Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549930 | XP_013456385.1 | 95.128 | 431 | 21 | 0 | 1 | 431 | 1 | 431 | 0.0 | 848 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549930 | sp|Q9LN62|RRA3_ARATH | 65.228 | 417 | 133 | 5 | 22 | 429 | 14 | 427 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549930 | A0A072UM19 | 95.128 | 431 | 21 | 0 | 1 | 431 | 1 | 431 | 0.0 | 848 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048950 | Msa0549930 | 0.814852 | 1.247213e-51 | -8.615850e-47 |
| Msa0059880 | Msa0549930 | 0.828557 | 8.416234e-55 | -8.615850e-47 |
| Msa0073270 | Msa0549930 | 0.800390 | 1.474046e-48 | -8.615850e-47 |
| Msa0143680 | Msa0549930 | 0.849426 | 3.258582e-60 | -8.615850e-47 |
| Msa0143710 | Msa0549930 | 0.844930 | 5.572153e-59 | -8.615850e-47 |
| Msa0143740 | Msa0549930 | 0.839486 | 1.539566e-57 | -8.615850e-47 |
| Msa0143770 | Msa0549930 | 0.839990 | 1.138499e-57 | -8.615850e-47 |
| Msa0150910 | Msa0549930 | 0.815267 | 1.008973e-51 | -8.615850e-47 |
| Msa0259110 | Msa0549930 | 0.803274 | 3.768957e-49 | -8.615850e-47 |
| Msa0272210 | Msa0549930 | 0.800205 | 1.607714e-48 | -8.615850e-47 |
| Msa0298270 | Msa0549930 | 0.804313 | 2.293768e-49 | -8.615850e-47 |
| Msa0342130 | Msa0549930 | 0.808467 | 3.053593e-50 | -8.615850e-47 |
| Msa0343720 | Msa0549930 | 0.834935 | 2.247054e-56 | -8.615850e-47 |
| Msa0535570 | Msa0549930 | 0.818101 | 2.336385e-52 | -8.615850e-47 |
| Msa0538450 | Msa0549930 | 0.807110 | 5.931563e-50 | -8.615850e-47 |
| Msa0538520 | Msa0549930 | 0.807021 | 6.195597e-50 | -8.615850e-47 |
| Msa0549920 | Msa0549930 | 0.819418 | 1.173472e-52 | -8.615850e-47 |
| Msa0549930 | Msa0579530 | 0.805456 | 1.323222e-49 | -8.615850e-47 |
| Msa0549930 | Msa0584970 | 0.809698 | 1.664020e-50 | -8.615850e-47 |
| Msa0549930 | Msa0605400 | 0.815194 | 1.047520e-51 | -8.615850e-47 |
| Msa0549930 | Msa0605410 | 0.840905 | 6.562555e-58 | -8.615850e-47 |
| Msa0549930 | Msa0605470 | 0.826352 | 2.844356e-54 | -8.615850e-47 |
| Msa0549930 | Msa0623980 | 0.834464 | 2.952577e-56 | -8.615850e-47 |
| Msa0549930 | Msa0631700 | 0.801261 | 9.785387e-49 | -8.615850e-47 |
| Msa0549930 | Msa0643840 | 0.819739 | 9.914976e-53 | -8.615850e-47 |
| Msa0549930 | Msa0645150 | 0.801552 | 8.531409e-49 | -8.615850e-47 |
| Msa0549930 | Msa0646210 | 0.939861 | 6.222809e-100 | -8.615850e-47 |
| Msa0549930 | Msa0670260 | 0.843958 | 1.016931e-58 | -8.615850e-47 |
| Msa0549930 | Msa0670360 | 0.816369 | 5.729277e-52 | -8.615850e-47 |
| Msa0549930 | Msa0671640 | 0.827116 | 1.868636e-54 | -8.615850e-47 |
| Msa0549930 | Msa0676190 | 0.800677 | 1.288458e-48 | -8.615850e-47 |
| Msa0549930 | Msa0678620 | 0.817435 | 3.302498e-52 | -8.615850e-47 |
| Msa0549930 | Msa0727480 | 0.814518 | 1.479010e-51 | -8.615850e-47 |
| Msa0549930 | Msa0768670 | 0.834202 | 3.434545e-56 | -8.615850e-47 |
| Msa0549930 | Msa0768720 | 0.834131 | 3.579690e-56 | -8.615850e-47 |
| Msa0549930 | Msa0814160 | 0.826604 | 2.476546e-54 | -8.615850e-47 |
| Msa0549930 | Msa0824860 | 0.800499 | 1.400451e-48 | -8.615850e-47 |
| Msa0549930 | Msa0841130 | 0.802753 | 4.829623e-49 | -8.615850e-47 |
| Msa0549930 | Msa0841170 | 0.800415 | 1.456566e-48 | -8.615850e-47 |
| Msa0549930 | Msa0854840 | 0.805980 | 1.026981e-49 | -8.615850e-47 |
| Msa0549930 | Msa0863840 | 0.803954 | 2.723632e-49 | -8.615850e-47 |
| Msa0549930 | Msa0864160 | 0.804407 | 2.192465e-49 | -8.615850e-47 |
| Msa0549930 | Msa0868820 | 0.804025 | 2.633523e-49 | -8.615850e-47 |
| Msa0549930 | Msa0883640 | 0.822452 | 2.350880e-53 | -8.615850e-47 |
| Msa0549930 | Msa0902340 | 0.822315 | 2.529479e-53 | -8.615850e-47 |
| Msa0549930 | Msa0910830 | 0.835799 | 1.359879e-56 | -8.615850e-47 |
| Msa0549930 | Msa0932890 | 0.806868 | 6.674641e-50 | -8.615850e-47 |
| Msa0549930 | Msa0933590 | 0.808348 | 3.236857e-50 | -8.615850e-47 |
| Msa0549930 | Msa0960090 | 0.823698 | 1.204319e-53 | -8.615850e-47 |
| Msa0549930 | Msa0985700 | 0.820592 | 6.324531e-53 | -8.615850e-47 |
| Msa0549930 | Msa0993450 | 0.805095 | 1.575354e-49 | -8.615850e-47 |
| Msa0549930 | Msa1003110 | 0.828723 | 7.670992e-55 | -8.615850e-47 |
| Msa0549930 | Msa1020540 | 0.834824 | 2.397469e-56 | -8.615850e-47 |
| Msa0549930 | Msa1021620 | 0.818686 | 1.721972e-52 | -8.615850e-47 |
| Msa0549930 | Msa1024350 | 0.811533 | 6.677231e-51 | -8.615850e-47 |
| Msa0549930 | Msa1026050 | 0.814895 | 1.220543e-51 | -8.615850e-47 |
| Msa0549930 | Msa1061670 | 0.819876 | 9.223032e-53 | -8.615850e-47 |
| Msa0549930 | Msa1076830 | 0.814353 | 1.608740e-51 | -8.615850e-47 |
| Msa0549930 | Msa1087380 | 0.811060 | 8.457677e-51 | -8.615850e-47 |
| Msa0549930 | Msa1091000 | 0.813475 | 2.512152e-51 | -8.615850e-47 |
| Msa0549930 | Msa1106960 | 0.812457 | 4.198284e-51 | -8.615850e-47 |
| Msa0549930 | Msa1109880 | 0.822846 | 1.903852e-53 | -8.615850e-47 |
| Msa0549930 | Msa1109890 | 0.823509 | 1.333017e-53 | -8.615850e-47 |
| Msa0549930 | Msa1133860 | 0.825906 | 3.629681e-54 | -8.615850e-47 |
| Msa0549930 | Msa1149020 | 0.816491 | 5.381616e-52 | -8.615850e-47 |
| Msa0549930 | Msa1187900 | 0.808805 | 2.586061e-50 | -8.615850e-47 |
| Msa0549930 | Msa1199110 | 0.806010 | 1.012358e-49 | -8.615850e-47 |
| Msa0549930 | Msa1214960 | 0.801298 | 9.620011e-49 | -8.615850e-47 |
| Msa0549930 | Msa1282150 | 0.803070 | 4.154646e-49 | -8.615850e-47 |
| Msa0549930 | Msa1286420 | 0.813180 | 2.916441e-51 | -8.615850e-47 |
| Msa0549930 | Msa1300610 | 0.800020 | 1.752946e-48 | -8.615850e-47 |
| Msa0549930 | Msa1323030 | 0.824704 | 6.985823e-54 | -8.615850e-47 |
| Msa0549930 | Msa1357860 | 0.816650 | 4.958324e-52 | -8.615850e-47 |
