Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407910 | XP_024634879.1 | 85.084 | 476 | 65 | 2 | 1 | 474 | 309 | 780 | 0.0 | 835 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407910 | A0A396IRE0 | 91.117 | 349 | 27 | 1 | 126 | 474 | 1 | 345 | 0.0 | 659 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004880 | Msa0407910 | 0.803675 | 3.112281e-49 | -8.615850e-47 |
Msa0017510 | Msa0407910 | 0.847114 | 1.419390e-59 | -8.615850e-47 |
Msa0029880 | Msa0407910 | 0.800312 | 1.529023e-48 | -8.615850e-47 |
Msa0101810 | Msa0407910 | -0.843036 | 1.793812e-58 | -8.615850e-47 |
Msa0110970 | Msa0407910 | 0.809791 | 1.588750e-50 | -8.615850e-47 |
Msa0112750 | Msa0407910 | 0.810157 | 1.325224e-50 | -8.615850e-47 |
Msa0125090 | Msa0407910 | 0.805310 | 1.419595e-49 | -8.615850e-47 |
Msa0140780 | Msa0407910 | 0.818675 | 1.731866e-52 | -8.615850e-47 |
Msa0142200 | Msa0407910 | 0.807653 | 4.551529e-50 | -8.615850e-47 |
Msa0152430 | Msa0407910 | 0.814811 | 1.274129e-51 | -8.615850e-47 |
Msa0157290 | Msa0407910 | 0.847245 | 1.306513e-59 | -8.615850e-47 |
Msa0169860 | Msa0407910 | 0.807348 | 5.280675e-50 | -8.615850e-47 |
Msa0197930 | Msa0407910 | 0.805946 | 1.044414e-49 | -8.615850e-47 |
Msa0200260 | Msa0407910 | 0.810012 | 1.424243e-50 | -8.615850e-47 |
Msa0201250 | Msa0407910 | 0.800677 | 1.288520e-48 | -8.615850e-47 |
Msa0202950 | Msa0407910 | 0.800786 | 1.223933e-48 | -8.615850e-47 |
Msa0217400 | Msa0407910 | 0.802632 | 5.115933e-49 | -8.615850e-47 |
Msa0220580 | Msa0407910 | 0.801894 | 7.260569e-49 | -8.615850e-47 |
Msa0227470 | Msa0407910 | 0.831353 | 1.751729e-55 | -8.615850e-47 |
Msa0392420 | Msa0407910 | 0.800392 | 1.472393e-48 | -8.615850e-47 |
Msa0407780 | Msa0407910 | 0.815576 | 8.613416e-52 | -8.615850e-47 |
Msa0407880 | Msa0407910 | 0.944143 | 3.349845e-103 | -8.615850e-47 |
Msa0407900 | Msa0407910 | 0.947585 | 5.055089e-106 | -8.615850e-47 |
Msa0407910 | Msa0407920 | 0.901557 | 2.376438e-78 | -8.615850e-47 |
Msa0407910 | Msa0452920 | 0.819235 | 1.291750e-52 | -8.615850e-47 |
Msa0407910 | Msa0461730 | 0.813840 | 2.088083e-51 | -8.615850e-47 |
Msa0407910 | Msa0484780 | 0.817736 | 2.825563e-52 | -8.615850e-47 |
Msa0407910 | Msa0487570 | 0.801804 | 7.575587e-49 | -8.615850e-47 |
Msa0407910 | Msa0487630 | 0.800941 | 1.137829e-48 | -8.615850e-47 |
Msa0407910 | Msa0491040 | 0.801158 | 1.027541e-48 | -8.615850e-47 |
Msa0407910 | Msa0503580 | 0.805162 | 1.525081e-49 | -8.615850e-47 |
Msa0407910 | Msa0509610 | 0.813716 | 2.223780e-51 | -8.615850e-47 |
Msa0407910 | Msa0512900 | 0.815139 | 1.077439e-51 | -8.615850e-47 |
Msa0407910 | Msa0536220 | 0.803461 | 3.447936e-49 | -8.615850e-47 |
Msa0407910 | Msa0614250 | 0.803851 | 2.861336e-49 | -8.615850e-47 |
Msa0407910 | Msa0641360 | 0.800374 | 1.484981e-48 | -8.615850e-47 |
Msa0407910 | Msa0647130 | 0.822737 | 2.018419e-53 | -8.615850e-47 |
Msa0407910 | Msa0657970 | 0.842707 | 2.194346e-58 | -8.615850e-47 |
Msa0407910 | Msa0777930 | 0.810256 | 1.261499e-50 | -8.615850e-47 |
Msa0407910 | Msa0832370 | 0.811993 | 5.302227e-51 | -8.615850e-47 |
Msa0407910 | Msa0833220 | 0.802188 | 6.316497e-49 | -8.615850e-47 |
Msa0407910 | Msa0858840 | 0.828472 | 8.819522e-55 | -8.615850e-47 |
Msa0407910 | Msa0867890 | 0.811442 | 6.985908e-51 | -8.615850e-47 |
Msa0407910 | Msa0870530 | 0.806199 | 9.239070e-50 | -8.615850e-47 |
Msa0407910 | Msa0880140 | 0.849809 | 2.548093e-60 | -8.615850e-47 |
Msa0407910 | Msa0903700 | 0.803072 | 4.151032e-49 | -8.615850e-47 |
Msa0407910 | Msa0908050 | 0.812245 | 4.672433e-51 | -8.615850e-47 |
Msa0407910 | Msa0909120 | 0.813447 | 2.548547e-51 | -8.615850e-47 |
Msa0407910 | Msa1044420 | 0.805520 | 1.283340e-49 | -8.615850e-47 |
Msa0407910 | Msa1069100 | 0.804332 | 2.272382e-49 | -8.615850e-47 |
Msa0407910 | Msa1075220 | -0.801303 | 9.595624e-49 | -8.615850e-47 |
Msa0407910 | Msa1082500 | 0.827586 | 1.441809e-54 | -8.615850e-47 |
Msa0407910 | Msa1098560 | 0.834972 | 2.200175e-56 | -8.615850e-47 |
Msa0407910 | Msa1151910 | 0.801727 | 7.854992e-49 | -8.615850e-47 |
Msa0407910 | Msa1179460 | 0.840461 | 8.576165e-58 | -8.615850e-47 |
Msa0407910 | Msa1242230 | 0.808289 | 3.332224e-50 | -8.615850e-47 |
Msa0407910 | Msa1267960 | 0.808953 | 2.403454e-50 | -8.615850e-47 |
Msa0407910 | Msa1270610 | 0.800685 | 1.283403e-48 | -8.615850e-47 |
Msa0407910 | Msa1271290 | 0.812489 | 4.132104e-51 | -8.615850e-47 |
Msa0407910 | Msa1271300 | 0.823718 | 1.191274e-53 | -8.615850e-47 |
Msa0407910 | Msa1278840 | 0.812965 | 3.250803e-51 | -8.615850e-47 |
Msa0407910 | Msa1283860 | 0.810488 | 1.124303e-50 | -8.615850e-47 |
Msa0407910 | Msa1289280 | 0.814424 | 1.552023e-51 | -8.615850e-47 |
Msa0407910 | Msa1293770 | 0.800696 | 1.276781e-48 | -8.615850e-47 |
Msa0407910 | Msa1300490 | 0.812998 | 3.197871e-51 | -8.615850e-47 |
Msa0407910 | Msa1318240 | 0.815526 | 8.836002e-52 | -8.615850e-47 |
Msa0407910 | Msa1322860 | 0.810946 | 8.950547e-51 | -8.615850e-47 |
Msa0407910 | Msa1322890 | 0.800125 | 1.668566e-48 | -8.615850e-47 |
Msa0407910 | Msa1374550 | 0.812401 | 4.318080e-51 | -8.615850e-47 |
Msa0407910 | Msa1423880 | 0.802571 | 5.267169e-49 | -8.615850e-47 |
Msa0407910 | Msa1430240 | 0.803974 | 2.698007e-49 | -8.615850e-47 |
Msa0407910 | Msa1438250 | 0.832828 | 7.563456e-56 | -8.615850e-47 |
Msa0243100 | Msa0407910 | 0.831827 | 1.338807e-55 | -8.615850e-47 |
Msa0257250 | Msa0407910 | 0.803507 | 3.373642e-49 | -8.615850e-47 |
Msa0258760 | Msa0407910 | 0.808431 | 3.108419e-50 | -8.615850e-47 |
Msa0261340 | Msa0407910 | 0.808617 | 2.835932e-50 | -8.615850e-47 |
Msa0287650 | Msa0407910 | 0.829455 | 5.099161e-55 | -8.615850e-47 |
Msa0332000 | Msa0407910 | 0.802101 | 6.581663e-49 | -8.615850e-47 |
Msa0349080 | Msa0407910 | 0.806578 | 7.684350e-50 | -8.615850e-47 |
Msa0362680 | Msa0407910 | 0.812900 | 3.358688e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407910 | MtrunA17_Chr3g0098481 | 91.117 | 349 | 27 | 1 | 126 | 474 | 1 | 345 | 0.0 | 659 |
Msa0407910 | MtrunA17_Chr3g0098301 | 66.423 | 411 | 122 | 3 | 59 | 467 | 10 | 406 | 0.0 | 537 |
Msa0407910 | MtrunA17_Chr3g0098531 | 69.799 | 298 | 89 | 1 | 177 | 474 | 1 | 297 | 5.01e-158 | 449 |
Msa0407910 | MtrunA17_Chr3g0102001 | 55.380 | 316 | 130 | 4 | 161 | 471 | 437 | 746 | 2.60e-105 | 330 |
Msa0407910 | MtrunA17_Chr5g0439061 | 56.369 | 314 | 131 | 3 | 163 | 474 | 435 | 744 | 3.08e-105 | 329 |
Msa0407910 | MtrunA17_Chr2g0286601 | 46.078 | 306 | 157 | 4 | 166 | 470 | 391 | 689 | 2.86e-77 | 254 |
Msa0407910 | MtrunA17_Chr5g0439051 | 61.463 | 205 | 77 | 1 | 270 | 474 | 20 | 222 | 4.71e-77 | 240 |
Msa0407910 | MtrunA17_Chr2g0286551 | 44.062 | 320 | 170 | 4 | 151 | 470 | 358 | 668 | 4.07e-70 | 235 |
Msa0407910 | MtrunA17_Chr5g0439081 | 55.102 | 196 | 85 | 2 | 270 | 465 | 16 | 208 | 3.80e-67 | 214 |
Msa0407910 | MtrunA17_Chr3g0098511 | 85.294 | 102 | 15 | 0 | 373 | 474 | 1 | 102 | 1.79e-59 | 190 |
Msa0407910 | MtrunA17_Chr2g0286561 | 46.948 | 213 | 108 | 3 | 260 | 470 | 5 | 214 | 9.92e-54 | 179 |
Msa0407910 | MtrunA17_Chr5g0443001 | 36.913 | 298 | 173 | 8 | 168 | 461 | 316 | 602 | 3.10e-45 | 166 |
Msa0407910 | MtrunA17_Chr2g0297701 | 33.333 | 291 | 187 | 4 | 168 | 457 | 282 | 566 | 1.03e-43 | 162 |
Msa0407910 | MtrunA17_Chr5g0410171 | 32.550 | 298 | 195 | 3 | 164 | 460 | 439 | 731 | 3.26e-43 | 162 |
Msa0407910 | MtrunA17_Chr2g0297491 | 32.353 | 306 | 191 | 5 | 168 | 467 | 91 | 386 | 1.39e-41 | 152 |
Msa0407910 | MtrunA17_Chr5g0410271 | 30.000 | 340 | 217 | 5 | 122 | 460 | 5 | 324 | 1.47e-41 | 150 |
Msa0407910 | MtrunA17_Chr6g0457101 | 32.130 | 277 | 182 | 3 | 146 | 421 | 378 | 649 | 7.94e-41 | 155 |
Msa0407910 | MtrunA17_Chr5g0410201 | 30.117 | 342 | 218 | 5 | 120 | 460 | 4 | 325 | 9.04e-41 | 149 |
Msa0407910 | MtrunA17_Chr6g0456101 | 33.555 | 301 | 180 | 5 | 122 | 421 | 421 | 702 | 6.44e-40 | 153 |
Msa0407910 | MtrunA17_Chr6g0456141 | 31.229 | 301 | 187 | 5 | 122 | 421 | 64 | 345 | 7.16e-40 | 148 |
Msa0407910 | MtrunA17_Chr5g0410341 | 31.148 | 305 | 190 | 4 | 164 | 460 | 451 | 743 | 1.22e-39 | 152 |
Msa0407910 | MtrunA17_Chr2g0297681 | 31.126 | 302 | 201 | 5 | 168 | 467 | 402 | 698 | 2.66e-39 | 151 |
Msa0407910 | MtrunA17_Chr3g0100301 | 39.234 | 209 | 120 | 4 | 246 | 451 | 196 | 400 | 7.46e-39 | 145 |
Msa0407910 | MtrunA17_Chr2g0297691 | 30.492 | 305 | 199 | 6 | 168 | 467 | 404 | 700 | 6.06e-38 | 147 |
Msa0407910 | MtrunA17_Chr2g0297481 | 31.908 | 304 | 177 | 9 | 168 | 461 | 189 | 472 | 1.42e-37 | 143 |
Msa0407910 | MtrunA17_Chr5g0410371 | 32.166 | 314 | 197 | 7 | 166 | 474 | 2 | 304 | 2.83e-37 | 138 |
Msa0407910 | MtrunA17_Chr2g0297711 | 31.507 | 292 | 190 | 6 | 171 | 461 | 245 | 527 | 3.56e-36 | 140 |
Msa0407910 | MtrunA17_Chr3g0100741 | 32.759 | 290 | 180 | 8 | 166 | 451 | 309 | 587 | 4.84e-36 | 140 |
Msa0407910 | MtrunA17_Chr2g0284501 | 35.075 | 268 | 162 | 5 | 188 | 454 | 392 | 648 | 6.63e-36 | 141 |
Msa0407910 | MtrunA17_Chr2g0297651 | 31.373 | 306 | 188 | 9 | 168 | 464 | 404 | 696 | 4.57e-35 | 139 |
Msa0407910 | MtrunA17_Chr5g0410461 | 30.380 | 316 | 212 | 5 | 157 | 469 | 160 | 470 | 1.02e-34 | 135 |
Msa0407910 | MtrunA17_Chr2g0284541 | 33.754 | 317 | 192 | 5 | 163 | 473 | 351 | 655 | 1.90e-34 | 136 |
Msa0407910 | MtrunA17_Chr5g0410581 | 30.072 | 276 | 189 | 3 | 157 | 431 | 491 | 763 | 8.73e-34 | 135 |
Msa0407910 | MtrunA17_Chr3g0096941 | 32.292 | 288 | 180 | 8 | 168 | 451 | 312 | 588 | 2.41e-31 | 127 |
Msa0407910 | MtrunA17_Chr5g0410191 | 34.066 | 182 | 116 | 3 | 280 | 460 | 12 | 190 | 3.52e-29 | 113 |
Msa0407910 | MtrunA17_Chr5g0410541 | 36.806 | 144 | 91 | 0 | 285 | 428 | 38 | 181 | 1.90e-24 | 101 |
Msa0407910 | MtrunA17_Chr5g0439041 | 45.133 | 113 | 56 | 2 | 162 | 270 | 58 | 168 | 1.05e-22 | 95.9 |
Msa0407910 | MtrunA17_Chr5g0410451 | 31.928 | 166 | 112 | 1 | 264 | 428 | 35 | 200 | 3.96e-21 | 92.4 |
Msa0407910 | MtrunA17_Chr5g0410511 | 30.556 | 180 | 124 | 1 | 272 | 450 | 4 | 183 | 1.08e-18 | 84.3 |
Msa0407910 | MtrunA17_Chr2g0297611 | 36.667 | 90 | 56 | 1 | 275 | 364 | 1 | 89 | 3.41e-16 | 73.9 |
Msa0407910 | MtrunA17_Chr5g0410181 | 31.579 | 133 | 87 | 2 | 329 | 460 | 2 | 131 | 3.75e-16 | 75.1 |
Msa0407910 | MtrunA17_Chr1g0211531 | 24.510 | 306 | 206 | 8 | 164 | 457 | 239 | 531 | 8.04e-14 | 73.6 |
Msa0407910 | MtrunA17_Chr1g0211511 | 24.735 | 283 | 194 | 8 | 164 | 439 | 16 | 286 | 1.27e-12 | 68.9 |
Msa0407910 | MtrunA17_Chr1g0211541 | 25.114 | 219 | 151 | 5 | 164 | 378 | 218 | 427 | 2.03e-12 | 69.3 |
