergenic
GAGCACCCACCCATGGAGAG+GGG 0.673204 8_2:+52203893 Msa1254170:CDS
TGATCAGCCATAGGACATGG+AGG 0.676264 8_2:-52203102 None:intergenic
GATCAGCCATAGGACATGGA+GGG 0.682438 8_2:-52203101 None:intergenic
TAATGTTGGTGATCAAATGG+AGG 0.693090 8_2:+52203260 Msa1254170:CDS
TTTCTCGAGTACTACCAACA+AGG 0.720997 8_2:+52205524 Msa1254170:CDS
TCTCTTTCTCTGAATCTGGG+CGG 0.729749 8_2:-52205427 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATTATAGATATAATTATT+TGG - chr8_2:52202036-52202055 None:intergenic 10.0%
!! AATAATTATATCTATAATGA+AGG + chr8_2:52202036-52202055 Msa1254170:CDS 10.0%
!!! TTTAGATTTAAATGTATTTT+CGG + chr8_2:52202706-52202725 Msa1254170:intron 10.0%
!! AATTTACACATTAAAATAAT+TGG - chr8_2:52204538-52204557 None:intergenic 10.0%
!! ATATTATACATATATATAAG+TGG + chr8_2:52205143-52205162 Msa1254170:intron 10.0%
!! TTATAGATATAATTATTTGG+TGG - chr8_2:52202033-52202052 None:intergenic 15.0%
!! ACATAACTAAAATAAAAGTA+TGG - chr8_2:52202265-52202284 None:intergenic 15.0%
!!! CCATTTAAAATAATATTAAG+TGG - chr8_2:52202598-52202617 None:intergenic 15.0%
!!! CCACTTAATATTATTTTAAA+TGG + chr8_2:52202595-52202614 Msa1254170:intron 15.0%
!!! AAAATAAATTCAAATGGATT+TGG - chr8_2:52202831-52202850 None:intergenic 15.0%
!!! AAATCCATTTGAATTTATTT+TGG + chr8_2:52202830-52202849 Msa1254170:intron 15.0%
!!! AGTTATATGAAGTAATTTTA+AGG + chr8_2:52202989-52203008 Msa1254170:CDS 15.0%
!!! GTTATATGAAGTAATTTTAA+GGG + chr8_2:52202990-52203009 Msa1254170:CDS 15.0%
!!! AAATTGATTATTTGAAATTG+AGG + chr8_2:52203523-52203542 Msa1254170:intron 15.0%
!!! AATTGATTATTTGAAATTGA+GGG + chr8_2:52203524-52203543 Msa1254170:intron 15.0%
!!! AAGTTTTATGTTTTATGTTA+GGG + chr8_2:52204040-52204059 Msa1254170:intron 15.0%
!! TATATATACTATGAAATTGT+GGG - chr8_2:52204388-52204407 None:intergenic 15.0%
!! ATATATATACTATGAAATTG+TGG - chr8_2:52204389-52204408 None:intergenic 15.0%
!!! ACTATTAATTTTTTGTTCTA+TGG + chr8_2:52204586-52204605 Msa1254170:intron 15.0%
!!! TTTTTATTTACACAAAATGT+TGG + chr8_2:52204691-52204710 Msa1254170:intron 15.0%
!! TACATAAGAAATTAAAAGTA+TGG + chr8_2:52204863-52204882 Msa1254170:intron 15.0%
!! TACATAAGAAATTAAAAGTA+TGG + chr8_2:52204863-52204882 Msa1254170:intron 15.0%
!!! TATTTTTACTTATGTTTTCA+AGG + chr8_2:52205298-52205317 Msa1254170:intron 15.0%
!!! TAAGCTTTAATTTAAGAATT+TGG + chr8_2:52205650-52205669 Msa1254170:three_prime_UTR 15.0%
!! GATATATGTTAAATATCCAA+TGG + chr8_2:52201814-52201833 Msa1254170:five_prime_UTR 20.0%
!! CACAATAACAATAACAAAAA+TGG + chr8_2:52201936-52201955 Msa1254170:exon 20.0%
!! AATTATATCTATAATGAAGG+TGG + chr8_2:52202039-52202058 Msa1254170:CDS 20.0%
!! AATTTATACCTGAAATCAAT+GGG - chr8_2:52202571-52202590 None:intergenic 20.0%
!!! AGTAGCAAATACTTTTTTTT+TGG + chr8_2:52202623-52202642 Msa1254170:intron 20.0%
!! TAAAGTATAAAAATATCCCA+TGG - chr8_2:52202675-52202694 None:intergenic 20.0%
!! AACACCAAAATAAATTCAAA+TGG - chr8_2:52202837-52202856 None:intergenic 20.0%
!!! ATTTGAATTTATTTTGGTGT+TGG + chr8_2:52202836-52202855 Msa1254170:intron 20.0%
!!! TAATTTTTTAATCAACAACG+TGG - chr8_2:52203497-52203516 None:intergenic 20.0%
!!! GAAGTTTTATGTTTTATGTT+AGG + chr8_2:52204039-52204058 Msa1254170:intron 20.0%
