Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1410390 | sp|P41152|HSF30_SOLPE | 34.865 | 370 | 178 | 10 | 48 | 378 | 2 | 347 | 1.19e-52 | 181 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1410390 | A0A396IIY0 | 87.943 | 423 | 7 | 3 | 1 | 380 | 1 | 422 | 0.0 | 741 |
Gene ID | Type | Classification |
---|---|---|
Msa1410390 | TF | HSF |
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0000910 | Msa1410390 | 0.814145 | 1.788509e-51 | -8.615850e-47 |
Msa0003220 | Msa1410390 | 0.842464 | 2.544597e-58 | -8.615850e-47 |
Msa0003270 | Msa1410390 | 0.818658 | 1.747746e-52 | -8.615850e-47 |
Msa0005270 | Msa1410390 | 0.802300 | 5.988715e-49 | -8.615850e-47 |
Msa0010770 | Msa1410390 | 0.836448 | 9.304285e-57 | -8.615850e-47 |
Msa0030300 | Msa1410390 | 0.806081 | 9.782402e-50 | -8.615850e-47 |
Msa0037120 | Msa1410390 | 0.820903 | 5.361874e-53 | -8.615850e-47 |
Msa0038870 | Msa1410390 | 0.833667 | 4.674091e-56 | -8.615850e-47 |
Msa0041690 | Msa1410390 | 0.832891 | 7.295794e-56 | -8.615850e-47 |
Msa0046560 | Msa1410390 | 0.804757 | 1.853074e-49 | -8.615850e-47 |
Msa0055100 | Msa1410390 | 0.819281 | 1.260906e-52 | -8.615850e-47 |
Msa0055660 | Msa1410390 | 0.826928 | 2.072358e-54 | -8.615850e-47 |
Msa0059890 | Msa1410390 | 0.804663 | 1.938611e-49 | -8.615850e-47 |
Msa0068430 | Msa1410390 | 0.809735 | 1.633671e-50 | -8.615850e-47 |
Msa0069330 | Msa1410390 | 0.804983 | 1.662014e-49 | -8.615850e-47 |
Msa0074750 | Msa1410390 | 0.810748 | 9.878603e-51 | -8.615850e-47 |
Msa0084340 | Msa1410390 | 0.812993 | 3.204843e-51 | -8.615850e-47 |
Msa0085370 | Msa1410390 | 0.806882 | 6.628339e-50 | -8.615850e-47 |
Msa0090550 | Msa1410390 | 0.801541 | 8.576143e-49 | -8.615850e-47 |
Msa0091610 | Msa1410390 | 0.822403 | 2.413417e-53 | -8.615850e-47 |
Msa0096580 | Msa1410390 | 0.817284 | 3.570726e-52 | -8.615850e-47 |
Msa0100160 | Msa1410390 | 0.800501 | 1.399371e-48 | -8.615850e-47 |
Msa0104550 | Msa1410390 | 0.806157 | 9.426136e-50 | -8.615850e-47 |
Msa0115090 | Msa1410390 | 0.807179 | 5.736568e-50 | -8.615850e-47 |
Msa0115370 | Msa1410390 | 0.820846 | 5.526952e-53 | -8.615850e-47 |
Msa0116790 | Msa1410390 | 0.806439 | 8.222585e-50 | -8.615850e-47 |
Msa1356610 | Msa1410390 | 0.814131 | 1.800652e-51 | -8.615850e-47 |
Msa1357080 | Msa1410390 | 0.807760 | 4.318858e-50 | -8.615850e-47 |
Msa1357890 | Msa1410390 | 0.814216 | 1.725090e-51 | -8.615850e-47 |
Msa1359560 | Msa1410390 | 0.800863 | 1.180501e-48 | -8.615850e-47 |
Msa1359920 | Msa1410390 | 0.806037 | 9.992843e-50 | -8.615850e-47 |
Msa1362420 | Msa1410390 | 0.829783 | 4.243479e-55 | -8.615850e-47 |
Msa1370590 | Msa1410390 | 0.816929 | 4.291862e-52 | -8.615850e-47 |
Msa1372290 | Msa1410390 | 0.840690 | 7.467999e-58 | -8.615850e-47 |
Msa1373850 | Msa1410390 | 0.827783 | 1.293025e-54 | -8.615850e-47 |
Msa1377800 | Msa1410390 | 0.803557 | 3.292959e-49 | -8.615850e-47 |
Msa1384100 | Msa1410390 | 0.813282 | 2.769639e-51 | -8.615850e-47 |
Msa1396940 | Msa1410390 | 0.816450 | 5.494733e-52 | -8.615850e-47 |
Msa1398090 | Msa1410390 | 0.814352 | 1.609905e-51 | -8.615850e-47 |
Msa1410390 | Msa1411950 | 0.827062 | 1.924469e-54 | -8.615850e-47 |
Msa1410390 | Msa1416260 | 0.812037 | 5.184964e-51 | -8.615850e-47 |
Msa1410390 | Msa1420250 | 0.813043 | 3.125081e-51 | -8.615850e-47 |
Msa1410390 | Msa1424350 | 0.801594 | 8.364951e-49 | -8.615850e-47 |
Msa1410390 | Msa1426570 | 0.815146 | 1.073573e-51 | -8.615850e-47 |
Msa1410390 | Msa1426910 | 0.813126 | 2.997488e-51 | -8.615850e-47 |
Msa1410390 | Msa1432480 | 0.802845 | 4.623651e-49 | -8.615850e-47 |
Msa1410390 | Msa1442790 | 0.809694 | 1.667387e-50 | -8.615850e-47 |
Msa1410390 | Msa1444120 | 0.817428 | 3.314304e-52 | -8.615850e-47 |
Msa1410390 | Msa1445940 | 0.810763 | 9.805568e-51 | -8.615850e-47 |
Msa1410390 | Msa1446080 | 0.804964 | 1.677198e-49 | -8.615850e-47 |
Msa1410390 | Msa1447150 | 0.818757 | 1.659460e-52 | -8.615850e-47 |
Msa1410390 | Msa1450720 | 0.813150 | 2.960423e-51 | -8.615850e-47 |
Msa1410390 | Msa1451150 | 0.819607 | 1.062462e-52 | -8.615850e-47 |
Msa1410390 | Msa1454960 | 0.801301 | 9.606891e-49 | -8.615850e-47 |
Msa1410390 | Msa1456230 | 0.812633 | 3.843008e-51 | -8.615850e-47 |
Msa1410390 | Msa1458030 | 0.802705 | 4.942883e-49 | -8.615850e-47 |
Msa1410390 | Msa1458610 | 0.817559 | 3.096836e-52 | -8.615850e-47 |
Msa1410390 | Msa1465570 | 0.817710 | 2.863328e-52 | -8.615850e-47 |
Msa0620230 | Msa1410390 | 0.812760 | 3.605688e-51 | -8.615850e-47 |
Msa0621600 | Msa1410390 | 0.805009 | 1.641569e-49 | -8.615850e-47 |
Msa0621650 | Msa1410390 | 0.806544 | 7.813112e-50 | -8.615850e-47 |
Msa0621840 | Msa1410390 | 0.901969 | 1.563477e-78 | -8.615850e-47 |
Msa0628420 | Msa1410390 | 0.828670 | 7.901918e-55 | -8.615850e-47 |
Msa0628500 | Msa1410390 | 0.834921 | 2.266178e-56 | -8.615850e-47 |
Msa0640940 | Msa1410390 | 0.827030 | 1.959355e-54 | -8.615850e-47 |
Msa0641730 | Msa1410390 | 0.809386 | 1.941016e-50 | -8.615850e-47 |
Msa0662630 | Msa1410390 | 0.801180 | 1.017048e-48 | -8.615850e-47 |
Msa0679100 | Msa1410390 | 0.825268 | 5.143649e-54 | -8.615850e-47 |
Msa0679360 | Msa1410390 | 0.826177 | 3.129736e-54 | -8.615850e-47 |
Msa0689420 | Msa1410390 | 0.809113 | 2.221517e-50 | -8.615850e-47 |
Msa0689760 | Msa1410390 | 0.810507 | 1.113721e-50 | -8.615850e-47 |
Msa0695130 | Msa1410390 | 0.803553 | 3.299245e-49 | -8.615850e-47 |
Msa0697720 | Msa1410390 | 0.824536 | 7.655035e-54 | -8.615850e-47 |
Msa0716860 | Msa1410390 | 0.814572 | 1.438923e-51 | -8.615850e-47 |
Msa0721280 | Msa1410390 | 0.816083 | 6.639159e-52 | -8.615850e-47 |
Msa0732600 | Msa1410390 | 0.813371 | 2.648500e-51 | -8.615850e-47 |