Msa0407910 | MtrunA17_Chr2g0297521 | 32.143 | 84 | 57 | 0 | 262 | 345 | 1 | 84 | 3.58e-12 | 62.4 |
Msa0407910 | MtrunA17_Chr3g0100921 | 30.597 | 134 | 90 | 2 | 319 | 451 | 2 | 133 | 2.29e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0407910 | AT3G18670.1 | 30.411 | 365 | 240 | 8 | 105 | 461 | 226 | 584 | 1.04e-50 | 182 |
Msa0407910 | AT3G18670.2 | 31.627 | 332 | 219 | 6 | 132 | 461 | 314 | 639 | 2.49e-49 | 179 |
Msa0407910 | AT5G35810.1 | 32.026 | 306 | 197 | 5 | 159 | 458 | 29 | 329 | 1.25e-43 | 157 |
Msa0407910 | AT5G04700.1 | 33.739 | 329 | 208 | 8 | 138 | 463 | 337 | 658 | 7.23e-43 | 161 |
Msa0407910 | AT5G04690.1 | 34.043 | 235 | 147 | 3 | 231 | 463 | 386 | 614 | 1.51e-41 | 157 |
Msa0407910 | AT5G04690.3 | 34.043 | 235 | 147 | 3 | 231 | 463 | 406 | 634 | 1.97e-41 | 157 |
Msa0407910 | AT5G04690.2 | 34.043 | 235 | 147 | 3 | 231 | 463 | 420 | 648 | 2.64e-41 | 156 |
Msa0407910 | AT3G54065.1 | 35.211 | 213 | 129 | 3 | 256 | 461 | 8 | 218 | 1.77e-37 | 137 |
Msa0407910 | AT5G04730.1 | 30.000 | 330 | 210 | 8 | 142 | 463 | 275 | 591 | 2.79e-37 | 144 |
Msa0407910 | AT5G04680.2 | 31.304 | 345 | 216 | 8 | 132 | 463 | 194 | 530 | 5.47e-36 | 140 |
Msa0407910 | AT5G04680.3 | 31.304 | 345 | 216 | 8 | 132 | 463 | 303 | 639 | 5.66e-36 | 141 |
Msa0407910 | AT5G04680.4 | 31.304 | 345 | 216 | 8 | 132 | 463 | 317 | 653 | 7.79e-36 | 141 |
Msa0407910 | AT5G04680.1 | 31.304 | 345 | 216 | 8 | 132 | 463 | 346 | 682 | 1.15e-35 | 140 |
Find 102 sgRNAs with CRISPR-Local
Find 694 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGCTCTTGGAAGCATTTA+TGG | 0.101845 | 3_2:+47121636 | Msa0407910:CDS |
ACTCTATTTGTATCATTATA+AGG | 0.224560 | 3_2:+47123861 | Msa0407910:three_prime_UTR |
AGAATTAGCAGCAAAGAAAA+AGG | 0.251172 | 3_2:+47122371 | Msa0407910:CDS |
TGCCGAAAGTCATCAAAATA+AGG | 0.251746 | 3_2:+47113158 | Msa0407910:five_prime_UTR |
TGCTTGCCTCTCACATTCTA+TGG | 0.260173 | 3_2:+47123596 | Msa0407910:CDS |
AACCCCAGGTGAAATCTTTA+AGG | 0.271604 | 3_2:+47123148 | Msa0407910:CDS |
ATGTTCATTTCTTTCATTGC+TGG | 0.288747 | 3_2:+47123506 | Msa0407910:CDS |
AAGTGGCGTAGTTGAAATTA+TGG | 0.312736 | 3_2:+47122275 | Msa0407910:CDS |
AATTCATCAACATTGTATAA+TGG | 0.327435 | 3_2:-47120932 | None:intergenic |
CTTCTTTGTTGCTTCTATGA+TGG | 0.336687 | 3_2:-47123121 | None:intergenic |
CCTGTTTCCTGATTGCCTCC+AGG | 0.337339 | 3_2:-47123287 | None:intergenic |
GATCAAGATATAACGGAAAC+TGG | 0.338760 | 3_2:-47123625 | None:intergenic |
TTCAAGTGCACGCATGATTT+CGG | 0.351916 | 3_2:-47122439 | None:intergenic |
CATTGTCAGAGTTAGTTTCA+TGG | 0.358694 | 3_2:-47122482 | None:intergenic |
TTTGCTGTATCTTCATTAGT+TGG | 0.362700 | 3_2:+47123347 | Msa0407910:CDS |
CCTGGAGGCAATCAGGAAAC+AGG | 0.362749 | 3_2:+47123287 | Msa0407910:CDS |
AACACTGCTTGGAGGATATC+TGG | 0.368356 | 3_2:+47122666 | Msa0407910:CDS |
AAATGTTTGTATTTACCATA+TGG | 0.371774 | 3_2:+47121029 | Msa0407910:exon |
GAATTATATGAAGTTTCTAT+TGG | 0.375458 | 3_2:+47123892 | Msa0407910:three_prime_UTR |
CGCAAGTTGTTGAGGGGTTG+TGG | 0.380881 | 3_2:+47122541 | Msa0407910:CDS |
TGTTGCTTCTATGATGGTAA+TGG | 0.392154 | 3_2:-47123115 | None:intergenic |
AGCTTAACACCCTTGATACT+TGG | 0.393569 | 3_2:-47123680 | None:intergenic |
AAATGCTGCTAAGTGTAAAA+TGG | 0.394125 | 3_2:-47122625 | None:intergenic |
GTTTATTATGTTTAGAGTAC+TGG | 0.399543 | 3_2:+47123818 | Msa0407910:three_prime_UTR |
CTGTTTCCTGATTGCCTCCA+GGG | 0.400780 | 3_2:-47123286 | None:intergenic |
CTTATTACTTGTAGCAATGA+AGG | 0.409492 | 3_2:+47122338 | Msa0407910:CDS |
TCCTCCTTAAAGATTTCACC+TGG | 0.410908 | 3_2:-47123152 | None:intergenic |
GTTGTGGAAGAGGCTTTCTA+TGG | 0.418288 | 3_2:+47122557 | Msa0407910:CDS |
CAACGTCCCTGGAGGCAATC+AGG | 0.419195 | 3_2:+47123280 | Msa0407910:CDS |
GGCGTCTCCTTTGCTACATC+AGG | 0.434602 | 3_2:+47123257 | Msa0407910:CDS |
TTGTTGAGGGGTTGTGGAAG+AGG | 0.439045 | 3_2:+47122547 | Msa0407910:CDS |
CATATTCGGTAGCCAGCTCT+TGG | 0.441519 | 3_2:+47121624 | Msa0407910:CDS |
CTTCTATGATGGTAATGGTC+TGG | 0.452731 | 3_2:-47123110 | None:intergenic |
GGGGCTGATCCCTTGGATTA+CGG | 0.453441 | 3_2:+47121688 | Msa0407910:CDS |
GCCGAAAGTCATCAAAATAA+GGG | 0.454852 | 3_2:+47113159 | Msa0407910:five_prime_UTR |
GTTAAGAAGAAGCACATATT+CGG | 0.460043 | 3_2:+47121610 | Msa0407910:CDS |
CCATAAATGCTTCCAAGAGC+TGG | 0.469944 | 3_2:-47121636 | None:intergenic |
ACAGGGAAACCAACATTTGA+AGG | 0.475667 | 3_2:+47123305 | Msa0407910:CDS |
TGAAAATAGGGTATGCCATA+TGG | 0.476107 | 3_2:-47121044 | None:intergenic |
GTGTGGTGGGGCTGATCCCT+TGG | 0.478750 | 3_2:+47121681 | Msa0407910:CDS |
AACCTTAGGGGCAATGAAGA+TGG | 0.479996 | 3_2:+47121588 | Msa0407910:intron |
GAAGGGCAACCAGCATTTGA+AGG | 0.483339 | 3_2:+47123323 | Msa0407910:CDS |
TTCTAGAAGTGAGTATAGAA+AGG | 0.492529 | 3_2:-47123403 | None:intergenic |
ATAGAACAAGATACCACTCT+TGG | 0.493665 | 3_2:-47123558 | None:intergenic |
CTCCTTAAAGATTTCACCTG+GGG | 0.497170 | 3_2:-47123150 | None:intergenic |
GCTACATCAGGCAACGTCCC+TGG | 0.497506 | 3_2:+47123269 | Msa0407910:CDS |
GTTGTAGCAGCACTCGTCGC+AGG | 0.505518 | 3_2:+47123236 | Msa0407910:CDS |
GTAAAGGAATCTGACAAGAA+AGG | 0.508579 | 3_2:+47122315 | Msa0407910:CDS |
GGTGCCACCACCAAGTATCA+AGG | 0.511463 | 3_2:+47123670 | Msa0407910:CDS |
TTGAGAAGATCAAGATATAA+CGG | 0.512499 | 3_2:-47123632 | None:intergenic |
CCACACATGTATGACTCATA+AGG | 0.512671 | 3_2:-47121664 | None:intergenic |
TTGATCTTCTCAAAGTTACA+TGG | 0.512948 | 3_2:+47123642 | Msa0407910:CDS |
AGAAATGAACATGGCAACAA+TGG | 0.515982 | 3_2:-47123495 | None:intergenic |
ACAGCAAATCCTTCAAATGC+TGG | 0.519658 | 3_2:-47123332 | None:intergenic |
AGAGCTTAACTCAAAAGTAA+AGG | 0.520218 | 3_2:+47122299 | Msa0407910:CDS |
TTAACACCCTTGATACTTGG+TGG | 0.523933 | 3_2:-47123677 | None:intergenic |
GCTGGTTGCCCTTCAAATGT+TGG | 0.529783 | 3_2:-47123314 | None:intergenic |
ATGAGTCATACATGTGTGGT+GGG | 0.531314 | 3_2:+47121668 | Msa0407910:CDS |
CACAACCCCTCAACAACTTG+CGG | 0.534637 | 3_2:-47122540 | None:intergenic |
TTGAAAGTGTCATGCACGAA+AGG | 0.536960 | 3_2:+47121749 | Msa0407910:CDS |
TTGTTGATTTATGCTCTGAA+AGG | 0.537416 | 3_2:-47122583 | None:intergenic |
AGACAACCGCAAGTTGTTGA+GGG | 0.537910 | 3_2:+47122534 | Msa0407910:CDS |
CACACAGCGAAAACACTGCT+TGG | 0.538738 | 3_2:+47122655 | Msa0407910:CDS |
GAATGTGAGAGGCAAGCAAA+TGG | 0.539059 | 3_2:-47123591 | None:intergenic |
CATCATAGAAGCAACAAAGA+AGG | 0.547820 | 3_2:+47123122 | Msa0407910:CDS |
ATCATGTTCTCCGTAATCCA+AGG | 0.551531 | 3_2:-47121698 | None:intergenic |
TAGACAACCGCAAGTTGTTG+AGG | 0.558579 | 3_2:+47122533 | Msa0407910:CDS |
ATGGTCTACTCAGTCATCGT+GGG | 0.560174 | 3_2:+47121081 | Msa0407910:CDS |
GATGTCCCACATCATTTGCA+TGG | 0.565189 | 3_2:-47122694 | None:intergenic |
CCTCCTTAAAGATTTCACCT+GGG | 0.568420 | 3_2:-47123151 | None:intergenic |
ACAGCGAAAACACTGCTTGG+AGG | 0.577281 | 3_2:+47122658 | Msa0407910:CDS |
GAAGGAAATCAAGAAATGAA+AGG | 0.582757 | 3_2:+47122204 | Msa0407910:CDS |
TATGAGTCATACATGTGTGG+TGG | 0.583051 | 3_2:+47121667 | Msa0407910:CDS |
TATTTGCGTGCAGCAAAACA+TGG | 0.589012 | 3_2:+47122411 | Msa0407910:CDS |
GACGTTGCCTGATGTAGCAA+AGG | 0.589787 | 3_2:-47123264 | None:intergenic |
ACACCCTTGATACTTGGTGG+TGG | 0.591476 | 3_2:-47123674 | None:intergenic |
GTGGGACATCAAGTGGTACA+AGG | 0.594742 | 3_2:+47122707 | Msa0407910:CDS |
TCAAGGGTGTTAAGCTGTAG+AGG | 0.595960 | 3_2:+47123687 | Msa0407910:CDS |
ACAGATAAATATTCCAAGAG+TGG | 0.603652 | 3_2:+47123545 | Msa0407910:CDS |
CTGGAGGCAATCAGGAAACA+GGG | 0.606342 | 3_2:+47123288 | Msa0407910:CDS |
CAGGGAAACCAACATTTGAA+GGG | 0.612015 | 3_2:+47123306 | Msa0407910:CDS |
AGTGTCATGCACGAAAGGAA+AGG | 0.614504 | 3_2:+47121754 | Msa0407910:CDS |
GTGCGGCCATGCAAATGATG+TGG | 0.618816 | 3_2:+47122688 | Msa0407910:CDS |
TCTCAAAGTTACATGGAGGA+AGG | 0.625653 | 3_2:+47123649 | Msa0407910:CDS |
TCATGTTCTCCGTAATCCAA+GGG | 0.625760 | 3_2:-47121697 | None:intergenic |
AAATCAACACAAGAGAGAGA+AGG | 0.626440 | 3_2:+47122186 | Msa0407910:CDS |
GATGGTCTACTCAGTCATCG+TGG | 0.629444 | 3_2:+47121080 | Msa0407910:CDS |
GTGCCACCACCAAGTATCAA+GGG | 0.630567 | 3_2:+47123671 | Msa0407910:CDS |
TTCTAGATAAAAGCATTGAG+TGG | 0.638047 | 3_2:+47123186 | Msa0407910:CDS |
GACAACCGCAAGTTGTTGAG+GGG | 0.642150 | 3_2:+47122535 | Msa0407910:CDS |
TGAGTCATACATGTGTGGTG+GGG | 0.648242 | 3_2:+47121669 | Msa0407910:CDS |
CCCAGGTGAAATCTTTAAGG+AGG | 0.655968 | 3_2:+47123151 | Msa0407910:CDS |
TGCGGCCATGCAAATGATGT+GGG | 0.663238 | 3_2:+47122689 | Msa0407910:CDS |
ACAACTCCATAGAATGTGAG+AGG | 0.673388 | 3_2:-47123602 | None:intergenic |
GTTGAAGACATTGCAGACCA+AGG | 0.679908 | 3_2:+47113265 | Msa0407910:five_prime_UTR |
ATCTTCTCAAAGTTACATGG+AGG | 0.681695 | 3_2:+47123645 | Msa0407910:CDS |
AAATGATGTGGGACATCAAG+TGG | 0.684085 | 3_2:+47122700 | Msa0407910:CDS |
TGGTCTACTCAGTCATCGTG+GGG | 0.689942 | 3_2:+47121082 | Msa0407910:CDS |
TGCTTGGAGGATATCTGGTG+CGG | 0.701964 | 3_2:+47122671 | Msa0407910:CDS |
AGCAATGAAAGAAATGAACA+TGG | 0.705741 | 3_2:-47123504 | None:intergenic |
ACATCAGGCAACGTCCCTGG+AGG | 0.708851 | 3_2:+47123272 | Msa0407910:CDS |
CCTTATGAGTCATACATGTG+TGG | 0.718357 | 3_2:+47121664 | Msa0407910:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATAAAATTTTGATGTTAA+AGG | + | chr3_2:47113193-47113212 | Msa0407910:five_prime_UTR | 10.0% |
!! | AATTAATTTAAGTGAAAAAT+AGG | - | chr3_2:47113382-47113401 | None:intergenic | 10.0% |
!!! | TATTTTTCACTTAAATTAAT+TGG | + | chr3_2:47113381-47113400 | Msa0407910:intron | 10.0% |
!! | GAAGAAAAATATATAAAATA+AGG | - | chr3_2:47113836-47113855 | None:intergenic | 10.0% |
!! | ATAAAAAAAATTACAAGAAA+CGG | + | chr3_2:47115901-47115920 | Msa0407910:intron | 10.0% |
!! | AATTAAAATCGAATTTAAAT+GGG | - | chr3_2:47120365-47120384 | None:intergenic | 10.0% |
!! | AAATTAAAATCGAATTTAAA+TGG | - | chr3_2:47120366-47120385 | None:intergenic | 10.0% |
!!! | TATATGATGATATATTTTTT+CGG | - | chr3_2:47120518-47120537 | None:intergenic | 10.0% |
!!! | TGCTAATTTTTAAAAAAATA+AGG | - | chr3_2:47120823-47120842 | None:intergenic | 10.0% |
!! | AATAAATCATGTAAAATTAA+AGG | - | chr3_2:47121129-47121148 | None:intergenic | 10.0% |
!! | TATGATCATTAATATATTTA+AGG | + | chr3_2:47121876-47121895 | Msa0407910:intron | 10.0% |
!! | GTTATAGATAATTAAATATA+GGG | - | chr3_2:47122072-47122091 | None:intergenic | 10.0% |
!! | AGTTATAGATAATTAAATAT+AGG | - | chr3_2:47122073-47122092 | None:intergenic | 10.0% |
!!! | AAAAAATATAAATGTTTTCT+GGG | - | chr3_2:47122966-47122985 | None:intergenic | 10.0% |
!!! | TAAAAAATATAAATGTTTTC+TGG | - | chr3_2:47122967-47122986 | None:intergenic | 10.0% |