!! CTATGGAAGATAATTTAAAT+CGG + chr8_2:52204603-52204622 Msa1254170:intron 20.0%
!!! TAATTTAAATCGGTGTTTTA+AGG + chr8_2:52204613-52204632 Msa1254170:intron 20.0%
!! TTATTAAAGAAAACGTCAAT+GGG - chr8_2:52204827-52204846 None:intergenic 20.0%
!! TTTATTAAAGAAAACGTCAA+TGG - chr8_2:52204828-52204847 None:intergenic 20.0%
!! TTATTAAAGAAAACGTCAAT+GGG - chr8_2:52204827-52204846 None:intergenic 20.0%
!! TTTATTAAAGAAAACGTCAA+TGG - chr8_2:52204828-52204847 None:intergenic 20.0%
!! TTATACATATATATAAGTGG+CGG + chr8_2:52205146-52205165 Msa1254170:intron 20.0%
!! ATAAAATTAACAAGTGTCTT+TGG + chr8_2:52205210-52205229 Msa1254170:intron 20.0%
!! AAAGAAAAATTTGAACCATA+TGG + chr8_2:52205970-52205989 Msa1254170:three_prime_UTR 20.0%
!! AATAACAAAAATGGAAGTGT+CGG + chr8_2:52201945-52201964 Msa1254170:exon 25.0%
! TATAAATAAATGTTTGCAGC+TGG - chr8_2:52202242-52202261 None:intergenic 25.0%
!! AAAACAGTTGCGAATAATTT+TGG - chr8_2:52202303-52202322 None:intergenic 25.0%
!!! TATTTTTGCTTTTCTTCCTT+TGG - chr8_2:52202409-52202428 None:intergenic 25.0%
! AAGAAAAGCAAAAATATGCA+AGG + chr8_2:52202413-52202432 Msa1254170:CDS 25.0%
! AGAAAAGCAAAAATATGCAA+GGG + chr8_2:52202414-52202433 Msa1254170:CDS 25.0%
! CAAAACAATATTGAAGGATA+TGG + chr8_2:52202439-52202458 Msa1254170:CDS 25.0%
! ATCAAAGGAATTTCAAACTT+TGG + chr8_2:52202536-52202555 Msa1254170:CDS 25.0%
! ATTTATACCTGAAATCAATG+GGG - chr8_2:52202570-52202589 None:intergenic 25.0%
! GAATTTATACCTGAAATCAA+TGG - chr8_2:52202572-52202591 None:intergenic 25.0%
! TAATACTTTAATAGCTCCAT+GGG + chr8_2:52202656-52202675 Msa1254170:intron 25.0%
! ATATATACCTTACAGTTACA+AGG - chr8_2:52202748-52202767 None:intergenic 25.0%
!!! AATTTATTTTGGTGTTGGTT+TGG + chr8_2:52202841-52202860 Msa1254170:intron 25.0%
!!! ATTTATTTTGGTGTTGGTTT+GGG + chr8_2:52202842-52202861 Msa1254170:intron 25.0%
! ATGTAAATGAAGAATCATGT+CGG + chr8_2:52202914-52202933 Msa1254170:intron 25.0%
!!! TTTTTTGCTGCAAGATAAAA+AGG + chr8_2:52203167-52203186 Msa1254170:CDS 25.0%
! GTCAAACAAAGTTTATAAGT+TGG + chr8_2:52203317-52203336 Msa1254170:intron 25.0%
! TCAAATAACATTGATGTATC+TGG - chr8_2:52203356-52203375 None:intergenic 25.0%
!! TATGTTTTATGTTAGGGAAA+AGG + chr8_2:52204046-52204065 Msa1254170:intron 25.0%
!!! CAGAGCTAGAAATAATTTTT+TGG + chr8_2:52204507-52204526 Msa1254170:intron 25.0%
!!! GCTAGAAATAATTTTTTGGA+TGG + chr8_2:52204511-52204530 Msa1254170:intron 25.0%
! TATTAAAGAAAACGTCAATG+GGG - chr8_2:52204826-52204845 None:intergenic 25.0%
!! AAATTAAAAGTATGGCTAAC+TGG + chr8_2:52204871-52204890 Msa1254170:intron 25.0%
! TATTAAAGAAAACGTCAATG+GGG - chr8_2:52204826-52204845 None:intergenic 25.0%
!! AAATTAAAAGTATGGCTAAC+TGG + chr8_2:52204871-52204890 Msa1254170:intron 25.0%
! AATATACAGATAATGAGCAA+TGG + chr8_2:52205332-52205351 Msa1254170:intron 25.0%
! ATATACAGATAATGAGCAAT+GGG + chr8_2:52205333-52205352 Msa1254170:intron 25.0%
!!! TAGATTTTGAAAGCATCAAT+TGG - chr8_2:52205557-52205576 None:intergenic 25.0%
! ACGTATTATTCTATCTGATT+AGG + chr8_2:52205696-52205715 Msa1254170:three_prime_UTR 25.0%
!! TTTTTCTATGCTTGATATAC+AGG + chr8_2:52205722-52205741 Msa1254170:three_prime_UTR 25.0%
!! AAAATAGCTTTTGTGATGAT+CGG + chr8_2:52205796-52205815 Msa1254170:intron 25.0%