Msa0743530 | Msa1410390 | 0.822166 | 2.739235e-53 | -8.615850e-47 |
Msa0773590 | Msa1410390 | 0.810103 | 1.361521e-50 | -8.615850e-47 |
Msa0789560 | Msa1410390 | 0.826228 | 3.044545e-54 | -8.615850e-47 |
Msa0811040 | Msa1410390 | 0.812951 | 3.274431e-51 | -8.615850e-47 |
Msa0820890 | Msa1410390 | 0.806601 | 7.598645e-50 | -8.615850e-47 |
Msa0822180 | Msa1410390 | 0.801103 | 1.054300e-48 | -8.615850e-47 |
Msa0829220 | Msa1410390 | 0.810560 | 1.084609e-50 | -8.615850e-47 |
Msa0835280 | Msa1410390 | 0.801152 | 1.030127e-48 | -8.615850e-47 |
Msa0836500 | Msa1410390 | 0.806240 | 9.056344e-50 | -8.615850e-47 |
Msa0123510 | Msa1410390 | 0.802568 | 5.275529e-49 | -8.615850e-47 |
Msa0131290 | Msa1410390 | 0.808667 | 2.766880e-50 | -8.615850e-47 |
Msa0136120 | Msa1410390 | 0.832129 | 1.127626e-55 | -8.615850e-47 |
Msa0138210 | Msa1410390 | 0.817856 | 2.654790e-52 | -8.615850e-47 |
Msa0144780 | Msa1410390 | 0.815393 | 9.457984e-52 | -8.615850e-47 |
Msa0147980 | Msa1410390 | 0.811876 | 5.621333e-51 | -8.615850e-47 |
Msa0177170 | Msa1410390 | 0.822308 | 2.539415e-53 | -8.615850e-47 |
Msa0183420 | Msa1410390 | 0.819420 | 1.172142e-52 | -8.615850e-47 |
Msa0192640 | Msa1410390 | 0.814524 | 1.474577e-51 | -8.615850e-47 |
Msa0217670 | Msa1410390 | 0.802659 | 5.050330e-49 | -8.615850e-47 |
Msa0223330 | Msa1410390 | 0.806692 | 7.269257e-50 | -8.615850e-47 |
Msa0232340 | Msa1410390 | 0.801807 | 7.562583e-49 | -8.615850e-47 |
Msa0236770 | Msa1410390 | 0.832290 | 1.028369e-55 | -8.615850e-47 |
Msa0237200 | Msa1410390 | 0.828328 | 9.557561e-55 | -8.615850e-47 |
Msa1227320 | Msa1410390 | 0.810571 | 1.078741e-50 | -8.615850e-47 |
Msa1233850 | Msa1410390 | 0.826923 | 2.078441e-54 | -8.615850e-47 |
Msa1250530 | Msa1410390 | 0.815509 | 8.916142e-52 | -8.615850e-47 |
Msa1259640 | Msa1410390 | 0.846684 | 1.860337e-59 | -8.615850e-47 |
Msa1261070 | Msa1410390 | 0.816525 | 5.287438e-52 | -8.615850e-47 |
Msa1266020 | Msa1410390 | 0.938008 | 1.366827e-98 | -8.615850e-47 |
Msa1270660 | Msa1410390 | 0.809584 | 1.760602e-50 | -8.615850e-47 |
Msa1276150 | Msa1410390 | 0.820450 | 6.815050e-53 | -8.615850e-47 |
Msa1293400 | Msa1410390 | 0.819158 | 1.344793e-52 | -8.615850e-47 |
Msa1297530 | Msa1410390 | 0.826368 | 2.819639e-54 | -8.615850e-47 |
Msa1299330 | Msa1410390 | 0.823000 | 1.752649e-53 | -8.615850e-47 |
Msa1320820 | Msa1410390 | 0.848129 | 7.462202e-60 | -8.615850e-47 |
Msa1329450 | Msa1410390 | 0.801407 | 9.136134e-49 | -8.615850e-47 |
Msa1329790 | Msa1410390 | 0.841282 | 5.222336e-58 | -8.615850e-47 |
Msa1336040 | Msa1410390 | 0.842643 | 2.281798e-58 | -8.615850e-47 |
Msa1337170 | Msa1410390 | 0.817303 | 3.536348e-52 | -8.615850e-47 |
Msa1341490 | Msa1410390 | 0.825663 | 4.145234e-54 | -8.615850e-47 |
Msa1344310 | Msa1410390 | 0.820618 | 6.236807e-53 | -8.615850e-47 |
Msa0376280 | Msa1410390 | 0.804049 | 2.603572e-49 | -8.615850e-47 |
Msa0377440 | Msa1410390 | 0.811906 | 5.539380e-51 | -8.615850e-47 |
Msa0377450 | Msa1410390 | 0.810790 | 9.675896e-51 | -8.615850e-47 |
Msa0381000 | Msa1410390 | 0.824770 | 6.741382e-54 | -8.615850e-47 |
Msa0381080 | Msa1410390 | 0.828295 | 9.735847e-55 | -8.615850e-47 |
Msa0384670 | Msa1410390 | 0.804212 | 2.407899e-49 | -8.615850e-47 |
Msa0387810 | Msa1410390 | 0.830200 | 3.357088e-55 | -8.615850e-47 |
Msa0390960 | Msa1410390 | 0.831998 | 1.214535e-55 | -8.615850e-47 |
Msa0394690 | Msa1410390 | 0.827639 | 1.400064e-54 | -8.615850e-47 |
Msa0395980 | Msa1410390 | 0.836451 | 9.286156e-57 | -8.615850e-47 |
Msa0416960 | Msa1410390 | 0.801733 | 7.833803e-49 | -8.615850e-47 |
Msa0427040 | Msa1410390 | 0.817266 | 3.605370e-52 | -8.615850e-47 |
Msa0430870 | Msa1410390 | 0.804828 | 1.791027e-49 | -8.615850e-47 |
Msa0432500 | Msa1410390 | 0.804544 | 2.052538e-49 | -8.615850e-47 |
Msa0434570 | Msa1410390 | 0.811635 | 6.344776e-51 | -8.615850e-47 |
Msa0434770 | Msa1410390 | 0.807752 | 4.335148e-50 | -8.615850e-47 |
Msa0440510 | Msa1410390 | 0.829842 | 4.104825e-55 | -8.615850e-47 |
Msa0442270 | Msa1410390 | 0.803247 | 3.818166e-49 | -8.615850e-47 |
Msa0443430 | Msa1410390 | 0.837816 | 4.158649e-57 | -8.615850e-47 |
Msa0446900 | Msa1410390 | 0.821527 | 3.849975e-53 | -8.615850e-47 |
Msa0473330 | Msa1410390 | 0.812066 | 5.109843e-51 | -8.615850e-47 |
Msa0473980 | Msa1410390 | 0.817534 | 3.137260e-52 | -8.615850e-47 |
Msa0482040 | Msa1410390 | 0.821817 | 3.300543e-53 | -8.615850e-47 |
Msa0981310 | Msa1410390 | 0.832553 | 8.851385e-56 | -8.615850e-47 |
Msa0982240 | Msa1410390 | 0.805209 | 1.490511e-49 | -8.615850e-47 |
Msa0992580 | Msa1410390 | 0.801913 | 7.195676e-49 | -8.615850e-47 |
Msa0998590 | Msa1410390 | 0.813260 | 2.800571e-51 | -8.615850e-47 |
Msa1009750 | Msa1410390 | 0.803070 | 4.155366e-49 | -8.615850e-47 |
Msa1010460 | Msa1410390 | 0.835408 | 1.707496e-56 | -8.615850e-47 |
Msa1027250 | Msa1410390 | 0.812652 | 3.807029e-51 | -8.615850e-47 |
Msa1027300 | Msa1410390 | 0.814326 | 1.630633e-51 | -8.615850e-47 |
Msa1027360 | Msa1410390 | 0.815341 | 9.716115e-52 | -8.615850e-47 |
Msa1032170 | Msa1410390 | 0.807144 | 5.833329e-50 | -8.615850e-47 |
Msa1033150 | Msa1410390 | 0.802123 | 6.512834e-49 | -8.615850e-47 |
Msa1033210 | Msa1410390 | 0.807876 | 4.080160e-50 | -8.615850e-47 |
Msa1036300 | Msa1410390 | 0.814042 | 1.884135e-51 | -8.615850e-47 |
Msa1036740 | Msa1410390 | 0.801816 | 7.531709e-49 | -8.615850e-47 |
Msa1037520 | Msa1410390 | 0.818459 | 1.938475e-52 | -8.615850e-47 |
Msa1040520 | Msa1410390 | 0.819921 | 9.010778e-53 | -8.615850e-47 |
Msa1072700 | Msa1410390 | 0.801169 | 1.022085e-48 | -8.615850e-47 |
Msa1077070 | Msa1410390 | 0.808223 | 3.441286e-50 | -8.615850e-47 |
Msa1080270 | Msa1410390 | 0.800247 | 1.576563e-48 | -8.615850e-47 |