!!! | TACAATTTAATTCTAGTTTT+TGG | - | chr3_2:47113241-47113260 | None:intergenic | 15.0% |
!!! | ATTAATTGGTTTTTTCTAAA+AGG | + | chr3_2:47113395-47113414 | Msa0407910:intron | 15.0% |
!!! | TCAAAAGTATCTTATATATA+GGG | - | chr3_2:47113551-47113570 | None:intergenic | 15.0% |
!!! | AACTTAAAACTTTTCTTTTT+TGG | - | chr3_2:47113705-47113724 | None:intergenic | 15.0% |
!! | CAAATACAATAATATTACAT+TGG | - | chr3_2:47113773-47113792 | None:intergenic | 15.0% |
!! | ACTACATAAATATAATCATA+AGG | + | chr3_2:47114057-47114076 | Msa0407910:intron | 15.0% |
!! | ATAATGATAAAACAAATGTT+TGG | + | chr3_2:47114344-47114363 | Msa0407910:intron | 15.0% |
!!! | ATTATTTTACACAAAGATAA+TGG | + | chr3_2:47114879-47114898 | Msa0407910:intron | 15.0% |
!!! | TTAAATCTGAGTTTATTTTA+CGG | + | chr3_2:47115507-47115526 | Msa0407910:intron | 15.0% |
!!! | TAGTATCATAACAATTATTT+TGG | - | chr3_2:47116552-47116571 | None:intergenic | 15.0% |
!! | AAGATTTAAAGAAAGATTAT+TGG | - | chr3_2:47117516-47117535 | None:intergenic | 15.0% |
!! | ATTAATTATACAATACTGAA+CGG | + | chr3_2:47114809-47114828 | Msa0407910:intron | 15.0% |
!! | AACAATCTTTATAATATACA+TGG | + | chr3_2:47119187-47119206 | Msa0407910:intron | 15.0% |
!! | TAACAATATTTGATCATAAA+TGG | + | chr3_2:47119217-47119236 | Msa0407910:intron | 15.0% |
!!! | AATTTTACATGATTTATTTG+TGG | + | chr3_2:47121131-47121150 | Msa0407910:intron | 15.0% |
!! | GTAAGAACAAAAAAAAAAAT+CGG | + | chr3_2:47121779-47121798 | Msa0407910:intron | 15.0% |
!! | ATATTACTTAATAACTATGT+CGG | + | chr3_2:47121808-47121827 | Msa0407910:intron | 15.0% |
!! | TAATTTATCATTTCAACATA+TGG | + | chr3_2:47122833-47122852 | Msa0407910:intron | 15.0% |
!!! | ATAGATTTTTTTTAAGAAGT+AGG | - | chr3_2:47123018-47123037 | None:intergenic | 15.0% |
!! | TATCTTATATATAGGGAAAA+AGG | - | chr3_2:47113544-47113563 | None:intergenic | 20.0% |
!!! | CTCAAAAGTATCTTATATAT+AGG | - | chr3_2:47113552-47113571 | None:intergenic | 20.0% |
!! | ATAACCCATAAAATAAATAG+GGG | - | chr3_2:47113647-47113666 | None:intergenic | 20.0% |
!! | CATAACCCATAAAATAAATA+GGG | - | chr3_2:47113648-47113667 | None:intergenic | 20.0% |
!! | ATTACTCATAAACATTTGAA+TGG | + | chr3_2:47114028-47114047 | Msa0407910:intron | 20.0% |
!!! | TGGATTAAGTCTAAAATTAA+TGG | - | chr3_2:47114087-47114106 | None:intergenic | 20.0% |
!!! | TCAAATTAATTTGAGTTGTA+AGG | + | chr3_2:47114433-47114452 | Msa0407910:intron | 20.0% |
!! | TATGTTTATGTTAAGAATAC+AGG | - | chr3_2:47115435-47115454 | None:intergenic | 20.0% |
!! | CTTAGCATAAATAAAATTCA+TGG | + | chr3_2:47115781-47115800 | Msa0407910:intron | 20.0% |
!!! | GTTCAATTTTAGCTTAATTA+AGG | - | chr3_2:47116267-47116286 | None:intergenic | 20.0% |
!! | TTGTAAGAAAATTCTATCAA+AGG | + | chr3_2:47116980-47116999 | Msa0407910:intron | 20.0% |
!! | ATTTAAAGAAAGATTATTGG+TGG | - | chr3_2:47117513-47117532 | None:intergenic | 20.0% |
!! | CTTTAAATCTTGATACAATT+TGG | + | chr3_2:47117525-47117544 | Msa0407910:intron | 20.0% |
!! | TAAAAATCTTCTGTGATTTA+CGG | - | chr3_2:47117741-47117760 | None:intergenic | 20.0% |
!! | TTTATGCTCATAGTTATATT+TGG | - | chr3_2:47118702-47118721 | None:intergenic | 20.0% |
!!! | GTTATTTTAGACAAAGATAA+TGG | + | chr3_2:47118942-47118961 | Msa0407910:intron | 20.0% |
!!! | TTATGTTAGTTTACGAAAAT+AGG | - | chr3_2:47119262-47119281 | None:intergenic | 20.0% |
!! | AGATAGTTTATCATACATTT+GGG | - | chr3_2:47119314-47119333 | None:intergenic | 20.0% |
!! | AAGATAGTTTATCATACATT+TGG | - | chr3_2:47119315-47119334 | None:intergenic | 20.0% |
!!! | GTTCAATTTTAGCTTAATTA+AGG | - | chr3_2:47116267-47116286 | None:intergenic | 20.0% |
!! | AAAATTGAACTCAAAAACTA+TGG | + | chr3_2:47119356-47119375 | Msa0407910:intron | 20.0% |
!!! | AAGTATCGTAACAATTATTT+TGG | - | chr3_2:47119631-47119650 | None:intergenic | 20.0% |
!! | TAATTAAGTTATGTTCCATA+CGG | + | chr3_2:47120300-47120319 | Msa0407910:intron | 20.0% |
!!! | TCGATTTTAATTTTAGCAAA+TGG | + | chr3_2:47120373-47120392 | Msa0407910:intron | 20.0% |
!! | AATTCATCAACATTGTATAA+TGG | - | chr3_2:47120935-47120954 | None:intergenic | 20.0% |
!!! | CAATGTTGATGAATTAAAAA+AGG | + | chr3_2:47120940-47120959 | Msa0407910:five_prime_UTR | 20.0% |
!! | AAATGTTTGTATTTACCATA+TGG | + | chr3_2:47121029-47121048 | Msa0407910:exon | 20.0% |
!! | GATGTGATCTATTAATTTAA+TGG | + | chr3_2:47121285-47121304 | Msa0407910:intron | 20.0% |
!!! | TTAATTAATTTTGCAACCTT+AGG | + | chr3_2:47121574-47121593 | Msa0407910:intron | 20.0% |
!!! | TAATTAATTTTGCAACCTTA+GGG | + | chr3_2:47121575-47121594 | Msa0407910:intron | 20.0% |
!! | ATAGAAATACACATATCAAA+AGG | + | chr3_2:47121944-47121963 | Msa0407910:intron | 20.0% |
!!! | TAAATAAAGCAATTTTGCAT+TGG | - | chr3_2:47122009-47122028 | None:intergenic | 20.0% |
!!! | AATGCAAAATTGCTTTATTT+AGG | + | chr3_2:47122008-47122027 | Msa0407910:intron | 20.0% |
!!! | TGAAAAAGATAAGACATTTT+TGG | + | chr3_2:47122242-47122261 | Msa0407910:CDS | 20.0% |
!!! | GAGATCATATGATATTTTTA+AGG | + | chr3_2:47122774-47122793 | Msa0407910:intron | 20.0% |
!! | AAAAAAGAGACTATAAAACT+AGG | + | chr3_2:47122865-47122884 | Msa0407910:intron | 20.0% |
!!! | AGTCTTTTAATATACTATAC+AGG | - | chr3_2:47123086-47123105 | None:intergenic | 20.0% |
!!! | TGTTTTATTATATTGCATTG+TGG | + | chr3_2:47123714-47123733 | Msa0407910:three_prime_UTR | 20.0% |
!! | ACTCTATTTGTATCATTATA+AGG | + | chr3_2:47123861-47123880 | Msa0407910:three_prime_UTR | 20.0% |
!! | GAATTATATGAAGTTTCTAT+TGG | + | chr3_2:47123892-47123911 | Msa0407910:three_prime_UTR | 20.0% |
! | TTCATTGAAAAAACATACCT+TGG | - | chr3_2:47113285-47113304 | None:intergenic | 25.0% |
!!! | ATACACCCCTATTTATTTTA+TGG | + | chr3_2:47113639-47113658 | Msa0407910:intron | 25.0% |
!!! | TACACCCCTATTTATTTTAT+GGG | + | chr3_2:47113640-47113659 | Msa0407910:intron | 25.0% |
! | GCATAACCCATAAAATAAAT+AGG | - | chr3_2:47113649-47113668 | None:intergenic | 25.0% |
!! | AAAGTGCTAATAAACTTGTT+TGG | - | chr3_2:47113930-47113949 | None:intergenic | 25.0% |
!!! | ATTCCCGTTATTTTTTCAAA+AGG | + | chr3_2:47113961-47113980 | Msa0407910:intron | 25.0% |
!!! | TTCCCGTTATTTTTTCAAAA+GGG | + | chr3_2:47113962-47113981 | Msa0407910:intron | 25.0% |
!!! | AGACCCTTTTGAAAAAATAA+CGG | - | chr3_2:47113968-47113987 | None:intergenic | 25.0% |
!! | TTCAAAAGGGTCTTATAATT+AGG | + | chr3_2:47113975-47113994 | Msa0407910:intron | 25.0% |
!! | TCAAAAGGGTCTTATAATTA+GGG | + | chr3_2:47113976-47113995 | Msa0407910:intron | 25.0% |
! | TGTATATGTTTGGTATCTTA+TGG | - | chr3_2:47114234-47114253 | None:intergenic | 25.0% |
! | TGTTGTCAAATGTATATGTT+TGG | - | chr3_2:47114244-47114263 | None:intergenic | 25.0% |
! | GTCTAAGTTACTCTAAATAA+AGG | + | chr3_2:47114510-47114529 | Msa0407910:intron | 25.0% |
! | ATTCTAGACACTTTCAATAT+AGG | - | chr3_2:47114755-47114774 | None:intergenic | 25.0% |
! | AAGTACGTTAAAACTGATAT+TGG | + | chr3_2:47114782-47114801 | Msa0407910:intron | 25.0% |
! | GATGTAATGTAATGAACTTT+GGG | - | chr3_2:47114918-47114937 | None:intergenic | 25.0% |
! | AGATGTAATGTAATGAACTT+TGG | - | chr3_2:47114919-47114938 | None:intergenic | 25.0% |
! | ATAATATAGAGAACCTATGA+CGG | - | chr3_2:47115215-47115234 | None:intergenic | 25.0% |
! | AGGTTCTCTATATTATCAAA+AGG | + | chr3_2:47115219-47115238 | Msa0407910:intron | 25.0% |
!!! | GTTTTTCATTGGTTAAGTAA+GGG | - | chr3_2:47115567-47115586 | None:intergenic | 25.0% |
!!! | GCGAACTATATTTTAAGAAA+GGG | - | chr3_2:47115854-47115873 | None:intergenic | 25.0% |
!!! | AGCGAACTATATTTTAAGAA+AGG | - | chr3_2:47115855-47115874 | None:intergenic | 25.0% |
! | AAAATTGAACTCAAAAACTC+TGG | + | chr3_2:47116277-47116296 | Msa0407910:intron | 25.0% |
! | AATAGTTATCACTCAAGTAT+AGG | - | chr3_2:47116959-47116978 | None:intergenic | 25.0% |
!! | CTAATGATTTAGAGCTTAAA+AGG | - | chr3_2:47117603-47117622 | None:intergenic | 25.0% |
!!! | CTTTTAAGCTCTAAATCATT+AGG | + | chr3_2:47117601-47117620 | Msa0407910:intron | 25.0% |
!!! | TTTGATTTGAAATATCATCC+AGG | - | chr3_2:47117909-47117928 | None:intergenic | 25.0% |
! | GATTAAGCATATGGAAAATA+AGG | - | chr3_2:47118327-47118346 | None:intergenic | 25.0% |
! | ATTCTAGACACTTTCAATAT+AGG | - | chr3_2:47114755-47114774 | None:intergenic | 25.0% |
! | AAGTACGTTAAAACTGATAT+TGG | + | chr3_2:47114782-47114801 | Msa0407910:intron | 25.0% |
!!! | AGATTGTTTTTATGATGTTC+TGG | - | chr3_2:47119175-47119194 | None:intergenic | 25.0% |
! | TTTGATCATAAATGGTACAA+AGG | + | chr3_2:47119225-47119244 | Msa0407910:intron | 25.0% |
! | TTGATCATAAATGGTACAAA+GGG | + | chr3_2:47119226-47119245 | Msa0407910:intron | 25.0% |
! | TCTATCTCTTAAACTTAACT+CGG | + | chr3_2:47119701-47119720 | Msa0407910:intron | 25.0% |
! | TCATTAGAATGGAGAAAAAT+TGG | - | chr3_2:47120461-47120480 | None:intergenic | 25.0% |
! | ACAAAACTCATTCATTAGAA+TGG | - | chr3_2:47120472-47120491 | None:intergenic | 25.0% |
!!! | ATGATGATATATTTTTTCGG+AGG | - | chr3_2:47120515-47120534 | None:intergenic | 25.0% |
! | TTTCTGCAGTATATATTGAT+AGG | - | chr3_2:47120895-47120914 | None:intergenic | 25.0% |
! | TCAATATATACTGCAGAAAA+AGG | + | chr3_2:47120896-47120915 | Msa0407910:intron | 25.0% |
!!! | TTTTCTTGGTGATGAAAATA+GGG | - | chr3_2:47121059-47121078 | None:intergenic | 25.0% |
!!! | TTTTTCTTGGTGATGAAAAT+AGG | - | chr3_2:47121060-47121079 | None:intergenic | 25.0% |
!! | AATTAATTTTGCAACCTTAG+GGG | + | chr3_2:47121576-47121595 | Msa0407910:intron | 25.0% |
! | ATGAAAGGTTCAACAAAAAA+TGG | + | chr3_2:47122219-47122238 | Msa0407910:CDS | 25.0% |
! | ATTAAAAGTGGTTGTAAAGT+AGG | + | chr3_2:47122893-47122912 | Msa0407910:intron | 25.0% |
! | AATCCAAAAAACTAAATGGA+AGG | - | chr3_2:47122943-47122962 | None:intergenic | 25.0% |
!!! | CTGTTTTAACTATATGTGAA+TGG | + | chr3_2:47123059-47123078 | Msa0407910:intron | 25.0% |
! | TTGAGAAGATCAAGATATAA+CGG | - | chr3_2:47123635-47123654 | None:intergenic | 25.0% |
!! | TTTTTCTTTGACTCATAGTT+TGG | + | chr3_2:47123765-47123784 | Msa0407910:intron | 25.0% |
!! | GTTTATTATGTTTAGAGTAC+TGG | + | chr3_2:47123818-47123837 | Msa0407910:three_prime_UTR | 25.0% |
!!! | ACCCTTATTTTGATGACTTT+CGG | - | chr3_2:47113163-47113182 | None:intergenic | 30.0% |
ACTCTTATGATACATAGTCA+TGG | + | chr3_2:47113308-47113327 | Msa0407910:intron | 30.0% | |
! | GATTAATGATGTTGTTGCTT+TGG | - | chr3_2:47113501-47113520 | None:intergenic | 30.0% |
!!! | GGTAGTATCGATTTTCATTT+TGG | - | chr3_2:47113523-47113542 | None:intergenic | 30.0% |
!! | ATTTTATGGGTTATGCTAAC+TGG | + | chr3_2:47113653-47113672 | Msa0407910:intron | 30.0% |
