Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288680 | XP_003594803.1 | 91.547 | 698 | 22 | 1 | 1 | 661 | 198 | 895 | 0.0 | 1269 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288680 | G7IMV9 | 91.547 | 698 | 22 | 1 | 1 | 661 | 198 | 895 | 0.0 | 1269 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa0288680 | 0.832256 | 1.048394e-55 | -8.615850e-47 |
| Msa0028420 | Msa0288680 | 0.800850 | 1.187921e-48 | -8.615850e-47 |
| Msa0028640 | Msa0288680 | 0.803886 | 2.814522e-49 | -8.615850e-47 |
| Msa0074240 | Msa0288680 | 0.805447 | 1.329302e-49 | -8.615850e-47 |
| Msa0089630 | Msa0288680 | 0.816477 | 5.419519e-52 | -8.615850e-47 |
| Msa0094120 | Msa0288680 | 0.801335 | 9.452742e-49 | -8.615850e-47 |
| Msa0124060 | Msa0288680 | 0.800301 | 1.537152e-48 | -8.615850e-47 |
| Msa0124280 | Msa0288680 | 0.818809 | 1.614522e-52 | -8.615850e-47 |
| Msa0126370 | Msa0288680 | 0.800856 | 1.184380e-48 | -8.615850e-47 |
| Msa0137450 | Msa0288680 | 0.800147 | 1.651420e-48 | -8.615850e-47 |
| Msa0157290 | Msa0288680 | 0.832138 | 1.121713e-55 | -8.615850e-47 |
| Msa0163980 | Msa0288680 | 0.818893 | 1.545543e-52 | -8.615850e-47 |
| Msa0168500 | Msa0288680 | 0.807303 | 5.399907e-50 | -8.615850e-47 |
| Msa0200260 | Msa0288680 | 0.805189 | 1.505011e-49 | -8.615850e-47 |
| Msa0225740 | Msa0288680 | 0.804835 | 1.784995e-49 | -8.615850e-47 |
| Msa0243100 | Msa0288680 | 0.804398 | 2.202135e-49 | -8.615850e-47 |
| Msa0255090 | Msa0288680 | 0.804386 | 2.214991e-49 | -8.615850e-47 |
| Msa0259380 | Msa0288680 | 0.808823 | 2.563185e-50 | -8.615850e-47 |
| Msa0261340 | Msa0288680 | 0.817083 | 3.962904e-52 | -8.615850e-47 |
| Msa0277180 | Msa0288680 | 0.810240 | 1.271538e-50 | -8.615850e-47 |
| Msa0287650 | Msa0288680 | 0.800565 | 1.358051e-48 | -8.615850e-47 |
| Msa0288680 | Msa0292400 | 0.817877 | 2.625170e-52 | -8.615850e-47 |
| Msa0288680 | Msa0337540 | 0.804758 | 1.852680e-49 | -8.615850e-47 |
| Msa0288680 | Msa0403970 | 0.806321 | 8.705203e-50 | -8.615850e-47 |
| Msa0288680 | Msa0410650 | 0.806852 | 6.725649e-50 | -8.615850e-47 |
| Msa0288680 | Msa0417880 | 0.803661 | 3.133383e-49 | -8.615850e-47 |
| Msa0288680 | Msa0422930 | 0.801541 | 8.576488e-49 | -8.615850e-47 |
| Msa0288680 | Msa0475790 | 0.834466 | 2.949063e-56 | -8.615850e-47 |
| Msa0288680 | Msa0481530 | 0.816488 | 5.390380e-52 | -8.615850e-47 |
| Msa0288680 | Msa0507680 | 0.803224 | 3.860875e-49 | -8.615850e-47 |
| Msa0288680 | Msa0523270 | 0.819859 | 9.309448e-53 | -8.615850e-47 |
| Msa0288680 | Msa0524190 | 0.800250 | 1.573683e-48 | -8.615850e-47 |
| Msa0288680 | Msa0529890 | 0.824875 | 6.367080e-54 | -8.615850e-47 |
| Msa0288680 | Msa0557070 | 0.800104 | 1.685332e-48 | -8.615850e-47 |
| Msa0288680 | Msa0569200 | 0.816534 | 5.263842e-52 | -8.615850e-47 |
| Msa0288680 | Msa0574890 | 0.803488 | 3.404448e-49 | -8.615850e-47 |
| Msa0288680 | Msa0585560 | 0.825393 | 4.804458e-54 | -8.615850e-47 |
| Msa0288680 | Msa0601750 | 0.810094 | 1.367615e-50 | -8.615850e-47 |
| Msa0288680 | Msa0625720 | 0.824056 | 9.924135e-54 | -8.615850e-47 |
| Msa0288680 | Msa0643080 | 0.804426 | 2.172296e-49 | -8.615850e-47 |
| Msa0288680 | Msa0647980 | 0.800624 | 1.320648e-48 | -8.615850e-47 |
| Msa0288680 | Msa0662500 | 0.807561 | 4.759611e-50 | -8.615850e-47 |
| Msa0288680 | Msa0663390 | 0.823177 | 1.593610e-53 | -8.615850e-47 |
| Msa0288680 | Msa0684500 | 0.802110 | 6.554994e-49 | -8.615850e-47 |
| Msa0288680 | Msa0727710 | 0.804554 | 2.043109e-49 | -8.615850e-47 |
| Msa0288680 | Msa0741240 | 0.801145 | 1.033939e-48 | -8.615850e-47 |
| Msa0288680 | Msa0754520 | 0.818949 | 1.500670e-52 | -8.615850e-47 |
| Msa0288680 | Msa0765240 | 0.811513 | 6.741959e-51 | -8.615850e-47 |
| Msa0288680 | Msa0822870 | 0.800104 | 1.685266e-48 | -8.615850e-47 |
| Msa0288680 | Msa0828560 | 0.815732 | 7.951613e-52 | -8.615850e-47 |
| Msa0288680 | Msa0833220 | 0.823211 | 1.564824e-53 | -8.615850e-47 |
| Msa0288680 | Msa0861870 | 0.811348 | 7.321723e-51 | -8.615850e-47 |
| Msa0288680 | Msa0866520 | 0.818143 | 2.285936e-52 | -8.615850e-47 |
| Msa0288680 | Msa0869780 | 0.810034 | 1.408696e-50 | -8.615850e-47 |
| Msa0288680 | Msa0871270 | 0.806797 | 6.907716e-50 | -8.615850e-47 |
| Msa0288680 | Msa0880140 | 0.826721 | 2.322574e-54 | -8.615850e-47 |
| Msa0288680 | Msa0941190 | 0.800373 | 1.485915e-48 | -8.615850e-47 |
| Msa0288680 | Msa0944030 | 0.803093 | 4.108570e-49 | -8.615850e-47 |
| Msa0288680 | Msa0945110 | 0.814992 | 1.161281e-51 | -8.615850e-47 |
| Msa0288680 | Msa1013400 | 0.802807 | 4.707669e-49 | -8.615850e-47 |
| Msa0288680 | Msa1019430 | 0.814511 | 1.484221e-51 | -8.615850e-47 |
| Msa0288680 | Msa1019470 | 0.812610 | 3.888014e-51 | -8.615850e-47 |
| Msa0288680 | Msa1085200 | 0.803731 | 3.031434e-49 | -8.615850e-47 |
| Msa0288680 | Msa1100050 | 0.807515 | 4.867732e-50 | -8.615850e-47 |
| Msa0288680 | Msa1103990 | 0.813051 | 3.112994e-51 | -8.615850e-47 |
| Msa0288680 | Msa1124110 | 0.806200 | 9.231593e-50 | -8.615850e-47 |
| Msa0288680 | Msa1172450 | 0.812129 | 4.951043e-51 | -8.615850e-47 |
| Msa0288680 | Msa1193290 | 0.813528 | 2.445402e-51 | -8.615850e-47 |
| Msa0288680 | Msa1209460 | 0.806748 | 7.074989e-50 | -8.615850e-47 |
| Msa0288680 | Msa1222850 | 0.825156 | 5.465947e-54 | -8.615850e-47 |
| Msa0288680 | Msa1269480 | 0.810615 | 1.055429e-50 | -8.615850e-47 |
| Msa0288680 | Msa1302830 | 0.807859 | 4.113559e-50 | -8.615850e-47 |
| Msa0288680 | Msa1327680 | 0.800871 | 1.176067e-48 | -8.615850e-47 |
| Msa0288680 | Msa1330410 | 0.809655 | 1.699914e-50 | -8.615850e-47 |
| Msa0288680 | Msa1346370 | 0.824385 | 8.306394e-54 | -8.615850e-47 |
| Msa0288680 | Msa1367370 | 0.805277 | 1.442667e-49 | -8.615850e-47 |
| Msa0288680 | Msa1374550 | 0.806979 | 6.323916e-50 | -8.615850e-47 |
| Msa0288680 | Msa1443110 | 0.812398 | 4.325832e-51 | -8.615850e-47 |
| Msa0288680 | Msa1451160 | 0.806807 | 6.874845e-50 | -8.615850e-47 |
| Msa0288680 | Msa1461300 | 0.812720 | 3.677534e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288680 | MtrunA17_Chr2g0294831 | 91.547 | 698 | 22 | 1 | 1 | 661 | 198 | 895 | 0.0 | 1269 |
| Msa0288680 | MtrunA17_Chr7g0271711 | 27.510 | 727 | 418 | 24 | 1 | 664 | 205 | 885 | 7.36e-51 | 191 |
| Msa0288680 | MtrunA17_Chr1g0192581 | 28.237 | 641 | 367 | 25 | 46 | 662 | 159 | 730 | 3.75e-45 | 173 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0288680 | AT3G58650.1 | 28.012 | 689 | 358 | 23 | 1 | 660 | 204 | 783 | 1.09e-46 | 178 |
| Msa0288680 | AT5G26910.4 | 27.096 | 668 | 405 | 21 | 1 | 660 | 206 | 799 | 1.35e-44 | 172 |
| Msa0288680 | AT5G26910.1 | 27.096 | 668 | 405 | 21 | 1 | 660 | 206 | 799 | 1.35e-44 | 172 |
| Msa0288680 | AT5G26910.3 | 27.096 | 668 | 405 | 21 | 1 | 660 | 205 | 798 | 1.42e-44 | 172 |
| Msa0288680 | AT3G05750.3 | 40.458 | 131 | 72 | 2 | 530 | 659 | 542 | 667 | 8.54e-23 | 104 |
| Msa0288680 | AT3G05750.2 | 40.458 | 131 | 72 | 2 | 530 | 659 | 542 | 667 | 8.54e-23 | 104 |
| Msa0288680 | AT3G05750.4 | 40.458 | 131 | 72 | 2 | 530 | 659 | 637 | 762 | 8.67e-23 | 104 |