Msa1087480 | Msa1410390 | 0.802395 | 5.725354e-49 | -8.615850e-47 |
Msa1096550 | Msa1410390 | 0.803965 | 2.709375e-49 | -8.615850e-47 |
Msa1097820 | Msa1410390 | 0.806110 | 9.645085e-50 | -8.615850e-47 |
Msa0244970 | Msa1410390 | 0.809600 | 1.746644e-50 | -8.615850e-47 |
Msa0244980 | Msa1410390 | 0.822631 | 2.135828e-53 | -8.615850e-47 |
Msa0249310 | Msa1410390 | 0.805600 | 1.234343e-49 | -8.615850e-47 |
Msa0257490 | Msa1410390 | 0.801688 | 8.003137e-49 | -8.615850e-47 |
Msa0271790 | Msa1410390 | 0.812398 | 4.325387e-51 | -8.615850e-47 |
Msa0274970 | Msa1410390 | 0.823328 | 1.469827e-53 | -8.615850e-47 |
Msa0277420 | Msa1410390 | 0.819299 | 1.249076e-52 | -8.615850e-47 |
Msa0283420 | Msa1410390 | 0.822940 | 1.809917e-53 | -8.615850e-47 |
Msa0287790 | Msa1410390 | 0.808420 | 3.124007e-50 | -8.615850e-47 |
Msa0296790 | Msa1410390 | 0.829599 | 4.703574e-55 | -8.615850e-47 |
Msa0301810 | Msa1410390 | 0.803889 | 2.810460e-49 | -8.615850e-47 |
Msa0310430 | Msa1410390 | 0.837754 | 4.313698e-57 | -8.615850e-47 |
Msa0311720 | Msa1410390 | 0.805361 | 1.385307e-49 | -8.615850e-47 |
Msa0312910 | Msa1410390 | 0.802083 | 6.638919e-49 | -8.615850e-47 |
Msa0315680 | Msa1410390 | 0.821657 | 3.593643e-53 | -8.615850e-47 |
Msa0321690 | Msa1410390 | 0.815207 | 1.040469e-51 | -8.615850e-47 |
Msa0339910 | Msa1410390 | 0.806176 | 9.341352e-50 | -8.615850e-47 |
Msa0342290 | Msa1410390 | 0.830699 | 2.534406e-55 | -8.615850e-47 |
Msa0343190 | Msa1410390 | 0.805108 | 1.564992e-49 | -8.615850e-47 |
Msa0347990 | Msa1410390 | 0.803649 | 3.152609e-49 | -8.615850e-47 |
Msa0362890 | Msa1410390 | 0.809144 | 2.187885e-50 | -8.615850e-47 |
Msa0363060 | Msa1410390 | 0.842150 | 3.082151e-58 | -8.615850e-47 |
Msa0363640 | Msa1410390 | 0.818310 | 2.095977e-52 | -8.615850e-47 |
Msa1113590 | Msa1410390 | 0.811517 | 6.728940e-51 | -8.615850e-47 |
Msa1122780 | Msa1410390 | 0.807400 | 5.149348e-50 | -8.615850e-47 |
Msa1123350 | Msa1410390 | 0.800140 | 1.657206e-48 | -8.615850e-47 |
Msa1127430 | Msa1410390 | 0.831521 | 1.592693e-55 | -8.615850e-47 |
Msa1127770 | Msa1410390 | 0.803020 | 4.255116e-49 | -8.615850e-47 |
Msa1130530 | Msa1410390 | 0.821392 | 4.137406e-53 | -8.615850e-47 |
Msa1131490 | Msa1410390 | 0.825609 | 4.269045e-54 | -8.615850e-47 |
Msa1154490 | Msa1410390 | 0.813403 | 2.605892e-51 | -8.615850e-47 |
Msa1163870 | Msa1410390 | 0.804785 | 1.828688e-49 | -8.615850e-47 |
Msa1168550 | Msa1410390 | 0.807329 | 5.329809e-50 | -8.615850e-47 |
Msa1168590 | Msa1410390 | 0.811104 | 8.271577e-51 | -8.615850e-47 |
Msa1174850 | Msa1410390 | 0.832170 | 1.101018e-55 | -8.615850e-47 |
Msa1178580 | Msa1410390 | 0.821970 | 3.041871e-53 | -8.615850e-47 |
Msa1204830 | Msa1410390 | 0.805247 | 1.463962e-49 | -8.615850e-47 |
Msa1205480 | Msa1410390 | 0.817649 | 2.956255e-52 | -8.615850e-47 |
Msa1205590 | Msa1410390 | 0.843597 | 1.270971e-58 | -8.615850e-47 |
Msa1206650 | Msa1410390 | 0.818290 | 2.117911e-52 | -8.615850e-47 |
Msa1207740 | Msa1410390 | 0.800909 | 1.154916e-48 | -8.615850e-47 |
Msa1208790 | Msa1410390 | 0.809178 | 2.151112e-50 | -8.615850e-47 |
Msa1209670 | Msa1410390 | 0.827747 | 1.319001e-54 | -8.615850e-47 |
Msa1211340 | Msa1410390 | 0.846825 | 1.702214e-59 | -8.615850e-47 |
Msa1214320 | Msa1410390 | 0.830793 | 2.403695e-55 | -8.615850e-47 |
Msa0482940 | Msa1410390 | 0.812111 | 4.997847e-51 | -8.615850e-47 |
Msa0484740 | Msa1410390 | 0.829720 | 4.394951e-55 | -8.615850e-47 |
Msa0489660 | Msa1410390 | 0.808967 | 2.387177e-50 | -8.615850e-47 |
Msa0491000 | Msa1410390 | 0.846846 | 1.680234e-59 | -8.615850e-47 |
Msa0506830 | Msa1410390 | 0.809007 | 2.341212e-50 | -8.615850e-47 |
Msa0511770 | Msa1410390 | 0.800379 | 1.481417e-48 | -8.615850e-47 |
Msa0516120 | Msa1410390 | 0.806406 | 8.355499e-50 | -8.615850e-47 |
Msa0517640 | Msa1410390 | 0.805025 | 1.628716e-49 | -8.615850e-47 |
Msa0526940 | Msa1410390 | 0.814760 | 1.307237e-51 | -8.615850e-47 |
Msa0530710 | Msa1410390 | 0.803314 | 3.697984e-49 | -8.615850e-47 |
Msa0531250 | Msa1410390 | 0.826929 | 2.070840e-54 | -8.615850e-47 |
Msa0542290 | Msa1410390 | 0.810020 | 1.418505e-50 | -8.615850e-47 |
Msa0547990 | Msa1410390 | 0.805178 | 1.513159e-49 | -8.615850e-47 |
Msa0555640 | Msa1410390 | 0.825184 | 5.382059e-54 | -8.615850e-47 |
Msa0566350 | Msa1410390 | 0.803382 | 3.581047e-49 | -8.615850e-47 |
Msa0577200 | Msa1410390 | -0.802041 | 6.771283e-49 | -8.615850e-47 |
Msa0580180 | Msa1410390 | 0.824185 | 9.256239e-54 | -8.615850e-47 |
Msa0580640 | Msa1410390 | 0.822335 | 2.502640e-53 | -8.615850e-47 |
Msa0588090 | Msa1410390 | 0.810623 | 1.051362e-50 | -8.615850e-47 |
Msa0588120 | Msa1410390 | 0.819906 | 9.078927e-53 | -8.615850e-47 |
Msa0588220 | Msa1410390 | 0.833215 | 6.060766e-56 | -8.615850e-47 |
Msa0600450 | Msa1410390 | 0.827480 | 1.528726e-54 | -8.615850e-47 |
Msa0842770 | Msa1410390 | 0.805081 | 1.585704e-49 | -8.615850e-47 |
Msa0866400 | Msa1410390 | 0.839701 | 1.354083e-57 | -8.615850e-47 |
Msa0866410 | Msa1410390 | 0.829346 | 5.419466e-55 | -8.615850e-47 |
Msa0870650 | Msa1410390 | 0.806902 | 6.563401e-50 | -8.615850e-47 |
Msa0880450 | Msa1410390 | 0.817342 | 3.465169e-52 | -8.615850e-47 |
Msa0898660 | Msa1410390 | 0.808644 | 2.798771e-50 | -8.615850e-47 |
Msa0903780 | Msa1410390 | 0.807125 | 5.889651e-50 | -8.615850e-47 |
Msa0932350 | Msa1410390 | 0.803672 | 3.117711e-49 | -8.615850e-47 |
Msa0957870 | Msa1410390 | 0.809217 | 2.110667e-50 | -8.615850e-47 |
Msa0957970 | Msa1410390 | 0.808267 | 3.368280e-50 | -8.615850e-47 |
Msa0958030 | Msa1410390 | 0.812363 | 4.402813e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1410390 | MtrunA17_Chr4g0071051 | 87.943 | 423 | 7 | 3 | 1 | 380 | 1 | 422 | 0.0 | 741 |