!! | GACCCTTTTGAAAAAATAAC+GGG | - | chr3_2:47113967-47113986 | None:intergenic | 30.0% |
! | CAAAAGGGTCTTATAATTAG+GGG | + | chr3_2:47113977-47113996 | Msa0407910:intron | 30.0% |
TTGCACTATTGATATTGTCA+TGG | - | chr3_2:47114107-47114126 | None:intergenic | 30.0% | |
ACGAATGTCTTCATTCAATT+TGG | - | chr3_2:47114200-47114219 | None:intergenic | 30.0% | |
! | AAATTAATTTGATCCACCGA+GGG | - | chr3_2:47114425-47114444 | None:intergenic | 30.0% |
! | CAATATTATGCATGATGATG+CGG | - | chr3_2:47114631-47114650 | None:intergenic | 30.0% |
!! | ACTTTTCTCCTTGTTTGTTT+TGG | - | chr3_2:47114691-47114710 | None:intergenic | 30.0% |
!! | AGAAAAGTGCTTTAGCTTAA+AGG | + | chr3_2:47114703-47114722 | Msa0407910:intron | 30.0% |
AACCTGAACAAATAAAGGAA+GGG | + | chr3_2:47115040-47115059 | Msa0407910:intron | 30.0% | |
TAATATAGAGAACCTATGAC+GGG | - | chr3_2:47115214-47115233 | None:intergenic | 30.0% | |
! | GTCATGATTGACTTATGTTT+AGG | - | chr3_2:47115323-47115342 | None:intergenic | 30.0% |
ATCATGACATAATCCTAAAC+CGG | + | chr3_2:47115335-47115354 | Msa0407910:intron | 30.0% | |
TTAAGTAAGGGATTAACTTC+CGG | - | chr3_2:47115555-47115574 | None:intergenic | 30.0% | |
!! | GGTTTTTCATTGGTTAAGTA+AGG | - | chr3_2:47115568-47115587 | None:intergenic | 30.0% |
TTAAAATATAGTTCGCTACG+CGG | + | chr3_2:47115858-47115877 | Msa0407910:intron | 30.0% | |
!! | ACTTTTTGAAAATGTTCTGG+TGG | - | chr3_2:47115948-47115967 | None:intergenic | 30.0% |
!! | AGCACTTTTTGAAAATGTTC+TGG | - | chr3_2:47115951-47115970 | None:intergenic | 30.0% |
!!! | ATTTTCAAAAAGTGCTGTCT+GGG | + | chr3_2:47115955-47115974 | Msa0407910:intron | 30.0% |
! | AAATACGATTTTTGCACTTC+TGG | - | chr3_2:47116130-47116149 | None:intergenic | 30.0% |
CATTAGAACACTTGAAATTG+AGG | - | chr3_2:47116165-47116184 | None:intergenic | 30.0% | |
! | AACATGAATTCTAGAAGCTT+AGG | - | chr3_2:47116191-47116210 | None:intergenic | 30.0% |
AGATAGCTTATCATACCTTT+GGG | - | chr3_2:47116235-47116254 | None:intergenic | 30.0% | |
TAGATAGCTTATCATACCTT+TGG | - | chr3_2:47116236-47116255 | None:intergenic | 30.0% | |
! | AACTAAGTTCCTCTTGTTTA+GGG | - | chr3_2:47116333-47116352 | None:intergenic | 30.0% |
! | GAGAAGAAGAAATAATTTGC+TGG | + | chr3_2:47116485-47116504 | Msa0407910:intron | 30.0% |
!! | AGAAGAAATAATTTGCTGGT+TGG | + | chr3_2:47116489-47116508 | Msa0407910:intron | 30.0% |
TCTGTCTCTTAAACTTAACT+CGG | + | chr3_2:47116623-47116642 | Msa0407910:intron | 30.0% | |
AGGTGATCATGTATTCTTAA+AGG | - | chr3_2:47116732-47116751 | None:intergenic | 30.0% | |
!! | GTTGTTTCTTGAATGATTTC+TGG | + | chr3_2:47116848-47116867 | Msa0407910:intron | 30.0% |
TTATCACTCAAGTATAGGTA+TGG | - | chr3_2:47116954-47116973 | None:intergenic | 30.0% | |
! | CAATTTTCACTTCACACTTT+TGG | - | chr3_2:47117159-47117178 | None:intergenic | 30.0% |
! | CAAAAGTGTGAAGTGAAAAT+TGG | + | chr3_2:47117157-47117176 | Msa0407910:intron | 30.0% |
TGTTCTGTAGGTAGATTTAA+CGG | + | chr3_2:47117258-47117277 | Msa0407910:intron | 30.0% | |
GAAAGGACATGATTCAATTT+GGG | - | chr3_2:47117323-47117342 | None:intergenic | 30.0% | |
AGAAAGGACATGATTCAATT+TGG | - | chr3_2:47117324-47117343 | None:intergenic | 30.0% | |
AATCATGTCCTTTCTAAGTA+CGG | + | chr3_2:47117329-47117348 | Msa0407910:intron | 30.0% | |
! | TGGTTATCCAAAATTTTCCA+TGG | - | chr3_2:47117668-47117687 | None:intergenic | 30.0% |
TGCTTGTAAGTTGTATGAAA+AGG | - | chr3_2:47117821-47117840 | None:intergenic | 30.0% | |
! | TTTGAAATATCATCCAGGAA+AGG | - | chr3_2:47117904-47117923 | None:intergenic | 30.0% |
TAAACATGAGACAAAGACAT+TGG | - | chr3_2:47117956-47117975 | None:intergenic | 30.0% | |
! | TAGTTTTTGCTTCGAAGATA+TGG | - | chr3_2:47118058-47118077 | None:intergenic | 30.0% |
!! | TAATAGGTGGATTAAGCATA+TGG | - | chr3_2:47118336-47118355 | None:intergenic | 30.0% |
TCAATATAGGCGTTACAATT+TGG | - | chr3_2:47118805-47118824 | None:intergenic | 30.0% | |
CATTAGAACACTTGAAATTG+AGG | - | chr3_2:47116165-47116184 | None:intergenic | 30.0% | |
TGATCATAAATGGTACAAAG+GGG | + | chr3_2:47119227-47119246 | Msa0407910:intron | 30.0% | |
CAAGAAAATCCATAAACAAG+AGG | + | chr3_2:47119400-47119419 | Msa0407910:intron | 30.0% | |
! | AACTAAGTTCCTCTTGTTTA+TGG | - | chr3_2:47116333-47116352 | None:intergenic | 30.0% |
ATAAACAAGAGGAACTTAGT+TGG | + | chr3_2:47119411-47119430 | Msa0407910:intron | 30.0% | |
AGAAGGATGAAAGGAATATT+GGG | + | chr3_2:47119507-47119526 | Msa0407910:intron | 30.0% | |
! | GAGAACAAGAAATAATTTGC+TGG | + | chr3_2:47119564-47119583 | Msa0407910:intron | 30.0% |
!! | ACAAGAAATAATTTGCTGGT+TGG | + | chr3_2:47119568-47119587 | Msa0407910:intron | 30.0% |
! | CTTTTATGACAAAGAGCAAT+TGG | - | chr3_2:47119674-47119693 | None:intergenic | 30.0% |
CTATCTCTTAAACTTAACTC+GGG | + | chr3_2:47119702-47119721 | Msa0407910:intron | 30.0% | |
! | GAAGGCTTATAAGATTTGTT+TGG | + | chr3_2:47120035-47120054 | Msa0407910:intron | 30.0% |
AAGATGCATCTTGTTGATAT+AGG | - | chr3_2:47120066-47120085 | None:intergenic | 30.0% | |
! | AACAAGATGCATCTTCTTTT+CGG | + | chr3_2:47120071-47120090 | Msa0407910:intron | 30.0% |
GAGAAAAATTGGTATCAATG+GGG | - | chr3_2:47120450-47120469 | None:intergenic | 30.0% | |
GGAGAAAAATTGGTATCAAT+GGG | - | chr3_2:47120451-47120470 | None:intergenic | 30.0% | |
TGGAGAAAAATTGGTATCAA+TGG | - | chr3_2:47120452-47120471 | None:intergenic | 30.0% | |
TTAGTGATGATACTTCAATG+TGG | + | chr3_2:47120853-47120872 | Msa0407910:intron | 30.0% | |
! | GTTGATGAATTAAAAAAGGC+AGG | + | chr3_2:47120944-47120963 | Msa0407910:five_prime_UTR | 30.0% |
TTTCATCACCAAGAAAAAGA+TGG | + | chr3_2:47121062-47121081 | Msa0407910:CDS | 30.0% | |
! | GTTAAGAAGAAGCACATATT+CGG | + | chr3_2:47121610-47121629 | Msa0407910:CDS | 30.0% |
CATATTCTATGTATTTGCAG+AGG | + | chr3_2:47122152-47122171 | Msa0407910:intron | 30.0% | |
GAAGGAAATCAAGAAATGAA+AGG | + | chr3_2:47122204-47122223 | Msa0407910:CDS | 30.0% | |
AGAGCTTAACTCAAAAGTAA+AGG | + | chr3_2:47122299-47122318 | Msa0407910:CDS | 30.0% | |
CTTATTACTTGTAGCAATGA+AGG | + | chr3_2:47122338-47122357 | Msa0407910:CDS | 30.0% | |
AGAATTAGCAGCAAAGAAAA+AGG | + | chr3_2:47122371-47122390 | Msa0407910:CDS | 30.0% | |
GAATTAGCAGCAAAGAAAAA+GGG | + | chr3_2:47122372-47122391 | Msa0407910:CDS | 30.0% | |
!! | TTGTTGATTTATGCTCTGAA+AGG | - | chr3_2:47122586-47122605 | None:intergenic | 30.0% |
AAATGCTGCTAAGTGTAAAA+TGG | - | chr3_2:47122628-47122647 | None:intergenic | 30.0% | |
TGGGAATCCAAAAAACTAAA+TGG | - | chr3_2:47122947-47122966 | None:intergenic | 30.0% | |
!! | TTCTAGATAAAAGCATTGAG+TGG | + | chr3_2:47123186-47123205 | Msa0407910:CDS | 30.0% |
! | TTTGCTGTATCTTCATTAGT+TGG | + | chr3_2:47123347-47123366 | Msa0407910:CDS | 30.0% |
! | TTCTAGAAGTGAGTATAGAA+AGG | - | chr3_2:47123406-47123425 | None:intergenic | 30.0% |
AGCAATGAAAGAAATGAACA+TGG | - | chr3_2:47123507-47123526 | None:intergenic | 30.0% | |
ATGTTCATTTCTTTCATTGC+TGG | + | chr3_2:47123506-47123525 | Msa0407910:CDS | 30.0% | |
ACAGATAAATATTCCAAGAG+TGG | + | chr3_2:47123545-47123564 | Msa0407910:CDS | 30.0% | |
TTGATCTTCTCAAAGTTACA+TGG | + | chr3_2:47123642-47123661 | Msa0407910:CDS | 30.0% | |
TGCCGAAAGTCATCAAAATA+AGG | + | chr3_2:47113158-47113177 | Msa0407910:five_prime_UTR | 35.0% | |
GCCGAAAGTCATCAAAATAA+GGG | + | chr3_2:47113159-47113178 | Msa0407910:five_prime_UTR | 35.0% | |
! | GAGAGAGTAAGTTTTCAACA+TGG | - | chr3_2:47113874-47113893 | None:intergenic | 35.0% |
CGATTATAAGGAACATGACA+TGG | - | chr3_2:47114130-47114149 | None:intergenic | 35.0% | |
! | CCATGTGGTTTTCGATTATA+AGG | - | chr3_2:47114142-47114161 | None:intergenic | 35.0% |
CCTTATAATCGAAAACCACA+TGG | + | chr3_2:47114139-47114158 | Msa0407910:intron | 35.0% | |
GTAGGATGATCTATTTGGTT+AGG | - | chr3_2:47114304-47114323 | None:intergenic | 35.0% | |
CTATGGTAGGATGATCTATT+TGG | - | chr3_2:47114309-47114328 | None:intergenic | 35.0% | |
ATCTTATTACCCGCTAACTA+TGG | - | chr3_2:47114326-47114345 | None:intergenic | 35.0% | |
! | AATTAATTTGATCCACCGAG+GGG | - | chr3_2:47114424-47114443 | None:intergenic | 35.0% |
! | CAAATTAATTTGATCCACCG+AGG | - | chr3_2:47114426-47114445 | None:intergenic | 35.0% |
CGTAAAAGAAGCTTATGAGT+TGG | - | chr3_2:47114565-47114584 | None:intergenic | 35.0% | |
CGCATCATCATGCATAATAT+TGG | + | chr3_2:47114629-47114648 | Msa0407910:intron | 35.0% | |
CTCTATCTCCAAAACAAACA+AGG | + | chr3_2:47114680-47114699 | Msa0407910:intron | 35.0% | |
!! | AAAGACACAAGTTGGTTCTA+CGG | + | chr3_2:47114965-47114984 | Msa0407910:intron | 35.0% |
! | CTTTATTTGTTCAGGTTCAC+GGG | - | chr3_2:47115037-47115056 | None:intergenic | 35.0% |
! | CCTTTATTTGTTCAGGTTCA+CGG | - | chr3_2:47115038-47115057 | None:intergenic | 35.0% |
GAACCTGAACAAATAAAGGA+AGG | + | chr3_2:47115039-47115058 | Msa0407910:intron | 35.0% | |
! | ATCCCTTCCTTTATTTGTTC+AGG | - | chr3_2:47115045-47115064 | None:intergenic | 35.0% |
AGTGAGTTCTACATAATCCT+AGG | + | chr3_2:47115080-47115099 | Msa0407910:intron | 35.0% | |
TCTACATAATCCTAGGCTAT+AGG | + | chr3_2:47115087-47115106 | Msa0407910:intron | 35.0% | |
CATTACTCTACATGTCATGA+CGG | + | chr3_2:47115246-47115265 | Msa0407910:intron | 35.0% | |
TACATGTCATGACGGTAAAA+AGG | + | chr3_2:47115254-47115273 | Msa0407910:intron | 35.0% | |
ACATGTCATGACGGTAAAAA+GGG | + | chr3_2:47115255-47115274 | Msa0407910:intron | 35.0% | |
TAAGTAAGGGATTAACTTCC+GGG | - | chr3_2:47115554-47115573 | None:intergenic | 35.0% | |
ACCAATGAAAAACCTAGCTA+AGG | + | chr3_2:47115574-47115593 | Msa0407910:intron | 35.0% | |
!!! | CATTTTCAAAAAGTGCTGTC+TGG | + | chr3_2:47115954-47115973 | Msa0407910:intron | 35.0% |
! | AGTAGATACGACATTTTGCA+CGG | + | chr3_2:47116065-47116084 | Msa0407910:intron | 35.0% |
CAAGAAATTACACAACCCAA+AGG | + | chr3_2:47116217-47116236 | Msa0407910:intron | 35.0% | |
CAAGAAAATCCCTAAACAAG+AGG | + | chr3_2:47116321-47116340 | Msa0407910:intron | 35.0% | |
! | CAACTAAGTTCCTCTTGTTT+AGG | - | chr3_2:47116334-47116353 | None:intergenic | 35.0% |
CTAAACAAGAGGAACTTAGT+TGG | + | chr3_2:47116332-47116351 | Msa0407910:intron | 35.0% | |
AGAAGGTTGAAAGGAAGATT+GGG | + | chr3_2:47116428-47116447 | Msa0407910:intron | 35.0% | |
TATGGAGAGGAAGAGAAAAT+CGG | + | chr3_2:47116451-47116470 | Msa0407910:intron | 35.0% | |
! | CGTTTAAGACAAAGAGCAAT+TGG | - | chr3_2:47116596-47116615 | None:intergenic | 35.0% |
AGAAGAGTTATGCAAACAAG+AGG | - | chr3_2:47116778-47116797 | None:intergenic | 35.0% | |
CTACCATACAATGCTTCATA+AGG | + | chr3_2:47116926-47116945 | Msa0407910:intron | 35.0% | |
AGATGTGCTTAACTTCAAGT+AGG | + | chr3_2:47117108-47117127 | Msa0407910:intron | 35.0% | |