!! TGATACAAACTCACATTTTA+GGG - chr8_2:52205879-52205898 None:intergenic 25.0%
!! TTGATACAAACTCACATTTT+AGG - chr8_2:52205880-52205899 None:intergenic 25.0%
! TACAAAACTTCTTTAGTCTA+TGG + chr8_2:52205905-52205924 Msa1254170:three_prime_UTR 25.0%
!! TGAGATAGTTGGTAGTAAAT+CGG + chr8_2:52201975-52201994 Msa1254170:CDS 30.0%
ACATGAAAATCTGATTCTGA+AGG - chr8_2:52202090-52202109 None:intergenic 30.0%
!!! AATAATTTTGGAGCTTAAGG+AGG - chr8_2:52202291-52202310 None:intergenic 30.0%
!!! GCAATTTTTTGAACTTCCAA+AGG + chr8_2:52202390-52202409 Msa1254170:CDS 30.0%
AGGGAACAAAACAATATTGA+AGG + chr8_2:52202433-52202452 Msa1254170:CDS 30.0%
CAGAAAATCAAATGCTTGAT+TGG + chr8_2:52202479-52202498 Msa1254170:CDS 30.0%
!! GTGTGACAGAATATTTTTGA+AGG + chr8_2:52202501-52202520 Msa1254170:CDS 30.0%
TTGAAATTCCTTTGATCTTG+AGG - chr8_2:52202532-52202551 None:intergenic 30.0%
CTAATACTTTAATAGCTCCA+TGG + chr8_2:52202655-52202674 Msa1254170:intron 30.0%
AACAATATACCGAATGTATC+TGG + chr8_2:52202965-52202984 Msa1254170:CDS 30.0%
ATATAACTGCCAGATACATT+CGG - chr8_2:52202977-52202996 None:intergenic 30.0%
ATAGATGATGAATCAGAATG+TGG - chr8_2:52203144-52203163 None:intergenic 30.0%
TTATTGGAACTTTAAACCAC+TGG - chr8_2:52203221-52203240 None:intergenic 30.0%
!! GATTAATGTTGGTGATCAAA+TGG + chr8_2:52203257-52203276 Msa1254170:CDS 30.0%
!! TCAGTATTTTGAGCTAGAAA+GGG + chr8_2:52203664-52203683 Msa1254170:intron 30.0%
TGTTCAAGTCTCCTTATATA+GGG + chr8_2:52203725-52203744 Msa1254170:intron 30.0%
CTTGTAACGCTTTACAATTA+CGG - chr8_2:52203814-52203833 None:intergenic 30.0%
! AATTGTAAAGCGTTACAAGT+TGG + chr8_2:52203815-52203834 Msa1254170:CDS 30.0%
CCTAATAAGAAGGCTTAATT+CGG - chr8_2:52203933-52203952 None:intergenic 30.0%
AACTAAGAACTCATCAAAGT+CGG - chr8_2:52204101-52204120 None:intergenic 30.0%
TCATTATTCATTCCACTTTC+AGG - chr8_2:52204339-52204358 None:intergenic 30.0%
GTATATATATTACGAGTGAG+TGG + chr8_2:52204399-52204418 Msa1254170:intron 30.0%
TAATTAGAATGTAGTTGCCT+TGG + chr8_2:52204759-52204778 Msa1254170:intron 30.0%
TAATTAGAATGTAGTTGCCT+TGG + chr8_2:52204759-52204778 Msa1254170:intron 30.0%
! ATTTGAAACGTGAAACGTAA+AGG + chr8_2:52205055-52205074 Msa1254170:intron 30.0%
! TTTTTATGAAACAAGAGCAG+TGG - chr8_2:52205186-52205205 None:intergenic 30.0%
! TTTACTGGTCTGTATAATAC+TGG - chr8_2:52205488-52205507 None:intergenic 30.0%
! ATCTTAGCACAATCTTTTAC+TGG - chr8_2:52205503-52205522 None:intergenic 30.0%
AATCTAATCAAAATGCTTCC+AGG + chr8_2:52205571-52205590 Msa1254170:exon 30.0%
! TTTTTGTGATAACCGGATTA+GGG + chr8_2:52205750-52205769 Msa1254170:intron 30.0%
ATAGCTTGAGTCATATTAGA+TGG + chr8_2:52205852-52205871 Msa1254170:three_prime_UTR 30.0%
CACGCTAACTCTAATTAAAT+AGG + chr8_2:52205937-52205956 Msa1254170:three_prime_UTR 30.0%
AAATATAGGATGTCACCATA+TGG - chr8_2:52205988-52206007 None:intergenic 30.0%
TTGATTGCACCTCTAAATAT+AGG - chr8_2:52206002-52206021 None:intergenic 30.0%
! TAGTAAATCGGTTCAAGAGT+TGG + chr8_2:52201987-52202006 Msa1254170:CDS 35.0%
ATCTATAATGAAGGTGGTGT+TGG + chr8_2:52202045-52202064 Msa1254170:CDS 35.0%
!!! GCGAATAATTTTGGAGCTTA+AGG - chr8_2:52202294-52202313 None:intergenic 35.0%
CACATCGAGACGTTATAAAA+TGG + chr8_2:52202775-52202794 Msa1254170:intron 35.0%