| Msa0549930 | Msa1373560 | 0.802854 | 4.605059e-49 | -8.615850e-47 |
| Msa0549930 | Msa1376070 | 0.821812 | 3.308727e-53 | -8.615850e-47 |
| Msa0549930 | Msa1377460 | 0.802398 | 5.716819e-49 | -8.615850e-47 |
| Msa0549930 | Msa1378400 | 0.803066 | 4.162612e-49 | -8.615850e-47 |
| Msa0549930 | Msa1407670 | 0.820348 | 7.191635e-53 | -8.615850e-47 |
| Msa0549930 | Msa1449770 | 0.824264 | 8.870702e-54 | -8.615850e-47 |
| Msa0549930 | Msa1459610 | 0.822116 | 2.813627e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549930 | MtrunA17_Chr4g0034631 | 95.128 | 431 | 21 | 0 | 1 | 431 | 1 | 431 | 0.0 | 848 |
| Msa0549930 | MtrunA17_Chr4g0034641 | 86.836 | 433 | 55 | 1 | 1 | 431 | 1 | 433 | 0.0 | 771 |
| Msa0549930 | MtrunA17_Chr4g0034621 | 85.321 | 436 | 57 | 1 | 1 | 429 | 1 | 436 | 0.0 | 744 |
| Msa0549930 | MtrunA17_Chr4g0034651 | 84.247 | 438 | 53 | 2 | 1 | 431 | 34 | 462 | 0.0 | 733 |
| Msa0549930 | MtrunA17_Chr4g0034611 | 80.734 | 436 | 76 | 2 | 1 | 429 | 1 | 435 | 0.0 | 728 |
| Msa0549930 | MtrunA17_Chr4g0034661 | 81.250 | 432 | 68 | 2 | 1 | 430 | 1 | 421 | 0.0 | 688 |
| Msa0549930 | MtrunA17_Chr1g0154701 | 65.116 | 430 | 136 | 3 | 7 | 429 | 5 | 427 | 0.0 | 568 |
| Msa0549930 | MtrunA17_Chr8g0367951 | 27.692 | 195 | 118 | 7 | 159 | 348 | 391 | 567 | 2.80e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0549930 | AT1G19360.1 | 65.228 | 417 | 133 | 5 | 22 | 429 | 14 | 427 | 0.0 | 553 |
| Msa0549930 | AT1G19360.2 | 65.228 | 417 | 133 | 5 | 22 | 429 | 14 | 427 | 0.0 | 553 |
| Msa0549930 | AT1G75110.1 | 63.855 | 415 | 142 | 2 | 22 | 429 | 14 | 427 | 0.0 | 548 |
| Msa0549930 | AT1G75120.1 | 63.054 | 406 | 131 | 3 | 24 | 429 | 16 | 402 | 0.0 | 519 |
| Msa0549930 | AT1G70630.5 | 28.910 | 211 | 118 | 6 | 148 | 348 | 230 | 418 | 1.86e-15 | 78.6 |
| Msa0549930 | AT1G70630.2 | 28.910 | 211 | 118 | 6 | 148 | 348 | 261 | 449 | 2.25e-15 | 78.6 |
| Msa0549930 | AT1G70630.1 | 28.910 | 211 | 118 | 6 | 148 | 348 | 261 | 449 | 2.25e-15 | 78.6 |
| Msa0549930 | AT1G70630.7 | 28.910 | 211 | 118 | 6 | 148 | 348 | 398 | 586 | 3.15e-15 | 78.6 |
| Msa0549930 | AT1G70630.4 | 28.910 | 211 | 118 | 6 | 148 | 348 | 446 | 634 | 3.54e-15 | 78.2 |
| Msa0549930 | AT1G70630.6 | 28.910 | 211 | 118 | 6 | 148 | 348 | 467 | 655 | 3.90e-15 | 78.2 |
| Msa0549930 | AT1G70630.3 | 28.910 | 211 | 118 | 6 | 148 | 348 | 477 | 665 | 4.03e-15 | 78.2 |
Find 93 sgRNAs with CRISPR-Local
Find 528 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCGGGTCTCTTTGGTAAAA+TGG | 0.121490 | 4_1:+45238942 | None:intergenic |
| CATTCCTTCAATTGAGCTTT+TGG | 0.209327 | 4_1:-45238607 | Msa0549930:CDS |
| CTTGATATGAGTAGAAAATT+AGG | 0.240715 | 4_1:+45247222 | None:intergenic |
| AAGGCAACAACTAGATAATT+AGG | 0.282391 | 4_1:+45239005 | None:intergenic |
| CATAATAACATGACAGCTTA+TGG | 0.285401 | 4_1:-45238732 | Msa0549930:CDS |
| GTTGTTGAATATTATGTTAA+TGG | 0.296088 | 4_1:-45238336 | Msa0549930:CDS |
| GTAATCATTGGAGTTCTTAC+TGG | 0.301834 | 4_1:-45247186 | Msa0549930:CDS |
| CCAAACGGTGCGGCTGTCTC+CGG | 0.317342 | 4_1:-45238891 | Msa0549930:CDS |
| TATCATTATCCGGGTCTCTT+TGG | 0.318671 | 4_1:+45238934 | None:intergenic |
| TAAGAATCCTGTACAATGAT+TGG | 0.344740 | 4_1:-45247282 | None:intergenic |
| TCATGCTGCTAAAAGAACTA+TGG | 0.353213 | 4_1:-45238487 | Msa0549930:CDS |
| TCTAATAAATTTGCCAATCT+CGG | 0.356388 | 4_1:+45239128 | None:intergenic |
| TTGTTGAATATTATGTTAAT+GGG | 0.359540 | 4_1:-45238335 | Msa0549930:CDS |
| CATGTTAAAATCAGAATTAG+TGG | 0.362941 | 4_1:-45239327 | Msa0549930:CDS |
| TATACCAACTCTCTTGATAT+TGG | 0.365508 | 4_1:+45239028 | None:intergenic |
| GTTGCTTGCATTAAGTAAAC+AGG | 0.375504 | 4_1:-45239225 | Msa0549930:CDS |
| AATTCATCAGGAGCAACAAT+AGG | 0.376468 | 4_1:+45239158 | None:intergenic |
| TGAGAAACAAAGAAGTCATT+AGG | 0.384447 | 4_1:+45247141 | None:intergenic |
| TTGATATGAGTAGAAAATTA+GGG | 0.387021 | 4_1:+45247223 | None:intergenic |
| TAATTCACGTGAATAATTAC+CGG | 0.389710 | 4_1:+45238390 | None:intergenic |
| CCGGGTCTCTTTGGTAAAAT+GGG | 0.403345 | 4_1:+45238943 | None:intergenic |
| AGAATTAGTGGCACTCTTAT+CGG | 0.411192 | 4_1:-45239315 | Msa0549930:CDS |
| CTAATAAATTTGCCAATCTC+GGG | 0.411225 | 4_1:+45239129 | None:intergenic |
| TGGGTCTTGGGTACAGCAAC+AGG | 0.416936 | 4_1:+45247093 | None:intergenic |
| CCGGAGACAGCCGCACCGTT+TGG | 0.418325 | 4_1:+45238891 | None:intergenic |
| ACGGTATCAATATCATTATC+CGG | 0.420062 | 4_1:+45238924 | None:intergenic |
| TGAATTCTTGAACCCGAGAT+TGG | 0.422149 | 4_1:-45239141 | Msa0549930:CDS |
| TGATCATCTATACCGTGATT+CGG | 0.426234 | 4_1:-45238778 | Msa0549930:CDS |
| CTTCTGTCAACTCACTCACC+TGG | 0.436427 | 4_1:+45239270 | None:intergenic |
| ATCGTTACCGCTGTAATCAT+TGG | 0.439320 | 4_1:-45247198 | Msa0549930:CDS |
| CAAACGGTGCGGCTGTCTCC+GGG | 0.441277 | 4_1:-45238890 | Msa0549930:CDS |
| ATTAGGGTTGTTCTTCATCA+AGG | 0.448286 | 4_1:+45247239 | None:intergenic |
| CGAGGTGTGCCATCGGGAAA+CGG | 0.450059 | 4_1:+45238294 | None:intergenic |
| CTCGGGTTCAAGAATTCATC+AGG | 0.455431 | 4_1:+45239146 | None:intergenic |
| AAGAATCCTGTACAATGATT+GGG | 0.460232 | 4_1:-45247281 | None:intergenic |
| CGAAAGATAACCTGGGTCTT+GGG | 0.463127 | 4_1:+45247081 | None:intergenic |
| AACAGGTAGGTGACGATTTG+AGG | 0.468113 | 4_1:+45247110 | None:intergenic |
| AGCTCAATTGAAGGAATGGT+TGG | 0.470800 | 4_1:+45238612 | None:intergenic |
| ACGAAAGATAACCTGGGTCT+TGG | 0.478063 | 4_1:+45247080 | None:intergenic |
| AAAGAGTTCCTCGTTGAAAA+CGG | 0.480750 | 4_1:+45238539 | None:intergenic |
| TCAACAACTGCTTTCATTCG+CGG | 0.485251 | 4_1:+45238351 | None:intergenic |
| ATTCATCAGGAGCAACAATA+GGG | 0.490622 | 4_1:+45239159 | None:intergenic |