! | TTTCACTTCACACTTTTGGA+CGG | - | chr3_2:47117155-47117174 | None:intergenic | 35.0% |
AGTACCAGTGAGTATAGTAT+CGG | - | chr3_2:47117191-47117210 | None:intergenic | 35.0% | |
GTTCTGTAGGTAGATTTAAC+GGG | + | chr3_2:47117259-47117278 | Msa0407910:intron | 35.0% | |
TGATTCAATTTGGGTGATTG+TGG | - | chr3_2:47117314-47117333 | None:intergenic | 35.0% | |
ATCATGTCCTTTCTAAGTAC+GGG | + | chr3_2:47117330-47117349 | Msa0407910:intron | 35.0% | |
AACTGTTAGAGATTCCACAA+TGG | - | chr3_2:47117396-47117415 | None:intergenic | 35.0% | |
! | TGATACAATTTGGTAGCACT+AGG | + | chr3_2:47117535-47117554 | Msa0407910:intron | 35.0% |
! | GATACAATTTGGTAGCACTA+GGG | + | chr3_2:47117536-47117555 | Msa0407910:intron | 35.0% |
! | GATGAAGCAATTTTGCTTGA+AGG | - | chr3_2:47117640-47117659 | None:intergenic | 35.0% |
!! | TCTGAAGCCATGGAAAATTT+TGG | + | chr3_2:47117658-47117677 | Msa0407910:intron | 35.0% |
!! | CAAAGGTTGATGATGGTATT+TGG | - | chr3_2:47117774-47117793 | None:intergenic | 35.0% |
TCTTAACCTTGAAGTCTCAA+AGG | - | chr3_2:47117791-47117810 | None:intergenic | 35.0% | |
GTAAAGCTTAGTTCAAGATG+AGG | - | chr3_2:47117854-47117873 | None:intergenic | 35.0% | |
! | CAAAGCATCTGCTATAACAT+TGG | + | chr3_2:47117878-47117897 | Msa0407910:intron | 35.0% |
! | ACATTGGATGGAGTATCTAA+AGG | - | chr3_2:47117940-47117959 | None:intergenic | 35.0% |
GAAATACTTGTTCGATCAGA+GGG | - | chr3_2:47117982-47118001 | None:intergenic | 35.0% | |
TGAAATACTTGTTCGATCAG+AGG | - | chr3_2:47117983-47118002 | None:intergenic | 35.0% | |
TATTGTGATGCATCGTCTAA+AGG | - | chr3_2:47118188-47118207 | None:intergenic | 35.0% | |
ACACAGTGAATTTCTTCTCA+AGG | + | chr3_2:47118207-47118226 | Msa0407910:intron | 35.0% | |
TGAATTTCTTCTCAAGGTCT+AGG | + | chr3_2:47118213-47118232 | Msa0407910:intron | 35.0% | |
! | TTAATCCACCTATTAGCTTC+TGG | + | chr3_2:47118341-47118360 | Msa0407910:intron | 35.0% |
AAGGGTTAATCAGAATGTTG+AGG | - | chr3_2:47118604-47118623 | None:intergenic | 35.0% | |
TCAACATTCTGATTAACCCT+TGG | + | chr3_2:47118603-47118622 | Msa0407910:intron | 35.0% | |
TAGTTGTTCTCTTTGAGTCT+AGG | - | chr3_2:47118728-47118747 | None:intergenic | 35.0% | |
ACTCAAAGAGAACAACTACT+TGG | + | chr3_2:47118730-47118749 | Msa0407910:intron | 35.0% | |
TTACAATTTGGTATCAGAGC+AGG | - | chr3_2:47118793-47118812 | None:intergenic | 35.0% | |
! | AACGGCATAAGTTGAGAATT+CGG | + | chr3_2:47118890-47118909 | Msa0407910:intron | 35.0% |
!! | AAGAGTCATTTTGAGTCTCA+TGG | + | chr3_2:47118916-47118935 | Msa0407910:intron | 35.0% |
AAGCTTGATCCCAAAGATAA+TGG | + | chr3_2:47118969-47118988 | Msa0407910:intron | 35.0% | |
AAATACGATTTCTGCACTTC+TGG | - | chr3_2:47119105-47119124 | None:intergenic | 35.0% | |
!! | TTATGATGTTCTGGAAGCTT+AGG | - | chr3_2:47119166-47119185 | None:intergenic | 35.0% |
!! | GGTGTATAATTAAGAGTGCT+TGG | - | chr3_2:47119463-47119482 | None:intergenic | 35.0% |
GAGAAGGATGAAAGGAATAT+TGG | + | chr3_2:47119506-47119525 | Msa0407910:intron | 35.0% | |
GATGAAAGGAATATTGGGTA+TGG | + | chr3_2:47119512-47119531 | Msa0407910:intron | 35.0% | |
TATGGAGAGGAAGAGAAAAT+CGG | + | chr3_2:47116451-47116470 | Msa0407910:intron | 35.0% | |
!! | GTTTGACTTGAAGTAGTCTT+TGG | + | chr3_2:47120128-47120147 | Msa0407910:intron | 35.0% |
ACTTGAAGTAGTCTTTGGAT+GGG | + | chr3_2:47120133-47120152 | Msa0407910:intron | 35.0% | |
TTAATAGTCGGGTTTGATGA+AGG | + | chr3_2:47120333-47120352 | Msa0407910:intron | 35.0% | |
!!! | AAGATTTTGGGGTTTGTAGA+AGG | + | chr3_2:47120407-47120426 | Msa0407910:intron | 35.0% |
!!! | AGATTTTGGGGTTTGTAGAA+GGG | + | chr3_2:47120408-47120427 | Msa0407910:intron | 35.0% |
TGAAAATAGGGTATGCCATA+TGG | - | chr3_2:47121047-47121066 | None:intergenic | 35.0% | |
! | TGAGTAGACCATCTTTTTCT+TGG | - | chr3_2:47121073-47121092 | None:intergenic | 35.0% |
GATGTAGTATATAGAAGCTG+AGG | - | chr3_2:47121464-47121483 | None:intergenic | 35.0% | |
TGCACAAAGCAAAAAAGCAA+TGG | - | chr3_2:47121534-47121553 | None:intergenic | 35.0% | |
!! | AATGTTAACTTGTACCCTCA+AGG | + | chr3_2:47121901-47121920 | Msa0407910:intron | 35.0% |
TATCTTTACATGTGCCTTGA+GGG | - | chr3_2:47121918-47121937 | None:intergenic | 35.0% | |
AAATCAACACAAGAGAGAGA+AGG | + | chr3_2:47122186-47122205 | Msa0407910:CDS | 35.0% | |
AAGTGGCGTAGTTGAAATTA+TGG | + | chr3_2:47122275-47122294 | Msa0407910:CDS | 35.0% | |
GTAAAGGAATCTGACAAGAA+AGG | + | chr3_2:47122315-47122334 | Msa0407910:CDS | 35.0% | |
! | CATTGTCAGAGTTAGTTTCA+TGG | - | chr3_2:47122485-47122504 | None:intergenic | 35.0% |
! | AACTAGGCTCTGATTAAAAG+TGG | + | chr3_2:47122881-47122900 | Msa0407910:intron | 35.0% |
!!! | GCTCCTTCCATTTAGTTTTT+TGG | + | chr3_2:47122937-47122956 | Msa0407910:intron | 35.0% |
! | TTGCCAATGAAGCTTCTTTT+TGG | + | chr3_2:47123452-47123471 | Msa0407910:CDS | 35.0% |
AAGCCAAAAAGAAGCTTCAT+TGG | - | chr3_2:47123458-47123477 | None:intergenic | 35.0% | |
AGAAATGAACATGGCAACAA+TGG | - | chr3_2:47123498-47123517 | None:intergenic | 35.0% | |
ATAGAACAAGATACCACTCT+TGG | - | chr3_2:47123561-47123580 | None:intergenic | 35.0% | |
! | GATCAAGATATAACGGAAAC+TGG | - | chr3_2:47123628-47123647 | None:intergenic | 35.0% |
ATCTTCTCAAAGTTACATGG+AGG | + | chr3_2:47123645-47123664 | Msa0407910:CDS | 35.0% | |
TGGATTGAAACTCATGAGTT+TGG | + | chr3_2:47123734-47123753 | Msa0407910:intron | 35.0% | |
TTCCTTAACCATTGCCCTAA+GGG | - | chr3_2:47113681-47113700 | None:intergenic | 40.0% | |
TTTCCTTAACCATTGCCCTA+AGG | - | chr3_2:47113682-47113701 | None:intergenic | 40.0% | |
AATGTTAATCAGTGCCCTCA+GGG | - | chr3_2:47113811-47113830 | None:intergenic | 40.0% | |
AAATGTTAATCAGTGCCCTC+AGG | - | chr3_2:47113812-47113831 | None:intergenic | 40.0% | |
! | AAGGGTCTTATAATTAGGGG+CGG | + | chr3_2:47113980-47113999 | Msa0407910:intron | 40.0% |
!! | TTAGAAGCATCGTAACCATG+TGG | - | chr3_2:47114157-47114176 | None:intergenic | 40.0% |
ATGCTTCTAAATTGACCACG+TGG | + | chr3_2:47114167-47114186 | Msa0407910:intron | 40.0% | |
CAATTTGGTTAGTATCCACG+TGG | - | chr3_2:47114185-47114204 | None:intergenic | 40.0% | |
GATCATCCTACCATAGTTAG+CGG | + | chr3_2:47114313-47114332 | Msa0407910:intron | 40.0% | |
ATCATCCTACCATAGTTAGC+GGG | + | chr3_2:47114314-47114333 | Msa0407910:intron | 40.0% | |
TATTACCCGCTAACTATGGT+AGG | - | chr3_2:47114322-47114341 | None:intergenic | 40.0% | |
TCTAGCATCTCATATGTGTG+TGG | - | chr3_2:47114394-47114413 | None:intergenic | 40.0% | |
! | ATGCTAGATTTTGTACCCCT+CGG | + | chr3_2:47114406-47114425 | Msa0407910:intron | 40.0% |
! | ATGATGATGCGGATGATGTT+TGG | - | chr3_2:47114620-47114639 | None:intergenic | 40.0% |
!!! | TGTTTTGGAGATAGAGCTTG+TGG | - | chr3_2:47114676-47114695 | None:intergenic | 40.0% |
! | AAGTGCTTTAGCTTAAAGGC+AGG | + | chr3_2:47114707-47114726 | Msa0407910:intron | 40.0% |
TCCACTACAAAGACACAAGT+TGG | + | chr3_2:47114957-47114976 | Msa0407910:intron | 40.0% | |
ACCAACTTGTGTCTTTGTAG+TGG | - | chr3_2:47114961-47114980 | None:intergenic | 40.0% | |
CAAAGGTAAGGAGAAAGCTT+TGG | - | chr3_2:47115004-47115023 | None:intergenic | 40.0% | |
CCGTGAACCTGAACAAATAA+AGG | + | chr3_2:47115035-47115054 | Msa0407910:intron | 40.0% | |
CACACGTATAATCAATCGTC+AGG | - | chr3_2:47115156-47115175 | None:intergenic | 40.0% | |
GACGATTGATTATACGTGTG+TGG | + | chr3_2:47115156-47115175 | Msa0407910:intron | 40.0% | |
TTTAGCATGCACTACAGTCT+AGG | - | chr3_2:47115191-47115210 | None:intergenic | 40.0% | |
GAAACTAACACCACTGTGTT+GGG | + | chr3_2:47115277-47115296 | Msa0407910:intron | 40.0% | |
!! | TTTTACGGATTAATCCCGAG+TGG | + | chr3_2:47115522-47115541 | Msa0407910:intron | 40.0% |
AAGTAAGGGATTAACTTCCG+GGG | - | chr3_2:47115553-47115572 | None:intergenic | 40.0% | |
! | GCCTTAGCTAGGTTTTTCAT+TGG | - | chr3_2:47115578-47115597 | None:intergenic | 40.0% |
AAAACCTAGCTAAGGCACAT+CGG | + | chr3_2:47115582-47115601 | Msa0407910:intron | 40.0% | |
TCTTGTAATCCTTCCAAGGT+TGG | - | chr3_2:47115671-47115690 | None:intergenic | 40.0% | |
TGTCTCTTGTAATCCTTCCA+AGG | - | chr3_2:47115675-47115694 | None:intergenic | 40.0% | |
AACACCTACGTCTTGCTTAA+TGG | + | chr3_2:47115696-47115715 | Msa0407910:intron | 40.0% | |
AAGACCATTAAGCAAGACGT+AGG | - | chr3_2:47115703-47115722 | None:intergenic | 40.0% | |
TAAGCGTCCTATAAACGCTT+GGG | - | chr3_2:47116021-47116040 | None:intergenic | 40.0% | |
TTAAGCGTCCTATAAACGCT+TGG | - | chr3_2:47116022-47116041 | None:intergenic | 40.0% | |
GTGCAAAATGTCGTATCTAC+TGG | - | chr3_2:47116066-47116085 | None:intergenic | 40.0% | |
! | TTTTTGCACTTCTGGACTGA+TGG | - | chr3_2:47116122-47116141 | None:intergenic | 40.0% |
!! | GGTGTACAATTAAGAGTGCT+TGG | - | chr3_2:47116384-47116403 | None:intergenic | 40.0% |
AACCAGAATCAAAGTCAGAG+AGG | - | chr3_2:47116405-47116424 | None:intergenic | 40.0% | |
TCTCTGACTTTGATTCTGGT+TGG | + | chr3_2:47116404-47116423 | Msa0407910:intron | 40.0% | |
! | CTCTGACTTTGATTCTGGTT+GGG | + | chr3_2:47116405-47116424 | Msa0407910:intron | 40.0% |
GAGAAGGTTGAAAGGAAGAT+TGG | + | chr3_2:47116427-47116446 | Msa0407910:intron | 40.0% | |
GTTGAAAGGAAGATTGGGTA+TGG | + | chr3_2:47116433-47116452 | Msa0407910:intron | 40.0% | |
AGAGTTATGCAAACAAGAGG+TGG | - | chr3_2:47116775-47116794 | None:intergenic | 40.0% | |
GTGTAGAACTCCCTTATGTT+GGG | - | chr3_2:47116903-47116922 | None:intergenic | 40.0% | |
AGTGTAGAACTCCCTTATGT+TGG | - | chr3_2:47116904-47116923 | None:intergenic | 40.0% | |
!! | GCACCTTATGAAGCATTGTA+TGG | - | chr3_2:47116932-47116951 | None:intergenic | 40.0% |
! | GCTTGTATTCTAGAAGATGG+TGG | - | chr3_2:47117025-47117044 | None:intergenic | 40.0% |
! | CGTGCTTGTATTCTAGAAGA+TGG | - | chr3_2:47117028-47117047 | None:intergenic | 40.0% |
! | ACGGCTTTTCATAGAGCTTT+AGG | - | chr3_2:47117136-47117155 | None:intergenic | 40.0% |
CTATCCGATACTATACTCAC+TGG | + | chr3_2:47117184-47117203 | Msa0407910:intron | 40.0% | |
! | TCTGAGATAGTCAAGCTACA+TGG | - | chr3_2:47117214-47117233 | None:intergenic | 40.0% |
TCATGTCCTTTCTAAGTACG+GGG | + | chr3_2:47117331-47117350 | Msa0407910:intron | 40.0% | |
! | ATAACGATGGATTTCGTAGG+AGG | - | chr3_2:47117361-47117380 | None:intergenic | 40.0% |
! | CAGATAACGATGGATTTCGT+AGG | - | chr3_2:47117364-47117383 | None:intergenic | 40.0% |
AGAGATTCCACAATGGAAGT+GGG | - | chr3_2:47117389-47117408 | None:intergenic | 40.0% | |
TAGAGATTCCACAATGGAAG+TGG | - | chr3_2:47117390-47117409 | None:intergenic | 40.0% | |
AACAGACATTGCAGAGTTTG+TGG | - | chr3_2:47117479-47117498 | None:intergenic | 40.0% | |
! | GCAATGTCTGTTTTCATACC+AGG | + | chr3_2:47117487-47117506 | Msa0407910:intron | 40.0% |