TCGAGACGTTATAAAATGGT+TGG + chr8_2:52202779-52202798 Msa1254170:intron 35.0%
TAAATGAAGAATCATGTCGG+CGG + chr8_2:52202917-52202936 Msa1254170:intron 35.0%
!! TGAAGTAATTTTAAGGGCCA+TGG + chr8_2:52202996-52203015 Msa1254170:CDS 35.0%
GATTGTTTCCTAAAGGAATG+TGG + chr8_2:52203042-52203061 Msa1254170:CDS 35.0%
CTGCAAGATAAAAAGGTAGA+AGG + chr8_2:52203174-52203193 Msa1254170:CDS 35.0%
! ACTGGTTATCTTTGAGAACT+TGG - chr8_2:52203203-52203222 None:intergenic 35.0%
AAGTTCTCAAAGATAACCAG+TGG + chr8_2:52203202-52203221 Msa1254170:CDS 35.0%
!! ACAAGAGCATCATGGATTAT+TGG - chr8_2:52203237-52203256 None:intergenic 35.0%
!! CATTAATCACAAGAGCATCA+TGG - chr8_2:52203245-52203264 None:intergenic 35.0%
GATGCTCTTGTGATTAATGT+TGG + chr8_2:52203246-52203265 Msa1254170:CDS 35.0%
!! TAATGTTGGTGATCAAATGG+AGG + chr8_2:52203260-52203279 Msa1254170:CDS 35.0%
ACAACGTGGTTGACATAATA+TGG - chr8_2:52203483-52203502 None:intergenic 35.0%
!! GTCAGTATTTTGAGCTAGAA+AGG + chr8_2:52203663-52203682 Msa1254170:intron 35.0%
!! CAGTATTTTGAGCTAGAAAG+GGG + chr8_2:52203665-52203684 Msa1254170:intron 35.0%
!! AGTATTTTGAGCTAGAAAGG+GGG + chr8_2:52203666-52203685 Msa1254170:intron 35.0%
TAGAAATCAATCGTACCTTG+AGG + chr8_2:52203698-52203717 Msa1254170:intron 35.0%
CTGTTCAAGTCTCCTTATAT+AGG + chr8_2:52203724-52203743 Msa1254170:intron 35.0%
AGCTACATACGTCAAAATAC+CGG - chr8_2:52203763-52203782 None:intergenic 35.0%
! TCCTTGATGGTTACAGATAT+CGG + chr8_2:52203785-52203804 Msa1254170:intron 35.0%
CCGAATTAAGCCTTCTTATT+AGG + chr8_2:52203930-52203949 Msa1254170:intron 35.0%
! GATTTCGAGCATATGCTTTT+GGG + chr8_2:52203958-52203977 Msa1254170:intron 35.0%
ACTAAGAACTCATCAAAGTC+GGG - chr8_2:52204100-52204119 None:intergenic 35.0%
CAAGAAACCTTGAGCATTTA+AGG + chr8_2:52204164-52204183 Msa1254170:intron 35.0%
!! GTAGTTTGCTAAGATCATTG+AGG + chr8_2:52204259-52204278 Msa1254170:intron 35.0%
ATCATTGAGGATATGTTGCT+CGG + chr8_2:52204272-52204291 Msa1254170:intron 35.0%
ATTTACCACTTTCATGCTAG+CGG - chr8_2:52204308-52204327 None:intergenic 35.0%
AAATTAGTCAAGCCTGAAAG+TGG + chr8_2:52204324-52204343 Msa1254170:intron 35.0%
AATGATCTGAGCAATCTCTT+CGG + chr8_2:52204354-52204373 Msa1254170:intron 35.0%
CAAGAGTGAGGAAAATATCA+AGG - chr8_2:52204479-52204498 None:intergenic 35.0%
! TGTGTTAAAGCGCTTAAGTT+CGG - chr8_2:52205091-52205110 None:intergenic 35.0%
! TATATAAGTGGCGGAATAAG+TGG + chr8_2:52205155-52205174 Msa1254170:intron 35.0%
TTTACCACTACTCTGTGTAT+TGG - chr8_2:52205371-52205390 None:intergenic 35.0%
AGTAGTGGTAAATGCAGAAA+GGG + chr8_2:52205379-52205398 Msa1254170:CDS 35.0%
GAATCTCTTTCTCTGAATCT+GGG - chr8_2:52205433-52205452 None:intergenic 35.0%
TGAATCTCTTTCTCTGAATC+TGG - chr8_2:52205434-52205453 None:intergenic 35.0%
TTCAGAGAAAGAGATTCAAC+CGG + chr8_2:52205436-52205455 Msa1254170:CDS 35.0%
AGTACTACCAACAAGGAAAA+AGG + chr8_2:52205531-52205550 Msa1254170:CDS 35.0%
! GGACAAGTTTTTGTGATAAC+CGG + chr8_2:52205743-52205762 Msa1254170:three_prime_UTR 35.0%
! GTTTTTGTGATAACCGGATT+AGG + chr8_2:52205749-52205768 Msa1254170:intron 35.0%
! CTTTTGTGATGATCGGATTA+GGG + chr8_2:52205803-52205822 Msa1254170:intron 35.0%
TGGTGACATCCTATATTTAG+AGG + chr8_2:52205990-52206009 Msa1254170:three_prime_UTR 35.0%