Msa1410390 | MtrunA17_Chr3g0135831 | 34.085 | 355 | 164 | 11 | 76 | 378 | 37 | 373 | 5.90e-50 | 172 |
Msa1410390 | MtrunA17_Chr7g0260331 | 40.909 | 242 | 106 | 5 | 76 | 280 | 40 | 281 | 1.45e-48 | 168 |
Msa1410390 | MtrunA17_Chr1g0204741 | 39.184 | 245 | 108 | 6 | 56 | 264 | 11 | 250 | 1.33e-47 | 164 |
Msa1410390 | MtrunA17_Chr5g0410881 | 42.051 | 195 | 73 | 3 | 82 | 236 | 29 | 223 | 1.71e-42 | 155 |
Msa1410390 | MtrunA17_Chr4g0039891 | 40.845 | 213 | 84 | 5 | 84 | 257 | 11 | 220 | 2.37e-39 | 146 |
Msa1410390 | MtrunA17_Chr1g0185131 | 37.500 | 232 | 102 | 5 | 68 | 263 | 7 | 231 | 6.97e-38 | 139 |
Msa1410390 | MtrunA17_Chr8g0379701 | 36.364 | 198 | 90 | 3 | 84 | 245 | 11 | 208 | 1.51e-32 | 126 |
Msa1410390 | MtrunA17_Chr2g0330821 | 29.537 | 281 | 152 | 6 | 14 | 260 | 8 | 276 | 7.66e-29 | 115 |
Msa1410390 | MtrunA17_Chr6g0467041 | 33.054 | 239 | 111 | 6 | 85 | 294 | 22 | 240 | 4.57e-28 | 112 |
Msa1410390 | MtrunA17_Chr8g0378061 | 35.714 | 182 | 87 | 3 | 86 | 238 | 23 | 203 | 1.01e-26 | 110 |
Msa1410390 | MtrunA17_Chr1g0179321 | 67.213 | 61 | 20 | 0 | 84 | 144 | 48 | 108 | 9.27e-26 | 100 |
Msa1410390 | MtrunA17_Chr6g0485571 | 33.684 | 190 | 95 | 4 | 85 | 244 | 11 | 199 | 1.22e-24 | 103 |
Msa1410390 | MtrunA17_Chr8g0392001 | 37.696 | 191 | 79 | 4 | 85 | 235 | 22 | 212 | 2.35e-24 | 102 |
Msa1410390 | MtrunA17_Chr5g0402291 | 62.687 | 67 | 25 | 0 | 82 | 148 | 6 | 72 | 3.90e-24 | 100 |
Msa1410390 | MtrunA17_Chr2g0284481 | 36.216 | 185 | 82 | 4 | 84 | 232 | 14 | 198 | 6.18e-24 | 102 |
Msa1410390 | MtrunA17_Chr3g0134031 | 55.696 | 79 | 35 | 0 | 70 | 148 | 9 | 87 | 8.83e-23 | 98.6 |
Msa1410390 | MtrunA17_Chr8g0375041 | 57.971 | 69 | 29 | 0 | 80 | 148 | 4 | 72 | 1.16e-22 | 95.9 |
Msa1410390 | MtrunA17_Chr7g0257331 | 53.086 | 81 | 34 | 1 | 72 | 148 | 5 | 85 | 1.19e-22 | 95.5 |
Msa1410390 | MtrunA17_Chr5g0397881 | 59.091 | 66 | 27 | 0 | 83 | 148 | 22 | 87 | 5.40e-22 | 95.9 |
Msa1410390 | MtrunA17_Chr5g0441531 | 60.606 | 66 | 26 | 0 | 83 | 148 | 23 | 88 | 1.30e-21 | 93.2 |
Msa1410390 | MtrunA17_Chr1g0203601 | 54.545 | 66 | 30 | 0 | 83 | 148 | 16 | 81 | 2.53e-20 | 90.5 |
Msa1410390 | MtrunA17_Chr4g0023771 | 59.420 | 69 | 27 | 1 | 77 | 144 | 7 | 75 | 3.86e-20 | 85.1 |
Msa1410390 | MtrunA17_Chr6g0472421 | 54.545 | 66 | 30 | 0 | 83 | 148 | 31 | 96 | 1.18e-19 | 89.0 |
Msa1410390 | MtrunA17_Chr4g0047421 | 55.556 | 72 | 28 | 1 | 83 | 150 | 31 | 102 | 4.48e-19 | 84.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1410390 | AT2G26150.1 | 33.634 | 333 | 140 | 9 | 76 | 368 | 35 | 326 | 7.42e-48 | 166 |
Msa1410390 | AT2G26150.4 | 33.634 | 333 | 140 | 9 | 76 | 368 | 35 | 326 | 7.42e-48 | 166 |
Msa1410390 | AT5G54070.1 | 42.857 | 231 | 104 | 7 | 78 | 281 | 63 | 292 | 4.07e-47 | 164 |
Msa1410390 | AT3G22830.1 | 38.528 | 231 | 100 | 5 | 76 | 265 | 52 | 281 | 5.20e-46 | 162 |
Msa1410390 | AT3G51910.1 | 42.929 | 198 | 93 | 6 | 76 | 254 | 20 | 216 | 1.88e-42 | 149 |
Msa1410390 | AT5G16820.1 | 40.816 | 196 | 78 | 3 | 84 | 241 | 26 | 221 | 8.81e-41 | 150 |
Msa1410390 | AT5G16820.2 | 40.816 | 196 | 78 | 3 | 84 | 241 | 26 | 221 | 8.81e-41 | 150 |
Msa1410390 | AT4G17750.1 | 40.566 | 212 | 74 | 4 | 83 | 247 | 50 | 256 | 1.59e-39 | 147 |
Msa1410390 | AT1G32330.2 | 37.333 | 225 | 99 | 4 | 78 | 260 | 30 | 254 | 9.40e-38 | 142 |
Msa1410390 | AT1G32330.1 | 37.333 | 225 | 99 | 4 | 78 | 260 | 30 | 254 | 9.51e-38 | 142 |
Msa1410390 | AT3G02990.1 | 40.000 | 190 | 77 | 3 | 84 | 236 | 22 | 211 | 3.89e-37 | 140 |
Msa1410390 | AT3G63350.1 | 34.274 | 248 | 127 | 4 | 76 | 288 | 19 | 265 | 6.15e-37 | 135 |
Msa1410390 | AT5G03720.2 | 37.895 | 190 | 86 | 5 | 84 | 241 | 54 | 243 | 3.20e-32 | 125 |
Msa1410390 | AT5G03720.1 | 37.895 | 190 | 86 | 5 | 84 | 241 | 54 | 243 | 3.20e-32 | 125 |
Msa1410390 | AT5G43840.1 | 36.702 | 188 | 96 | 4 | 76 | 240 | 10 | 197 | 5.08e-32 | 122 |
Msa1410390 | AT4G13980.1 | 34.973 | 183 | 90 | 2 | 86 | 239 | 24 | 206 | 4.39e-28 | 115 |
Msa1410390 | AT1G67970.1 | 36.757 | 185 | 83 | 4 | 85 | 235 | 19 | 203 | 5.87e-28 | 113 |
Msa1410390 | AT3G24520.1 | 32.584 | 178 | 110 | 3 | 85 | 252 | 17 | 194 | 6.59e-24 | 101 |
Msa1410390 | AT4G36990.1 | 62.121 | 66 | 25 | 0 | 83 | 148 | 12 | 77 | 6.19e-23 | 97.8 |
Msa1410390 | AT4G11660.1 | 59.091 | 66 | 27 | 0 | 83 | 148 | 57 | 122 | 8.26e-22 | 96.3 |
Msa1410390 | AT2G41690.1 | 59.091 | 66 | 27 | 0 | 83 | 148 | 38 | 103 | 1.41e-21 | 93.2 |
Msa1410390 | AT1G46264.1 | 55.263 | 76 | 34 | 0 | 73 | 148 | 22 | 97 | 1.69e-21 | 94.7 |
Msa1410390 | AT5G62020.1 | 57.576 | 66 | 28 | 0 | 83 | 148 | 21 | 86 | 8.04e-21 | 92.0 |
Msa1410390 | AT5G45710.3 | 33.333 | 177 | 85 | 2 | 84 | 227 | 12 | 188 | 7.52e-20 | 90.1 |
Msa1410390 | AT5G45710.1 | 33.333 | 177 | 85 | 2 | 84 | 227 | 12 | 188 | 7.52e-20 | 90.1 |
Msa1410390 | AT4G18880.1 | 36.216 | 185 | 84 | 4 | 77 | 227 | 7 | 191 | 1.02e-19 | 90.5 |
Msa1410390 | AT2G26150.3 | 24.731 | 279 | 147 | 11 | 111 | 368 | 35 | 271 | 8.66e-11 | 62.8 |
Msa1410390 | AT2G26150.2 | 24.731 | 279 | 147 | 11 | 111 | 368 | 35 | 271 | 8.66e-11 | 62.8 |
Find 72 sgRNAs with CRISPR-Local
Find 193 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCCAAAAGGCCATTGTTTA+TGG | 0.168710 | tig0023654:+33745 | Msa1410390:CDS |
GTATTTAGGAAGAAGAATTT+TGG | 0.245282 | tig0023654:-31893 | None:intergenic |
GAAACAATCGGGTCAGTTTC+CGG | 0.255207 | tig0023654:-31820 | None:intergenic |
AGATCAGAACATGTTGAAAT+TGG | 0.272987 | tig0023654:+33604 | Msa1410390:CDS |
CTCCATAAACAATGGCCTTT+TGG | 0.280439 | tig0023654:-33747 | None:intergenic |
TTATTATGCTTAAAGTATTT+AGG | 0.297550 | tig0023654:-31907 | None:intergenic |