! | AAGAAAGATTATTGGTGGCC+TGG | - | chr3_2:47117508-47117527 | None:intergenic | 40.0% |
! | AATTGCTTCATCTGAAGCCA+TGG | + | chr3_2:47117648-47117667 | Msa0407910:intron | 40.0% |
!! | GTTGACTTGCAGAAAAGAAC+TGG | - | chr3_2:47117688-47117707 | None:intergenic | 40.0% |
!! | GAAGTCTCAAAGGTTGATGA+TGG | - | chr3_2:47117781-47117800 | None:intergenic | 40.0% |
!! | CATCAACCTTTGAGACTTCA+AGG | + | chr3_2:47117782-47117801 | Msa0407910:intron | 40.0% |
CATGAGACAAAGACATTGGA+TGG | - | chr3_2:47117952-47117971 | None:intergenic | 40.0% | |
CAAATTGCGTTCCATACAAG+TGG | + | chr3_2:47118027-47118046 | Msa0407910:intron | 40.0% | |
ATATGGAGACACCACTTGTA+TGG | - | chr3_2:47118041-47118060 | None:intergenic | 40.0% | |
TGCCAATTCTAAATCATGCG+TGG | + | chr3_2:47118082-47118101 | Msa0407910:intron | 40.0% | |
GCCAATTCTAAATCATGCGT+GGG | + | chr3_2:47118083-47118102 | Msa0407910:intron | 40.0% | |
! | TCCCACGCATGATTTAGAAT+TGG | - | chr3_2:47118087-47118106 | None:intergenic | 40.0% |
ATGTAGTAGCTTATGCATCC+AGG | - | chr3_2:47118136-47118155 | None:intergenic | 40.0% | |
AAACCTCTCAACGAAGAATG+GGG | - | chr3_2:47118256-47118275 | None:intergenic | 40.0% | |
GAAACCTCTCAACGAAGAAT+GGG | - | chr3_2:47118257-47118276 | None:intergenic | 40.0% | |
GATGGTTCCAGTTGTATTCT+CGG | + | chr3_2:47118393-47118412 | Msa0407910:intron | 40.0% | |
AGTTGTATTCTCGGAAAGCT+GGG | + | chr3_2:47118402-47118421 | Msa0407910:intron | 40.0% | |
!! | GATCGTAATTTTAACGCCCA+AGG | + | chr3_2:47118752-47118771 | Msa0407910:intron | 40.0% |
CAGACAGCACCATTATCTTT+GGG | - | chr3_2:47118981-47119000 | None:intergenic | 40.0% | |
!! | CAAAGATAATGGTGCTGTCT+GGG | + | chr3_2:47118980-47118999 | Msa0407910:intron | 40.0% |
GTGCAAAACGTCATATCTAC+TGG | - | chr3_2:47119060-47119079 | None:intergenic | 40.0% | |
! | CACCTCTCTTAGTTTGATTC+TGG | + | chr3_2:47119479-47119498 | Msa0407910:intron | 40.0% |
AGCCAGAATCAAACTAAGAG+AGG | - | chr3_2:47119484-47119503 | None:intergenic | 40.0% | |
! | TCTCTTAGTTTGATTCTGGC+TGG | + | chr3_2:47119483-47119502 | Msa0407910:intron | 40.0% |
! | CTCTTAGTTTGATTCTGGCT+GGG | + | chr3_2:47119484-47119503 | Msa0407910:intron | 40.0% |
AAGGAATATTGGGTATGGAG+AGG | + | chr3_2:47119517-47119536 | Msa0407910:intron | 40.0% | |
TGTCAGAGGACTAATGTTCA+TGG | - | chr3_2:47116697-47116716 | None:intergenic | 40.0% | |
CTGTGGAGTTCTTATGGAAT+GGG | - | chr3_2:47120100-47120119 | None:intergenic | 40.0% | |
ACTGTGGAGTTCTTATGGAA+TGG | - | chr3_2:47120101-47120120 | None:intergenic | 40.0% | |
GCTTAACTGTGGAGTTCTTA+TGG | - | chr3_2:47120106-47120125 | None:intergenic | 40.0% | |
AAGTCAAACACGCTTAACTG+TGG | - | chr3_2:47120117-47120136 | None:intergenic | 40.0% | |
GACTTGAAGTAGTCTTTGGA+TGG | + | chr3_2:47120132-47120151 | Msa0407910:intron | 40.0% | |
CACATTGAAAAGACTCGTGT+TGG | + | chr3_2:47120202-47120221 | Msa0407910:intron | 40.0% | |
!! | AAAGACTCGTGTTGGTTTGT+AGG | + | chr3_2:47120210-47120229 | Msa0407910:intron | 40.0% |
!! | AAGACTCGTGTTGGTTTGTA+GGG | + | chr3_2:47120211-47120230 | Msa0407910:intron | 40.0% |
GTTATGTTCCATACGGAGTT+TGG | + | chr3_2:47120307-47120326 | Msa0407910:intron | 40.0% | |
ATTAACCACCAAACTCCGTA+TGG | - | chr3_2:47120318-47120337 | None:intergenic | 40.0% | |
! | GGAGTTTGGTGGTTAATAGT+CGG | + | chr3_2:47120321-47120340 | Msa0407910:intron | 40.0% |
! | GAGTTTGGTGGTTAATAGTC+GGG | + | chr3_2:47120322-47120341 | Msa0407910:intron | 40.0% |
GTTGTTATCATGCACTCAGT+TGG | + | chr3_2:47121389-47121408 | Msa0407910:intron | 40.0% | |
GTCAATTGAGCTATGCTCAT+AGG | + | chr3_2:47121490-47121509 | Msa0407910:intron | 40.0% | |
CCACACATGTATGACTCATA+AGG | - | chr3_2:47121667-47121686 | None:intergenic | 40.0% | |
CCTTATGAGTCATACATGTG+TGG | + | chr3_2:47121664-47121683 | Msa0407910:CDS | 40.0% | |
TATGAGTCATACATGTGTGG+TGG | + | chr3_2:47121667-47121686 | Msa0407910:CDS | 40.0% | |
ATGAGTCATACATGTGTGGT+GGG | + | chr3_2:47121668-47121687 | Msa0407910:CDS | 40.0% | |
TCATGTTCTCCGTAATCCAA+GGG | - | chr3_2:47121700-47121719 | None:intergenic | 40.0% | |
ATCATGTTCTCCGTAATCCA+AGG | - | chr3_2:47121701-47121720 | None:intergenic | 40.0% | |
!! | TTGAAAGTGTCATGCACGAA+AGG | + | chr3_2:47121749-47121768 | Msa0407910:CDS | 40.0% |
! | GTGTATTGACATGTGTGAAG+TGG | - | chr3_2:47121853-47121872 | None:intergenic | 40.0% |
GTATCTTTACATGTGCCTTG+AGG | - | chr3_2:47121919-47121938 | None:intergenic | 40.0% | |
TTGCTTAACATGTGCCCTAA+GGG | + | chr3_2:47122031-47122050 | Msa0407910:intron | 40.0% | |
!! | CATGTTAACTTGTGCCCTTA+GGG | - | chr3_2:47122048-47122067 | None:intergenic | 40.0% |
!! | TCATGTTAACTTGTGCCCTT+AGG | - | chr3_2:47122049-47122068 | None:intergenic | 40.0% |
!! | TTTTTGGCAGTAGCGAAAAG+TGG | + | chr3_2:47122258-47122277 | Msa0407910:CDS | 40.0% |
TATTTGCGTGCAGCAAAACA+TGG | + | chr3_2:47122411-47122430 | Msa0407910:CDS | 40.0% | |
TTCAAGTGCACGCATGATTT+CGG | - | chr3_2:47122442-47122461 | None:intergenic | 40.0% | |
AAATGATGTGGGACATCAAG+TGG | + | chr3_2:47122700-47122719 | Msa0407910:CDS | 40.0% | |
AACAAAGAAGGAAAAACCCC+AGG | + | chr3_2:47123134-47123153 | Msa0407910:CDS | 40.0% | |
AACCCCAGGTGAAATCTTTA+AGG | + | chr3_2:47123148-47123167 | Msa0407910:CDS | 40.0% | |
CTCCTTAAAGATTTCACCTG+GGG | - | chr3_2:47123153-47123172 | None:intergenic | 40.0% | |
CCTCCTTAAAGATTTCACCT+GGG | - | chr3_2:47123154-47123173 | None:intergenic | 40.0% | |
TCCTCCTTAAAGATTTCACC+TGG | - | chr3_2:47123155-47123174 | None:intergenic | 40.0% | |
ACAGGGAAACCAACATTTGA+AGG | + | chr3_2:47123305-47123324 | Msa0407910:CDS | 40.0% | |
CAGGGAAACCAACATTTGAA+GGG | + | chr3_2:47123306-47123325 | Msa0407910:CDS | 40.0% | |
ACAGCAAATCCTTCAAATGC+TGG | - | chr3_2:47123335-47123354 | None:intergenic | 40.0% | |
ACAACTCCATAGAATGTGAG+AGG | - | chr3_2:47123605-47123624 | None:intergenic | 40.0% | |
TCTCAAAGTTACATGGAGGA+AGG | + | chr3_2:47123649-47123668 | Msa0407910:CDS | 40.0% | |
TTAACACCCTTGATACTTGG+TGG | - | chr3_2:47123680-47123699 | None:intergenic | 40.0% | |
AGCTTAACACCCTTGATACT+TGG | - | chr3_2:47123683-47123702 | None:intergenic | 40.0% | |
GTTGAAGACATTGCAGACCA+AGG | + | chr3_2:47113265-47113284 | Msa0407910:five_prime_UTR | 45.0% | |
TTATGCTAACTGGTGCCCTT+AGG | + | chr3_2:47113663-47113682 | Msa0407910:intron | 45.0% | |
TATGCTAACTGGTGCCCTTA+GGG | + | chr3_2:47113664-47113683 | Msa0407910:intron | 45.0% | |
TTCCTTAACCATTGCCCTGA+GGG | + | chr3_2:47113794-47113813 | Msa0407910:intron | 45.0% | |
TTTGGAGATAGAGCTTGTGG+AGG | - | chr3_2:47114673-47114692 | None:intergenic | 45.0% | |
TCCTAGGCTATAGGTAACCT+CGG | + | chr3_2:47115096-47115115 | Msa0407910:intron | 45.0% | |
GTAACCTCGGGGAAAACATA+CGG | + | chr3_2:47115109-47115128 | Msa0407910:intron | 45.0% | |
! | TCAGGTTGTAATGAGTCACG+TGG | - | chr3_2:47115138-47115157 | None:intergenic | 45.0% |
TTATACGTGTGTGGTCGTGT+TGG | + | chr3_2:47115165-47115184 | Msa0407910:intron | 45.0% | |
GGAAACTAACACCACTGTGT+TGG | + | chr3_2:47115276-47115295 | Msa0407910:intron | 45.0% | |
AACACCACTGTGTTGGGATA+CGG | + | chr3_2:47115283-47115302 | Msa0407910:intron | 45.0% | |
TTTACCGTATCCCAACACAG+TGG | - | chr3_2:47115290-47115309 | None:intergenic | 45.0% | |
GGGAAACCTAAGATCGTCTT+CGG | + | chr3_2:47115366-47115385 | Msa0407910:intron | 45.0% | |
GCTATACCGAAGACGATCTT+AGG | - | chr3_2:47115375-47115394 | None:intergenic | 45.0% | |
TCGTCTTCGGTATAGCTTCA+TGG | + | chr3_2:47115379-47115398 | Msa0407910:intron | 45.0% | |
TGGTACAAGAGGTTCTCCAA+GGG | - | chr3_2:47115651-47115670 | None:intergenic | 45.0% | |
TTGGTACAAGAGGTTCTCCA+AGG | - | chr3_2:47115652-47115671 | None:intergenic | 45.0% | |
AGAACCTCTTGTACCAACCT+TGG | + | chr3_2:47115655-47115674 | Msa0407910:intron | 45.0% | |
! | TGGTCCAGAAATGTCGTTTG+AGG | - | chr3_2:47115928-47115947 | None:intergenic | 45.0% |
CTTGCTTGATTTCAGCTGCT+AGG | - | chr3_2:47116305-47116324 | None:intergenic | 45.0% | |
CACCTCTCTGACTTTGATTC+TGG | + | chr3_2:47116400-47116419 | Msa0407910:intron | 45.0% | |
! | CTTTGATTCTGGTTGGGAGA+AGG | + | chr3_2:47116411-47116430 | Msa0407910:intron | 45.0% |
AAGGAAGATTGGGTATGGAG+AGG | + | chr3_2:47116438-47116457 | Msa0407910:intron | 45.0% | |
CAATTGGATTGCATCCTCAC+GGG | - | chr3_2:47116580-47116599 | None:intergenic | 45.0% | |
GCAATTGGATTGCATCCTCA+CGG | - | chr3_2:47116581-47116600 | None:intergenic | 45.0% | |
CATTAGTCCTCTGACACGTT+AGG | + | chr3_2:47116701-47116720 | Msa0407910:intron | 45.0% | |
TCACCTTCGCTAAACTCCAA+AGG | + | chr3_2:47116746-47116765 | Msa0407910:intron | 45.0% | |
!! | AGACCTTTGGAGTTTAGCGA+AGG | - | chr3_2:47116752-47116771 | None:intergenic | 45.0% |
AAACAAGAGGTGGAGACCTT+TGG | - | chr3_2:47116765-47116784 | None:intergenic | 45.0% | |
AATGCCCTTGTCTCCAACTT+CGG | + | chr3_2:47116877-47116896 | Msa0407910:intron | 45.0% | |
TGCATACTGCGATGTTCTGT+AGG | + | chr3_2:47117246-47117265 | Msa0407910:intron | 45.0% | |
GGGTAAGAAATGAGCTGACT+TGG | + | chr3_2:47117279-47117298 | Msa0407910:intron | 45.0% | |
GGATTACCCCGTACTTAGAA+AGG | - | chr3_2:47117340-47117359 | None:intergenic | 45.0% | |
GAAGTGGGAACAGATAACGA+TGG | - | chr3_2:47117374-47117393 | None:intergenic | 45.0% | |
ATCTGTTCCCACTTCCATTG+TGG | + | chr3_2:47117379-47117398 | Msa0407910:intron | 45.0% | |
AACAGTTGAAGCAAACCTGC+TGG | + | chr3_2:47117409-47117428 | Msa0407910:intron | 45.0% | |
ATTGAACATCAGAGACCAGC+AGG | - | chr3_2:47117427-47117446 | None:intergenic | 45.0% | |
ACATTGCAGAGTTTGTGGTG+AGG | - | chr3_2:47117474-47117493 | None:intergenic | 45.0% | |
!! | GCTATAACATTGGCCTTTCC+TGG | + | chr3_2:47117888-47117907 | Msa0407910:intron | 45.0% |
GATGCATCGTCTAAAGGACT+CGG | - | chr3_2:47118182-47118201 | None:intergenic | 45.0% | |
CAACGAAGAATGGGGACAAA+TGG | - | chr3_2:47118248-47118267 | None:intergenic | 45.0% | |
GGAAACCTCTCAACGAAGAA+TGG | - | chr3_2:47118258-47118277 | None:intergenic | 45.0% | |
TTTGCAACCAACCAATTCCG+AGG | - | chr3_2:47118299-47118318 | None:intergenic | 45.0% | |
! | ATCCACCTATTAGCTTCTGG+TGG | + | chr3_2:47118344-47118363 | Msa0407910:intron | 45.0% |
AACCACCAGAAGCTAATAGG+TGG | - | chr3_2:47118349-47118368 | None:intergenic | 45.0% | |
CAGCTTTCCGAGAATACAAC+TGG | - | chr3_2:47118403-47118422 | None:intergenic | 45.0% | |
CAGTTGTATTCTCGGAAAGC+TGG | + | chr3_2:47118401-47118420 | Msa0407910:intron | 45.0% | |
CATAATCTGCGCCCACATAT+TGG | + | chr3_2:47118560-47118579 | Msa0407910:intron | 45.0% | |
CATTCTGATTAACCCTTGGC+CGG | + | chr3_2:47118607-47118626 | Msa0407910:intron | 45.0% | |