AATGCAGATGCTCATCTATG+TGG - chr8_2:52201841-52201860 None:intergenic 40.0%
CATTCAAACGTGCAACATAC+TGG + chr8_2:52201857-52201876 Msa1254170:five_prime_UTR 40.0%
AGGTTGGCAATGTCAATGAT+TGG - chr8_2:52202114-52202133 None:intergenic 40.0%
AGCTCATGTTGTGAAGTAGA+TGG - chr8_2:52202144-52202163 None:intergenic 40.0%
TCATTCTTGTGGCTTCTTTC+TGG + chr8_2:52202185-52202204 Msa1254170:CDS 40.0%
ATGGTTTATCACCTGAACAG+CGG - chr8_2:52202326-52202345 None:intergenic 40.0%
CTGTTCAGGTGATAAACCAT+GGG + chr8_2:52202326-52202345 Msa1254170:intron 40.0%
CTCGTTTCTTGACAAAGTGA+GGG + chr8_2:52202357-52202376 Msa1254170:CDS 40.0%
AGGTACATCCTCAAGATCAA+AGG + chr8_2:52202521-52202540 Msa1254170:CDS 40.0%
! CTGAAATCAATGGGGTTTTG+GGG - chr8_2:52202562-52202581 None:intergenic 40.0%
! CCTGAAATCAATGGGGTTTT+GGG - chr8_2:52202563-52202582 None:intergenic 40.0%
! ACCTGAAATCAATGGGGTTT+TGG - chr8_2:52202564-52202583 None:intergenic 40.0%
!! AGCTTAGCCTTGTAACTGTA+AGG + chr8_2:52202738-52202757 Msa1254170:intron 40.0%
GGAAGAGGATTGTTTCCTAA+AGG + chr8_2:52203035-52203054 Msa1254170:CDS 40.0%
ATGAATCAGAATGTGGCTTC+AGG - chr8_2:52203137-52203156 None:intergenic 40.0%
! GGTTATCTTTGAGAACTTGG+AGG - chr8_2:52203200-52203219 None:intergenic 40.0%
TCAAGTCTCCTTATATAGGG+AGG + chr8_2:52203728-52203747 Msa1254170:intron 40.0%
CGTATGTAGCTATTCCTTGA+TGG + chr8_2:52203772-52203791 Msa1254170:intron 40.0%
! CCTTGATGGTTACAGATATC+GGG + chr8_2:52203786-52203805 Msa1254170:intron 40.0%
! TTACAAGTTGGCAATGATGG+AGG + chr8_2:52203827-52203846 Msa1254170:CDS 40.0%
AAGAAGGCTTAATTCGGCAT+TGG - chr8_2:52203927-52203946 None:intergenic 40.0%
TAAGCCTTCTTATTAGGCCT+CGG + chr8_2:52203936-52203955 Msa1254170:intron 40.0%
AAATCCGAGGCCTAATAAGA+AGG - chr8_2:52203943-52203962 None:intergenic 40.0%
! GGATTTCGAGCATATGCTTT+TGG + chr8_2:52203957-52203976 Msa1254170:intron 40.0%
TGATGAGTTCTTAGTTCGCA+AGG + chr8_2:52204105-52204124 Msa1254170:intron 40.0%
TTTACCACTTTCATGCTAGC+GGG - chr8_2:52204307-52204326 None:intergenic 40.0%
! TTTTCCTCACTCTTGCTTAG+TGG + chr8_2:52204484-52204503 Msa1254170:intron 40.0%
TTAGAATGTAGTTGCCTTGG+TGG + chr8_2:52204762-52204781 Msa1254170:intron 40.0%
TTAGAATGTAGTTGCCTTGG+TGG + chr8_2:52204762-52204781 Msa1254170:intron 40.0%
TTATGAAACAAGAGCAGTGG+CGG - chr8_2:52205183-52205202 None:intergenic 40.0%
GAGTAGTGGTAAATGCAGAA+AGG + chr8_2:52205378-52205397 Msa1254170:CDS 40.0%
TGGTAAATGCAGAAAGGGAA+AGG + chr8_2:52205384-52205403 Msa1254170:CDS 40.0%
! TCGTTCACTAGTTTGTCAAC+CGG - chr8_2:52205458-52205477 None:intergenic 40.0%
ACAAACTAGTGAACGAGTCA+AGG + chr8_2:52205462-52205481 Msa1254170:CDS 40.0%
TTTCTCGAGTACTACCAACA+AGG + chr8_2:52205524-52205543 Msa1254170:CDS 40.0%
!!! CAATTGGCCTTTTTCCTTGT+TGG - chr8_2:52205541-52205560 None:intergenic 40.0%
!! AAGAATTTGGTGCTTGCAAG+AGG + chr8_2:52205663-52205682 Msa1254170:three_prime_UTR 40.0%
! GCTTTTGTGATGATCGGATT+AGG + chr8_2:52205802-52205821 Msa1254170:intron 40.0%
TGCTCATCTATGTGGTCCAT+TGG - chr8_2:52201833-52201852 None:intergenic 45.0%
!! AAAAATGGAAGTGTCGGCAG+AGG + chr8_2:52201951-52201970 Msa1254170:exon 45.0%
AGTAGATGGAGAAGTGAGGT+TGG - chr8_2:52202130-52202149 None:intergenic 45.0%