TAATATCTATCTTGAATTAG+AGG | 0.304710 | tig0023654:+34132 | Msa1410390:CDS |
TGTTATGTCAGAGAAGCTTT+TGG | 0.350236 | tig0023654:+34066 | Msa1410390:CDS |
GATAAGTAAGCCAACAGATT+GGG | 0.381656 | tig0023654:+34159 | Msa1410390:CDS |
CCTTGTGTTCCAAGCAATCT+AGG | 0.385680 | tig0023654:-33833 | None:intergenic |
TTCTGTTGTTGATGAAGAAA+TGG | 0.389880 | tig0023654:+34096 | Msa1410390:CDS |
TATTCAACTCACAAATGTTC+AGG | 0.406470 | tig0023654:+33664 | Msa1410390:CDS |
TAATGTTGATTATAGGAGTC+AGG | 0.409936 | tig0023654:+33859 | Msa1410390:CDS |
CAAATGTTCAGGAGCGAGTT+CGG | 0.410264 | tig0023654:+33675 | Msa1410390:CDS |
AAACTGACCCGATTGTTTCA+TGG | 0.421449 | tig0023654:+31824 | Msa1410390:CDS |
TGGATCTGCTAGTGGATTGG+TGG | 0.433958 | tig0023654:+34183 | Msa1410390:CDS |
GGTGGTTACGACGGTGAAAT+CGG | 0.435742 | tig0023654:+31502 | Msa1410390:CDS |
TAGCTCTTTACATGACTTGA+GGG | 0.437021 | tig0023654:+33994 | Msa1410390:CDS |
GTTTGAAATGGTGGAGGATC+CGG | 0.440036 | tig0023654:+31801 | Msa1410390:CDS |
GTTAAAAGACCTAGATTGCT+TGG | 0.444562 | tig0023654:+33824 | Msa1410390:CDS |
AAGGTACTAATGTTGATTAT+AGG | 0.444857 | tig0023654:+33852 | Msa1410390:CDS |
AAATATGAACACTGGTAGAA+TGG | 0.455673 | tig0023654:+33934 | Msa1410390:CDS |
GAAGCACTCCATGAAACAAT+CGG | 0.466108 | tig0023654:-31832 | None:intergenic |
TCTCAAGAAGACGTTTGAAA+TGG | 0.467110 | tig0023654:+31789 | Msa1410390:CDS |
TGATAAGTAAGCCAACAGAT+TGG | 0.468059 | tig0023654:+34158 | Msa1410390:CDS |
TCCTCACCAAAATGGCCAAA+AGG | 0.470362 | tig0023654:+33732 | Msa1410390:CDS |
TCTTCCATGGGAGTAGAAAC+AGG | 0.475802 | tig0023654:-33962 | None:intergenic |
GACTTACATAGGTGTTGAGC+TGG | 0.485810 | tig0023654:-31948 | None:intergenic |
ATTTGTTGAAGAACATAAGA+AGG | 0.488953 | tig0023654:+33498 | Msa1410390:intron |
GCACTGTCGTTGAATAACTC+TGG | 0.499469 | tig0023654:-31559 | None:intergenic |
GGGTGGATCTGCTAGTGGAT+TGG | 0.502731 | tig0023654:+34180 | Msa1410390:CDS |
ATTCAAAAGATTAAGCGAAA+AGG | 0.508398 | tig0023654:+33776 | Msa1410390:CDS |
TTACATGACTTGAGGGCTTG+TGG | 0.510182 | tig0023654:+34001 | Msa1410390:CDS |
AACAAAATGGCGGTGGCACA+CGG | 0.510707 | tig0023654:+31481 | None:intergenic |
ACTTTGCAATCTGAATTGAA+TGG | 0.510922 | tig0023654:+33899 | Msa1410390:CDS |
CAAGAAGACGTTTGAAATGG+TGG | 0.512314 | tig0023654:+31792 | Msa1410390:CDS |
GTTTCTACTCCCATGGAAGA+TGG | 0.512936 | tig0023654:+33965 | Msa1410390:CDS |
CGCAATTCATATCAAAGAAG+AGG | 0.515252 | tig0023654:+31678 | Msa1410390:CDS |
GTAGCTCTTTACATGACTTG+AGG | 0.518635 | tig0023654:+33993 | Msa1410390:CDS |
TCAAACGTCTTCTTGAGAAA+CGG | 0.525722 | tig0023654:-31784 | None:intergenic |
AATTGGAAATTCTGAAGCTA+AGG | 0.526195 | tig0023654:+33621 | Msa1410390:CDS |
TTCGGTTGAAACGTCGTCGT+AGG | 0.530109 | tig0023654:-31599 | None:intergenic |
GCTACACAGTCCATCTTCCA+TGG | 0.535967 | tig0023654:-33975 | None:intergenic |
GGATCTGCTAGTGGATTGGT+GGG | 0.540365 | tig0023654:+34184 | Msa1410390:CDS |
ACCACCTGTTTCTACTCCCA+TGG | 0.552610 | tig0023654:+33958 | Msa1410390:CDS |
TCCACTTCAGATTCAACGCA+AGG | 0.559576 | tig0023654:-33569 | None:intergenic |
CCTAGATTGCTTGGAACACA+AGG | 0.567220 | tig0023654:+33833 | Msa1410390:CDS |
ACAAATAAACAAAATGGCGG+TGG | 0.567551 | tig0023654:+31474 | None:intergenic |
ATAAGTAAGCCAACAGATTG+GGG | 0.574399 | tig0023654:+34160 | Msa1410390:CDS |
AAGCACTCCATGAAACAATC+GGG | 0.577813 | tig0023654:-31831 | None:intergenic |
AAGTATAACAAACTGCATCA+AGG | 0.578236 | tig0023654:+33527 | Msa1410390:CDS |
AATGTTGATTATAGGAGTCA+GGG | 0.582952 | tig0023654:+33860 | Msa1410390:CDS |
TTTCCTGAAAATATGAACAC+TGG | 0.585214 | tig0023654:+33926 | Msa1410390:CDS |
GCAGATCCACCCCAATCTGT+TGG | 0.588399 | tig0023654:-34169 | None:intergenic |
GTCTTCTTGAGAAACGGTGG+TGG | 0.589533 | tig0023654:-31778 | None:intergenic |
ATGGAAGGGTTACATGAGGT+TGG | 0.601818 | tig0023654:+31754 | Msa1410390:intron |
TCCTTGCGTTGAATCTGAAG+TGG | 0.604555 | tig0023654:+33568 | Msa1410390:CDS |
GAAGAGGTTCTTGAAGAAGA+CGG | 0.609483 | tig0023654:+31694 | Msa1410390:CDS |
CTACACAGTCCATCTTCCAT+GGG | 0.610941 | tig0023654:-33974 | None:intergenic |
ATTATCTGCTCCATAAACAA+TGG | 0.622243 | tig0023654:-33755 | None:intergenic |
GATTGGGGTGGATCTGCTAG+TGG | 0.632406 | tig0023654:+34175 | Msa1410390:CDS |
GAAGACGTTTGAAATGGTGG+AGG | 0.633963 | tig0023654:+31795 | Msa1410390:CDS |
CATGACTTGAGGGCTTGTGG+TGG | 0.643012 | tig0023654:+34004 | Msa1410390:CDS |
GTGGCACACGGTGGTTACGA+CGG | 0.645161 | tig0023654:+31493 | Msa1410390:CDS |
AACGTCTTCTTGAGAAACGG+TGG | 0.656391 | tig0023654:-31781 | None:intergenic |
AGTAAGCCAACAGATTGGGG+TGG | 0.660771 | tig0023654:+34163 | Msa1410390:CDS |
ACCAATGGAAGGGTTACATG+AGG | 0.667282 | tig0023654:+31750 | Msa1410390:intron |
GGTTACGACGGTGAAATCGG+TGG | 0.688203 | tig0023654:+31505 | Msa1410390:CDS |
AGTTGATGCTAATATAGACA+TGG | 0.689403 | tig0023654:+33802 | Msa1410390:CDS |
TATAACAAACTGCATCAAGG+AGG | 0.715319 | tig0023654:+33530 | Msa1410390:CDS |
AAAATGGCGGTGGCACACGG+TGG | 0.747694 | tig0023654:+31484 | None:intergenic |
TCCATGGGAGTAGAAACAGG+TGG | 0.762840 | tig0023654:-33959 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATAAAATGATTCATATTTAT+AGG | + | tig0023654:32134-32153 | Msa1410390:intron | 10.0% |
!! | TAAAATGATTCATATTTATA+GGG | + | tig0023654:32135-32154 | Msa1410390:intron | 10.0% |
!!! | AAGTTTGTTTAATTAATTTT+TGG | + | tig0023654:33043-33062 | Msa1410390:intron | 10.0% |
!!! | TTATTATGCTTAAAGTATTT+AGG | - | tig0023654:31910-31929 | None:intergenic | 15.0% |
!!! | TTTTTTCATGTTTTTTTACA+TGG | - | tig0023654:32436-32455 | None:intergenic | 15.0% |
!!! | GTTAATATTTGGAATATTAT+CGG | + | tig0023654:32969-32988 | Msa1410390:intron | 15.0% |
!!! | AAGCAAAAAAAATTTTTTAG+CGG | + | tig0023654:33368-33387 | Msa1410390:intron | 15.0% |