| CCTTCACATTTGAGTTTGCA+AGG | 0.492258 | 4_1:+45239072 | None:intergenic |
| GAAACGGTTTGAGAGCATCT+TGG | 0.499499 | 4_1:+45238310 | None:intergenic |
| TCACGGTATAGATGATCAAA+AGG | 0.505121 | 4_1:+45238783 | None:intergenic |
| GACTTTCGAAGGGGAATGCA+TGG | 0.506305 | 4_1:-45238569 | Msa0549930:CDS |
| CAAAAGCTCAATTGAAGGAA+TGG | 0.508580 | 4_1:+45238608 | None:intergenic |
| GGTTATCGAGGTGTGCCATC+GGG | 0.509728 | 4_1:+45238288 | None:intergenic |
| TAACCTCAGTAAATTGAAAC+CGG | 0.514324 | 4_1:-45238409 | Msa0549930:CDS |
| CCATCACATCCTGGTTATGA+CGG | 0.520532 | 4_1:-45238513 | Msa0549930:CDS |
| CGGTCCAAAAGCTCAATTGA+AGG | 0.530180 | 4_1:+45238603 | None:intergenic |
| GTTATTATGACCATCGCTCA+TGG | 0.530943 | 4_1:+45238746 | None:intergenic |
| TTAGGGTTGTTCTTCATCAA+GGG | 0.533582 | 4_1:+45247240 | None:intergenic |
| ATCAGGAGCAACAATAGGGT+TGG | 0.536486 | 4_1:+45239163 | None:intergenic |
| TGGTTATCGAGGTGTGCCAT+CGG | 0.540059 | 4_1:+45238287 | None:intergenic |
| GATAATGATATTGATACCGT+TGG | 0.558317 | 4_1:-45238921 | Msa0549930:CDS |
| GCATGAAGCCCGTCATAACC+AGG | 0.559070 | 4_1:+45238504 | None:intergenic |
| TGAAGGAAATGCTCGAGGTA+TGG | 0.559342 | 4_1:-45239055 | Msa0549930:CDS |
| CATCACATCCTGGTTATGAC+GGG | 0.559997 | 4_1:-45238512 | Msa0549930:CDS |
| CGGTATCAATATCATTATCC+GGG | 0.562448 | 4_1:+45238925 | None:intergenic |
| TCAAAGACCATGGGATGGGT+TGG | 0.564496 | 4_1:-45238695 | Msa0549930:CDS |
| TGTGGCAGCACGACTTTCGA+AGG | 0.565368 | 4_1:-45238580 | Msa0549930:CDS |
| GTCTTCAAAGACCATGGGAT+GGG | 0.567731 | 4_1:-45238699 | Msa0549930:CDS |
| CTTCACATTTGAGTTTGCAA+GGG | 0.571821 | 4_1:+45239073 | None:intergenic |
| TCGAAAGTCGTGCTGCCACA+CGG | 0.575082 | 4_1:+45238583 | None:intergenic |
| TAGAATACGAAATTTAAGCC+CGG | 0.575223 | 4_1:+45238872 | None:intergenic |
| GTTCCTCGTTGAAAACGGCT+TGG | 0.577634 | 4_1:+45238544 | None:intergenic |
| AACGATGTCTTCAAAGACCA+TGG | 0.583875 | 4_1:-45238705 | Msa0549930:CDS |
| CCTTGCAAACTCAAATGTGA+AGG | 0.591600 | 4_1:-45239072 | Msa0549930:CDS |
| GTGGCAGCACGACTTTCGAA+GGG | 0.594024 | 4_1:-45238579 | Msa0549930:CDS |
| TTCACCAATATCAAGAGAGT+TGG | 0.596908 | 4_1:-45239032 | Msa0549930:CDS |
| AATGCCTTGACAGTACCAAA+AGG | 0.604979 | 4_1:+45239191 | None:intergenic |
| CCGTCATAACCAGGATGTGA+TGG | 0.606127 | 4_1:+45238513 | None:intergenic |
| TCATTCGCGGAAGCTTATCA+CGG | 0.615337 | 4_1:+45238364 | None:intergenic |
| CAGGTGAGTGAGTTGACAGA+AGG | 0.616883 | 4_1:-45239269 | Msa0549930:CDS |
| TGTCTTCAAAGACCATGGGA+TGG | 0.621538 | 4_1:-45238700 | Msa0549930:CDS |
| TAGTAGACCAACCCATCCCA+TGG | 0.627281 | 4_1:+45238688 | None:intergenic |
| GATGTTGAGTCCATGAGCGA+TGG | 0.629878 | 4_1:-45238756 | Msa0549930:CDS |
| TGGACTCAACATCCGAATCA+CGG | 0.631798 | 4_1:+45238766 | None:intergenic |
| GCTCTCAAACCGTTTCCCGA+TGG | 0.639969 | 4_1:-45238303 | Msa0549930:CDS |
| ACATAGAATAATGGTTATCG+AGG | 0.641779 | 4_1:+45238276 | None:intergenic |
| ACGATGTCTTCAAAGACCAT+GGG | 0.646143 | 4_1:-45238704 | Msa0549930:CDS |
| ACTTTCGAAGGGGAATGCAT+GGG | 0.655092 | 4_1:-45238568 | Msa0549930:CDS |
| AAATGTGAAGGAAATGCTCG+AGG | 0.663837 | 4_1:-45239060 | Msa0549930:CDS |
| TTACCGGTTTCAATTTACTG+AGG | 0.667376 | 4_1:+45238406 | None:intergenic |
| GTTGACAGAAGGAAAAGACC+AGG | 0.674807 | 4_1:-45239258 | Msa0549930:CDS |
| TCTTGGGTACAGCAACAGGT+AGG | 0.680252 | 4_1:+45247097 | None:intergenic |
| CTACTAACGTTTATACCACG+AGG | 0.687704 | 4_1:-45238671 | Msa0549930:CDS |
| TGTTGCTGTACCCAAGACCC+AGG | 0.690565 | 4_1:-45247091 | Msa0549930:intron |
| TGGCAGCACGACTTTCGAAG+GGG | 0.696691 | 4_1:-45238578 | Msa0549930:CDS |
| ATTGAAAACAAATATCCTCG+TGG | 0.698093 | 4_1:+45238656 | None:intergenic |
| AAGAACTCCAATGATTACAG+CGG | 0.709043 | 4_1:+45247191 | None:intergenic |
| TTCGCGGAAGCTTATCACGG+TGG | 0.727930 | 4_1:+45238367 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATATTAATTAAATTAA+AGG | - | chr4_1:45242562-45242581 | Msa0549930:intron | 0.0% |
| !! | AAAAAAATATTAAAAAATTA+TGG | + | chr4_1:45244176-45244195 | None:intergenic | 0.0% |
| !!! | TCAACTTTTTAAAAAAATTT+AGG | - | chr4_1:45238876-45238895 | Msa0549930:CDS | 10.0% |
| !!! | CAACTTTTTAAAAAAATTTA+GGG | - | chr4_1:45238877-45238896 | Msa0549930:CDS | 10.0% |
| !! | CTATTTCAAATAAAAAAAAA+AGG | + | chr4_1:45240590-45240609 | None:intergenic | 10.0% |
| !!! | AAATATAGTTTTTTATTTTG+TGG | + | chr4_1:45240779-45240798 | None:intergenic | 10.0% |
| !! | TATTATATTTACTATATTGT+TGG | + | chr4_1:45240818-45240837 | None:intergenic | 10.0% |
| !! | TAGTTTAAATTCATTAAAAT+AGG | - | chr4_1:45241242-45241261 | Msa0549930:intron | 10.0% |
| !!! | AAAAATTCATAATTAATTTG+TGG | + | chr4_1:45241515-45241534 | None:intergenic | 10.0% |
| !!! | CAAATTTTTTTTATAGTTTT+TGG | - | chr4_1:45242639-45242658 | Msa0549930:intron | 10.0% |
| !! | TCTAAAAAAAATTAAAATTC+TGG | - | chr4_1:45243302-45243321 | Msa0549930:intron | 10.0% |
| !!! | TTTAATTTTTTTCGAAAATT+TGG | + | chr4_1:45243436-45243455 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTCGAAATTTTT+TGG | + | chr4_1:45243835-45243854 | None:intergenic | 10.0% |
| !! | AAGAAAAAATTAAAAAATTC+TGG | + | chr4_1:45243963-45243982 | None:intergenic | 10.0% |
| !! | AAAAAAATATTAACAAATTC+TGG | + | chr4_1:45244020-45244039 | None:intergenic | 10.0% |
| !!! | ATATTTTTTTATTACATAAC+TGG | - | chr4_1:45244237-45244256 | Msa0549930:intron | 10.0% |
| !!! | TATTTTTTTATTACATAACT+GGG | - | chr4_1:45244238-45244257 | Msa0549930:intron | 10.0% |
| !!! | CAAAAAAATTTTATAGTTTT+TGG | + | chr4_1:45244334-45244353 | None:intergenic | 10.0% |
| !!! | ACAAAATATAATTTTATACA+AGG | + | chr4_1:45244545-45244564 | None:intergenic | 10.0% |