GTGAAGTAGATGGAGAAGTG+AGG - chr8_2:52202134-52202153 None:intergenic 45.0%
CACAAGAATGAAGTGCAGCT+TGG - chr8_2:52202176-52202195 None:intergenic 45.0%
CAAGCTGCACTTCATTCTTG+TGG + chr8_2:52202174-52202193 Msa1254170:CDS 45.0%
GCTGTTCAGGTGATAAACCA+TGG + chr8_2:52202325-52202344 Msa1254170:intron 45.0%
GCTCGTTTCTTGACAAAGTG+AGG + chr8_2:52202356-52202375 Msa1254170:CDS 45.0%
!! CCCAAAACCCCATTGATTTC+AGG + chr8_2:52202560-52202579 Msa1254170:CDS 45.0%
GAAGACACTGAACTTGGAAG+AGG + chr8_2:52203020-52203039 Msa1254170:CDS 45.0%
CTCTCTCTCCACATTCCTTT+AGG - chr8_2:52203053-52203072 None:intergenic 45.0%
CTAAAGGAATGTGGAGAGAG+AGG + chr8_2:52203051-52203070 Msa1254170:CDS 45.0%
AGGACATGGAGGGTAGTAAT+TGG - chr8_2:52203094-52203113 None:intergenic 45.0%
TTACTACCCTCCATGTCCTA+TGG + chr8_2:52203095-52203114 Msa1254170:CDS 45.0%
!! GTTGGTGATCAAATGGAGGT+AGG + chr8_2:52203264-52203283 Msa1254170:intron 45.0%
GCATGTTGTTCTTGAGTGCT+TGG + chr8_2:52203598-52203617 Msa1254170:intron 45.0%
TTGAGTGCTTGGAACAAGCA+GGG + chr8_2:52203609-52203628 Msa1254170:intron 45.0%
AGACTTGAACAGTCTCCTCA+AGG - chr8_2:52203716-52203735 None:intergenic 45.0%
AACCTGCACCTCCCTATATA+AGG - chr8_2:52203739-52203758 None:intergenic 45.0%
CCCGATATCTGTAACCATCA+AGG - chr8_2:52203789-52203808 None:intergenic 45.0%
! GCGTTACAAGTTGGCAATGA+TGG + chr8_2:52203824-52203843 Msa1254170:CDS 45.0%
AAGCATATGCTCGAAATCCG+AGG - chr8_2:52203956-52203975 None:intergenic 45.0%
TAGTCCAAGAATGACGACCT+GGG - chr8_2:52204002-52204021 None:intergenic 45.0%
TTAGTCCAAGAATGACGACC+TGG - chr8_2:52204003-52204022 None:intergenic 45.0%
TAGGGAAAAGGTCATGCTTG+CGG + chr8_2:52204058-52204077 Msa1254170:intron 45.0%
CACGCATCCTTAAATGCTCA+AGG - chr8_2:52204174-52204193 None:intergenic 45.0%
ATATCCCGCTAGCATGAAAG+TGG + chr8_2:52204300-52204319 Msa1254170:intron 45.0%
ATCTGAGCAATCTCTTCGGA+AGG + chr8_2:52204358-52204377 Msa1254170:intron 45.0%
CCACAAGAAACTCCTATCCT+CGG - chr8_2:52204425-52204444 None:intergenic 45.0%
CGAGGATAGGAGTTTCTTGT+GGG + chr8_2:52204423-52204442 Msa1254170:intron 45.0%
GAGTCCAATACACAGAGTAG+TGG + chr8_2:52205364-52205383 Msa1254170:CDS 45.0%
TCTCTTTCTCTGAATCTGGG+CGG - chr8_2:52205430-52205449 None:intergenic 45.0%
CTTTCATCTCACAGACTTCC+TGG - chr8_2:52205592-52205611 None:intergenic 45.0%
GTGAAAGCGAAACCCTAATC+CGG - chr8_2:52205765-52205784 None:intergenic 45.0%
TCGGCAGAGGTTGAGATAGT+TGG + chr8_2:52201964-52201983 Msa1254170:CDS 50.0%
! GCAACTGTTTTCCGCTGTTC+AGG + chr8_2:52202312-52202331 Msa1254170:intron 50.0%
GAAACGAGCTTGTCATCCCA+TGG - chr8_2:52202345-52202364 None:intergenic 50.0%
CAAGTTCAGTGTCTTCGCCA+TGG - chr8_2:52203016-52203035 None:intergenic 50.0%
CATGGCGAAGACACTGAACT+TGG + chr8_2:52203014-52203033 Msa1254170:CDS 50.0%
GATCAGCCATAGGACATGGA+GGG - chr8_2:52203104-52203123 None:intergenic 50.0%
TGATCAGCCATAGGACATGG+AGG - chr8_2:52203105-52203124 None:intergenic 50.0%
GCATGATCAGCCATAGGACA+TGG - chr8_2:52203108-52203127 None:intergenic 50.0%
TCCTATGGCTGATCATGCTC+TGG + chr8_2:52203110-52203129 Msa1254170:CDS 50.0%
CCTATGGCTGATCATGCTCT+GGG + chr8_2:52203111-52203130 Msa1254170:CDS 50.0%
CTTGAGTGCTTGGAACAAGC+AGG + chr8_2:52203608-52203627 Msa1254170:intron 50.0%