| Msa0288680 | AT3G05750.1 | 40.458 | 131 | 72 | 2 | 530 | 659 | 645 | 770 | 1.15e-22 | 103 |
| Msa0288680 | AT5G26910.2 | 25.936 | 374 | 240 | 11 | 1 | 371 | 206 | 545 | 7.05e-15 | 79.0 |
Find 136 sgRNAs with CRISPR-Local
Find 401 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTTGTACAAGGAAATTT+TGG | 0.116655 | 2_3:-34248272 | Msa0288680:CDS |
| CCCTCAACTTCTGTTCTAAA+AGG | 0.206450 | 2_3:+34249464 | None:intergenic |
| GATTCTTCTTTGAATAATAA+AGG | 0.253439 | 2_3:-34250253 | Msa0288680:CDS |
| GGATTGCTGCTCCTTGTTAA+TGG | 0.259788 | 2_3:+34249628 | None:intergenic |
| AGAAAATAAATGGAATAAAA+TGG | 0.264525 | 2_3:+34243553 | None:intergenic |
| CAATGTTGAGTTAATGTATA+TGG | 0.277411 | 2_3:-34248524 | Msa0288680:CDS |
| TTATGTTTCAATGATGATTC+TGG | 0.299384 | 2_3:+34249232 | None:intergenic |
| CCAATTACATTGTATCCTAT+TGG | 0.308077 | 2_3:+34249505 | None:intergenic |
| CCAATAGGATACAATGTAAT+TGG | 0.322719 | 2_3:-34249505 | Msa0288680:CDS |
| GAATGCTGTGAAGTGTTTAA+AGG | 0.326466 | 2_3:-34250347 | Msa0288680:CDS |
| AATCCAACCACTTTCCATAT+TGG | 0.332576 | 2_3:+34248191 | None:intergenic |
| TGAGAACATTAGAAGAATTC+TGG | 0.343239 | 2_3:+34250061 | None:intergenic |
| GAAAGGGATGAGAGATTCTA+TGG | 0.351986 | 2_3:-34248245 | Msa0288680:CDS |
| AAATCAAGATATGTCGTTTA+CGG | 0.359716 | 2_3:-34249305 | Msa0288680:CDS |
| ACGACTGGAGATTCCTCTTA+TGG | 0.366120 | 2_3:-34249943 | Msa0288680:CDS |
| CAATGATGATTCTGGAAGAT+TGG | 0.372954 | 2_3:+34249240 | None:intergenic |
| AAGGATATGAGTAGCCAATA+TGG | 0.377746 | 2_3:-34248205 | Msa0288680:CDS |
| AGCAAAGGCTAAAGCGCATT+TGG | 0.386167 | 2_3:-34250551 | Msa0288680:CDS |
| AATTTGCATAGGAAATCTTC+TGG | 0.387773 | 2_3:-34250084 | Msa0288680:CDS |
| AATGCGCTTTAGCCTTTGCT+TGG | 0.391802 | 2_3:+34250554 | None:intergenic |
| GCATGACTTACCTTCTATAC+TGG | 0.397355 | 2_3:+34248844 | None:intergenic |
| CCTCACTTTAGAAACATCAT+TGG | 0.413027 | 2_3:+34249414 | None:intergenic |
| ATTCTTCTTTGAATAATAAA+GGG | 0.413579 | 2_3:-34250252 | Msa0288680:CDS |
| TGTCATTATTATCAATTGAA+TGG | 0.417904 | 2_3:+34250016 | None:intergenic |
| TTGGAAACCAATGGCTTAGA+TGG | 0.421919 | 2_3:+34249985 | None:intergenic |
| TACAGTGAATGCTTCCTCTT+AGG | 0.423573 | 2_3:+34243593 | None:intergenic |
| GGATACAAAATGTGGACAAA+AGG | 0.432659 | 2_3:-34248331 | Msa0288680:CDS |
| CATCATTGAAACATAAATCA+TGG | 0.434027 | 2_3:-34249225 | Msa0288680:CDS |
| GCTTCTATGCCGTCCATAAG+AGG | 0.439709 | 2_3:+34249930 | None:intergenic |
| GTAGCGAGTAATAAACAATA+TGG | 0.440742 | 2_3:-34249709 | Msa0288680:CDS |
| TCTAGGAAAATTATTTGTCC+TGG | 0.441310 | 2_3:+34249819 | None:intergenic |
| TTCAATGTCTCTATTTGTAC+AGG | 0.441826 | 2_3:-34246777 | Msa0288680:CDS |
| CTCGCTACATTTGACTTCAC+TGG | 0.443274 | 2_3:+34249724 | None:intergenic |
| GACAATCTTTGAACAAAAGC+TGG | 0.447236 | 2_3:-34250324 | Msa0288680:CDS |
| CCACAAGAATTCTTGAACCT+GGG | 0.449508 | 2_3:-34250582 | Msa0288680:CDS |
| ACTGAAGATGTCGCAATAAG+AGG | 0.450581 | 2_3:+34250463 | None:intergenic |
| AGAATTCTTCTAATGTTCTC+AGG | 0.451320 | 2_3:-34250059 | Msa0288680:CDS |
| GCGGATGTTACCAGTATAGA+AGG | 0.452541 | 2_3:-34248854 | Msa0288680:intron |
| CGCTTTAGCCTTTGCTTGGG+AGG | 0.453823 | 2_3:+34250558 | None:intergenic |
| GGTTGATGAGCTTGTGGATA+AGG | 0.457275 | 2_3:-34248224 | Msa0288680:CDS |
| TTCGCTATCGGTTACCTCCA+CGG | 0.460523 | 2_3:+34249858 | None:intergenic |
| AATGCTGTGAAGTGTTTAAA+GGG | 0.464962 | 2_3:-34250346 | Msa0288680:CDS |
| GAAGACTCAAGAACTGAGAC+TGG | 0.469646 | 2_3:+34248911 | None:intergenic |
| GACAATACAAGGTCTCCAAT+AGG | 0.471049 | 2_3:-34249520 | Msa0288680:CDS |
| ATGCGCTTTAGCCTTTGCTT+GGG | 0.471863 | 2_3:+34250555 | None:intergenic |
| TTGAGATGTAGAAGTTATGT+TGG | 0.471928 | 2_3:-34248358 | Msa0288680:CDS |
| TGTCGAGGTGTCACAGAACC+TGG | 0.473644 | 2_3:+34249607 | None:intergenic |
| TGGAAAGTGGTTGGATTATG+AGG | 0.473906 | 2_3:-34248185 | Msa0288680:intron |
| AATATAGTTAGCCTCAATCT+AGG | 0.474353 | 2_3:-34249343 | Msa0288680:CDS |
| CTCTCATCTCTTCAACCAGT+TGG | 0.479535 | 2_3:-34248467 | Msa0288680:CDS |
| TGTAATTGGTGGTGATGCCT+TGG | 0.484412 | 2_3:-34249491 | Msa0288680:CDS |
| CATCATCGACGGTCTCACTA+AGG | 0.485114 | 2_3:-34250528 | Msa0288680:CDS |
| GCACATTGTCATTATGTCAA+TGG | 0.485839 | 2_3:-34243621 | Msa0288680:CDS |
| GCCACAAGAATTCTTGAACC+TGG | 0.485975 | 2_3:-34250583 | Msa0288680:CDS |
| AACCAGTTGGAAAGCCGAAA+AGG | 0.498927 | 2_3:-34248454 | Msa0288680:CDS |
| GATACAAAATGTGGACAAAA+GGG | 0.500320 | 2_3:-34248330 | Msa0288680:CDS |
| GGTTAAAGATCTTAGAGATA+AGG | 0.502958 | 2_3:-34250506 | Msa0288680:CDS |
| GAATACTAATGATCTTTCGT+TGG | 0.507943 | 2_3:-34249575 | Msa0288680:CDS |
| TTTAGAAACATCATTGGAAG+AGG | 0.508124 | 2_3:+34249420 | None:intergenic |
| ATCAGTACCATCTAAGCCAT+TGG | 0.511226 | 2_3:-34249992 | Msa0288680:CDS |
| AGATGTAGAAGTTATGTTGG+TGG | 0.518076 | 2_3:-34248355 | Msa0288680:CDS |
| AGTTCACAACCTCGCGAGAT+CGG | 0.518518 | 2_3:+34248488 | None:intergenic |
| CTAGCTTGATCATTTGACAT+TGG | 0.519894 | 2_3:+34249373 | None:intergenic |
| ATAATATCAGCATATCATAA+TGG | 0.521427 | 2_3:+34243498 | None:intergenic |
| TTAACAAGGAGCAGCAATCC+AGG | 0.521935 | 2_3:-34249625 | Msa0288680:CDS |
| ACGATGAATCGAGGATAGAA+AGG | 0.525038 | 2_3:-34248417 | Msa0288680:CDS |
| AACTCTGCATCGGATTCAGT+TGG | 0.525865 | 2_3:+34248673 | None:intergenic |
| AAAGGTCTACAGACAAGGAC+TGG | 0.530185 | 2_3:-34249792 | Msa0288680:CDS |
| CTGAGACTGGACTTGGTTGT+CGG | 0.531418 | 2_3:+34248924 | None:intergenic |
| GTGGACAAAAGGGTTTGAAA+TGG | 0.534070 | 2_3:-34248320 | Msa0288680:CDS |
| GCCTTTGCTTGGGAGGACCC+AGG | 0.534090 | 2_3:+34250565 | None:intergenic |
| CAGCTTCTTCAACATCAACT+AGG | 0.535267 | 2_3:-34248642 | Msa0288680:CDS |
| TGTAGAAGTTATGTTGGTGG+AGG | 0.536172 | 2_3:-34248352 | Msa0288680:CDS |
| TTCACTTGGCCGATCTCGCG+AGG | 0.539132 | 2_3:-34248497 | Msa0288680:CDS |
| AGCGCATTTGGCATCATCGA+CGG | 0.545183 | 2_3:-34250539 | Msa0288680:CDS |
| TCTGTTGCACTCCTAGATTG+AGG | 0.549981 | 2_3:+34249332 | None:intergenic |
| TTCTATGGTTGATGAGCTTG+TGG | 0.550344 | 2_3:-34248230 | Msa0288680:CDS |
| ATGTTTGCAGGGTGATGAGA+TGG | 0.551107 | 2_3:-34248966 | Msa0288680:intron |
| TGAGAAAGATTTCAAGACGT+TGG | 0.551143 | 2_3:-34243648 | Msa0288680:CDS |
| AAATGGTGAAAAGAAAAGAC+TGG | 0.552136 | 2_3:-34248303 | Msa0288680:CDS |
| GTAATTGGTGGTGATGCCTT+GGG | 0.553241 | 2_3:-34249490 | Msa0288680:CDS |
| ATCATTGAAACATAAATCAT+GGG | 0.554865 | 2_3:-34249224 | Msa0288680:intron |
| CAAGGTAGAAAAGTTACGAC+TGG | 0.558357 | 2_3:-34249958 | Msa0288680:CDS |
| TTGGTAGATCATCAACTACA+TGG | 0.558692 | 2_3:-34248576 | Msa0288680:CDS |
| AAATTTCTCAAAGAACAAGC+AGG | 0.560765 | 2_3:-34250405 | Msa0288680:CDS |
| GGTGAAAAGAAAAGACTGGT+TGG | 0.561563 | 2_3:-34248299 | Msa0288680:CDS |
| CCCAGGTTCAAGAATTCTTG+TGG | 0.563661 | 2_3:+34250582 | None:intergenic |
| CCAATGATGTTTCTAAAGTG+AGG | 0.569388 | 2_3:-34249414 | Msa0288680:CDS |
| TCAAGAACTGAGACTGGACT+TGG | 0.570363 | 2_3:+34248917 | None:intergenic |
| ATAGGATACAATGTAATTGG+TGG | 0.572381 | 2_3:-34249502 | Msa0288680:CDS |