!!! | AGAATTTTTTTGACTTACAT+AGG | - | tig0023654:31962-31981 | None:intergenic | 20.0% |
!!! | TGTACAATTTAAATCAGTTT+TGG | + | tig0023654:32024-32043 | Msa1410390:intron | 20.0% |
!! | AAATCCAGAATAAATTCAAA+TGG | - | tig0023654:32489-32508 | None:intergenic | 20.0% |
!!! | GCAAAAAACAAAATAGATTT+TGG | - | tig0023654:32568-32587 | None:intergenic | 20.0% |
!! | ATATTCCAAATATTAACATG+CGG | - | tig0023654:32966-32985 | None:intergenic | 20.0% |
!! | TAATATCTATCTTGAATTAG+AGG | + | tig0023654:34132-34151 | Msa1410390:CDS | 20.0% |
!!! | ATAACTCTGGTTTTATTGAT+GGG | - | tig0023654:31549-31568 | None:intergenic | 25.0% |
!!! | AATAACTCTGGTTTTATTGA+TGG | - | tig0023654:31550-31569 | None:intergenic | 25.0% |
!!! | TAGTACTGATTCTTTTCTTT+CGG | - | tig0023654:31620-31639 | None:intergenic | 25.0% |
!! | GTATTTAGGAAGAAGAATTT+TGG | - | tig0023654:31896-31915 | None:intergenic | 25.0% |
!!! | TTACATGAACTCACTTTTAT+AGG | + | tig0023654:32340-32359 | Msa1410390:intron | 25.0% |
! | ACATTAAATTCGAACTTCAT+TGG | + | tig0023654:32381-32400 | Msa1410390:intron | 25.0% |
!!! | TTTTTTGCAACCACAAAAAT+AGG | + | tig0023654:32580-32599 | Msa1410390:intron | 25.0% |
! | TAAATCTCATATTAACACAG+GGG | - | tig0023654:32835-32854 | None:intergenic | 25.0% |
! | GTAAATCTCATATTAACACA+GGG | - | tig0023654:32836-32855 | None:intergenic | 25.0% |
! | TGTAAATCTCATATTAACAC+AGG | - | tig0023654:32837-32856 | None:intergenic | 25.0% |
! | TATTCCAAATATTAACATGC+GGG | - | tig0023654:32965-32984 | None:intergenic | 25.0% |
! | CATGGAAAAATAAATATGAC+AGG | + | tig0023654:33018-33037 | Msa1410390:intron | 25.0% |
!! | CTATTTCTTAAACGTAACTT+GGG | - | tig0023654:33074-33093 | None:intergenic | 25.0% |
!! | TCTATTTCTTAAACGTAACT+TGG | - | tig0023654:33075-33094 | None:intergenic | 25.0% |
! | GAAGAAAAAAGAAAAGAAAG+AGG | - | tig0023654:33242-33261 | None:intergenic | 25.0% |
!! | ATTTGTTGAAGAACATAAGA+AGG | + | tig0023654:33498-33517 | Msa1410390:intron | 25.0% |
! | ATTCAAAAGATTAAGCGAAA+AGG | + | tig0023654:33776-33795 | Msa1410390:CDS | 25.0% |
!! | AAGGTACTAATGTTGATTAT+AGG | + | tig0023654:33852-33871 | Msa1410390:CDS | 25.0% |
!!! | TCGTGATAGTTTTGTTGTTT+GGG | + | tig0023654:31855-31874 | Msa1410390:CDS | 30.0% |
!! | TTAAATCAGTTTTGGCATCA+CGG | + | tig0023654:32032-32051 | Msa1410390:intron | 30.0% |
AAATCAACTCAATGCATGTT+TGG | - | tig0023654:32079-32098 | None:intergenic | 30.0% | |
TTCGCCATTTGAATTTATTC+TGG | + | tig0023654:32482-32501 | Msa1410390:intron | 30.0% | |
GGTAATTTCCCAGAAATAAT+GGG | - | tig0023654:32806-32825 | None:intergenic | 30.0% | |
TGGTAATTTCCCAGAAATAA+TGG | - | tig0023654:32807-32826 | None:intergenic | 30.0% | |
!!! | ATATTAACACAGGGGTATTT+TGG | - | tig0023654:32827-32846 | None:intergenic | 30.0% |
ATATCCCGCATGTTAATATT+TGG | + | tig0023654:32958-32977 | Msa1410390:intron | 30.0% | |
! | GTTTAAGACAAAGAAGAAAC+TGG | + | tig0023654:33103-33122 | Msa1410390:intron | 30.0% |
AAGTATAACAAACTGCATCA+AGG | + | tig0023654:33527-33546 | Msa1410390:CDS | 30.0% | |
AGATCAGAACATGTTGAAAT+TGG | + | tig0023654:33604-33623 | Msa1410390:CDS | 30.0% | |
!! | AATTGGAAATTCTGAAGCTA+AGG | + | tig0023654:33621-33640 | Msa1410390:CDS | 30.0% |
TATTCAACTCACAAATGTTC+AGG | + | tig0023654:33664-33683 | Msa1410390:CDS | 30.0% | |
ATTATCTGCTCCATAAACAA+TGG | - | tig0023654:33758-33777 | None:intergenic | 30.0% | |
! | AGTTGATGCTAATATAGACA+TGG | + | tig0023654:33802-33821 | Msa1410390:CDS | 30.0% |
! | TAATGTTGATTATAGGAGTC+AGG | + | tig0023654:33859-33878 | Msa1410390:CDS | 30.0% |
! | AATGTTGATTATAGGAGTCA+GGG | + | tig0023654:33860-33879 | Msa1410390:CDS | 30.0% |
ACTTTGCAATCTGAATTGAA+TGG | + | tig0023654:33899-33918 | Msa1410390:CDS | 30.0% | |
TTTCCTGAAAATATGAACAC+TGG | + | tig0023654:33926-33945 | Msa1410390:CDS | 30.0% | |
AAATATGAACACTGGTAGAA+TGG | + | tig0023654:33934-33953 | Msa1410390:CDS | 30.0% | |
! | TTCTGTTGTTGATGAAGAAA+TGG | + | tig0023654:34096-34115 | Msa1410390:CDS | 30.0% |
!!! | CTGGTTTTATTGATGGGATT+AGG | - | tig0023654:31543-31562 | None:intergenic | 35.0% |
ACCTTCTTCTTCTTCTTCTT+CGG | - | tig0023654:31644-31663 | None:intergenic | 35.0% | |
CGCAATTCATATCAAAGAAG+AGG | + | tig0023654:31678-31697 | Msa1410390:CDS | 35.0% | |
TCAAACGTCTTCTTGAGAAA+CGG | - | tig0023654:31787-31806 | None:intergenic | 35.0% | |
TCTCAAGAAGACGTTTGAAA+TGG | + | tig0023654:31789-31808 | Msa1410390:CDS | 35.0% | |
!!! | CTCGTGATAGTTTTGTTGTT+TGG | + | tig0023654:31854-31873 | Msa1410390:CDS | 35.0% |
AATGCATGTTTGGTATCATG+TGG | - | tig0023654:32069-32088 | None:intergenic | 35.0% | |
TATAGGGAGCTATGAATGTT+TGG | + | tig0023654:32151-32170 | Msa1410390:intron | 35.0% | |
!! | ATGTTTGGTTCCTCTTTTAG+AGG | + | tig0023654:32166-32185 | Msa1410390:intron | 35.0% |
! | TTCAACATCTCCTCTAAAAG+AGG | - | tig0023654:32179-32198 | None:intergenic | 35.0% |
TTTGCAACCACAAAAATAGG+TGG | + | tig0023654:32583-32602 | Msa1410390:intron | 35.0% | |
!!! | TTAGTCTCCACCTATTTTTG+TGG | - | tig0023654:32593-32612 | None:intergenic | 35.0% |
TTTATGAATCTGTCACATGC+AGG | + | tig0023654:32737-32756 | Msa1410390:intron | 35.0% | |
TTATGAATCTGTCACATGCA+GGG | + | tig0023654:32738-32757 | Msa1410390:intron | 35.0% | |
!! | ATTTCCCAGAAATAATGGGT+AGG | - | tig0023654:32802-32821 | None:intergenic | 35.0% |
AAAGGGTTTCAGAAAAAGGT+GGG | - | tig0023654:32870-32889 | None:intergenic | 35.0% | |
GGTGACATATTGTAGAACAA+AGG | + | tig0023654:32907-32926 | Msa1410390:intron | 35.0% | |
GACATATTGTAGAACAAAGG+TGG | + | tig0023654:32910-32929 | Msa1410390:intron | 35.0% | |
TATCGGATTAACGTGTTAAG+AGG | + | tig0023654:32986-33005 | Msa1410390:intron | 35.0% | |
GTTAAGAGGACTAATGTTCA+TGG | + | tig0023654:33000-33019 | Msa1410390:intron | 35.0% | |