! | CGAGCAAAATGTCTGAAGCA+TGG | - | chr3_2:47118644-47118663 | None:intergenic | 45.0% |
!! | GTTGTTTCTGATCGTGCCTT+GGG | - | chr3_2:47118771-47118790 | None:intergenic | 45.0% |
CCAGACAGCACCATTATCTT+TGG | - | chr3_2:47118982-47119001 | None:intergenic | 45.0% | |
!! | CCAAAGATAATGGTGCTGTC+TGG | + | chr3_2:47118979-47118998 | Msa0407910:intron | 45.0% |
TTTCTGCACTTCTGGACTGA+TGG | - | chr3_2:47119097-47119116 | None:intergenic | 45.0% | |
CTTGCTAGATTTCAGCTGCT+AGG | - | chr3_2:47119384-47119403 | None:intergenic | 45.0% | |
TTACCAGTCTAACGTGTCAG+AGG | - | chr3_2:47119789-47119808 | None:intergenic | 45.0% | |
GAGAGGTCTGCTCTGATATT+TGG | - | chr3_2:47119816-47119835 | None:intergenic | 45.0% | |
CGGTTCCTCTATAAGATGTC+GGG | - | chr3_2:47119955-47119974 | None:intergenic | 45.0% | |
CCGGTTCCTCTATAAGATGT+CGG | - | chr3_2:47119956-47119975 | None:intergenic | 45.0% | |
CCGACATCTTATAGAGGAAC+CGG | + | chr3_2:47119953-47119972 | Msa0407910:intron | 45.0% | |
ATAGAGGAACCGGATCACAT+TGG | + | chr3_2:47119963-47119982 | Msa0407910:intron | 45.0% | |
CCTCTCATTCCAATGTGATC+CGG | - | chr3_2:47119975-47119994 | None:intergenic | 45.0% | |
CGGATCACATTGGAATGAGA+GGG | + | chr3_2:47119973-47119992 | Msa0407910:intron | 45.0% | |
CATGTAGTCCCATACCTACA+CGG | - | chr3_2:47120008-47120027 | None:intergenic | 45.0% | |
GTATGGGACTACATGGTTGA+AGG | + | chr3_2:47120013-47120032 | Msa0407910:intron | 45.0% | |
!! | TGTTGGTTTGTAGGGTCAGT+CGG | + | chr3_2:47120219-47120238 | Msa0407910:intron | 45.0% |
ATGTTCCATACGGAGTTTGG+TGG | + | chr3_2:47120310-47120329 | Msa0407910:intron | 45.0% | |
! | GCAGTCCTCTCGAAGATTTT+GGG | + | chr3_2:47120395-47120414 | Msa0407910:intron | 45.0% |
! | CAGTCCTCTCGAAGATTTTG+GGG | + | chr3_2:47120396-47120415 | Msa0407910:intron | 45.0% |
CAAACCCCAAAATCTTCGAG+AGG | - | chr3_2:47120403-47120422 | None:intergenic | 45.0% | |
AGAAGGGATGAGACACATAC+AGG | + | chr3_2:47120424-47120443 | Msa0407910:intron | 45.0% | |
ATGGTCTACTCAGTCATCGT+GGG | + | chr3_2:47121081-47121100 | Msa0407910:CDS | 45.0% | |
! | CCTACCACTGTGTTACTCAA+GGG | + | chr3_2:47121154-47121173 | Msa0407910:intron | 45.0% |
ATCTCCCTTGAGTAACACAG+TGG | - | chr3_2:47121161-47121180 | None:intergenic | 45.0% | |
AACCTTAGGGGCAATGAAGA+TGG | + | chr3_2:47121588-47121607 | Msa0407910:intron | 45.0% | |
AACCATCTTCATTGCCCCTA+AGG | - | chr3_2:47121593-47121612 | None:intergenic | 45.0% | |
CCATAAATGCTTCCAAGAGC+TGG | - | chr3_2:47121639-47121658 | None:intergenic | 45.0% | |
!! | CCAGCTCTTGGAAGCATTTA+TGG | + | chr3_2:47121636-47121655 | Msa0407910:CDS | 45.0% |
TGAGTCATACATGTGTGGTG+GGG | + | chr3_2:47121669-47121688 | Msa0407910:CDS | 45.0% | |
AGTGTCATGCACGAAAGGAA+AGG | + | chr3_2:47121754-47121773 | Msa0407910:CDS | 45.0% | |
GTTGCTTAACATGTGCCCTA+AGG | + | chr3_2:47122030-47122049 | Msa0407910:intron | 45.0% | |
TAGACAACCGCAAGTTGTTG+AGG | + | chr3_2:47122533-47122552 | Msa0407910:CDS | 45.0% | |
AGACAACCGCAAGTTGTTGA+GGG | + | chr3_2:47122534-47122553 | Msa0407910:CDS | 45.0% | |
GTTGTGGAAGAGGCTTTCTA+TGG | + | chr3_2:47122557-47122576 | Msa0407910:CDS | 45.0% | |
AACACTGCTTGGAGGATATC+TGG | + | chr3_2:47122666-47122685 | Msa0407910:CDS | 45.0% | |
GATGTCCCACATCATTTGCA+TGG | - | chr3_2:47122697-47122716 | None:intergenic | 45.0% | |
! | CCCAGGTGAAATCTTTAAGG+AGG | + | chr3_2:47123151-47123170 | Msa0407910:CDS | 45.0% |
GAATGTGAGAGGCAAGCAAA+TGG | - | chr3_2:47123594-47123613 | None:intergenic | 45.0% | |
TGCTTGCCTCTCACATTCTA+TGG | + | chr3_2:47123596-47123615 | Msa0407910:CDS | 45.0% | |
!! | TCAAGGGTGTTAAGCTGTAG+AGG | + | chr3_2:47123687-47123706 | Msa0407910:CDS | 45.0% |
!! | ATAATCAAATATTAAAAAAA+AGG | + | chr3_2:47113473-47113492 | Msa0407910:intron | 5.0% |
!! | AAGAAAAATATATAAAATAA+GGG | - | chr3_2:47113835-47113854 | None:intergenic | 5.0% |
TGCCCTTAGGGCAATGGTTA+AGG | + | chr3_2:47113676-47113695 | Msa0407910:intron | 50.0% | |
CTTCCTTAACCATTGCCCTG+AGG | + | chr3_2:47113793-47113812 | Msa0407910:intron | 50.0% | |
! | CTAGATTTTGTACCCCTCGG+TGG | + | chr3_2:47114409-47114428 | Msa0407910:intron | 50.0% |
! | TTCAGGTTCACGGGTTTCTC+GGG | - | chr3_2:47115028-47115047 | None:intergenic | 50.0% |
! | GTTCAGGTTCACGGGTTTCT+CGG | - | chr3_2:47115029-47115048 | None:intergenic | 50.0% |
CCTAGGCTATAGGTAACCTC+GGG | + | chr3_2:47115097-47115116 | Msa0407910:intron | 50.0% | |
CTAGGCTATAGGTAACCTCG+GGG | + | chr3_2:47115098-47115117 | Msa0407910:intron | 50.0% | |
! | GTAACCGTATGTTTTCCCCG+AGG | - | chr3_2:47115116-47115135 | None:intergenic | 50.0% |
GTGCATGCTAAACCCGTCAT+AGG | + | chr3_2:47115199-47115218 | Msa0407910:intron | 50.0% | |
TGGGATACGGTAAACGCATC+AGG | + | chr3_2:47115296-47115315 | Msa0407910:intron | 50.0% | |
AATCCTAAACCGGACGATCG+AGG | + | chr3_2:47115345-47115364 | Msa0407910:intron | 50.0% | |
ATCCTAAACCGGACGATCGA+GGG | + | chr3_2:47115346-47115365 | Msa0407910:intron | 50.0% | |
TTAGGTTTCCCTCGATCGTC+CGG | - | chr3_2:47115357-47115376 | None:intergenic | 50.0% | |
GGTACAAGAGGTTCTCCAAG+GGG | - | chr3_2:47115650-47115669 | None:intergenic | 50.0% | |
!! | CCTTCCAAGGTTGGTACAAG+AGG | - | chr3_2:47115662-47115681 | None:intergenic | 50.0% |
CCTCTTGTACCAACCTTGGA+AGG | + | chr3_2:47115659-47115678 | Msa0407910:intron | 50.0% | |
GTTCTCGACAAGCTATGTCG+AGG | + | chr3_2:47115815-47115834 | Msa0407910:intron | 50.0% | |
CGGACCTCAAACGACATTTC+TGG | + | chr3_2:47115921-47115940 | Msa0407910:intron | 50.0% | |
CACGTTTAAGCGTGCAGAGA+AGG | + | chr3_2:47115983-47116002 | Msa0407910:intron | 50.0% | |
! | ATCTACTGGTCTGCACGCTT+GGG | - | chr3_2:47116052-47116071 | None:intergenic | 50.0% |
! | TATCTACTGGTCTGCACGCT+TGG | - | chr3_2:47116053-47116072 | None:intergenic | 50.0% |
! | ACATTTTGCACGGTTGAGCG+TGG | + | chr3_2:47116075-47116094 | Msa0407910:intron | 50.0% |
CTGGTTGGGAGAAGGTTGAA+AGG | + | chr3_2:47116419-47116438 | Msa0407910:intron | 50.0% | |
ATGATACTATGCAGCCCGTG+AGG | + | chr3_2:47116563-47116582 | Msa0407910:intron | 50.0% | |
TCCAACTTCGGCCCAACATA+AGG | + | chr3_2:47116889-47116908 | Msa0407910:intron | 50.0% | |
CCAACTTCGGCCCAACATAA+GGG | + | chr3_2:47116890-47116909 | Msa0407910:intron | 50.0% | |
TCTGACTGACCATCAGTCTG+CGG | + | chr3_2:47117079-47117098 | Msa0407910:intron | 50.0% | |
TGTCCCCATTCTTCGTTGAG+AGG | + | chr3_2:47118250-47118269 | Msa0407910:intron | 50.0% | |
GCGAACCACCAGAAGCTAAT+AGG | - | chr3_2:47118352-47118371 | None:intergenic | 50.0% | |
GCCGTTACCATCGAACTCTA+GGG | + | chr3_2:47118370-47118389 | Msa0407910:intron | 50.0% | |
CCCCTAGAGTTCGATGGTAA+CGG | - | chr3_2:47118374-47118393 | None:intergenic | 50.0% | |
CCGTTACCATCGAACTCTAG+GGG | + | chr3_2:47118371-47118390 | Msa0407910:intron | 50.0% | |
! | TACCATCGAACTCTAGGGGA+TGG | + | chr3_2:47118375-47118394 | Msa0407910:intron | 50.0% |
AACCATCCCCTAGAGTTCGA+TGG | - | chr3_2:47118380-47118399 | None:intergenic | 50.0% | |
! | CTGGGTTTTCCAACGACTGT+TGG | + | chr3_2:47118420-47118439 | Msa0407910:intron | 50.0% |
! | GGTTTTCCAACGACTGTTGG+TGG | + | chr3_2:47118423-47118442 | Msa0407910:intron | 50.0% |
! | TTTCCAACGACTGTTGGTGG+AGG | + | chr3_2:47118426-47118445 | Msa0407910:intron | 50.0% |
GGAGGCTGATGATTAACACC+TGG | + | chr3_2:47118444-47118463 | Msa0407910:intron | 50.0% | |
! | TCTGAAGCATGGAGAGAACG+TGG | - | chr3_2:47118633-47118652 | None:intergenic | 50.0% |
!! | GGTTGTTTCTGATCGTGCCT+TGG | - | chr3_2:47118772-47118791 | None:intergenic | 50.0% |
! | ATCTACTGGTCTGCACGCTT+GGG | - | chr3_2:47116052-47116071 | None:intergenic | 50.0% |
! | TATCTACTGGTCTGCACGCT+TGG | - | chr3_2:47116053-47116072 | None:intergenic | 50.0% |
! | GTTTGATTCTGGCTGGGAGA+AGG | + | chr3_2:47119490-47119509 | Msa0407910:intron | 50.0% |
CAATTGGATTGCAGCCTCAC+GGG | - | chr3_2:47119658-47119677 | None:intergenic | 50.0% | |
GCAATTGGATTGCAGCCTCA+CGG | - | chr3_2:47119659-47119678 | None:intergenic | 50.0% | |
AGTCCTCTGACACGTTAGAC+TGG | + | chr3_2:47119783-47119802 | Msa0407910:intron | 50.0% | |
TGTAACACCCACGGATGACA+AGG | + | chr3_2:47119883-47119902 | Msa0407910:intron | 50.0% | |
GTAACACCCACGGATGACAA+GGG | + | chr3_2:47119884-47119903 | Msa0407910:intron | 50.0% | |
CCGGATCACATTGGAATGAG+AGG | + | chr3_2:47119972-47119991 | Msa0407910:intron | 50.0% | |
TTGGAATGAGAGGGATCCTG+AGG | + | chr3_2:47119982-47120001 | Msa0407910:intron | 50.0% | |
CGTGTAGGTATGGGACTACA+TGG | + | chr3_2:47120006-47120025 | Msa0407910:intron | 50.0% | |
GGGACTACATGGTTGAAGGA+AGG | + | chr3_2:47120017-47120036 | Msa0407910:intron | 50.0% | |
TCTTTGGATGGGTGACCTAC+CGG | + | chr3_2:47120144-47120163 | Msa0407910:intron | 50.0% | |
! | GGCAGTCCTCTCGAAGATTT+TGG | + | chr3_2:47120394-47120413 | Msa0407910:intron | 50.0% |
GATGGTCTACTCAGTCATCG+TGG | + | chr3_2:47121080-47121099 | Msa0407910:CDS | 50.0% | |
TGGTCTACTCAGTCATCGTG+GGG | + | chr3_2:47121082-47121101 | Msa0407910:CDS | 50.0% | |
! | GCCTACCACTGTGTTACTCA+AGG | + | chr3_2:47121153-47121172 | Msa0407910:intron | 50.0% |
CCCTTGAGTAACACAGTGGT+AGG | - | chr3_2:47121157-47121176 | None:intergenic | 50.0% | |
CATATTCGGTAGCCAGCTCT+TGG | + | chr3_2:47121624-47121643 | Msa0407910:CDS | 50.0% | |
GACAACCGCAAGTTGTTGAG+GGG | + | chr3_2:47122535-47122554 | Msa0407910:CDS | 50.0% | |
CACAACCCCTCAACAACTTG+CGG | - | chr3_2:47122543-47122562 | None:intergenic | 50.0% | |
TTGTTGAGGGGTTGTGGAAG+AGG | + | chr3_2:47122547-47122566 | Msa0407910:CDS | 50.0% | |
CACACAGCGAAAACACTGCT+TGG | + | chr3_2:47122655-47122674 | Msa0407910:CDS | 50.0% | |
ACAGCGAAAACACTGCTTGG+AGG | + | chr3_2:47122658-47122677 | Msa0407910:CDS | 50.0% | |
TGCTTGGAGGATATCTGGTG+CGG | + | chr3_2:47122671-47122690 | Msa0407910:CDS | 50.0% | |
TGCGGCCATGCAAATGATGT+GGG | + | chr3_2:47122689-47122708 | Msa0407910:CDS | 50.0% | |
GTGGGACATCAAGTGGTACA+AGG | + | chr3_2:47122707-47122726 | Msa0407910:CDS | 50.0% | |
GACGTTGCCTGATGTAGCAA+AGG | - | chr3_2:47123267-47123286 | None:intergenic | 50.0% | |
CTGTTTCCTGATTGCCTCCA+GGG | - | chr3_2:47123289-47123308 | None:intergenic | 50.0% | |
CTGGAGGCAATCAGGAAACA+GGG | + | chr3_2:47123288-47123307 | Msa0407910:CDS | 50.0% | |
GCTGGTTGCCCTTCAAATGT+TGG | - | chr3_2:47123317-47123336 | None:intergenic | 50.0% | |
GAAGGGCAACCAGCATTTGA+AGG | + | chr3_2:47123323-47123342 | Msa0407910:CDS | 50.0% | |
GTGCCACCACCAAGTATCAA+GGG | + | chr3_2:47123671-47123690 | Msa0407910:CDS | 50.0% | |
! | ACACCCTTGATACTTGGTGG+TGG | - | chr3_2:47123677-47123696 | None:intergenic | 50.0% |
AACTGGTGCCCTTAGGGCAA+TGG | + | chr3_2:47113670-47113689 | Msa0407910:intron | 55.0% | |