| TAAAGATCTTAGAGATAAGG+TGG | 0.573035 | 2_3:-34250503 | Msa0288680:CDS |
| TAGCCAATATGGAAAGTGGT+TGG | 0.575562 | 2_3:-34248194 | Msa0288680:CDS |
| AAGGTGGACTCTTCGCAGAA+AGG | 0.576510 | 2_3:-34250487 | Msa0288680:CDS |
| CGAGTAATAAACAATATGGT+GGG | 0.579550 | 2_3:-34249705 | Msa0288680:CDS |
| ATTCAAGCTCAAGAAATCCA+TGG | 0.579795 | 2_3:-34248721 | Msa0288680:CDS |
| TGATTGTGTGAGTGAATGCA+TGG | 0.581219 | 2_3:-34248383 | Msa0288680:CDS |
| TGCTTGATACAGACAATACA+AGG | 0.581399 | 2_3:-34249531 | Msa0288680:CDS |
| TCCATTGCAAAATCTAAAGT+CGG | 0.581445 | 2_3:-34249895 | Msa0288680:CDS |
| TGAGTAGCCAATATGGAAAG+TGG | 0.584195 | 2_3:-34248198 | Msa0288680:CDS |
| GACTCGGCTGACCTTTGAGT+AGG | 0.586608 | 2_3:+34250370 | None:intergenic |
| GAATCTTCTTCTGCGTGTGT+AGG | 0.589839 | 2_3:+34250271 | None:intergenic |
| TGATGTTGAAGAAGCTGAGT+CGG | 0.591186 | 2_3:+34248648 | None:intergenic |
| GCGAGTAATAAACAATATGG+TGG | 0.591690 | 2_3:-34249706 | Msa0288680:CDS |
| ACCTGGGTCCTCCCAAGCAA+AGG | 0.594584 | 2_3:-34250566 | Msa0288680:CDS |
| ATCATCGACGGTCTCACTAA+GGG | 0.595032 | 2_3:-34250527 | Msa0288680:CDS |
| CCATTGGTTTCCAACTCGCA+AGG | 0.595241 | 2_3:-34249976 | Msa0288680:CDS |
| GTATTCTTTCCACCTTGTCG+AGG | 0.598057 | 2_3:+34249592 | None:intergenic |
| TCTTTGAACAAAAGCTGGAA+CGG | 0.605500 | 2_3:-34250319 | Msa0288680:CDS |
| TGTCAATGGAGAGACCTAAG+AGG | 0.606983 | 2_3:-34243607 | Msa0288680:CDS |
| CATTCACTACACCATTAACA+AGG | 0.608076 | 2_3:-34249639 | Msa0288680:CDS |
| ACACTTCACAGCATTCGACT+CGG | 0.608920 | 2_3:+34250354 | None:intergenic |
| GTTGGCAAAAGATTTGTACA+AGG | 0.617314 | 2_3:-34248281 | Msa0288680:CDS |
| CCTTGCGAGTTGGAAACCAA+TGG | 0.620891 | 2_3:+34249976 | None:intergenic |
| ACTATGATAAAGAAGCAGAC+AGG | 0.622027 | 2_3:-34248619 | Msa0288680:CDS |
| TGAGTCGGATAACTCTGCAT+CGG | 0.630221 | 2_3:+34248663 | None:intergenic |
| GGACGGCATAGAAGCTCAAG+TGG | 0.631619 | 2_3:-34249922 | Msa0288680:CDS |
| GACATTGGTGCTGAAACAGA+AGG | 0.634881 | 2_3:+34249388 | None:intergenic |
| CTGGAGATTCCTCTTATGGA+CGG | 0.637212 | 2_3:-34249939 | Msa0288680:CDS |
| CAGTTGGAAAGCCGAAAAGG+AGG | 0.638350 | 2_3:-34248451 | Msa0288680:CDS |
| GACAGTTTAAACAGTAGCTG+TGG | 0.639820 | 2_3:-34249283 | Msa0288680:CDS |
| AAAGAAAAGGTCTACAGACA+AGG | 0.643351 | 2_3:-34249797 | Msa0288680:CDS |
| AATTTCTCAAAGAACAAGCA+GGG | 0.647704 | 2_3:-34250404 | Msa0288680:CDS |
| CTGTTCTAAAAGGATACCCA+AGG | 0.651281 | 2_3:+34249474 | None:intergenic |
| TGGTAGATCATCAACTACAT+GGG | 0.652706 | 2_3:-34248575 | Msa0288680:CDS |
| CTGTGAATCCTCGATGAGCG+CGG | 0.653212 | 2_3:-34248873 | Msa0288680:CDS |
| TCTCATCAGAACCTACTCAA+AGG | 0.656392 | 2_3:-34250381 | Msa0288680:CDS |
| GGTAACATCCGCGCTCATCG+AGG | 0.659506 | 2_3:+34248865 | None:intergenic |
| AAAATGAAATTCTATACACC+AGG | 0.659647 | 2_3:-34249837 | Msa0288680:CDS |
| TGATTCTGGAAGATTGGTGA+AGG | 0.660187 | 2_3:+34249246 | None:intergenic |
| TCAAGAGCGACGATGAATCG+AGG | 0.660983 | 2_3:-34248426 | Msa0288680:CDS |
| CAAAAGCTGGAACGGAACAG+CGG | 0.664534 | 2_3:-34250311 | Msa0288680:CDS |
| AAGTTGAGGGAATTGACAAG+TGG | 0.671342 | 2_3:-34249451 | Msa0288680:CDS |
| GGTTCTGTGACACCTCGACA+AGG | 0.671483 | 2_3:-34249604 | Msa0288680:CDS |
| TTGGTGGAGGATACAAAATG+TGG | 0.699477 | 2_3:-34248339 | Msa0288680:CDS |
| TAATGGTGTAGTGAATGTGA+AGG | 0.701874 | 2_3:+34249645 | None:intergenic |
| TCTGTGACACCTCGACAAGG+TGG | 0.707322 | 2_3:-34249601 | Msa0288680:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAAAAAATTATTCAATAAT+TGG | - | chr2_3:34245062-34245081 | Msa0288680:intron | 10.0% |
| !!! | TTTACATGTATTTTAATTTT+TGG | - | chr2_3:34247009-34247028 | Msa0288680:intron | 10.0% |
| !!! | TTAAATTTTTTTATTGTTAC+TGG | + | chr2_3:34247254-34247273 | None:intergenic | 10.0% |
| !!! | AAATTTAATTTTGATTTCTA+TGG | - | chr2_3:34247266-34247285 | Msa0288680:intron | 10.0% |
| !!! | TCTATAATTTTATAAATTTG+AGG | - | chr2_3:34247527-34247546 | Msa0288680:intron | 10.0% |
| !!! | TTTTTTATCTAATTTATAGT+TGG | - | chr2_3:34248088-34248107 | Msa0288680:intron | 10.0% |
| !!! | AATTTTTTTCTATTAATGTT+TGG | - | chr2_3:34248532-34248551 | Msa0288680:CDS | 10.0% |
| !! | TAATCATTACAAATATTATT+AGG | + | chr2_3:34248713-34248732 | None:intergenic | 10.0% |
| !! | TAAAATTATATACTAAAATG+TGG | + | chr2_3:34249451-34249470 | None:intergenic | 10.0% |
| !!! | TAACTTGTATAATATAATTT+GGG | + | chr2_3:34249646-34249665 | None:intergenic | 10.0% |
| !! | ATTCTTCTTTGAATAATAAA+GGG | - | chr2_3:34243849-34243868 | Msa0288680:intron | 15.0% |
| !! | TATAAATTAGACAACAAATA+TGG | + | chr2_3:34244918-34244937 | None:intergenic | 15.0% |
| !! | TGATCAAATATTTAATTCTT+TGG | - | chr2_3:34245970-34245989 | Msa0288680:intron | 15.0% |
| !! | CAAAATAAAATGAAGAAATA+GGG | + | chr2_3:34247300-34247319 | None:intergenic | 15.0% |
| !! | TCCAAATTTATAATTGAATA+TGG | - | chr2_3:34248162-34248181 | Msa0288680:intron | 15.0% |
| !! | GTCAAGAATAAATATATTTA+TGG | + | chr2_3:34248280-34248299 | None:intergenic | 15.0% |
| !! | AAAAACATATGAATTATCAA+AGG | + | chr2_3:34248466-34248485 | None:intergenic | 15.0% |
| !! | AACATTAGAAATATTCAATA+AGG | - | chr2_3:34248602-34248621 | Msa0288680:CDS | 15.0% |
| !! | TAAAATTTCACTATGATAAA+AGG | - | chr2_3:34249271-34249290 | Msa0288680:CDS | 15.0% |
| !!! | CTAACTTGTATAATATAATT+TGG | + | chr2_3:34249647-34249666 | None:intergenic | 15.0% |
| !! | TAAAAAAAAAAGTAGAAAGA+GGG | + | chr2_3:34249862-34249881 | None:intergenic | 15.0% |
| !! | TGTATATTACATCTAATTTA+TGG | + | chr2_3:34250035-34250054 | None:intergenic | 15.0% |
| !! | ACAAATCTATTCTAATAAAA+AGG | + | chr2_3:34250138-34250157 | None:intergenic | 15.0% |
| !!! | TTATTAGAATAGATTTGTTT+TGG | - | chr2_3:34250140-34250159 | Msa0288680:intron | 15.0% |
| !! | AGAAAATAAATGGAATAAAA+TGG | + | chr2_3:34250551-34250570 | None:intergenic | 15.0% |
| !! | TGAAAAATGAAGAAAATAAA+TGG | + | chr2_3:34250561-34250580 | None:intergenic | 15.0% |
| !! | GATTCTTCTTTGAATAATAA+AGG | - | chr2_3:34243848-34243867 | Msa0288680:intron | 20.0% |
| !! | TGTCATTATTATCAATTGAA+TGG | + | chr2_3:34244088-34244107 | None:intergenic | 20.0% |
| !!! | ATAATTTTCCTAGAAAGAAA+AGG | - | chr2_3:34244291-34244310 | Msa0288680:intron | 20.0% |
| !! | ATCATTGAAACATAAATCAT+GGG | - | chr2_3:34244877-34244896 | Msa0288680:intron | 20.0% |
| !! | AAAACCATAAACAAAAAGTT+AGG | - | chr2_3:34245003-34245022 | Msa0288680:intron | 20.0% |
| !!! | TCAAAAAGTATAAATTTAGC+AGG | + | chr2_3:34245029-34245048 | None:intergenic | 20.0% |
| !!! | GCTAAATTTATACTTTTTGA+TGG | - | chr2_3:34245029-34245048 | Msa0288680:intron | 20.0% |
| !!! | TTGTTACTGTATATATTTTC+AGG | - | chr2_3:34245338-34245357 | Msa0288680:intron | 20.0% |
| !! | TGCTTGTATATTATTAAGAT+AGG | + | chr2_3:34246057-34246076 | None:intergenic | 20.0% |
| !! | ATCTTAATAATATACAAGCA+TGG | - | chr2_3:34246057-34246076 | Msa0288680:intron | 20.0% |
| !!! | TTTGAATTTTGAATTGAAGA+GGG | + | chr2_3:34246232-34246251 | None:intergenic | 20.0% |
| !!! | ATTTGAATTTTGAATTGAAG+AGG | + | chr2_3:34246233-34246252 | None:intergenic | 20.0% |