! | TGCAAGACACTTTTACTGTT+TGG | + | tig0023654:33176-33195 | Msa1410390:intron | 35.0% |
AACGAATTGTGAAGGTTTGA+GGG | - | tig0023654:33340-33359 | None:intergenic | 35.0% | |
!!! | GAGCCAGACAAATTTTTTTG+GGG | - | tig0023654:33397-33416 | None:intergenic | 35.0% |
!!! | GGAGCCAGACAAATTTTTTT+GGG | - | tig0023654:33398-33417 | None:intergenic | 35.0% |
CAAATGAAGGATTTCAAGCA+GGG | + | tig0023654:33468-33487 | Msa1410390:intron | 35.0% | |
TATAACAAACTGCATCAAGG+AGG | + | tig0023654:33530-33549 | Msa1410390:CDS | 35.0% | |
!!! | GCTATTTTTCCTCACCAAAA+TGG | + | tig0023654:33724-33743 | Msa1410390:CDS | 35.0% |
GTTAAAAGACCTAGATTGCT+TGG | + | tig0023654:33824-33843 | Msa1410390:CDS | 35.0% | |
! | CTACCAGTGTTCATATTTTC+AGG | - | tig0023654:33932-33951 | None:intergenic | 35.0% |
TAGCTCTTTACATGACTTGA+GGG | + | tig0023654:33994-34013 | Msa1410390:CDS | 35.0% | |
! | TGTTATGTCAGAGAAGCTTT+TGG | + | tig0023654:34066-34085 | Msa1410390:CDS | 35.0% |
! | GTTATGTCAGAGAAGCTTTT+GGG | + | tig0023654:34067-34086 | Msa1410390:CDS | 35.0% |
! | TTATGTCAGAGAAGCTTTTG+GGG | + | tig0023654:34068-34087 | Msa1410390:CDS | 35.0% |
TGATAAGTAAGCCAACAGAT+TGG | + | tig0023654:34158-34177 | Msa1410390:CDS | 35.0% | |
GATAAGTAAGCCAACAGATT+GGG | + | tig0023654:34159-34178 | Msa1410390:CDS | 35.0% | |
ATAAGTAAGCCAACAGATTG+GGG | + | tig0023654:34160-34179 | Msa1410390:CDS | 35.0% | |
ACCGAAGAAGAAGAAGAAGA+AGG | + | tig0023654:31640-31659 | Msa1410390:CDS | 40.0% | |
GAAGAGGTTCTTGAAGAAGA+CGG | + | tig0023654:31694-31713 | Msa1410390:CDS | 40.0% | |
ACTCAGGTTTCCTAAACCAA+TGG | + | tig0023654:31735-31754 | Msa1410390:intron | 40.0% | |
AGGTTTCCTAAACCAATGGA+AGG | + | tig0023654:31739-31758 | Msa1410390:intron | 40.0% | |
GGTTTCCTAAACCAATGGAA+GGG | + | tig0023654:31740-31759 | Msa1410390:intron | 40.0% | |
!! | TGTAACCCTTCCATTGGTTT+AGG | - | tig0023654:31748-31767 | None:intergenic | 40.0% |
! | CAAGAAGACGTTTGAAATGG+TGG | + | tig0023654:31792-31811 | Msa1410390:CDS | 40.0% |
AAACTGACCCGATTGTTTCA+TGG | + | tig0023654:31824-31843 | Msa1410390:CDS | 40.0% | |
AAGCACTCCATGAAACAATC+GGG | - | tig0023654:31834-31853 | None:intergenic | 40.0% | |
! | GAAGCACTCCATGAAACAAT+CGG | - | tig0023654:31835-31854 | None:intergenic | 40.0% |
GGTGGAGACTAAAAATCAAG+AGG | + | tig0023654:32601-32620 | Msa1410390:intron | 40.0% | |
! | ATGGCCTACCCATTATTTCT+GGG | + | tig0023654:32795-32814 | Msa1410390:intron | 40.0% |
GAAAGGGTTTCAGAAAAAGG+TGG | - | tig0023654:32871-32890 | None:intergenic | 40.0% | |
GAGGAAAGGGTTTCAGAAAA+AGG | - | tig0023654:32874-32893 | None:intergenic | 40.0% | |
!! | CGGGATATTACAGTGTTGAT+TGG | - | tig0023654:32946-32965 | None:intergenic | 40.0% |
AAACTGGATAGCAGTAGTCA+CGG | + | tig0023654:33119-33138 | Msa1410390:intron | 40.0% | |
GAACGAATTGTGAAGGTTTG+AGG | - | tig0023654:33341-33360 | None:intergenic | 40.0% | |
ACCTTCACAATTCGTTCAAG+AGG | + | tig0023654:33344-33363 | Msa1410390:intron | 40.0% | |
ACCTCTTGAACGAATTGTGA+AGG | - | tig0023654:33348-33367 | None:intergenic | 40.0% | |
!!! | CCAGACAAATTTTTTTGGGG+TGG | - | tig0023654:33394-33413 | None:intergenic | 40.0% |
CCACCCCAAAAAAATTTGTC+TGG | + | tig0023654:33391-33410 | Msa1410390:intron | 40.0% | |
!!! | CGGAGCCAGACAAATTTTTT+TGG | - | tig0023654:33399-33418 | None:intergenic | 40.0% |
CTTCATTTGCAAACTCCCAA+CGG | - | tig0023654:33457-33476 | None:intergenic | 40.0% | |
GCAAATGAAGGATTTCAAGC+AGG | + | tig0023654:33467-33486 | Msa1410390:intron | 40.0% | |
! | CTCCATAAACAATGGCCTTT+TGG | - | tig0023654:33750-33769 | None:intergenic | 40.0% |
GTAGCTCTTTACATGACTTG+AGG | + | tig0023654:33993-34012 | Msa1410390:CDS | 40.0% | |
! | TATGTCAGAGAAGCTTTTGG+GGG | + | tig0023654:34069-34088 | Msa1410390:CDS | 40.0% |
GCACTGTCGTTGAATAACTC+TGG | - | tig0023654:31562-31581 | None:intergenic | 45.0% | |
CTAACGCTTCATCTTCACTC+AGG | + | tig0023654:31719-31738 | Msa1410390:intron | 45.0% | |
ACCAATGGAAGGGTTACATG+AGG | + | tig0023654:31750-31769 | Msa1410390:intron | 45.0% | |
ACCTCATGTAACCCTTCCAT+TGG | - | tig0023654:31754-31773 | None:intergenic | 45.0% | |
ATGGAAGGGTTACATGAGGT+TGG | + | tig0023654:31754-31773 | Msa1410390:intron | 45.0% | |
AACGTCTTCTTGAGAAACGG+TGG | - | tig0023654:31784-31803 | None:intergenic | 45.0% | |
! | GAAGACGTTTGAAATGGTGG+AGG | + | tig0023654:31795-31814 | Msa1410390:CDS | 45.0% |
! | GTTTGAAATGGTGGAGGATC+CGG | + | tig0023654:31801-31820 | Msa1410390:CDS | 45.0% |
GAAACAATCGGGTCAGTTTC+CGG | - | tig0023654:31823-31842 | None:intergenic | 45.0% | |
!! | GACTTACATAGGTGTTGAGC+TGG | - | tig0023654:31951-31970 | None:intergenic | 45.0% |
!! | CAGAAATAATGGGTAGGCCA+TGG | - | tig0023654:32796-32815 | None:intergenic | 45.0% |
CATGGCCTACCCATTATTTC+TGG | + | tig0023654:32794-32813 | Msa1410390:intron | 45.0% | |
GGTTTCAGAAAAAGGTGGGA+TGG | - | tig0023654:32866-32885 | None:intergenic | 45.0% | |
! | TCTGAAACCCTTTCCTCTCT+TGG | + | tig0023654:32877-32896 | Msa1410390:intron | 45.0% |
AACTGGATAGCAGTAGTCAC+GGG | + | tig0023654:33120-33139 | Msa1410390:intron | 45.0% | |
TGAAGGTTTGAGGGAAAGCT+CGG | - | tig0023654:33331-33350 | None:intergenic | 45.0% | |
! | GAAGGTTGATTCAGACCGTT+GGG | + | tig0023654:33439-33458 | Msa1410390:intron | 45.0% |
CGTTGGGAGTTTGCAAATGA+AGG | + | tig0023654:33455-33474 | Msa1410390:intron | 45.0% | |
TCCTTGCGTTGAATCTGAAG+TGG | + | tig0023654:33568-33587 | Msa1410390:CDS | 45.0% | |
TCCACTTCAGATTCAACGCA+AGG | - | tig0023654:33572-33591 | None:intergenic | 45.0% | |
CAAATGTTCAGGAGCGAGTT+CGG | + | tig0023654:33675-33694 | Msa1410390:CDS | 45.0% | |
TCCTCACCAAAATGGCCAAA+AGG | + | tig0023654:33732-33751 | Msa1410390:CDS | 45.0% | |
! | CAATGGCCTTTTGGCCATTT+TGG | - | tig0023654:33741-33760 | None:intergenic | 45.0% |