TGCCCTCAGGGCAATGGTTA+AGG | - | chr3_2:47113799-47113818 | None:intergenic | 55.0% | |
AATCAGTGCCCTCAGGGCAA+TGG | - | chr3_2:47113805-47113824 | None:intergenic | 55.0% | |
GGTTTCTCGGGGCAAAGGTA+AGG | - | chr3_2:47115016-47115035 | None:intergenic | 55.0% | |
TCAGGTTCACGGGTTTCTCG+GGG | - | chr3_2:47115027-47115046 | None:intergenic | 55.0% | |
CCCGAGGTTACCTATAGCCT+AGG | - | chr3_2:47115100-47115119 | None:intergenic | 55.0% | |
TTCCCTCGATCGTCCGGTTT+AGG | - | chr3_2:47115351-47115370 | None:intergenic | 55.0% | |
AATCCCGAGTGGAGTAACCC+CGG | + | chr3_2:47115533-47115552 | Msa0407910:intron | 55.0% | |
ACTTCCGGGGTTACTCCACT+CGG | - | chr3_2:47115540-47115559 | None:intergenic | 55.0% | |
GAGTCCGATGTGCCTTAGCT+AGG | - | chr3_2:47115589-47115608 | None:intergenic | 55.0% | |
CGGACTCCCTTAGTGATGTG+CGG | + | chr3_2:47115602-47115621 | Msa0407910:intron | 55.0% | |
GGACTCCCTTAGTGATGTGC+GGG | + | chr3_2:47115603-47115622 | Msa0407910:intron | 55.0% | |
AGGGACCCGCACATCACTAA+GGG | - | chr3_2:47115611-47115630 | None:intergenic | 55.0% | |
AAGGGACCCGCACATCACTA+AGG | - | chr3_2:47115612-47115631 | None:intergenic | 55.0% | |
GGGAACGAGATAAGCCGCAA+GGG | - | chr3_2:47115630-47115649 | None:intergenic | 55.0% | |
GCGTGCTCCCAAGCGTTTAT+AGG | + | chr3_2:47116011-47116030 | Msa0407910:intron | 55.0% | |
GGTTACGCCTAACGTGTCAG+AGG | - | chr3_2:47116711-47116730 | None:intergenic | 55.0% | |
TGGGCCGAAGTTGGAGACAA+GGG | - | chr3_2:47116884-47116903 | None:intergenic | 55.0% | |
TTGGGCCGAAGTTGGAGACA+AGG | - | chr3_2:47116885-47116904 | None:intergenic | 55.0% | |
CCCTTATGTTGGGCCGAAGT+TGG | - | chr3_2:47116893-47116912 | None:intergenic | 55.0% | |
ACTGACCATCAGTCTGCGGA+TGG | + | chr3_2:47117083-47117102 | Msa0407910:intron | 55.0% | |
TCTCACCATCCGCAGACTGA+TGG | - | chr3_2:47117091-47117110 | None:intergenic | 55.0% | |
TTTCCCACCAATCCTGCGCT+GGG | + | chr3_2:47118273-47118292 | Msa0407910:intron | 55.0% | |
CGCCGTTACCATCGAACTCT+AGG | + | chr3_2:47118369-47118388 | Msa0407910:intron | 55.0% | |
TGGACTGCAGCTATGCAGCA+AGG | - | chr3_2:47118471-47118490 | None:intergenic | 55.0% | |
ATGCTCAGTCTCAGCGACAG+TGG | - | chr3_2:47118491-47118510 | None:intergenic | 55.0% | |
CAACCCCGACGCCAATATGT+GGG | - | chr3_2:47118574-47118593 | None:intergenic | 55.0% | |
TCAACCCCGACGCCAATATG+TGG | - | chr3_2:47118575-47118594 | None:intergenic | 55.0% | |
AAGCATGGAGAGAACGTGGC+CGG | - | chr3_2:47118629-47118648 | None:intergenic | 55.0% | |
CTGGCTGGGAGAAGGATGAA+AGG | + | chr3_2:47119498-47119517 | Msa0407910:intron | 55.0% | |
TACGATACTTGCAGCCCGTG+AGG | + | chr3_2:47119641-47119660 | Msa0407910:intron | 55.0% | |
AGAGCAGACCTCTCCCAGTA+CGG | + | chr3_2:47119822-47119841 | Msa0407910:intron | 55.0% | |
TCCTCGAACCACACCGTACT+GGG | - | chr3_2:47119838-47119857 | None:intergenic | 55.0% | |
TGGTTCGAGGACGAACCAAG+CGG | + | chr3_2:47119847-47119866 | Msa0407910:intron | 55.0% | |
! | TGGTGGGCATGTAACACCCA+CGG | + | chr3_2:47119874-47119893 | Msa0407910:intron | 55.0% |
ACCCACGGATGACAAGGGTA+AGG | + | chr3_2:47119889-47119908 | Msa0407910:intron | 55.0% | |
CCCTTACCCTTGTCATCCGT+GGG | - | chr3_2:47119893-47119912 | None:intergenic | 55.0% | |
CCCACGGATGACAAGGGTAA+GGG | + | chr3_2:47119890-47119909 | Msa0407910:intron | 55.0% | |
CCACGGATGACAAGGGTAAG+GGG | + | chr3_2:47119891-47119910 | Msa0407910:intron | 55.0% | |
CATTGTCGTGCCTTGTGCAC+CGG | - | chr3_2:47119925-47119944 | None:intergenic | 55.0% | |
GCACAAGGCACGACAATGAG+CGG | + | chr3_2:47119927-47119946 | Msa0407910:intron | 55.0% | |
CGGCTCCCGACATCTTATAG+AGG | + | chr3_2:47119947-47119966 | Msa0407910:intron | 55.0% | |
ATCCTGAGGCCGTGTAGGTA+TGG | + | chr3_2:47119996-47120015 | Msa0407910:intron | 55.0% | |
TCCTGAGGCCGTGTAGGTAT+GGG | + | chr3_2:47119997-47120016 | Msa0407910:intron | 55.0% | |
CTTTGGATGGGTGACCTACC+GGG | + | chr3_2:47120145-47120164 | Msa0407910:intron | 55.0% | |
TGACCTACCGGGAAGTTTCC+CGG | + | chr3_2:47120156-47120175 | Msa0407910:intron | 55.0% | |
TTACCGGGAAACTTCCCGGT+AGG | - | chr3_2:47120162-47120181 | None:intergenic | 55.0% | |
ACGCTTACCGGGAAACTTCC+CGG | - | chr3_2:47120166-47120185 | None:intergenic | 55.0% | |
TCCTCACTCTCACGCTTACC+GGG | - | chr3_2:47120177-47120196 | None:intergenic | 55.0% | |
GTCCTCACTCTCACGCTTAC+CGG | - | chr3_2:47120178-47120197 | None:intergenic | 55.0% | |
GGGGCTGATCCCTTGGATTA+CGG | + | chr3_2:47121688-47121707 | Msa0407910:CDS | 55.0% | |
CGCAAGTTGTTGAGGGGTTG+TGG | + | chr3_2:47122541-47122560 | Msa0407910:CDS | 55.0% | |
GTGCGGCCATGCAAATGATG+TGG | + | chr3_2:47122688-47122707 | Msa0407910:CDS | 55.0% | |
GGCGTCTCCTTTGCTACATC+AGG | + | chr3_2:47123257-47123276 | Msa0407910:CDS | 55.0% | |
CCTGTTTCCTGATTGCCTCC+AGG | - | chr3_2:47123290-47123309 | None:intergenic | 55.0% | |
CCTGGAGGCAATCAGGAAAC+AGG | + | chr3_2:47123287-47123306 | Msa0407910:CDS | 55.0% | |
! | GGTGCCACCACCAAGTATCA+AGG | + | chr3_2:47123670-47123689 | Msa0407910:CDS | 55.0% |
TCACGGGTTTCTCGGGGCAA+AGG | - | chr3_2:47115021-47115040 | None:intergenic | 60.0% | |
CTTCCGGGGTTACTCCACTC+GGG | - | chr3_2:47115539-47115558 | None:intergenic | 60.0% | |
AGTGATGTGCGGGTCCCTTG+CGG | + | chr3_2:47115613-47115632 | Msa0407910:intron | 60.0% | |
GGGGAACGAGATAAGCCGCA+AGG | - | chr3_2:47115631-47115650 | None:intergenic | 60.0% | |
GCGGCTTATCTCGTTCCCCT+TGG | + | chr3_2:47115632-47115651 | Msa0407910:intron | 60.0% | |
GTTTCCCACCAATCCTGCGC+TGG | + | chr3_2:47118272-47118291 | Msa0407910:intron | 60.0% | |
CAGCCTCCACCAACAGTCGT+TGG | - | chr3_2:47118432-47118451 | None:intergenic | 60.0% | |
GCAGCTATGCAGCAAGGTCC+AGG | - | chr3_2:47118465-47118484 | None:intergenic | 60.0% | |
CTGCGCCCACATATTGGCGT+CGG | + | chr3_2:47118566-47118585 | Msa0407910:intron | 60.0% | |
TGCGCCCACATATTGGCGTC+GGG | + | chr3_2:47118567-47118586 | Msa0407910:intron | 60.0% | |
CTGCACGCTTAAGCGTGCAG+AGG | + | chr3_2:47119005-47119024 | Msa0407910:intron | 60.0% | |
AGACCTCTCCCAGTACGGTG+TGG | + | chr3_2:47119827-47119846 | Msa0407910:intron | 60.0% | |
GAACCACACCGTACTGGGAG+AGG | - | chr3_2:47119833-47119852 | None:intergenic | 60.0% | |
TCCCAGTACGGTGTGGTTCG+AGG | + | chr3_2:47119834-47119853 | Msa0407910:intron | 60.0% | |
GTCCTCGAACCACACCGTAC+TGG | - | chr3_2:47119839-47119858 | None:intergenic | 60.0% | |
AGGACGAACCAAGCGGAACC+TGG | + | chr3_2:47119854-47119873 | Msa0407910:intron | 60.0% | |
ACGAACCAAGCGGAACCTGG+TGG | + | chr3_2:47119857-47119876 | Msa0407910:intron | 60.0% | |
CGAACCAAGCGGAACCTGGT+GGG | + | chr3_2:47119858-47119877 | Msa0407910:intron | 60.0% | |
! | GTGGGTGTTACATGCCCACC+AGG | - | chr3_2:47119875-47119894 | None:intergenic | 60.0% |
CCCCTTACCCTTGTCATCCG+TGG | - | chr3_2:47119894-47119913 | None:intergenic | 60.0% | |
AGGGTAAGGGGAGTGATCGC+CGG | + | chr3_2:47119903-47119922 | Msa0407910:intron | 60.0% | |
TCCCATACCTACACGGCCTC+AGG | - | chr3_2:47120001-47120020 | None:intergenic | 60.0% | |
TCCCGGTAAGCGTGAGAGTG+AGG | + | chr3_2:47120173-47120192 | Msa0407910:intron | 60.0% | |
GTTGTAGCAGCACTCGTCGC+AGG | + | chr3_2:47123236-47123255 | Msa0407910:CDS | 60.0% | |
GCTACATCAGGCAACGTCCC+TGG | + | chr3_2:47123269-47123288 | Msa0407910:CDS | 60.0% | |
ACATCAGGCAACGTCCCTGG+AGG | + | chr3_2:47123272-47123291 | Msa0407910:CDS | 60.0% | |
CAACGTCCCTGGAGGCAATC+AGG | + | chr3_2:47123280-47123299 | Msa0407910:CDS | 60.0% | |
! | AGGCCCAGCGCAGGATTGGT+GGG | - | chr3_2:47118279-47118298 | None:intergenic | 65.0% |
ACCAATCCTGCGCTGGGCCT+CGG | + | chr3_2:47118279-47118298 | Msa0407910:intron | 65.0% | |
CGCTGGGCCTCGGAATTGGT+TGG | + | chr3_2:47118289-47118308 | Msa0407910:intron | 65.0% | |
GCGCCCACATATTGGCGTCG+GGG | + | chr3_2:47118568-47118587 | Msa0407910:intron | 65.0% | |
GAGAGAACGTGGCCGGCCAA+GGG | - | chr3_2:47118622-47118641 | None:intergenic | 65.0% | |
CATGCCCACCAGGTTCCGCT+TGG | - | chr3_2:47119865-47119884 | None:intergenic | 65.0% | |
GGAGTGATCGCCGGTGCACA+AGG | + | chr3_2:47119912-47119931 | Msa0407910:intron | 65.0% | |
GAGGGATCCTGAGGCCGTGT+AGG | + | chr3_2:47119991-47120010 | Msa0407910:intron | 65.0% | |
! | GTGTGGTGGGGCTGATCCCT+TGG | + | chr3_2:47121681-47121700 | Msa0407910:CDS | 65.0% |
GAGGCCCAGCGCAGGATTGG+TGG | - | chr3_2:47118280-47118299 | None:intergenic | 70.0% | |
TCCGAGGCCCAGCGCAGGAT+TGG | - | chr3_2:47118283-47118302 | None:intergenic | 70.0% | |
CCAATTCCGAGGCCCAGCGC+AGG | - | chr3_2:47118288-47118307 | None:intergenic | 70.0% | |
CCTGCGCTGGGCCTCGGAAT+TGG | + | chr3_2:47118285-47118304 | Msa0407910:intron | 70.0% | |
GGAGAGAACGTGGCCGGCCA+AGG | - | chr3_2:47118623-47118642 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_2 | gene | 47113124 | 47123924 | 47113124 | ID=Msa0407910;Name=Msa0407910 |
chr3_2 | mRNA | 47113124 | 47123924 | 47113124 | ID=Msa0407910-mRNA-1;Parent=Msa0407910;Name=Msa0407910-mRNA-1;_AED=0.25;_eAED=0.25;_QI=282|1|1|1|0.4|0.16|6|187|474 |
chr3_2 | exon | 47113124 | 47113286 | 47113124 | ID=Msa0407910-mRNA-1:exon:9049;Parent=Msa0407910-mRNA-1 |
chr3_2 | exon | 47120912 | 47121103 | 47120912 | ID=Msa0407910-mRNA-1:exon:9050;Parent=Msa0407910-mRNA-1 |
chr3_2 | exon | 47121596 | 47121775 | 47121596 | ID=Msa0407910-mRNA-1:exon:9051;Parent=Msa0407910-mRNA-1 |
chr3_2 | exon | 47122172 | 47122728 | 47122172 | ID=Msa0407910-mRNA-1:exon:9052;Parent=Msa0407910-mRNA-1 |
chr3_2 | exon | 47123092 | 47123751 | 47123092 | ID=Msa0407910-mRNA-1:exon:9053;Parent=Msa0407910-mRNA-1 |
chr3_2 | exon | 47123783 | 47123924 | 47123783 | ID=Msa0407910-mRNA-1:exon:9054;Parent=Msa0407910-mRNA-1 |
chr3_2 | five_prime_UTR | 47113124 | 47113286 | 47113124 | ID=Msa0407910-mRNA-1:five_prime_utr;Parent=Msa0407910-mRNA-1 |
chr3_2 | five_prime_UTR | 47120912 | 47121030 | 47120912 | ID=Msa0407910-mRNA-1:five_prime_utr;Parent=Msa0407910-mRNA-1 |
chr3_2 | CDS | 47121031 | 47121103 | 47121031 | ID=Msa0407910-mRNA-1:cds;Parent=Msa0407910-mRNA-1 |
chr3_2 | CDS | 47121596 | 47121775 | 47121596 | ID=Msa0407910-mRNA-1:cds;Parent=Msa0407910-mRNA-1 |
chr3_2 | CDS | 47122172 | 47122728 | 47122172 | ID=Msa0407910-mRNA-1:cds;Parent=Msa0407910-mRNA-1 |
chr3_2 | CDS | 47123092 | 47123706 | 47123092 | ID=Msa0407910-mRNA-1:cds;Parent=Msa0407910-mRNA-1 |
chr3_2 | three_prime_UTR | 47123707 | 47123751 | 47123707 | ID=Msa0407910-mRNA-1:three_prime_utr;Parent=Msa0407910-mRNA-1 |
chr3_2 | three_prime_UTR | 47123783 | 47123924 | 47123783 | ID=Msa0407910-mRNA-1:three_prime_utr;Parent=Msa0407910-mRNA-1 |
Gene Sequence |
Protein sequence |