| !!! | AGAGAAATAAACTTTTAACA+GGG | + | chr2_3:34246365-34246384 | None:intergenic | 20.0% |
| !!! | ATGAAAAACTTTTATTGTCT+TGG | - | chr2_3:34246710-34246729 | Msa0288680:intron | 20.0% |
| !!! | TGAAAAACTTTTATTGTCTT+GGG | - | chr2_3:34246711-34246730 | Msa0288680:intron | 20.0% |
| !! | TGTCTCAATAAAAAAATTTC+AGG | - | chr2_3:34247169-34247188 | Msa0288680:intron | 20.0% |
| !! | GCAAAATAAAATGAAGAAAT+AGG | + | chr2_3:34247301-34247320 | None:intergenic | 20.0% |
| !! | AATGTCAGTTATAAAACAAA+AGG | + | chr2_3:34247883-34247902 | None:intergenic | 20.0% |
| !!! | ATTCTTCTTTTTCTTTGTTT+TGG | - | chr2_3:34247918-34247937 | Msa0288680:intron | 20.0% |
| !! | CAACAAAATAAGTCAAAAAT+AGG | + | chr2_3:34248008-34248027 | None:intergenic | 20.0% |
| !! | GCCATATTCAATTATAAATT+TGG | + | chr2_3:34248166-34248185 | None:intergenic | 20.0% |
| !!! | ACTTAAAAGATTTGTTTGTT+TGG | - | chr2_3:34248242-34248261 | Msa0288680:CDS | 20.0% |
| !!! | TTTTTCTATTAATGTTTGGT+AGG | - | chr2_3:34248536-34248555 | Msa0288680:CDS | 20.0% |
| !! | TGTAATGACAATTAATCAAA+AGG | - | chr2_3:34248795-34248814 | Msa0288680:intron | 20.0% |
| !! | GTAATGACAATTAATCAAAA+GGG | - | chr2_3:34248796-34248815 | Msa0288680:intron | 20.0% |
| !! | TTTCAAATTATTAGTTGTGT+CGG | + | chr2_3:34248852-34248871 | None:intergenic | 20.0% |
| !!! | TATGTTGGAGTTTTATAAAT+TGG | - | chr2_3:34249131-34249150 | Msa0288680:intron | 20.0% |
| !!! | ATGTTGGAGTTTTATAAATT+GGG | - | chr2_3:34249132-34249151 | Msa0288680:intron | 20.0% |
| !!! | ATTAGTCTTCATAATATGAA+TGG | - | chr2_3:34249538-34249557 | Msa0288680:CDS | 20.0% |
| !!! | CTTTTTAATCCATTTCTTTT+GGG | + | chr2_3:34249578-34249597 | None:intergenic | 20.0% |
| !! | AAAAAAAAAAGTAGAAAGAG+GGG | + | chr2_3:34249861-34249880 | None:intergenic | 20.0% |
| !! | GTAAAAAAAAAAGTAGAAAG+AGG | + | chr2_3:34249863-34249882 | None:intergenic | 20.0% |
| !! | ATGATAAATTATAGCATATG+TGG | - | chr2_3:34250205-34250224 | Msa0288680:intron | 20.0% |
| ! | AAAAGTGAATGTTCAAAGAA+GGG | - | chr2_3:34243898-34243917 | Msa0288680:intron | 25.0% |
| !! | TAGAATTTCATTTTCGCTAT+CGG | + | chr2_3:34244258-34244277 | None:intergenic | 25.0% |
| ! | AAAATGAAATTCTATACACC+AGG | - | chr2_3:34244264-34244283 | Msa0288680:intron | 25.0% |
| !! | AAATCAAGATATGTCGTTTA+CGG | - | chr2_3:34244796-34244815 | Msa0288680:intron | 25.0% |
| ! | TTATGTTTCAATGATGATTC+TGG | + | chr2_3:34244872-34244891 | None:intergenic | 25.0% |
| ! | CATCATTGAAACATAAATCA+TGG | - | chr2_3:34244876-34244895 | Msa0288680:intron | 25.0% |
| ! | GTATAATGTCATCAGTTTAA+TGG | - | chr2_3:34244978-34244997 | Msa0288680:intron | 25.0% |
| ! | TGAGTTAATGACTTACTTAA+TGG | + | chr2_3:34245112-34245131 | None:intergenic | 25.0% |
| ! | TTAATTTAATGACTCATGAG+TGG | - | chr2_3:34245309-34245328 | Msa0288680:intron | 25.0% |
| !!! | TCCATGGATTTAATTTTTCA+AGG | - | chr2_3:34245396-34245415 | Msa0288680:intron | 25.0% |
| ! | TCCTTGAAAAATTAAATCCA+TGG | + | chr2_3:34245400-34245419 | None:intergenic | 25.0% |
| !! | ACATTTTCTATGATGAAGTT+TGG | - | chr2_3:34245506-34245525 | Msa0288680:intron | 25.0% |
| ! | CAATGTTGAGTTAATGTATA+TGG | - | chr2_3:34245577-34245596 | Msa0288680:intron | 25.0% |
| !! | ATGTATATGGATTTTTCACT+TGG | - | chr2_3:34245590-34245609 | Msa0288680:intron | 25.0% |
| !! | AGATTTGTACAAGGAAATTT+TGG | - | chr2_3:34245829-34245848 | Msa0288680:intron | 25.0% |
| !! | GATTTGTACAAGGAAATTTT+GGG | - | chr2_3:34245830-34245849 | Msa0288680:intron | 25.0% |
| !! | GAGAGAAATAAACTTTTAAC+AGG | + | chr2_3:34246366-34246385 | None:intergenic | 25.0% |
| ! | CTGAACAAAATCAAATCAAA+AGG | + | chr2_3:34246907-34246926 | None:intergenic | 25.0% |
| ! | TTTCTGCTTATGAATCTATT+TGG | - | chr2_3:34246943-34246962 | Msa0288680:intron | 25.0% |
| !!! | AATGAAAACCCTGTTTTTAA+TGG | - | chr2_3:34246986-34247005 | Msa0288680:intron | 25.0% |
| ! | CATGTAAACCATTAAAAACA+GGG | + | chr2_3:34246997-34247016 | None:intergenic | 25.0% |
| ! | ACATGTAAACCATTAAAAAC+AGG | + | chr2_3:34246998-34247017 | None:intergenic | 25.0% |
| ! | AACCATATTTAATGTGTACT+TGG | - | chr2_3:34247552-34247571 | Msa0288680:intron | 25.0% |
| !! | TTGGAGACATAAATGTTTTA+AGG | - | chr2_3:34247571-34247590 | Msa0288680:intron | 25.0% |
| !! | GAGTTTAGTTTATGTTGTTA+AGG | - | chr2_3:34247667-34247686 | Msa0288680:intron | 25.0% |
| ! | GTCTTTATATGTGTGATTTA+TGG | - | chr2_3:34247693-34247712 | Msa0288680:intron | 25.0% |
| !! | TGTTTTGTACTGTTAATTGT+TGG | - | chr2_3:34247774-34247793 | Msa0288680:intron | 25.0% |
| ! | TCAGAGAAAGATTCTATAAA+AGG | - | chr2_3:34247842-34247861 | Msa0288680:intron | 25.0% |
| ! | CAGAGAAAGATTCTATAAAA+GGG | - | chr2_3:34247843-34247862 | Msa0288680:intron | 25.0% |
| ! | AGAGAAAGATTCTATAAAAG+GGG | - | chr2_3:34247844-34247863 | Msa0288680:intron | 25.0% |
| !! | TATTTGAAATAAAGACCATG+AGG | - | chr2_3:34247971-34247990 | Msa0288680:intron | 25.0% |
| !!! | ACTTATTTTGTTGTTGTTAC+CGG | - | chr2_3:34248015-34248034 | Msa0288680:intron | 25.0% |
| ! | CGTAAAAATTGTATTTGATG+TGG | - | chr2_3:34248118-34248137 | Msa0288680:intron | 25.0% |
| ! | GAAACATAAACACATCAAAA+TGG | + | chr2_3:34248188-34248207 | None:intergenic | 25.0% |
| ! | TTCACTCTAATCAATAATAG+TGG | + | chr2_3:34248223-34248242 | None:intergenic | 25.0% |
| !! | AAAAGATTTGTTTGTTTGGT+TGG | - | chr2_3:34248246-34248265 | Msa0288680:CDS | 25.0% |
| !!! | ACCATAATTTTGTTTGTTTC+AGG | - | chr2_3:34248312-34248331 | Msa0288680:CDS | 25.0% |
| ! | ACCTGAAACAAACAAAATTA+TGG | + | chr2_3:34248316-34248335 | None:intergenic | 25.0% |
| !!! | TCTTAAGTTCTTTTGGTAAT+TGG | - | chr2_3:34248335-34248354 | Msa0288680:CDS | 25.0% |
| ! | TTAGAGAGAGTTTGAAAAAA+GGG | + | chr2_3:34248443-34248462 | None:intergenic | 25.0% |
| ! | ATTGTCATTACAACAATAGA+AGG | + | chr2_3:34248787-34248806 | None:intergenic | 25.0% |
| ! | GATTAAAGGAAAAATACCTT+TGG | + | chr2_3:34249106-34249125 | None:intergenic | 25.0% |
| !!! | TCCTTTAATCAGTTTTATGT+TGG | - | chr2_3:34249116-34249135 | Msa0288680:intron | 25.0% |
| ! | TCCAACATAAAACTGATTAA+AGG | + | chr2_3:34249120-34249139 | None:intergenic | 25.0% |
| ! | AGCATATTCACATTTATTCA+AGG | + | chr2_3:34249164-34249183 | None:intergenic | 25.0% |
| ! | GTAATTTATCATTCCAAACA+TGG | + | chr2_3:34249235-34249254 | None:intergenic | 25.0% |
| ! | ATTCTTACTGTCAAATTACT+AGG | - | chr2_3:34249331-34249350 | Msa0288680:CDS | 25.0% |
| ! | ACAATTTACCATACTTTATG+AGG | + | chr2_3:34249508-34249527 | None:intergenic | 25.0% |
| ! | AAGTATGGTAAATTGTGTAT+TGG | - | chr2_3:34249512-34249531 | Msa0288680:CDS | 25.0% |
| !! | CCTTTTTAATCCATTTCTTT+TGG | + | chr2_3:34249579-34249598 | None:intergenic | 25.0% |
| !!! | CCAAAAGAAATGGATTAAAA+AGG | - | chr2_3:34249576-34249595 | Msa0288680:CDS | 25.0% |
| ! | AAAAAAAAAGTAGAAAGAGG+GGG | + | chr2_3:34249860-34249879 | None:intergenic | 25.0% |
| ! | ATTTCTCATTACGTATTAGA+AGG | - | chr2_3:34249996-34250015 | Msa0288680:CDS | 25.0% |
| !!! | TGATAAAAATTTGCTGCTTT+TGG | - | chr2_3:34250066-34250085 | Msa0288680:CDS | 25.0% |