| !! | ATTTAAATCTTTATTGAAAT+AGG | - | chr4_1:45244707-45244726 | Msa0549930:intron | 10.0% |
| !!! | TGATTTTATATTTTTGAAAT+AGG | - | chr4_1:45244799-45244818 | Msa0549930:intron | 10.0% |
| !! | AGAACATATTTAATTATTAA+GGG | + | chr4_1:45245128-45245147 | None:intergenic | 10.0% |
| !! | TAGAACATATTTAATTATTA+AGG | + | chr4_1:45245129-45245148 | None:intergenic | 10.0% |
| !!! | ATGAATTATTTTTTCTTAAA+TGG | + | chr4_1:45245210-45245229 | None:intergenic | 10.0% |
| !!! | TTGTTTCATATTTTATAATA+GGG | - | chr4_1:45245372-45245391 | Msa0549930:intron | 10.0% |
| !! | TTTGAAAAAAAATTGTATTA+CGG | + | chr4_1:45245480-45245499 | None:intergenic | 10.0% |
| !! | TATATATATATAGGATACTT+GGG | + | chr4_1:45238998-45239017 | None:intergenic | 15.0% |
| !! | ATATATATATATAGGATACT+TGG | + | chr4_1:45238999-45239018 | None:intergenic | 15.0% |
| !! | ATATAAACGTTTATTAAAAG+TGG | - | chr4_1:45239406-45239425 | Msa0549930:intron | 15.0% |
| !!! | TTTTATAAAGTATTGTTTAG+TGG | + | chr4_1:45239497-45239516 | None:intergenic | 15.0% |
| !!! | AATGATTTTATTTTTTTGAG+AGG | + | chr4_1:45239786-45239805 | None:intergenic | 15.0% |
| !!! | ACTTTAGTTTAGTATAAAAT+AGG | - | chr4_1:45241175-45241194 | Msa0549930:intron | 15.0% |
| !!! | ATATATTATTTCTATTGTAG+CGG | + | chr4_1:45241275-45241294 | None:intergenic | 15.0% |
| !! | TAGAAATAATATATGATCAT+AGG | - | chr4_1:45241281-45241300 | Msa0549930:intron | 15.0% |
| !! | AGAAATAATATATGATCATA+GGG | - | chr4_1:45241282-45241301 | Msa0549930:intron | 15.0% |
| !! | TAATTACTTGTCAAAAAAAA+AGG | - | chr4_1:45241306-45241325 | Msa0549930:intron | 15.0% |
| !! | AATTACTTGTCAAAAAAAAA+GGG | - | chr4_1:45241307-45241326 | Msa0549930:intron | 15.0% |
| !!! | TTTTTTAGTTTTGAAATGAT+AGG | - | chr4_1:45241807-45241826 | Msa0549930:intron | 15.0% |
| !! | TCTAAGAAATTCATAATTAT+GGG | - | chr4_1:45241848-45241867 | Msa0549930:intron | 15.0% |
| !!! | TTATTTCATGATTTTTTTTC+AGG | + | chr4_1:45242166-45242185 | None:intergenic | 15.0% |
| !!! | TCAAACATAGTATATTTTAT+AGG | - | chr4_1:45242298-45242317 | Msa0549930:intron | 15.0% |
| !!! | CAAACATAGTATATTTTATA+GGG | - | chr4_1:45242299-45242318 | Msa0549930:intron | 15.0% |
| !! | TTAAATTAAAGGCTTAAATA+TGG | - | chr4_1:45242573-45242592 | Msa0549930:intron | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr4_1:45242637-45242656 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr4_1:45242638-45242657 | None:intergenic | 15.0% |
| !! | AACTATAAAAAAAATTTGCA+GGG | + | chr4_1:45242637-45242656 | None:intergenic | 15.0% |
| !! | AAACTATAAAAAAAATTTGC+AGG | + | chr4_1:45242638-45242657 | None:intergenic | 15.0% |
| !! | CTATAAAAAAAAAATTTGCA+GGG | + | chr4_1:45242759-45242778 | None:intergenic | 15.0% |
| !! | ACTATAAAAAAAAAATTTGC+AGG | + | chr4_1:45242760-45242779 | None:intergenic | 15.0% |
| !! | GGAAAAAAAATTAAAAATTC+TGG | - | chr4_1:45243184-45243203 | Msa0549930:intron | 15.0% |
| !!! | CGAAATTTTAATAAAAATTC+TGG | - | chr4_1:45243339-45243358 | Msa0549930:intron | 15.0% |
| !!! | TAAAAATTCTGAAAAAATTC+TGG | - | chr4_1:45243392-45243411 | Msa0549930:intron | 15.0% |
| !! | TATTTATAAATCGAGAATAA+GGG | + | chr4_1:45243545-45243564 | None:intergenic | 15.0% |
| !!! | ATTTTTGTGTATTTATAAAC+CGG | + | chr4_1:45243579-45243598 | None:intergenic | 15.0% |
| !! | TTTATTTCCAAAAAAATTTC+CGG | + | chr4_1:45243721-45243740 | None:intergenic | 15.0% |
| !! | TTTGGAAAAAATTAAAATTC+TGG | + | chr4_1:45243817-45243836 | None:intergenic | 15.0% |
| !! | GAAAAATTCATAAAAAATTC+TGG | + | chr4_1:45244108-45244127 | None:intergenic | 15.0% |
| !!! | ATTTTTTTATTACATAACTG+GGG | - | chr4_1:45244239-45244258 | Msa0549930:intron | 15.0% |
| !!! | AAACTATAAAATTTTTTTGC+AGG | - | chr4_1:45244335-45244354 | Msa0549930:intron | 15.0% |
| !!! | AACTATAAAATTTTTTTGCA+GGG | - | chr4_1:45244336-45244355 | Msa0549930:intron | 15.0% |
| !!! | ATTTAATTTAGGCTTAAATA+TGG | + | chr4_1:45244400-45244419 | None:intergenic | 15.0% |
| !!! | TTTTTGACAGAATTTAATTT+AGG | + | chr4_1:45244411-45244430 | None:intergenic | 15.0% |
| !!! | TGTATATTTTAACATAAAAG+AGG | + | chr4_1:45245067-45245086 | None:intergenic | 15.0% |
| !!! | AATTATTTTTTCTTAAATGG+TGG | + | chr4_1:45245207-45245226 | None:intergenic | 15.0% |
| !! | TTACTAAAGACAATAAAATA+GGG | + | chr4_1:45245323-45245342 | None:intergenic | 15.0% |
| !! | ATTACTAAAGACAATAAAAT+AGG | + | chr4_1:45245324-45245343 | None:intergenic | 15.0% |
| !!! | GTTGTTTCATATTTTATAAT+AGG | - | chr4_1:45245371-45245390 | Msa0549930:intron | 15.0% |
| !! | TTGAAAAAAAATTGTATTAC+GGG | + | chr4_1:45245479-45245498 | None:intergenic | 15.0% |
| !!! | TATAATATGTTTTGAATAAG+AGG | - | chr4_1:45245639-45245658 | Msa0549930:intron | 15.0% |
| !!! | ATAATATGTTTTGAATAAGA+GGG | - | chr4_1:45245640-45245659 | Msa0549930:intron | 15.0% |
| !!! | ATTGTATATTTTAACATAAG+AGG | - | chr4_1:45245669-45245688 | Msa0549930:intron | 15.0% |
| !!! | TTGTATATTTTAACATAAGA+GGG | - | chr4_1:45245670-45245689 | Msa0549930:intron | 15.0% |
| !! | GTTTAAATAAATGGTATAAA+TGG | + | chr4_1:45245811-45245830 | None:intergenic | 15.0% |
| !! | TGATATATTAGTTAAAACAA+AGG | - | chr4_1:45245854-45245873 | Msa0549930:intron | 15.0% |
| !! | GATATATTAGTTAAAACAAA+GGG | - | chr4_1:45245855-45245874 | Msa0549930:intron | 15.0% |
| !! | TTGGAAAATAAATTCTAATA+AGG | - | chr4_1:45245891-45245910 | Msa0549930:intron | 15.0% |
| !!! | GATTTTTTATTTTATTCTCT+TGG | - | chr4_1:45246166-45246185 | Msa0549930:intron | 15.0% |
| !! | TTGTTGAATATTATGTTAAT+GGG | - | chr4_1:45247222-45247241 | Msa0549930:CDS | 15.0% |
| !! | TTGATATGAGTAGAAAATTA+GGG | + | chr4_1:45238337-45238356 | None:intergenic | 20.0% |
| !! | ATATATATATAGGATACTTG+GGG | + | chr4_1:45238997-45239016 | None:intergenic | 20.0% |