TGAGTGCTTGGAACAAGCAG+GGG + chr8_2:52203610-52203629 Msa1254170:intron 50.0%
TGAGCTAGAAAGGGGGCTTA+AGG + chr8_2:52203673-52203692 Msa1254170:intron 50.0%
GAGCTAGAAAGGGGGCTTAA+GGG + chr8_2:52203674-52203693 Msa1254170:intron 50.0%
! CTCCTTATATAGGGAGGTGC+AGG + chr8_2:52203734-52203753 Msa1254170:intron 50.0%
GACACATAACCCCTCTCCAT+GGG - chr8_2:52203905-52203924 None:intergenic 50.0%
AGTCCAAGAATGACGACCTG+GGG - chr8_2:52204001-52204020 None:intergenic 50.0%
AGGGAAAAGGTCATGCTTGC+GGG + chr8_2:52204059-52204078 Msa1254170:intron 50.0%
TGAGGATATGTTGCTCGGAG+AGG + chr8_2:52204277-52204296 Msa1254170:intron 50.0%
ATATTACGAGTGAGTGGCCG+AGG + chr8_2:52204405-52204424 Msa1254170:intron 50.0%
CCGAGGATAGGAGTTTCTTG+TGG + chr8_2:52204422-52204441 Msa1254170:intron 50.0%
GAAGCTCAGACATTCCGACT+AGG - chr8_2:52204455-52204474 None:intergenic 50.0%
TCTGCCACTAAGCAAGAGTG+AGG - chr8_2:52204491-52204510 None:intergenic 50.0%
CAACTAGCATACGACCACCA+AGG - chr8_2:52204779-52204798 None:intergenic 50.0%
AGTTGTGTCCAAGCTTGCGT+CGG + chr8_2:52204794-52204813 Msa1254170:intron 50.0%
CAACTAGCATACGACCACCA+AGG - chr8_2:52204779-52204798 None:intergenic 50.0%
AGTTGTGTCCAAGCTTGCGT+CGG + chr8_2:52204794-52204813 Msa1254170:intron 50.0%
AGCATGTCACCTACCCTACT+TGG + chr8_2:52206031-52206050 Msa1254170:three_prime_UTR 50.0%
GTCGGCGGATATGTCAATGC+AGG + chr8_2:52202932-52202951 Msa1254170:intron 55.0%
CCCAGAGCATGATCAGCCAT+AGG - chr8_2:52203114-52203133 None:intergenic 55.0%
! TATAGGGAGGTGCAGGTTGC+CGG + chr8_2:52203741-52203760 Msa1254170:intron 55.0%
TGGGTGCTCGCAGCAATTTG+GGG - chr8_2:52203882-52203901 None:intergenic 55.0%
GTGGGTGCTCGCAGCAATTT+GGG - chr8_2:52203883-52203902 None:intergenic 55.0%
CATAACCCCTCTCCATGGGT+GGG - chr8_2:52203901-52203920 None:intergenic 55.0%
ACATAACCCCTCTCCATGGG+TGG - chr8_2:52203902-52203921 None:intergenic 55.0%
GGACACATAACCCCTCTCCA+TGG - chr8_2:52203906-52203925 None:intergenic 55.0%
AGTCAAGAACAGTTGCCCCC+AGG + chr8_2:52203982-52204001 Msa1254170:intron 55.0%
GTCCAAGAATGACGACCTGG+GGG - chr8_2:52204000-52204019 None:intergenic 55.0%
CTTGTGGGCTTCGACCTAGT+CGG + chr8_2:52204438-52204457 Msa1254170:intron 55.0%
GTTGTGTCCAAGCTTGCGTC+GGG + chr8_2:52204795-52204814 Msa1254170:intron 55.0%
GTTGTGTCCAAGCTTGCGTC+GGG + chr8_2:52204795-52204814 Msa1254170:intron 55.0%
GGTGGGTGCTCGCAGCAATT+TGG - chr8_2:52203884-52203903 None:intergenic 60.0%
TGCCCCCAGGTCGTCATTCT+TGG + chr8_2:52203995-52204014 Msa1254170:intron 60.0%
ACGAGTGAGTGGCCGAGGAT+AGG + chr8_2:52204410-52204429 Msa1254170:intron 60.0%
GGTTAGACCCGACGCAAGCT+TGG - chr8_2:52204805-52204824 None:intergenic 60.0%
GGTTAGACCCGACGCAAGCT+TGG - chr8_2:52204805-52204824 None:intergenic 60.0%
TTGCTGCGAGCACCCACCCA+TGG + chr8_2:52203886-52203905 Msa1254170:CDS 65.0%
CGAGCACCCACCCATGGAGA+GGG + chr8_2:52203892-52203911 Msa1254170:CDS 65.0%
GAGCACCCACCCATGGAGAG+GGG + chr8_2:52203893-52203912 Msa1254170:CDS 65.0%
GCGAGCACCCACCCATGGAG+AGG + chr8_2:52203891-52203910 Msa1254170:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 52201811 52206054 52201811 ID=Msa1254170;Name=Msa1254170