| ! | AAGCTCAAACAATCTTAATA+TGG | + | chr2_3:34250114-34250133 | None:intergenic | 25.0% |
| ! | ATATCATCTCATTATGGTAA+AGG | + | chr2_3:34250249-34250268 | None:intergenic | 25.0% |
| ! | ACTGAAAGAAAAAATTGCAA+AGG | + | chr2_3:34250424-34250443 | None:intergenic | 25.0% |
| !!! | TTTGCAATTTTTTCTTTCAG+TGG | - | chr2_3:34250423-34250442 | Msa0288680:CDS | 25.0% |
| GGTTAAAGATCTTAGAGATA+AGG | - | chr2_3:34243595-34243614 | Msa0288680:CDS | 30.0% | |
| TAAAGATCTTAGAGATAAGG+TGG | - | chr2_3:34243598-34243617 | Msa0288680:CDS | 30.0% | |
| AAATTTCTCAAAGAACAAGC+AGG | - | chr2_3:34243696-34243715 | Msa0288680:intron | 30.0% | |
| AATTTCTCAAAGAACAAGCA+GGG | - | chr2_3:34243697-34243716 | Msa0288680:intron | 30.0% | |
| ! | AATGCTGTGAAGTGTTTAAA+GGG | - | chr2_3:34243755-34243774 | Msa0288680:intron | 30.0% |
| !! | TTTGAACATTCACTTTTGCT+TGG | + | chr2_3:34243895-34243914 | None:intergenic | 30.0% |
| CAAAAGTGAATGTTCAAAGA+AGG | - | chr2_3:34243897-34243916 | Msa0288680:intron | 30.0% | |
| ! | TTTTCTGAGCAAATAGTCTT+AGG | + | chr2_3:34243998-34244017 | None:intergenic | 30.0% |
| TTGCTCAGAAAAATTTGCAT+AGG | - | chr2_3:34244006-34244025 | Msa0288680:intron | 30.0% | |
| AATTTGCATAGGAAATCTTC+TGG | - | chr2_3:34244017-34244036 | Msa0288680:intron | 30.0% | |
| TGAGAACATTAGAAGAATTC+TGG | + | chr2_3:34244043-34244062 | None:intergenic | 30.0% | |
| AGAATTCTTCTAATGTTCTC+AGG | - | chr2_3:34244042-34244061 | Msa0288680:intron | 30.0% | |
| ! | TCCATTGCAAAATCTAAAGT+CGG | - | chr2_3:34244206-34244225 | Msa0288680:intron | 30.0% |
| TCTAGGAAAATTATTTGTCC+TGG | + | chr2_3:34244285-34244304 | None:intergenic | 30.0% | |
| GTAGCGAGTAATAAACAATA+TGG | - | chr2_3:34244392-34244411 | Msa0288680:intron | 30.0% | |
| CGAGTAATAAACAATATGGT+GGG | - | chr2_3:34244396-34244415 | Msa0288680:intron | 30.0% | |
| AGAAGTGAAAAAGAAAGACA+TGG | - | chr2_3:34244424-34244443 | Msa0288680:intron | 30.0% | |
| GAATACTAATGATCTTTCGT+TGG | - | chr2_3:34244526-34244545 | Msa0288680:intron | 30.0% | |
| CCAATTACATTGTATCCTAT+TGG | + | chr2_3:34244599-34244618 | None:intergenic | 30.0% | |
| CCAATAGGATACAATGTAAT+TGG | - | chr2_3:34244596-34244615 | Msa0288680:intron | 30.0% | |
| ATAGGATACAATGTAATTGG+TGG | - | chr2_3:34244599-34244618 | Msa0288680:intron | 30.0% | |
| TTTAGAAACATCATTGGAAG+AGG | + | chr2_3:34244684-34244703 | None:intergenic | 30.0% | |
| ! | AATATAGTTAGCCTCAATCT+AGG | - | chr2_3:34244758-34244777 | Msa0288680:intron | 30.0% |
| ATTAACTCAAAGATGTTTGC+AGG | - | chr2_3:34245123-34245142 | Msa0288680:intron | 30.0% | |
| TTAACTCAAAGATGTTTGCA+GGG | - | chr2_3:34245124-34245143 | Msa0288680:intron | 30.0% | |
| ! | AGTTCTTGAGTCTTCATTTT+CGG | - | chr2_3:34245198-34245217 | Msa0288680:intron | 30.0% |
| AGGTAAGTCATGCTTAAAAA+AGG | - | chr2_3:34245267-34245286 | Msa0288680:intron | 30.0% | |
| CTTAAAAAAGGACTGTAGTT+TGG | - | chr2_3:34245279-34245298 | Msa0288680:intron | 30.0% | |
| TTGAGATGTAGAAGTTATGT+TGG | - | chr2_3:34245743-34245762 | Msa0288680:intron | 30.0% | |
| GATACAAAATGTGGACAAAA+GGG | - | chr2_3:34245771-34245790 | Msa0288680:intron | 30.0% | |
| AAATGGTGAAAAGAAAAGAC+TGG | - | chr2_3:34245798-34245817 | Msa0288680:intron | 30.0% | |
| !!! | AAGGAAATTTTGGGTTTGAA+AGG | - | chr2_3:34245839-34245858 | Msa0288680:intron | 30.0% |
| !!! | AGGAAATTTTGGGTTTGAAA+GGG | - | chr2_3:34245840-34245859 | Msa0288680:intron | 30.0% |
| TATTGTGTGAATGCTTAAAG+TGG | + | chr2_3:34246178-34246197 | None:intergenic | 30.0% | |
| CAGGGAGAAAAAAAAAAGTT+TGG | + | chr2_3:34246347-34246366 | None:intergenic | 30.0% | |
| AATTGTGAAAGAGAGATTGA+AGG | + | chr2_3:34246468-34246487 | None:intergenic | 30.0% | |
| TAGGTTAGATTGAACAAAGA+CGG | + | chr2_3:34246557-34246576 | None:intergenic | 30.0% | |
| GATTACAGAAACACAGATTT+AGG | - | chr2_3:34246657-34246676 | Msa0288680:intron | 30.0% | |
| !! | TTTTCAAAGGTACAACTTTC+TGG | - | chr2_3:34246847-34246866 | Msa0288680:intron | 30.0% |
| TGCTTATGAATCTATTTGGT+TGG | - | chr2_3:34246947-34246966 | Msa0288680:intron | 30.0% | |
| ! | GAGACATTTTCTTAAACACT+TGG | + | chr2_3:34247072-34247091 | None:intergenic | 30.0% |
| TTCAATGTCTCTATTTGTAC+AGG | - | chr2_3:34247324-34247343 | Msa0288680:intron | 30.0% | |
| GTACAGGAGAGAAAAAAAAA+AGG | - | chr2_3:34247340-34247359 | Msa0288680:intron | 30.0% | |
| ! | AGTAGAATTTTGGATAGCTT+TGG | - | chr2_3:34247404-34247423 | Msa0288680:intron | 30.0% |
| CTCCAAGTACACATTAAATA+TGG | + | chr2_3:34247557-34247576 | None:intergenic | 30.0% | |
| GAAGCATATTAAGAGATAAG+TGG | + | chr2_3:34247741-34247760 | None:intergenic | 30.0% | |
| CTCTTAATATGCTTCTTTGA+AGG | - | chr2_3:34247746-34247765 | Msa0288680:intron | 30.0% | |
| GAGAAAGATTCTATAAAAGG+GGG | - | chr2_3:34247845-34247864 | Msa0288680:intron | 30.0% | |
| AGAAAGATTCTATAAAAGGG+GGG | - | chr2_3:34247846-34247865 | Msa0288680:intron | 30.0% | |
| AAGAAGAATCAGAACACAAA+AGG | + | chr2_3:34247907-34247926 | None:intergenic | 30.0% | |
| !!! | TTTTGGCAGATTTTAAAGCA+TGG | - | chr2_3:34247935-34247954 | Msa0288680:intron | 30.0% |
| TAGGAAACAAAATTACCTCA+TGG | + | chr2_3:34247989-34248008 | None:intergenic | 30.0% | |
| !! | ACCATGCTTTAAAATTAAGC+CGG | + | chr2_3:34248037-34248056 | None:intergenic | 30.0% |
| !! | TTTCAGGTCTTAAGTTCTTT+TGG | - | chr2_3:34248328-34248347 | Msa0288680:CDS | 30.0% |
| GTTAGAGAGAGTTTGAAAAA+AGG | + | chr2_3:34248444-34248463 | None:intergenic | 30.0% | |
| TAACCTCATTGAATTCAAGT+TGG | - | chr2_3:34248486-34248505 | Msa0288680:CDS | 30.0% | |
| TATCCAACTTGAATTCAATG+AGG | + | chr2_3:34248492-34248511 | None:intergenic | 30.0% | |
| ! | TATTTCTAATGTTAGCTACC+AGG | + | chr2_3:34248595-34248614 | None:intergenic | 30.0% |
| GAAAGCTTAATCATTAAGCA+CGG | + | chr2_3:34248972-34248991 | None:intergenic | 30.0% | |
| !! | GGAGTTTTATAAATTGGGAT+TGG | - | chr2_3:34249137-34249156 | Msa0288680:intron | 30.0% |
| AATGTGGTCACTATGATAAA+AGG | + | chr2_3:34249435-34249454 | None:intergenic | 30.0% | |
| TTACTTTGCCTCATAAAGTA+TGG | - | chr2_3:34249497-34249516 | Msa0288680:CDS | 30.0% | |
| GTTACTTAACCCAAAAGAAA+TGG | - | chr2_3:34249566-34249585 | Msa0288680:CDS | 30.0% | |
| GGAAAAGATTGTTTACTAAG+AGG | - | chr2_3:34249597-34249616 | Msa0288680:CDS | 30.0% | |
| GGTTGTAATTGAAATGCAAT+CGG | + | chr2_3:34249625-34249644 | None:intergenic | 30.0% | |
| ACTTGATCCAATTTGAATTG+TGG | + | chr2_3:34249835-34249854 | None:intergenic | 30.0% | |
| !!! | GATTTGTTTTGGTGTTTTCA+TGG | - | chr2_3:34250151-34250170 | Msa0288680:intron | 30.0% |
| CATCTCATATCATCTCATTA+TGG | + | chr2_3:34250255-34250274 | None:intergenic | 30.0% | |
| GTTTCTTTATTGCGTTTGTT+AGG | - | chr2_3:34250302-34250321 | Msa0288680:CDS | 30.0% | |
| ! | GAATGCTGTGAAGTGTTTAA+AGG | - | chr2_3:34243754-34243773 | Msa0288680:intron | 35.0% |
| GACAATCTTTGAACAAAAGC+TGG | - | chr2_3:34243777-34243796 | Msa0288680:intron | 35.0% | |
| TCTTTGAACAAAAGCTGGAA+CGG | - | chr2_3:34243782-34243801 | Msa0288680:intron | 35.0% | |
| ! | TCCGACTTTAGATTTTGCAA+TGG | + | chr2_3:34244210-34244229 | None:intergenic | 35.0% |