| !! | AGAAAATGTCAAAAATACTT+CGG | + | chr4_1:45239118-45239137 | None:intergenic | 20.0% |
| !!! | CTATATATGAAACACATTTT+CGG | - | chr4_1:45239713-45239732 | Msa0549930:intron | 20.0% |
| !!! | GTTTAAAATGTTGACATATT+TGG | + | chr4_1:45239835-45239854 | None:intergenic | 20.0% |
| !!! | TTTTAAACTCAATTTGAAAC+TGG | - | chr4_1:45239847-45239866 | Msa0549930:intron | 20.0% |
| !!! | TTTAAACTCAATTTGAAACT+GGG | - | chr4_1:45239848-45239867 | Msa0549930:intron | 20.0% |
| !!! | GTGTAATTTTTGAAAATTCA+GGG | - | chr4_1:45240158-45240177 | Msa0549930:intron | 20.0% |
| !! | TTCAAGCACATTTAATTAAT+TGG | - | chr4_1:45240225-45240244 | Msa0549930:intron | 20.0% |
| !! | AATGCATAATAATATATGCA+AGG | - | chr4_1:45240731-45240750 | Msa0549930:intron | 20.0% |
| !!! | TATAGTTTTTTATTTTGTGG+TGG | + | chr4_1:45240776-45240795 | None:intergenic | 20.0% |
| !!! | AACTTGTTTAAGGATATAAT+TGG | - | chr4_1:45240890-45240909 | Msa0549930:intron | 20.0% |
| !!! | ACTCTTACTTTAGTTTTTTT+TGG | - | chr4_1:45241140-45241159 | Msa0549930:intron | 20.0% |
| !! | AGTTTAAATTTCCATTATAG+TGG | + | chr4_1:45241208-45241227 | None:intergenic | 20.0% |
| !! | ATAAAAAATTTCAGTCTCTA+GGG | + | chr4_1:45241477-45241496 | None:intergenic | 20.0% |
| !! | AAACTCAAAAAACAAAACAA+CGG | - | chr4_1:45241545-45241564 | Msa0549930:intron | 20.0% |
| !! | GTCTAAGAAATTCATAATTA+TGG | - | chr4_1:45241847-45241866 | Msa0549930:intron | 20.0% |
| !!! | AAAATTAGATTTTTTCGACT+GGG | + | chr4_1:45242111-45242130 | None:intergenic | 20.0% |
| !!! | AAAAATTAGATTTTTTCGAC+TGG | + | chr4_1:45242112-45242131 | None:intergenic | 20.0% |
| !! | AAGAAGAATATCAAATTACA+AGG | - | chr4_1:45242239-45242258 | Msa0549930:intron | 20.0% |
| !!! | ACAAAAAGATATATCAGTTT+TGG | + | chr4_1:45242401-45242420 | None:intergenic | 20.0% |
| !! | GTATTTATAAATCGAGAATA+AGG | + | chr4_1:45243546-45243565 | None:intergenic | 20.0% |
| !!! | TTTTTGTGTATTTATAAACC+GGG | + | chr4_1:45243578-45243597 | None:intergenic | 20.0% |
| !! | TATAAATACACAAAAATTCC+TGG | - | chr4_1:45243582-45243601 | Msa0549930:intron | 20.0% |
| !!! | TTTTCATTAGTATTTTTTCC+AGG | + | chr4_1:45243603-45243622 | None:intergenic | 20.0% |
| !! | TATTTATAAACCGAGAATAA+GGG | + | chr4_1:45243688-45243707 | None:intergenic | 20.0% |
| !! | TTATAAATACACAAAATTCC+CGG | - | chr4_1:45243699-45243718 | Msa0549930:intron | 20.0% |
| !! | TTATTTCCAAAAAAATTTCC+GGG | + | chr4_1:45243720-45243739 | None:intergenic | 20.0% |
| !! | GTAAAAAGTAATTAAGTCTA+GGG | + | chr4_1:45244598-45244617 | None:intergenic | 20.0% |
| !! | ATACTAGTAGTATATAGTAA+AGG | - | chr4_1:45244639-45244658 | Msa0549930:intron | 20.0% |
| !! | TACTAGTAGTATATAGTAAA+GGG | - | chr4_1:45244640-45244659 | Msa0549930:intron | 20.0% |
| !!! | TATTTTAACATAAAAGAGGA+GGG | + | chr4_1:45245063-45245082 | None:intergenic | 20.0% |
| !!! | ATATTTTAACATAAAAGAGG+AGG | + | chr4_1:45245064-45245083 | None:intergenic | 20.0% |
| !! | ATATTTAATTATTAAGGGAG+GGG | + | chr4_1:45245123-45245142 | None:intergenic | 20.0% |
| !! | CATATTTAATTATTAAGGGA+GGG | + | chr4_1:45245124-45245143 | None:intergenic | 20.0% |
| !! | ACATATTTAATTATTAAGGG+AGG | + | chr4_1:45245125-45245144 | None:intergenic | 20.0% |
| !!! | TAATATGTTTTGAATAAGAG+GGG | - | chr4_1:45245641-45245660 | Msa0549930:intron | 20.0% |
| !!! | TGTATATTTTAACATAAGAG+GGG | - | chr4_1:45245671-45245690 | Msa0549930:intron | 20.0% |
| !!! | AAAGGGAATGATATTTTAAT+TGG | - | chr4_1:45245872-45245891 | Msa0549930:intron | 20.0% |
| !! | GTTGTTGAATATTATGTTAA+TGG | - | chr4_1:45247221-45247240 | Msa0549930:CDS | 20.0% |
| ! | CTTGATATGAGTAGAAAATT+AGG | + | chr4_1:45238338-45238357 | None:intergenic | 25.0% |
| !! | CTAATTTTCTACTCATATCA+AGG | - | chr4_1:45238336-45238355 | Msa0549930:CDS | 25.0% |
| ! | AAAGAGATATTAATAACCAG+TGG | - | chr4_1:45238937-45238956 | Msa0549930:CDS | 25.0% |
| ! | TATATATATAGGATACTTGG+GGG | + | chr4_1:45238996-45239015 | None:intergenic | 25.0% |
| ! | GTATTATCCATAACATTACA+AGG | - | chr4_1:45239020-45239039 | Msa0549930:CDS | 25.0% |
| ! | GAAAATTCCTTGTAATGTTA+TGG | + | chr4_1:45239030-45239049 | None:intergenic | 25.0% |
| ! | AGAAGATGTCAAAAATACTT+CGG | + | chr4_1:45239252-45239271 | None:intergenic | 25.0% |
| ! | TTGGTCAAGTTAATTTAGAT+AGG | + | chr4_1:45239816-45239835 | None:intergenic | 25.0% |
| ! | TATGTTGAAGAACAACAAAT+GGG | + | chr4_1:45239976-45239995 | None:intergenic | 25.0% |
| ! | ATATGTTGAAGAACAACAAA+TGG | + | chr4_1:45239977-45239996 | None:intergenic | 25.0% |
| ! | AGCATACAAACATAGATTAT+TGG | - | chr4_1:45240136-45240155 | Msa0549930:intron | 25.0% |
| !!! | GGTGTAATTTTTGAAAATTC+AGG | - | chr4_1:45240157-45240176 | Msa0549930:intron | 25.0% |
| ! | ATTAAATGTGCTTGAATTCA+GGG | + | chr4_1:45240221-45240240 | None:intergenic | 25.0% |
| ! | AATTAAATGTGCTTGAATTC+AGG | + | chr4_1:45240222-45240241 | None:intergenic | 25.0% |
| ! | AAACCTATTGTTCGTAATTT+AGG | + | chr4_1:45240383-45240402 | None:intergenic | 25.0% |
| ! | ATAATAATATATGCAAGGTC+CGG | - | chr4_1:45240736-45240755 | Msa0549930:intron | 25.0% |
| ! | CTAACAAATAGCATTCTTAT+AGG | - | chr4_1:45240863-45240882 | Msa0549930:intron | 25.0% |
| !! | TATAGGCAAAAACTTGTTTA+AGG | - | chr4_1:45240880-45240899 | Msa0549930:intron | 25.0% |
| !! | CCATGACTTCATAATATTTT+TGG | + | chr4_1:45241097-45241116 | None:intergenic | 25.0% |
| ! | CCAAAAATATTATGAAGTCA+TGG | - | chr4_1:45241094-45241113 | Msa0549930:intron | 25.0% |
| ! | CATAAAAAATTTCAGTCTCT+AGG | + | chr4_1:45241478-45241497 | None:intergenic | 25.0% |
| ! | GAGCTCAAAATTAGATTTAT+AGG | + | chr4_1:45241580-45241599 | None:intergenic | 25.0% |