chr8_2 mRNA 52201811 52206054 52201811 ID=Msa1254170-mRNA-1;Parent=Msa1254170;Name=Msa1254170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=144|0.6|0.83|0.83|0.8|0.66|6|420|392
chr8_2 exon 52201811 52202206 52201811 ID=Msa1254170-mRNA-1:exon:15972;Parent=Msa1254170-mRNA-1
chr8_2 exon 52202334 52202581 52202334 ID=Msa1254170-mRNA-1:exon:15973;Parent=Msa1254170-mRNA-1
chr8_2 exon 52202954 52203281 52202954 ID=Msa1254170-mRNA-1:exon:15974;Parent=Msa1254170-mRNA-1
chr8_2 exon 52203801 52203914 52203801 ID=Msa1254170-mRNA-1:exon:15975;Parent=Msa1254170-mRNA-1
chr8_2 exon 52205341 52205766 52205341 ID=Msa1254170-mRNA-1:exon:15976;Parent=Msa1254170-mRNA-1
chr8_2 exon 52205824 52206054 52205824 ID=Msa1254170-mRNA-1:exon:15977;Parent=Msa1254170-mRNA-1
chr8_2 five_prime_UTR 52201811 52201954 52201811 ID=Msa1254170-mRNA-1:five_prime_utr;Parent=Msa1254170-mRNA-1
chr8_2 CDS 52201955 52202206 52201955 ID=Msa1254170-mRNA-1:cds;Parent=Msa1254170-mRNA-1
chr8_2 CDS 52202334 52202581 52202334 ID=Msa1254170-mRNA-1:cds;Parent=Msa1254170-mRNA-1
chr8_2 CDS 52202954 52203281 52202954 ID=Msa1254170-mRNA-1:cds;Parent=Msa1254170-mRNA-1
chr8_2 CDS 52203801 52203914 52203801 ID=Msa1254170-mRNA-1:cds;Parent=Msa1254170-mRNA-1
chr8_2 CDS 52205341 52205577 52205341 ID=Msa1254170-mRNA-1:cds;Parent=Msa1254170-mRNA-1
chr8_2 three_prime_UTR 52205578 52205766 52205578 ID=Msa1254170-mRNA-1:three_prime_utr;Parent=Msa1254170-mRNA-1
chr8_2 three_prime_UTR 52205824 52206054 52205824 ID=Msa1254170-mRNA-1:three_prime_utr;Parent=Msa1254170-mRNA-1
Gene Sequence

>Msa1254170

ATGGAAGTGTCGGCAGAGGTTGAGATAGTTGGTAGTAAATCGGTTCAAGAGTTGGCATTGAATTCTGAAAATCTTCCACCAAATAATTATATCTATAATGAAGGTGGTGTTGGATTTCGTGATGCTCTTCTTCCTTCAGAATCAGATTTTCATGTTCCAATCATTGACATTGCCAACCTCACTTCTCCATCTACTTCACAACATGAGCTTCTTAAACTCCAAGCTGCACTTCATTCTTGTGGCTTCTTTCTGGTGATAAACCATGGGATGACAAGCTCGTTTCTTGACAAAGTGAGGGAAGTTTCAAAGCAATTTTTTGAACTTCCAAAGGAAGAAAAGCAAAAATATGCAAGGGAACAAAACAATATTGAAGGATATGGAAATGATACAATATATTCAGAAAATCAAATGCTTGATTGGTGTGACAGAATATTTTTGAAGGTACATCCTCAAGATCAAAGGAATTTCAAACTTTGGCCCCAAAACCCCATTGATTTCAGGAATACTATACAACAATATACCGAATGTATCTGGCAGTTATATGAAGTAATTTTAAGGGCCATGGCGAAGACACTGAACTTGGAAGAGGATTGTTTCCTAAAGGAATGTGGAGAGAGAGGTACAATGTCTATGAGAACCAATTACTACCCTCCATGTCCTATGGCTGATCATGCTCTGGGCCTGAAGCCACATTCTGATTCATCATCTATAACTTTTTTGCTGCAAGATAAAAAGGTAGAAGGCCTCCAAGTTCTCAAAGATAACCAGTGGTTTAAAGTTCCAATAATCCATGATGCTCTTGTGATTAATGTTGGTGATCAAATGGAGATATCGGGATCCGTAATTGTAAAGCGTTACAAGTTGGCAATGATGGAGGCAGTTACGAATCATTGTTTTGAATCGTTGCCCCAAATTGCTGCGAGCACCCACCCATGGAGAGGGATAATGAGCAATGGGATTTTTCAGAGTCCAATACACAGAGTAGTGGTAAATGCAGAAAGGGAAAGGCTCTCAGTAGCTATGTTTTGCCGCCCAGATTCAGAGAAAGAGATTCAACCGGTTGACAAACTAGTGAACGAGTCAAGGCCAGTATTATACAGACCAGTAAAAGATTGTGCTAAGATATTTCTCGAGTACTACCAACAAGGAAAAAGGCCAATTGATGCTTTCAAAATCTAA

Protein sequence

>Msa1254170

MEVSAEVEIVGSKSVQELALNSENLPPNNYIYNEGGVGFRDALLPSESDFHVPIIDIANLTSPSTSQHELLKLQAALHSCGFFLVINHGMTSSFLDKVREVSKQFFELPKEEKQKYAREQNNIEGYGNDTIYSENQMLDWCDRIFLKVHPQDQRNFKLWPQNPIDFRNTIQQYTECIWQLYEVILRAMAKTLNLEEDCFLKECGERGTMSMRTNYYPPCPMADHALGLKPHSDSSSITFLLQDKKVEGLQVLKDNQWFKVPIIHDALVINVGDQMEISGSVIVKRYKLAMMEAVTNHCFESLPQIAASTHPWRGIMSNGIFQSPIHRVVVNAERERLSVAMFCRPDSEKEIQPVDKLVNESRPVLYRPVKDCAKIFLEYYQQGKRPIDAFKI*