| ! | TCTGTAGACCTTTTCTTTCT+AGG | + | chr2_3:34244302-34244321 | None:intergenic | 35.0% |
| AAAGAAAAGGTCTACAGACA+AGG | - | chr2_3:34244304-34244323 | Msa0288680:intron | 35.0% | |
| GCGAGTAATAAACAATATGG+TGG | - | chr2_3:34244395-34244414 | Msa0288680:intron | 35.0% | |
| TAATGGTGTAGTGAATGTGA+AGG | + | chr2_3:34244459-34244478 | None:intergenic | 35.0% | |
| CATTCACTACACCATTAACA+AGG | - | chr2_3:34244462-34244481 | Msa0288680:intron | 35.0% | |
| TGCTTGATACAGACAATACA+AGG | - | chr2_3:34244570-34244589 | Msa0288680:intron | 35.0% | |
| !!! | TCCTTTTAGAACAGAAGTTG+AGG | - | chr2_3:34244636-34244655 | Msa0288680:intron | 35.0% |
| !!! | CCTTTTAGAACAGAAGTTGA+GGG | - | chr2_3:34244637-34244656 | Msa0288680:intron | 35.0% |
| ! | CCTCACTTTAGAAACATCAT+TGG | + | chr2_3:34244690-34244709 | None:intergenic | 35.0% |
| !! | CCAATGATGTTTCTAAAGTG+AGG | - | chr2_3:34244687-34244706 | Msa0288680:intron | 35.0% |
| CTAGCTTGATCATTTGACAT+TGG | + | chr2_3:34244731-34244750 | None:intergenic | 35.0% | |
| ! | CAATGATGATTCTGGAAGAT+TGG | + | chr2_3:34244864-34244883 | None:intergenic | 35.0% |
| !! | CAGGCCTAACTTTTTGTTTA+TGG | + | chr2_3:34245010-34245029 | None:intergenic | 35.0% |
| AAAAAAGGACTGTAGTTTGG+TGG | - | chr2_3:34245282-34245301 | Msa0288680:intron | 35.0% | |
| ATTCAAGCTCAAGAAATCCA+TGG | - | chr2_3:34245380-34245399 | Msa0288680:intron | 35.0% | |
| ACTATGATAAAGAAGCAGAC+AGG | - | chr2_3:34245482-34245501 | Msa0288680:intron | 35.0% | |
| TTGGTAGATCATCAACTACA+TGG | - | chr2_3:34245525-34245544 | Msa0288680:intron | 35.0% | |
| TGGTAGATCATCAACTACAT+GGG | - | chr2_3:34245526-34245545 | Msa0288680:intron | 35.0% | |
| AGATGTAGAAGTTATGTTGG+TGG | - | chr2_3:34245746-34245765 | Msa0288680:intron | 35.0% | |
| GGATACAAAATGTGGACAAA+AGG | - | chr2_3:34245770-34245789 | Msa0288680:intron | 35.0% | |
| GTTGGCAAAAGATTTGTACA+AGG | - | chr2_3:34245820-34245839 | Msa0288680:intron | 35.0% | |
| AAGGATATGAGTAGCCAATA+TGG | - | chr2_3:34245896-34245915 | Msa0288680:intron | 35.0% | |
| AATCCAACCACTTTCCATAT+TGG | + | chr2_3:34245913-34245932 | None:intergenic | 35.0% | |
| !! | GAGGTTGATGCTTATGAATT+TGG | - | chr2_3:34245935-34245954 | Msa0288680:intron | 35.0% |
| ! | AATGATGATGTGACATGAAG+AGG | + | chr2_3:34246135-34246154 | None:intergenic | 35.0% |
| GGATAAGAGAAAAAGTAGGA+GGG | + | chr2_3:34246281-34246300 | None:intergenic | 35.0% | |
| GTTGGGATAAGAGAAAAAGT+AGG | + | chr2_3:34246285-34246304 | None:intergenic | 35.0% | |
| ACTTGAAAGTGGTGTTTGTT+GGG | + | chr2_3:34246302-34246321 | None:intergenic | 35.0% | |
| GAGATAATGTGACTTGAAAG+TGG | + | chr2_3:34246313-34246332 | None:intergenic | 35.0% | |
| ! | ATTCTAGGAACAGAGAGAAA+GGG | + | chr2_3:34246417-34246436 | None:intergenic | 35.0% |
| TGTGATGAACTCTCAGATTT+AGG | + | chr2_3:34246576-34246595 | None:intergenic | 35.0% | |
| AGAAGCAGATTACGAAAACA+CGG | - | chr2_3:34246622-34246641 | Msa0288680:intron | 35.0% | |
| CTTCTTTCTTTCTCCTAATC+AGG | - | chr2_3:34246779-34246798 | Msa0288680:CDS | 35.0% | |
| ! | TTAGCAGGGATTCTTTTCAA+AGG | - | chr2_3:34246834-34246853 | Msa0288680:intron | 35.0% |
| ATGCAAGGAAAATAGAGACA+TGG | + | chr2_3:34247223-34247242 | None:intergenic | 35.0% | |
| TTACTGGTAAAGTGAATGCA+AGG | + | chr2_3:34247238-34247257 | None:intergenic | 35.0% | |
| TCCAATACTTGGAAGAAACA+GGG | + | chr2_3:34247379-34247398 | None:intergenic | 35.0% | |
| TTCCAATACTTGGAAGAAAC+AGG | + | chr2_3:34247380-34247399 | None:intergenic | 35.0% | |
| ! | TTGGAACTGCAGTAGAATTT+TGG | - | chr2_3:34247394-34247413 | Msa0288680:intron | 35.0% |
| !!! | ACCGGCTTAATTTTAAAGCA+TGG | - | chr2_3:34248033-34248052 | Msa0288680:intron | 35.0% |
| AAGGGTTATAGTATGAAGCA+CGG | - | chr2_3:34248814-34248833 | Msa0288680:intron | 35.0% | |
| TTCAGTGTAATTACAAGCGT+CGG | - | chr2_3:34248883-34248902 | Msa0288680:CDS | 35.0% | |
| GAAAGCAACATAGCATCAAT+GGG | + | chr2_3:34249034-34249053 | None:intergenic | 35.0% | |
| AGAAAGCAACATAGCATCAA+TGG | + | chr2_3:34249035-34249054 | None:intergenic | 35.0% | |
| AACATGGAGTTCAAGCATAT+AGG | + | chr2_3:34249219-34249238 | None:intergenic | 35.0% | |
| ATATGCTTGAACTCCATGTT+TGG | - | chr2_3:34249219-34249238 | Msa0288680:intron | 35.0% | |
| AGAATGAAACTCTCATGTCT+TGG | - | chr2_3:34249306-34249325 | Msa0288680:CDS | 35.0% | |
| ACTGTCAAATTACTAGGACA+AGG | - | chr2_3:34249337-34249356 | Msa0288680:CDS | 35.0% | |
| ! | ATTAACCCGTATGGCAATTT+TGG | - | chr2_3:34249381-34249400 | Msa0288680:CDS | 35.0% |
| TAGCTCAAATACAGGATGTA+TGG | + | chr2_3:34249702-34249721 | None:intergenic | 35.0% | |
| AGTAGTAGTAGCTCAAATAC+AGG | + | chr2_3:34249710-34249729 | None:intergenic | 35.0% | |
| !! | GTTTTTGTTGTACAGCTTTG+AGG | + | chr2_3:34249759-34249778 | None:intergenic | 35.0% |
| CAAAGCTGTACAACAAAAAC+AGG | - | chr2_3:34249759-34249778 | Msa0288680:CDS | 35.0% | |
| GGAATCTTTCACAGACAAAT+AGG | + | chr2_3:34249806-34249825 | None:intergenic | 35.0% | |
| TGATCCAATTTGAATTGTGG+AGG | + | chr2_3:34249832-34249851 | None:intergenic | 35.0% | |
| AAAATGTCAACAGAAGAGTG+TGG | + | chr2_3:34249889-34249908 | None:intergenic | 35.0% | |
| ! | ATGAGATGTGCATTTTTGCT+TGG | - | chr2_3:34250272-34250291 | Msa0288680:CDS | 35.0% |
| TGAGAAAGATTTCAAGACGT+TGG | - | chr2_3:34250453-34250472 | Msa0288680:CDS | 35.0% | |
| GCACATTGTCATTATGTCAA+TGG | - | chr2_3:34250480-34250499 | Msa0288680:CDS | 35.0% | |
| CCACAAGAATTCTTGAACCT+GGG | - | chr2_3:34243519-34243538 | Msa0288680:exon | 40.0% | |
| ACTGAAGATGTCGCAATAAG+AGG | + | chr2_3:34243641-34243660 | None:intergenic | 40.0% | |
| ! | CGACATCTTCAGTAGCTTTT+AGG | - | chr2_3:34243648-34243667 | Msa0288680:CDS | 40.0% |
| !!! | CTTCAGTAGCTTTTAGGACT+CGG | - | chr2_3:34243654-34243673 | Msa0288680:CDS | 40.0% |
| !!! | TTCAGTAGCTTTTAGGACTC+GGG | - | chr2_3:34243655-34243674 | Msa0288680:CDS | 40.0% |
| TCTCATCAGAACCTACTCAA+AGG | - | chr2_3:34243720-34243739 | Msa0288680:intron | 40.0% | |
| GTGAATGTTCAAAGAAGGGA+AGG | - | chr2_3:34243902-34243921 | Msa0288680:intron | 40.0% | |
| ! | TCATGTCGAGATGCTCTTTT+TGG | + | chr2_3:34243961-34243980 | None:intergenic | 40.0% |
| ! | AATAGTCTTAGGTGGCTGAT+TGG | + | chr2_3:34243987-34244006 | None:intergenic | 40.0% |
| ! | TCTGAGCAAATAGTCTTAGG+TGG | + | chr2_3:34243995-34244014 | None:intergenic | 40.0% |
| ATCAGTACCATCTAAGCCAT+TGG | - | chr2_3:34244109-34244128 | Msa0288680:intron | 40.0% | |
| TTGGAAACCAATGGCTTAGA+TGG | + | chr2_3:34244119-34244138 | None:intergenic | 40.0% | |
| ! | AACTTTTCTACCTTGCGAGT+TGG | + | chr2_3:34244138-34244157 | None:intergenic | 40.0% |
| CAAGGTAGAAAAGTTACGAC+TGG | - | chr2_3:34244143-34244162 | Msa0288680:intron | 40.0% | |
| GACAATACAAGGTCTCCAAT+AGG | - | chr2_3:34244581-34244600 | Msa0288680:intron | 40.0% | |
| !! | CTGTTCTAAAAGGATACCCA+AGG | + | chr2_3:34244630-34244649 | None:intergenic | 40.0% |
| ! | CCCTCAACTTCTGTTCTAAA+AGG | + | chr2_3:34244640-34244659 | None:intergenic | 40.0% |
| AAGTTGAGGGAATTGACAAG+TGG | - | chr2_3:34244650-34244669 | Msa0288680:intron | 40.0% | |