| !! | AATTTCAATTTTGCACGTTT+TGG | + | chr4_1:45241696-45241715 | None:intergenic | 25.0% |
| !! | ATTTCATTCCCTAATTTTGT+AGG | - | chr4_1:45241748-45241767 | Msa0549930:intron | 25.0% |
| ! | ACTAAAAAACTTCATTGTGA+TGG | + | chr4_1:45241796-45241815 | None:intergenic | 25.0% |
| !!! | ATCAAGAATTTTTCAAGACA+CGG | - | chr4_1:45241925-45241944 | Msa0549930:intron | 25.0% |
| !!! | AAATTAGATTTTTTCGACTG+GGG | + | chr4_1:45242110-45242129 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCAGGCATGTTT+AGG | + | chr4_1:45242156-45242175 | None:intergenic | 25.0% |
| !! | TTAGCATGATTAGATCTTTT+CGG | + | chr4_1:45242375-45242394 | None:intergenic | 25.0% |
| ! | TAAAGGCTTAAATATGGTAT+TGG | - | chr4_1:45242579-45242598 | Msa0549930:intron | 25.0% |
| !! | TTTTTGATCCTTGCAAAAAT+AGG | - | chr4_1:45242716-45242735 | Msa0549930:intron | 25.0% |
| !! | ATTTTTCCAGAATTTTTGCA+GGG | + | chr4_1:45242790-45242809 | None:intergenic | 25.0% |
| ! | TATAAATACACAAAAGTTCC+CGG | - | chr4_1:45243557-45243576 | Msa0549930:intron | 25.0% |
| !!! | CATATTTTTTCCCTTATTCT+CGG | - | chr4_1:45243675-45243694 | Msa0549930:intron | 25.0% |
| ! | GTATTTATAAACCGAGAATA+AGG | + | chr4_1:45243689-45243708 | None:intergenic | 25.0% |
| !!! | AAAATTCCCGGAAATTTTTT+TGG | - | chr4_1:45243711-45243730 | Msa0549930:intron | 25.0% |
| !! | TCCAAAAACAAAAATTTTGC+AGG | - | chr4_1:45244274-45244293 | Msa0549930:intron | 25.0% |
| !! | CCAAAAACAAAAATTTTGCA+GGG | - | chr4_1:45244275-45244294 | Msa0549930:intron | 25.0% |
| ! | TTTAGGCTTAAATATGGTAT+TGG | + | chr4_1:45244394-45244413 | None:intergenic | 25.0% |
| ! | GGTAAAAAGTAATTAAGTCT+AGG | + | chr4_1:45244599-45244618 | None:intergenic | 25.0% |
| ! | ACTAGTAGTATATAGTAAAG+GGG | - | chr4_1:45244641-45244660 | Msa0549930:intron | 25.0% |
| ! | GCAATAAAAAAGCAGATAAA+TGG | - | chr4_1:45244941-45244960 | Msa0549930:intron | 25.0% |
| ! | TGTAATTTAAGCATCTTTGA+GGG | + | chr4_1:45245037-45245056 | None:intergenic | 25.0% |
| !!! | ATTTTAACATAAAAGAGGAG+GGG | + | chr4_1:45245062-45245081 | None:intergenic | 25.0% |
| ! | GTAATTCAAGCATCTTATAA+GGG | + | chr4_1:45245097-45245116 | None:intergenic | 25.0% |
| ! | TGTAATTCAAGCATCTTATA+AGG | + | chr4_1:45245098-45245117 | None:intergenic | 25.0% |
| ! | TATTTAATTATTAAGGGAGG+GGG | + | chr4_1:45245122-45245141 | None:intergenic | 25.0% |
| !!! | AGTGTAGATTTTAACATAAG+AGG | - | chr4_1:45245566-45245585 | Msa0549930:intron | 25.0% |
| !!! | GTGTAGATTTTAACATAAGA+GGG | - | chr4_1:45245567-45245586 | Msa0549930:intron | 25.0% |
| !!! | TGTAGATTTTAACATAAGAG+GGG | - | chr4_1:45245568-45245587 | Msa0549930:intron | 25.0% |
| !!! | TTTTAGAGTGCAACATATAA+AGG | - | chr4_1:45245755-45245774 | Msa0549930:intron | 25.0% |
| !! | TTTAGAGTGCAACATATAAA+GGG | - | chr4_1:45245756-45245775 | Msa0549930:intron | 25.0% |
| !!! | ATCTTGATAATGATGAAGAA+AGG | + | chr4_1:45245973-45245992 | None:intergenic | 25.0% |
| ! | AATCAAAATAAGAGTCGTAA+TGG | - | chr4_1:45246014-45246033 | Msa0549930:intron | 25.0% |
| !!! | TTTTATTTTATTCTCTTGGC+AGG | - | chr4_1:45246170-45246189 | Msa0549930:intron | 25.0% |
| ! | CATGTTAAAATCAGAATTAG+TGG | - | chr4_1:45246230-45246249 | Msa0549930:intron | 25.0% |
| ! | TCTAATAAATTTGCCAATCT+CGG | + | chr4_1:45246432-45246451 | None:intergenic | 25.0% |
| !!! | AGGATATTTGTTTTCAATTC+TGG | - | chr4_1:45246906-45246925 | Msa0549930:intron | 25.0% |
| ! | TAATTCACGTGAATAATTAC+CGG | + | chr4_1:45247170-45247189 | None:intergenic | 25.0% |
| TGAGAAACAAAGAAGTCATT+AGG | + | chr4_1:45238419-45238438 | None:intergenic | 30.0% | |
| AAAAACACGAAAGATAACCT+GGG | + | chr4_1:45238486-45238505 | None:intergenic | 30.0% | |
| ! | ACTGTGATAGTGTTTGATTA+TGG | - | chr4_1:45238614-45238633 | Msa0549930:CDS | 30.0% |
| ! | ATTATGGCTTTTACTACATG+TGG | - | chr4_1:45238630-45238649 | Msa0549930:CDS | 30.0% |
| ! | TTATGGCTTTTACTACATGT+GGG | - | chr4_1:45238631-45238650 | Msa0549930:CDS | 30.0% |
| TCGATTCAATAATAGGTCAT+AGG | - | chr4_1:45239074-45239093 | Msa0549930:CDS | 30.0% | |
| TGTCAAAAATACTTCGGAAA+GGG | + | chr4_1:45239112-45239131 | None:intergenic | 30.0% | |
| ATGTCAAAAATACTTCGGAA+AGG | + | chr4_1:45239113-45239132 | None:intergenic | 30.0% | |
| TCGATTCAATAATAGGTCAT+AGG | - | chr4_1:45239074-45239093 | Msa0549930:CDS | 30.0% | |
| TCATAGGTCCATTCAATAAT+AGG | - | chr4_1:45239182-45239201 | Msa0549930:CDS | 30.0% | |
| TCGATTCAATAATAGGTCAT+AGG | - | chr4_1:45239074-45239093 | Msa0549930:CDS | 30.0% | |
| TGTCAAAAATACTTCGGAAA+GGG | + | chr4_1:45239112-45239131 | None:intergenic | 30.0% | |
| ATGTCAAAAATACTTCGGAA+AGG | + | chr4_1:45239113-45239132 | None:intergenic | 30.0% | |
| ATCTTGACTTAATTTCTTGG+GGG | + | chr4_1:45239453-45239472 | None:intergenic | 30.0% | |
| GATCTTGACTTAATTTCTTG+GGG | + | chr4_1:45239454-45239473 | None:intergenic | 30.0% | |
| GGATCTTGACTTAATTTCTT+GGG | + | chr4_1:45239455-45239474 | None:intergenic | 30.0% | |
| TTAAATGTGCTTGAATTCAG+GGG | + | chr4_1:45240220-45240239 | None:intergenic | 30.0% | |
| TAATAATATATGCAAGGTCC+GGG | - | chr4_1:45240737-45240756 | Msa0549930:intron | 30.0% | |
| !!! | TTTTTTATTTTGTGGTGGTC+GGG | + | chr4_1:45240771-45240790 | None:intergenic | 30.0% |
| !!! | GTTTTTTATTTTGTGGTGGT+CGG | + | chr4_1:45240772-45240791 | None:intergenic | 30.0% |
| ACGAATCAAGCAATTAAGTT+AGG | - | chr4_1:45240979-45240998 | Msa0549930:intron | 30.0% | |
| CATCAAATGACAAATCCTTT+GGG | - | chr4_1:45241019-45241038 | Msa0549930:intron | 30.0% | |
| TAATTCAAAGTTTGTCCCAA+AGG | + | chr4_1:45241037-45241056 | None:intergenic | 30.0% | |
| CAAACTTTGCGTATAATACA+GGG | + | chr4_1:45241350-45241369 | None:intergenic | 30.0% | |