GGCCAAAAGGCCATTGTTTA+TGG | + | tig0023654:33745-33764 | Msa1410390:CDS | 45.0% | |
CCTTGTGTTCCAAGCAATCT+AGG | - | tig0023654:33836-33855 | None:intergenic | 45.0% | |
CCTAGATTGCTTGGAACACA+AGG | + | tig0023654:33833-33852 | Msa1410390:CDS | 45.0% | |
TCTTCCATGGGAGTAGAAAC+AGG | - | tig0023654:33965-33984 | None:intergenic | 45.0% | |
GTTTCTACTCCCATGGAAGA+TGG | + | tig0023654:33965-33984 | Msa1410390:CDS | 45.0% | |
CTACACAGTCCATCTTCCAT+GGG | - | tig0023654:33977-33996 | None:intergenic | 45.0% | |
TTACATGACTTGAGGGCTTG+TGG | + | tig0023654:34001-34020 | Msa1410390:CDS | 45.0% | |
GGTGGTTACGACGGTGAAAT+CGG | + | tig0023654:31502-31521 | Msa1410390:CDS | 50.0% | |
TTCGGTTGAAACGTCGTCGT+AGG | - | tig0023654:31602-31621 | None:intergenic | 50.0% | |
GTCTTCTTGAGAAACGGTGG+TGG | - | tig0023654:31781-31800 | None:intergenic | 50.0% | |
CAGAAAAAGGTGGGATGGCA+TGG | - | tig0023654:32861-32880 | None:intergenic | 50.0% | |
ACCACAGCCAAGAGAGGAAA+GGG | - | tig0023654:32887-32906 | None:intergenic | 50.0% | |
AGAGGACGCGAGAGATAGAA+AGG | - | tig0023654:33224-33243 | None:intergenic | 50.0% | |
! | AAGCTCGGTGGAATGGAGAT+GGG | - | tig0023654:33316-33335 | None:intergenic | 50.0% |
! | AAAGCTCGGTGGAATGGAGA+TGG | - | tig0023654:33317-33336 | None:intergenic | 50.0% |
TTCCTAAACCCCTGCATCAG+TGG | - | tig0023654:33422-33441 | None:intergenic | 50.0% | |
ACTGATGCAGGGGTTTAGGA+AGG | + | tig0023654:33421-33440 | Msa1410390:intron | 50.0% | |
! | GGAAGGTTGATTCAGACCGT+TGG | + | tig0023654:33438-33457 | Msa1410390:intron | 50.0% |
!! | GCCTTTTGGCCATTTTGGTG+AGG | - | tig0023654:33736-33755 | None:intergenic | 50.0% |
!! | ACCACCTGTTTCTACTCCCA+TGG | + | tig0023654:33958-33977 | Msa1410390:CDS | 50.0% |
TCCATGGGAGTAGAAACAGG+TGG | - | tig0023654:33962-33981 | None:intergenic | 50.0% | |
GCTACACAGTCCATCTTCCA+TGG | - | tig0023654:33978-33997 | None:intergenic | 50.0% | |
AGTAAGCCAACAGATTGGGG+TGG | + | tig0023654:34163-34182 | Msa1410390:CDS | 50.0% | |
!! | TGGATCTGCTAGTGGATTGG+TGG | + | tig0023654:34183-34202 | Msa1410390:CDS | 50.0% |
!! | GGATCTGCTAGTGGATTGGT+GGG | + | tig0023654:34184-34203 | Msa1410390:CDS | 50.0% |
GGTTACGACGGTGAAATCGG+TGG | + | tig0023654:31505-31524 | Msa1410390:CDS | 55.0% | |
ATCTGTCACATGCAGGGCAG+TGG | + | tig0023654:32744-32763 | Msa1410390:intron | 55.0% | |
ACCCTTTCCTCTCTTGGCTG+TGG | + | tig0023654:32883-32902 | Msa1410390:intron | 55.0% | |
CACCACAGCCAAGAGAGGAA+AGG | - | tig0023654:32888-32907 | None:intergenic | 55.0% | |
CTTTCCTCTCTTGGCTGTGG+TGG | + | tig0023654:32886-32905 | Msa1410390:intron | 55.0% | |
CGTGAGAGAGTAGAGGAGGA+AGG | - | tig0023654:33287-33306 | None:intergenic | 55.0% | |
! | GAAGAGGCGTGAGAGAGTAG+AGG | - | tig0023654:33294-33313 | None:intergenic | 55.0% |
GGTGGAATGGAGATGGGAAG+AGG | - | tig0023654:33310-33329 | None:intergenic | 55.0% | |
! | TGAGGGAAAGCTCGGTGGAA+TGG | - | tig0023654:33323-33342 | None:intergenic | 55.0% |
AGGTTTGAGGGAAAGCTCGG+TGG | - | tig0023654:33328-33347 | None:intergenic | 55.0% | |
CTAAACCCCTGCATCAGTGG+CGG | - | tig0023654:33419-33438 | None:intergenic | 55.0% | |
CATGACTTGAGGGCTTGTGG+TGG | + | tig0023654:34004-34023 | Msa1410390:CDS | 55.0% | |
GCAGATCCACCCCAATCTGT+TGG | - | tig0023654:34172-34191 | None:intergenic | 55.0% | |
GATTGGGGTGGATCTGCTAG+TGG | + | tig0023654:34175-34194 | Msa1410390:CDS | 55.0% | |
! | GGGTGGATCTGCTAGTGGAT+TGG | + | tig0023654:34180-34199 | Msa1410390:CDS | 55.0% |
GTGGCACACGGTGGTTACGA+CGG | + | tig0023654:31493-31512 | Msa1410390:CDS | 60.0% | |
TGTCACATGCAGGGCAGTGG+CGG | + | tig0023654:32747-32766 | Msa1410390:intron | 60.0% | |
AGCTACACCAGGACTGGGGT+AGG | + | tig0023654:32770-32789 | Msa1410390:intron | 60.0% | |
GTCACCACCACAGCCAAGAG+AGG | - | tig0023654:32893-32912 | None:intergenic | 60.0% | |
GAGGCGTGAGAGAGTAGAGG+AGG | - | tig0023654:33291-33310 | None:intergenic | 60.0% | |
CGCCACTGATGCAGGGGTTT+AGG | + | tig0023654:33417-33436 | Msa1410390:intron | 60.0% | |
TGGCGGAGCTACACCAGGAC+TGG | + | tig0023654:32764-32783 | Msa1410390:intron | 65.0% | |
GGCGGAGCTACACCAGGACT+GGG | + | tig0023654:32765-32784 | Msa1410390:intron | 65.0% | |
GCGGAGCTACACCAGGACTG+GGG | + | tig0023654:32766-32785 | Msa1410390:intron | 65.0% | |
ACCAGGACTGGGGTAGGCCA+TGG | + | tig0023654:32776-32795 | Msa1410390:intron | 65.0% | |
! | TCTGGCTCCGCCACTGATGC+AGG | + | tig0023654:33409-33428 | Msa1410390:intron | 65.0% |
CTGGCTCCGCCACTGATGCA+GGG | + | tig0023654:33410-33429 | Msa1410390:intron | 65.0% | |
TGGCTCCGCCACTGATGCAG+GGG | + | tig0023654:33411-33430 | Msa1410390:intron | 65.0% | |
! | GGCAGTGGCGGAGCTACACC+AGG | + | tig0023654:32759-32778 | Msa1410390:intron | 70.0% |
GCCATGGCCTACCCCAGTCC+TGG | - | tig0023654:32780-32799 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0023654 | gene | 31487 | 34219 | 31487 | ID=Msa1410390;Name=Msa1410390 |
tig0023654 | mRNA | 31487 | 34219 | 31487 | ID=Msa1410390-mRNA-1;Parent=Msa1410390;Name=Msa1410390-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|0|0|3|0|380 |
tig0023654 | exon | 31487 | 31715 | 31487 | ID=Msa1410390-mRNA-1:exon:26575;Parent=Msa1410390-mRNA-1 |
tig0023654 | exon | 31761 | 31963 | 31761 | ID=Msa1410390-mRNA-1:exon:26576;Parent=Msa1410390-mRNA-1 |
tig0023654 | exon | 33509 | 34219 | 33509 | ID=Msa1410390-mRNA-1:exon:26577;Parent=Msa1410390-mRNA-1 |
tig0023654 | CDS | 31487 | 31715 | 31487 | ID=Msa1410390-mRNA-1:cds;Parent=Msa1410390-mRNA-1 |
tig0023654 | CDS | 31761 | 31963 | 31761 | ID=Msa1410390-mRNA-1:cds;Parent=Msa1410390-mRNA-1 |
tig0023654 | CDS | 33509 | 34219 | 33509 | ID=Msa1410390-mRNA-1:cds;Parent=Msa1410390-mRNA-1 |
Gene Sequence |
Protein sequence |