| GACAGTTTAAACAGTAGCTG+TGG | - | chr2_3:34244818-34244837 | Msa0288680:intron | 40.0% | |
| ! | TGATTCTGGAAGATTGGTGA+AGG | + | chr2_3:34244858-34244877 | None:intergenic | 40.0% |
| GCATGACTTACCTTCTATAC+TGG | + | chr2_3:34245260-34245279 | None:intergenic | 40.0% | |
| TGATGTTGAAGAAGCTGAGT+CGG | + | chr2_3:34245456-34245475 | None:intergenic | 40.0% | |
| CAGCTTCTTCAACATCAACT+AGG | - | chr2_3:34245459-34245478 | Msa0288680:intron | 40.0% | |
| ACGATGAATCGAGGATAGAA+AGG | - | chr2_3:34245684-34245703 | Msa0288680:intron | 40.0% | |
| TGATTGTGTGAGTGAATGCA+TGG | - | chr2_3:34245718-34245737 | Msa0288680:intron | 40.0% | |
| ! | TGTAGAAGTTATGTTGGTGG+AGG | - | chr2_3:34245749-34245768 | Msa0288680:intron | 40.0% |
| TTGGTGGAGGATACAAAATG+TGG | - | chr2_3:34245762-34245781 | Msa0288680:intron | 40.0% | |
| GTGGACAAAAGGGTTTGAAA+TGG | - | chr2_3:34245781-34245800 | Msa0288680:intron | 40.0% | |
| GGTGAAAAGAAAAGACTGGT+TGG | - | chr2_3:34245802-34245821 | Msa0288680:intron | 40.0% | |
| GAAAGGGATGAGAGATTCTA+TGG | - | chr2_3:34245856-34245875 | Msa0288680:intron | 40.0% | |
| !! | TTCTATGGTTGATGAGCTTG+TGG | - | chr2_3:34245871-34245890 | Msa0288680:intron | 40.0% |
| TGAGTAGCCAATATGGAAAG+TGG | - | chr2_3:34245903-34245922 | Msa0288680:intron | 40.0% | |
| TAGCCAATATGGAAAGTGGT+TGG | - | chr2_3:34245907-34245926 | Msa0288680:intron | 40.0% | |
| TGGAAAGTGGTTGGATTATG+AGG | - | chr2_3:34245916-34245935 | Msa0288680:intron | 40.0% | |
| AAGAGAAAAAGTAGGAGGGA+TGG | + | chr2_3:34246277-34246296 | None:intergenic | 40.0% | |
| GGGATAAGAGAAAAAGTAGG+AGG | + | chr2_3:34246282-34246301 | None:intergenic | 40.0% | |
| GACTTGAAAGTGGTGTTTGT+TGG | + | chr2_3:34246303-34246322 | None:intergenic | 40.0% | |
| ! | TTCTAGGAACAGAGAGAAAG+GGG | + | chr2_3:34246416-34246435 | None:intergenic | 40.0% |
| ! | GATTCTAGGAACAGAGAGAA+AGG | + | chr2_3:34246418-34246437 | None:intergenic | 40.0% |
| GTGAAAGAGAGATTGAAGGT+GGG | + | chr2_3:34246464-34246483 | None:intergenic | 40.0% | |
| TGTGAAAGAGAGATTGAAGG+TGG | + | chr2_3:34246465-34246484 | None:intergenic | 40.0% | |
| TTGAACAAAGACGGTGTGAA+AGG | + | chr2_3:34246548-34246567 | None:intergenic | 40.0% | |
| TTCTTTCAAGCTCTCGTTTG+CGG | + | chr2_3:34246606-34246625 | None:intergenic | 40.0% | |
| GGAAGCAGAAAGTTTCACTA+AGG | - | chr2_3:34246678-34246697 | Msa0288680:intron | 40.0% | |
| TCCTAATCAGGCATGATTAG+AGG | - | chr2_3:34246791-34246810 | Msa0288680:intron | 40.0% | |
| ACCTCTAATCATGCCTGATT+AGG | + | chr2_3:34246795-34246814 | None:intergenic | 40.0% | |
| ! | ATGCATTTGCTGAGTTAGCA+GGG | - | chr2_3:34246820-34246839 | Msa0288680:intron | 40.0% |
| TAGTACTCACCAAGTGTTTG+AGG | - | chr2_3:34247143-34247162 | Msa0288680:intron | 40.0% | |
| GAGACATTTCCTCAAACACT+TGG | + | chr2_3:34247155-34247174 | None:intergenic | 40.0% | |
| ! | ACCCTGTTTCTTCCAAGTAT+TGG | - | chr2_3:34247375-34247394 | Msa0288680:intron | 40.0% |
| TCTACTGCAGTTCCAATACT+TGG | + | chr2_3:34247390-34247409 | None:intergenic | 40.0% | |
| GAGAGAGTTTGAAAAAAGGG+TGG | + | chr2_3:34248440-34248459 | None:intergenic | 40.0% | |
| TCTAATGTTAGCTACCAGGT+TGG | + | chr2_3:34248591-34248610 | None:intergenic | 40.0% | |
| TCTCTACTGTGATGTAAGTG+AGG | + | chr2_3:34248688-34248707 | None:intergenic | 40.0% | |
| CAACATAGCATCAATGGGAT+TGG | + | chr2_3:34249029-34249048 | None:intergenic | 40.0% | |
| GCAGACATCAATCAAACCAA+AGG | - | chr2_3:34249087-34249106 | Msa0288680:intron | 40.0% | |
| !! | GTACAGCTTTGAGGTGTATA+TGG | + | chr2_3:34249750-34249769 | None:intergenic | 40.0% |
| CTTTCACAGACAAATAGGTG+AGG | + | chr2_3:34249801-34249820 | None:intergenic | 40.0% | |
| CAATTTGAATTGTGGAGGTG+AGG | + | chr2_3:34249827-34249846 | None:intergenic | 40.0% | |
| CTCACCTCCACAATTCAAAT+TGG | - | chr2_3:34249825-34249844 | Msa0288680:CDS | 40.0% | |
| ATGGTAAAGGAGAGTAACTC+AGG | + | chr2_3:34250236-34250255 | None:intergenic | 40.0% | |
| ! | TGCATTTTTGCTTGGTTGTG+TGG | - | chr2_3:34250280-34250299 | Msa0288680:CDS | 40.0% |
| AAGCAAAAGTTGTGCACATG+TGG | + | chr2_3:34250367-34250386 | None:intergenic | 40.0% | |
| ! | ACATGTGCACAACTTTTGCT+TGG | - | chr2_3:34250366-34250385 | Msa0288680:CDS | 40.0% |
| ! | CATGTGCACAACTTTTGCTT+GGG | - | chr2_3:34250367-34250386 | Msa0288680:CDS | 40.0% |
| ! | ATGTGCACAACTTTTGCTTG+GGG | - | chr2_3:34250368-34250387 | Msa0288680:CDS | 40.0% |
| TACAGTGAATGCTTCCTCTT+AGG | + | chr2_3:34250511-34250530 | None:intergenic | 40.0% | |
| GCCACAAGAATTCTTGAACC+TGG | - | chr2_3:34243518-34243537 | Msa0288680:exon | 45.0% | |
| CCCAGGTTCAAGAATTCTTG+TGG | + | chr2_3:34243522-34243541 | None:intergenic | 45.0% | |
| ! | ATGCGCTTTAGCCTTTGCTT+GGG | + | chr2_3:34243549-34243568 | None:intergenic | 45.0% |
| ! | AATGCGCTTTAGCCTTTGCT+TGG | + | chr2_3:34243550-34243569 | None:intergenic | 45.0% |
| AGCAAAGGCTAAAGCGCATT+TGG | - | chr2_3:34243550-34243569 | Msa0288680:CDS | 45.0% | |
| ATCATCGACGGTCTCACTAA+GGG | - | chr2_3:34243574-34243593 | Msa0288680:CDS | 45.0% | |
| ACACTTCACAGCATTCGACT+CGG | + | chr2_3:34243750-34243769 | None:intergenic | 45.0% | |
| GAATCTTCTTCTGCGTGTGT+AGG | + | chr2_3:34243833-34243852 | None:intergenic | 45.0% | |
| ACCGGTGGCAGAAATTTGAT+GGG | - | chr2_3:34243935-34243954 | Msa0288680:intron | 45.0% | |
| ACGACTGGAGATTCCTCTTA+TGG | - | chr2_3:34244158-34244177 | Msa0288680:intron | 45.0% | |
| CTGGAGATTCCTCTTATGGA+CGG | - | chr2_3:34244162-34244181 | Msa0288680:intron | 45.0% | |
| AAAGGTCTACAGACAAGGAC+TGG | - | chr2_3:34244309-34244328 | Msa0288680:intron | 45.0% | |
| ! | CTCGCTACATTTGACTTCAC+TGG | + | chr2_3:34244380-34244399 | None:intergenic | 45.0% |
| GGATTGCTGCTCCTTGTTAA+TGG | + | chr2_3:34244476-34244495 | None:intergenic | 45.0% | |
| TTAACAAGGAGCAGCAATCC+AGG | - | chr2_3:34244476-34244495 | Msa0288680:intron | 45.0% | |
| GTATTCTTTCCACCTTGTCG+AGG | + | chr2_3:34244512-34244531 | None:intergenic | 45.0% | |
| !! | TGTAATTGGTGGTGATGCCT+TGG | - | chr2_3:34244610-34244629 | Msa0288680:intron | 45.0% |
| !! | GTAATTGGTGGTGATGCCTT+GGG | - | chr2_3:34244611-34244630 | Msa0288680:intron | 45.0% |
| !! | GACATTGGTGCTGAAACAGA+AGG | + | chr2_3:34244716-34244735 | None:intergenic | 45.0% |
| TCTGTTGCACTCCTAGATTG+AGG | + | chr2_3:34244772-34244791 | None:intergenic | 45.0% | |
| ATGTTTGCAGGGTGATGAGA+TGG | - | chr2_3:34245135-34245154 | Msa0288680:intron | 45.0% | |
| TCAAGAACTGAGACTGGACT+TGG | + | chr2_3:34245187-34245206 | None:intergenic | 45.0% | |
| GAAGACTCAAGAACTGAGAC+TGG | + | chr2_3:34245193-34245212 | None:intergenic | 45.0% | |
| GCGGATGTTACCAGTATAGA+AGG | - | chr2_3:34245247-34245266 | Msa0288680:intron | 45.0% | |
| AACTCTGCATCGGATTCAGT+TGG | + | chr2_3:34245431-34245450 | None:intergenic | 45.0% | |
| TGAGTCGGATAACTCTGCAT+CGG | + | chr2_3:34245441-34245460 | None:intergenic | 45.0% | |
| CTCTCATCTCTTCAACCAGT+TGG | - | chr2_3:34245634-34245653 | Msa0288680:intron | 45.0% | |
| AACCAGTTGGAAAGCCGAAA+AGG | - | chr2_3:34245647-34245666 | Msa0288680:intron | 45.0% | |
| ! | CGCTCTTGAAACCTCCTTTT+CGG | + | chr2_3:34245664-34245683 | None:intergenic | 45.0% |