| TCAAACTTTGCGTATAATAC+AGG | + | chr4_1:45241351-45241370 | None:intergenic | 30.0% | |
| TAACCATGCCTACAAAATTA+GGG | + | chr4_1:45241759-45241778 | None:intergenic | 30.0% | |
| CATGAAATAATTCAACCTCT+AGG | - | chr4_1:45242176-45242195 | Msa0549930:intron | 30.0% | |
| TTGGACTACGTCTATAATAT+AGG | - | chr4_1:45242207-45242226 | Msa0549930:intron | 30.0% | |
| TGGACTACGTCTATAATATA+GGG | - | chr4_1:45242208-45242227 | Msa0549930:intron | 30.0% | |
| GCAGTAGAAAAACAGATAAA+CGG | - | chr4_1:45242433-45242452 | Msa0549930:intron | 30.0% | |
| ! | TCTAAAGGAGACACAATTTT+GGG | - | chr4_1:45242488-45242507 | Msa0549930:intron | 30.0% |
| !!! | TTGTCAAAAGTTTTAGACGA+AGG | + | chr4_1:45242538-45242557 | None:intergenic | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+GGG | + | chr4_1:45242666-45242685 | None:intergenic | 30.0% |
| !!! | AAAACTGACCTATTTTTGCA+AGG | + | chr4_1:45242666-45242685 | None:intergenic | 30.0% |
| ! | TTGCAAAAATAGGTCAGTTT+TGG | - | chr4_1:45242726-45242745 | Msa0549930:intron | 30.0% |
| ! | TTTTTCCAGAATTTTTGCAG+GGG | + | chr4_1:45242789-45242808 | None:intergenic | 30.0% |
| ! | CATTTTTCCAGAATTTTTGC+AGG | + | chr4_1:45242791-45242810 | None:intergenic | 30.0% |
| ATACACAAAAAACCTAAGCT+CGG | - | chr4_1:45243640-45243659 | Msa0549930:intron | 30.0% | |
| TGTATTTATAAACCGAGCTT+AGG | + | chr4_1:45243655-45243674 | None:intergenic | 30.0% | |
| !!! | CCCTGCAAAATTTTTGTTTT+TGG | + | chr4_1:45244278-45244297 | None:intergenic | 30.0% |
| GGGTAAAATTGACAGAAAAA+TGG | + | chr4_1:45244578-45244597 | None:intergenic | 30.0% | |
| CGCAACAATAAAAACAACAT+TGG | - | chr4_1:45244737-45244756 | Msa0549930:intron | 30.0% | |
| CGCAACAATAAAAACAACAT+TGG | - | chr4_1:45244737-45244756 | Msa0549930:intron | 30.0% | |
| ATTTATAACCGGTTGAAAGA+TGG | + | chr4_1:45244983-45245002 | None:intergenic | 30.0% | |
| GTAATTTAAGCATCTTTGAG+GGG | + | chr4_1:45245036-45245055 | None:intergenic | 30.0% | |
| GTGTAATTTAAGCATCTTTG+AGG | + | chr4_1:45245038-45245057 | None:intergenic | 30.0% | |
| ATGTAATTCAAGCTTCTCTT+AGG | - | chr4_1:45245597-45245616 | Msa0549930:intron | 30.0% | |
| TGTAATTCAAGCTTCTCTTA+GGG | - | chr4_1:45245598-45245617 | Msa0549930:intron | 30.0% | |
| !!! | ATATTTTAACATAAGAGGGG+AGG | - | chr4_1:45245674-45245693 | Msa0549930:intron | 30.0% |
| !!! | TATTTTAACATAAGAGGGGA+GGG | - | chr4_1:45245675-45245694 | Msa0549930:intron | 30.0% |
| TGTAATTCAAGCATCTTAGA+GGG | - | chr4_1:45245701-45245720 | Msa0549930:intron | 30.0% | |
| !! | GTTGCACTCTAAAATTTGAT+AGG | + | chr4_1:45245749-45245768 | None:intergenic | 30.0% |
| ! | TTACAAGTTGAAGTTAGAGA+TGG | + | chr4_1:45245940-45245959 | None:intergenic | 30.0% |
| CATTATCAAGATTATGTGAG+AGG | - | chr4_1:45245981-45246000 | Msa0549930:intron | 30.0% | |
| ! | CTATAAGAACTCTGATTTTG+GGG | + | chr4_1:45246087-45246106 | None:intergenic | 30.0% |
| ! | CCTATAAGAACTCTGATTTT+GGG | + | chr4_1:45246088-45246107 | None:intergenic | 30.0% |
| ! | TCCTATAAGAACTCTGATTT+TGG | + | chr4_1:45246089-45246108 | None:intergenic | 30.0% |
| GAAACAAAGAAGTCATTGTT+GGG | + | chr4_1:45246141-45246160 | None:intergenic | 30.0% | |
| AGAAACAAAGAAGTCATTGT+TGG | + | chr4_1:45246142-45246161 | None:intergenic | 30.0% | |
| TTAAGTAAACAGGAAAAAGC+TGG | - | chr4_1:45246342-45246361 | Msa0549930:intron | 30.0% | |
| CTAATAAATTTGCCAATCTC+GGG | + | chr4_1:45246431-45246450 | None:intergenic | 30.0% | |
| TATACCAACTCTCTTGATAT+TGG | + | chr4_1:45246532-45246551 | None:intergenic | 30.0% | |
| AAGGCAACAACTAGATAATT+AGG | + | chr4_1:45246555-45246574 | None:intergenic | 30.0% | |
| ! | TTTTGCAATCTCATCATCTA+AGG | + | chr4_1:45246574-45246593 | None:intergenic | 30.0% |
| ACGGTATCAATATCATTATC+CGG | + | chr4_1:45246636-45246655 | None:intergenic | 30.0% | |
| GATAATGATATTGATACCGT+TGG | - | chr4_1:45246636-45246655 | Msa0549930:intron | 30.0% | |
| TAGAATACGAAATTTAAGCC+CGG | + | chr4_1:45246688-45246707 | None:intergenic | 30.0% | |
| ! | TCTAAGAGAATTTTTGCAGT+TGG | - | chr4_1:45246704-45246723 | Msa0549930:intron | 30.0% |
| ! | CTAAGAGAATTTTTGCAGTT+GGG | - | chr4_1:45246705-45246724 | Msa0549930:intron | 30.0% |
| CATAATAACATGACAGCTTA+TGG | - | chr4_1:45246825-45246844 | Msa0549930:intron | 30.0% | |
| ATTGAAAACAAATATCCTCG+TGG | + | chr4_1:45246904-45246923 | None:intergenic | 30.0% | |
| TAACCTCAGTAAATTGAAAC+CGG | - | chr4_1:45247148-45247167 | Msa0549930:CDS | 30.0% | |
| TTAGGGTTGTTCTTCATCAA+GGG | + | chr4_1:45238320-45238339 | None:intergenic | 35.0% | |
| ATTAGGGTTGTTCTTCATCA+AGG | + | chr4_1:45238321-45238340 | None:intergenic | 35.0% | |
| AAGAACTCCAATGATTACAG+CGG | + | chr4_1:45238369-45238388 | None:intergenic | 35.0% | |
| GTAATCATTGGAGTTCTTAC+TGG | - | chr4_1:45238371-45238390 | Msa0549930:CDS | 35.0% | |
| GAAAAACACGAAAGATAACC+TGG | + | chr4_1:45238487-45238506 | None:intergenic | 35.0% | |
| GAGATATTAATAACCAGTGG+CGG | - | chr4_1:45238940-45238959 | Msa0549930:CDS | 35.0% | |
| !! | TAGGTCGTCGATTCAATAAT+AGG | - | chr4_1:45239159-45239178 | Msa0549930:CDS | 35.0% |
| ATCGACGACCTATTATTGAA+TGG | + | chr4_1:45239193-45239212 | None:intergenic | 35.0% | |
| !! | TAGGTCGTCGATTCAATAAT+AGG | - | chr4_1:45239159-45239178 | Msa0549930:CDS | 35.0% |
| !!! | TCTTCGTGGGAACATTTTTT+TGG | + | chr4_1:45239298-45239317 | None:intergenic | 35.0% |
| !! | GGTGGTTTGATTTTCTGAAA+AGG | + | chr4_1:45239344-45239363 | None:intergenic | 35.0% |
| GACAATAATAAGTGTTCTGG+TGG | + | chr4_1:45239362-45239381 | None:intergenic | 35.0% | |
| GCAGACAATAATAAGTGTTC+TGG | + | chr4_1:45239365-45239384 | None:intergenic | 35.0% | |
| CGGATCTTGACTTAATTTCT+TGG | + | chr4_1:45239456-45239475 | None:intergenic | 35.0% | |