| !! | GGTTGATGAGCTTGTGGATA+AGG | - | chr2_3:34245877-34245896 | Msa0288680:intron | 45.0% |
| ATGTGACATGAAGAGGCTTG+AGG | + | chr2_3:34246128-34246147 | None:intergenic | 45.0% | |
| GAAAAAGTAGGAGGGATGGA+AGG | + | chr2_3:34246273-34246292 | None:intergenic | 45.0% | |
| AGTGGAGGATGAGTGATTCT+AGG | + | chr2_3:34246432-34246451 | None:intergenic | 45.0% | |
| GAAAGGATCAGAGAGACTGA+AGG | + | chr2_3:34246531-34246550 | None:intergenic | 45.0% | |
| ! | GATGCATTTGCTGAGTTAGC+AGG | - | chr2_3:34246819-34246838 | Msa0288680:intron | 45.0% |
| ATAGTATGAAGCACGGACAC+CGG | - | chr2_3:34248821-34248840 | Msa0288680:intron | 45.0% | |
| ! | ATTAGTTGTGTCGGTGTGTC+CGG | + | chr2_3:34248843-34248862 | None:intergenic | 45.0% |
| CATGTTCGCATTAACCCGTA+TGG | - | chr2_3:34249372-34249391 | Msa0288680:CDS | 45.0% | |
| ACCTGCCAAAATTGCCATAC+GGG | + | chr2_3:34249389-34249408 | None:intergenic | 45.0% | |
| CACCTGCCAAAATTGCCATA+CGG | + | chr2_3:34249390-34249409 | None:intergenic | 45.0% | |
| CAGACAAATAGGTGAGGTTG+AGG | + | chr2_3:34249795-34249814 | None:intergenic | 45.0% | |
| ! | TGTGCACAACTTTTGCTTGG+GGG | - | chr2_3:34250369-34250388 | Msa0288680:CDS | 45.0% |
| TGTCAATGGAGAGACCTAAG+AGG | - | chr2_3:34250494-34250513 | Msa0288680:CDS | 45.0% | |
| AGCGCATTTGGCATCATCGA+CGG | - | chr2_3:34243562-34243581 | Msa0288680:CDS | 50.0% | |
| CATCATCGACGGTCTCACTA+AGG | - | chr2_3:34243573-34243592 | Msa0288680:CDS | 50.0% | |
| ! | AAGGTGGACTCTTCGCAGAA+AGG | - | chr2_3:34243614-34243633 | Msa0288680:CDS | 50.0% |
| CAAAAGCTGGAACGGAACAG+CGG | - | chr2_3:34243790-34243809 | Msa0288680:intron | 50.0% | |
| ! | AGGGAAGGTTTGAGTTCGAC+CGG | - | chr2_3:34243917-34243936 | Msa0288680:intron | 50.0% |
| GACCGGTGGCAGAAATTTGA+TGG | - | chr2_3:34243934-34243953 | Msa0288680:intron | 50.0% | |
| GCCCATCAAATTTCTGCCAC+CGG | + | chr2_3:34243939-34243958 | None:intergenic | 50.0% | |
| ! | CCTTGCGAGTTGGAAACCAA+TGG | + | chr2_3:34244128-34244147 | None:intergenic | 50.0% |
| !! | CCATTGGTTTCCAACTCGCA+AGG | - | chr2_3:34244125-34244144 | Msa0288680:intron | 50.0% |
| GCTTCTATGCCGTCCATAAG+AGG | + | chr2_3:34244174-34244193 | None:intergenic | 50.0% | |
| ATCGAAAAAGTCAGCCGTGG+AGG | - | chr2_3:34244229-34244248 | Msa0288680:intron | 50.0% | |
| ! | TTCGCTATCGGTTACCTCCA+CGG | + | chr2_3:34244246-34244265 | None:intergenic | 50.0% |
| ! | CTGAGACTGGACTTGGTTGT+CGG | + | chr2_3:34245180-34245199 | None:intergenic | 50.0% |
| AGTTCACAACCTCGCGAGAT+CGG | + | chr2_3:34245616-34245635 | None:intergenic | 50.0% | |
| ! | CTCCTTTTCGGCTTTCCAAC+TGG | + | chr2_3:34245652-34245671 | None:intergenic | 50.0% |
| CAGTTGGAAAGCCGAAAAGG+AGG | - | chr2_3:34245650-34245669 | Msa0288680:intron | 50.0% | |
| TCAAGAGCGACGATGAATCG+AGG | - | chr2_3:34245675-34245694 | Msa0288680:intron | 50.0% | |
| GGCTTGAGGATGTGACACAT+TGG | + | chr2_3:34246114-34246133 | None:intergenic | 50.0% | |
| ! | CTTGCTGAGTTGAACCAACC+TGG | - | chr2_3:34248574-34248593 | Msa0288680:CDS | 50.0% |
| ACACGACACGTGTTTGACAC+CGG | - | chr2_3:34248923-34248942 | Msa0288680:CDS | 50.0% | |
| CATTAAGCACGGACACTCCT+CGG | + | chr2_3:34248961-34248980 | None:intergenic | 50.0% | |
| !! | ACCCGTATGGCAATTTTGGC+AGG | - | chr2_3:34249385-34249404 | Msa0288680:CDS | 50.0% |
| ! | CGCTTTAGCCTTTGCTTGGG+AGG | + | chr2_3:34243546-34243565 | None:intergenic | 55.0% |
| GACTCGGCTGACCTTTGAGT+AGG | + | chr2_3:34243734-34243753 | None:intergenic | 55.0% | |
| ! | GAAGGTTTGAGTTCGACCGG+TGG | - | chr2_3:34243920-34243939 | Msa0288680:intron | 55.0% |
| GGACGGCATAGAAGCTCAAG+TGG | - | chr2_3:34244179-34244198 | Msa0288680:intron | 55.0% | |
| CGGATCGAAAAAGTCAGCCG+TGG | - | chr2_3:34244226-34244245 | Msa0288680:intron | 55.0% | |
| ! | TGTCGAGGTGTCACAGAACC+TGG | + | chr2_3:34244497-34244516 | None:intergenic | 55.0% |
| GGTTCTGTGACACCTCGACA+AGG | - | chr2_3:34244497-34244516 | Msa0288680:intron | 55.0% | |
| TCTGTGACACCTCGACAAGG+TGG | - | chr2_3:34244500-34244519 | Msa0288680:intron | 55.0% | |
| CTGTGAATCCTCGATGAGCG+CGG | - | chr2_3:34245228-34245247 | Msa0288680:intron | 55.0% | |
| GAAGGTGGGAGAGAGAAGAG+TGG | + | chr2_3:34246450-34246469 | None:intergenic | 55.0% | |
| !! | TACAAGCGTCGGTGTCGTGT+CGG | - | chr2_3:34248894-34248913 | Msa0288680:CDS | 55.0% |
| CACGACACGTGTTTGACACC+GGG | - | chr2_3:34248924-34248943 | Msa0288680:CDS | 55.0% | |
| ! | TCCTCGGATTAGGCGTATCC+CGG | + | chr2_3:34248945-34248964 | None:intergenic | 55.0% |
| ACCTGGGTCCTCCCAAGCAA+AGG | - | chr2_3:34243535-34243554 | Msa0288680:CDS | 60.0% | |
| GGTAACATCCGCGCTCATCG+AGG | + | chr2_3:34245239-34245258 | None:intergenic | 60.0% | |
| TTCACTTGGCCGATCTCGCG+AGG | - | chr2_3:34245604-34245623 | Msa0288680:intron | 60.0% | |
| GGTGGGAGAGAGAAGAGTGG+AGG | + | chr2_3:34246447-34246466 | None:intergenic | 60.0% | |
| ACCGGGATACGCCTAATCCG+AGG | - | chr2_3:34248941-34248960 | Msa0288680:CDS | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | + | chr2_3:34248955-34248974 | None:intergenic | 60.0% | |
| GCCTTTGCTTGGGAGGACCC+AGG | + | chr2_3:34243539-34243558 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_3 | gene | 34243509 | 34250614 | 34243509 | ID=Msa0288680;Name=Msa0288680 |
| chr2_3 | mRNA | 34243509 | 34250614 | 34243509 | ID=Msa0288680-mRNA-1;Parent=Msa0288680;Name=Msa0288680-mRNA-1;_AED=0.21;_eAED=0.21;_QI=0|0.16|0.28|1|0.5|0.71|7|20|727 |
| chr2_3 | exon | 34243509 | 34243680 | 34243509 | ID=Msa0288680-mRNA-1:exon:11198;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34246167 | 34246179 | 34246167 | ID=Msa0288680-mRNA-1:exon:11197;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34246762 | 34246800 | 34246762 | ID=Msa0288680-mRNA-1:exon:11196;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34248186 | 34248763 | 34248186 | ID=Msa0288680-mRNA-1:exon:11195;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34248855 | 34248978 | 34248855 | ID=Msa0288680-mRNA-1:exon:11194;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34249225 | 34250109 | 34249225 | ID=Msa0288680-mRNA-1:exon:11193;Parent=Msa0288680-mRNA-1 |
| chr2_3 | exon | 34250222 | 34250614 | 34250222 | ID=Msa0288680-mRNA-1:exon:11192;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34250222 | 34250614 | 34250222 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34249225 | 34250109 | 34249225 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34248855 | 34248978 | 34248855 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34248186 | 34248763 | 34248186 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34246762 | 34246800 | 34246762 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34246167 | 34246179 | 34246167 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | CDS | 34243529 | 34243680 | 34243529 | ID=Msa0288680-mRNA-1:cds;Parent=Msa0288680-mRNA-1 |
| chr2_3 | three_prime_UTR | 34243509 | 34243528 | 34243509 | ID=Msa0288680-mRNA-1:three_prime_utr;Parent=Msa0288680-mRNA-1 |
| Gene Sequence |
| Protein sequence |