| ! | AGTGGCATTGTTATTAACAG+TGG | + | chr4_1:45239479-45239498 | None:intergenic | 35.0% |
| TACCTGAGACAGTTGTAAAA+TGG | + | chr4_1:45239537-45239556 | None:intergenic | 35.0% | |
| TCCTGACTTTATGATCTCAA+GGG | + | chr4_1:45239575-45239594 | None:intergenic | 35.0% | |
| ATCCTGACTTTATGATCTCA+AGG | + | chr4_1:45239576-45239595 | None:intergenic | 35.0% | |
| GGTGCATAAGTAAAATCTCA+GGG | - | chr4_1:45240104-45240123 | Msa0549930:intron | 35.0% | |
| ACGCCTAAATTACGAACAAT+AGG | - | chr4_1:45240377-45240396 | Msa0549930:intron | 35.0% | |
| !! | AAATGTTAACTTGTGCCCTT+GGG | - | chr4_1:45240411-45240430 | Msa0549930:intron | 35.0% |
| AATAATATATGCAAGGTCCG+GGG | - | chr4_1:45240738-45240757 | Msa0549930:intron | 35.0% | |
| !!! | TTTTTATTTTGTGGTGGTCG+GGG | + | chr4_1:45240770-45240789 | None:intergenic | 35.0% |
| ! | CCAAAGGATTTGTCATTTGA+TGG | + | chr4_1:45241021-45241040 | None:intergenic | 35.0% |
| CCATCAAATGACAAATCCTT+TGG | - | chr4_1:45241018-45241037 | Msa0549930:intron | 35.0% | |
| TGAATTAGCAGAGTCTCATT+CGG | - | chr4_1:45241050-45241069 | Msa0549930:intron | 35.0% | |
| TAGGAACAACACCACTATAA+TGG | - | chr4_1:45241194-45241213 | Msa0549930:intron | 35.0% | |
| ! | ATTCCCTAATTTTGTAGGCA+TGG | - | chr4_1:45241753-45241772 | Msa0549930:intron | 35.0% |
| CTAACCATGCCTACAAAATT+AGG | + | chr4_1:45241760-45241779 | None:intergenic | 35.0% | |
| !!! | AGAATTTTTCAAGACACGGT+TGG | - | chr4_1:45241929-45241948 | Msa0549930:intron | 35.0% |
| GGCAAATAGTGCATTGTAAT+TGG | - | chr4_1:45242016-45242035 | Msa0549930:intron | 35.0% | |
| TTCGACTGGGGATAAATTAA+TGG | + | chr4_1:45242098-45242117 | None:intergenic | 35.0% | |
| TAGAGCTACTATCAGAAAGA+CGG | + | chr4_1:45242472-45242491 | None:intergenic | 35.0% | |
| !! | CTTTCTGATAGTAGCTCTAA+AGG | - | chr4_1:45242473-45242492 | Msa0549930:intron | 35.0% |
| !! | CTCTAAAGGAGACACAATTT+TGG | - | chr4_1:45242487-45242506 | Msa0549930:intron | 35.0% |
| ! | TTTTAGACGAAGGTTAAAGC+CGG | + | chr4_1:45242528-45242547 | None:intergenic | 35.0% |
| !! | CAAAATTGGCCTATTTTGCA+GGG | + | chr4_1:45242606-45242625 | None:intergenic | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | - | chr4_1:45242655-45242674 | Msa0549930:intron | 35.0% |
| !!! | CAAAACTGACCTATTTTTGC+AGG | + | chr4_1:45242667-45242686 | None:intergenic | 35.0% |
| ! | CTGCAAAAATAGGTCAGTTT+TGG | - | chr4_1:45242665-45242684 | Msa0549930:intron | 35.0% |
| TTTATTACATAACTGGGGTC+AGG | - | chr4_1:45244244-45244263 | Msa0549930:intron | 35.0% | |
| !!! | AAAACTGGCCTATTTTTGCA+GGG | - | chr4_1:45244307-45244326 | Msa0549930:intron | 35.0% |
| !! | TTTTTGGTCCCTGCAAAAAT+AGG | + | chr4_1:45242655-45242674 | None:intergenic | 35.0% |
| !! | CAAAACTAGCCTATTTTGCA+GGG | - | chr4_1:45244367-45244386 | Msa0549930:intron | 35.0% |
| TATGAGCTATCCACAACAAT+AGG | - | chr4_1:45244484-45244503 | Msa0549930:intron | 35.0% | |
| CAATCTTGTTCCTATTGTTG+TGG | + | chr4_1:45244497-45244516 | None:intergenic | 35.0% | |
| CACAACAATAGGAACAAGAT+TGG | - | chr4_1:45244495-45244514 | Msa0549930:intron | 35.0% | |
| TCAAGACGTGCACAATAAAA+TGG | + | chr4_1:45244620-45244639 | None:intergenic | 35.0% | |
| ATCAGTTTCCATCTTTCAAC+CGG | - | chr4_1:45244972-45244991 | Msa0549930:intron | 35.0% | |
| TTCAAGCATCTTATAAGGGA+GGG | + | chr4_1:45245093-45245112 | None:intergenic | 35.0% | |
| ATTCAAGCATCTTATAAGGG+AGG | + | chr4_1:45245094-45245113 | None:intergenic | 35.0% | |
| !! | ATTTTAACATAAGAGGGGAG+AGG | - | chr4_1:45245573-45245592 | Msa0549930:intron | 35.0% |
| GTAATTCAAGCTTCTCTTAG+GGG | - | chr4_1:45245599-45245618 | Msa0549930:intron | 35.0% | |
| !! | TATGTTTTGAATAAGAGGGG+AGG | - | chr4_1:45245644-45245663 | Msa0549930:intron | 35.0% |
| !! | ATGTTTTGAATAAGAGGGGA+GGG | - | chr4_1:45245645-45245664 | Msa0549930:intron | 35.0% |
| !! | ATTTTAACATAAGAGGGGAG+GGG | - | chr4_1:45245573-45245592 | Msa0549930:intron | 35.0% |
| GTGTAATTCAAGCATCTTAG+AGG | - | chr4_1:45245700-45245719 | Msa0549930:intron | 35.0% | |
| GTAATTCAAGCATCTTAGAG+GGG | - | chr4_1:45245702-45245721 | Msa0549930:intron | 35.0% | |
| !!! | GTTATGGGGTTTTGAAGATT+TGG | + | chr4_1:45246065-45246084 | None:intergenic | 35.0% |
| !!! | AACTCTGATTTTGGGGTTAT+GGG | + | chr4_1:45246080-45246099 | None:intergenic | 35.0% |
| CCCAAAATCAGAGTTCTTAT+AGG | - | chr4_1:45246085-45246104 | Msa0549930:intron | 35.0% | |
| AGAATTAGTGGCACTCTTAT+CGG | - | chr4_1:45246242-45246261 | Msa0549930:intron | 35.0% | |
| GTTGCTTGCATTAAGTAAAC+AGG | - | chr4_1:45246332-45246351 | Msa0549930:intron | 35.0% | |
| ATTCATCAGGAGCAACAATA+GGG | + | chr4_1:45246401-45246420 | None:intergenic | 35.0% | |
| AATTCATCAGGAGCAACAAT+AGG | + | chr4_1:45246402-45246421 | None:intergenic | 35.0% | |
| ! | CTTCACATTTGAGTTTGCAA+GGG | + | chr4_1:45246487-45246506 | None:intergenic | 35.0% |
| TTCACCAATATCAAGAGAGT+TGG | - | chr4_1:45246525-45246544 | Msa0549930:intron | 35.0% | |
| CGGTATCAATATCATTATCC+GGG | + | chr4_1:45246635-45246654 | None:intergenic | 35.0% | |
| ACCGTTGGAAAAATTCCAAA+CGG | - | chr4_1:45246651-45246670 | Msa0549930:intron | 35.0% | |
| !! | ACCGTTTGGAATTTTTCCAA+CGG | + | chr4_1:45246655-45246674 | None:intergenic | 35.0% |
| TCACGGTATAGATGATCAAA+AGG | + | chr4_1:45246777-45246796 | None:intergenic | 35.0% | |
| TGATCATCTATACCGTGATT+CGG | - | chr4_1:45246779-45246798 | Msa0549930:intron | 35.0% | |
| CAAAAGCTCAATTGAAGGAA+TGG | + | chr4_1:45246952-45246971 | None:intergenic | 35.0% | |
| ! | CATTCCTTCAATTGAGCTTT+TGG | - | chr4_1:45246950-45246969 | Msa0549930:intron | 35.0% |
| AAAGAGTTCCTCGTTGAAAA+CGG | + | chr4_1:45247021-45247040 | None:intergenic | 35.0% | |
| TCATGCTGCTAAAAGAACTA+TGG | - | chr4_1:45247070-45247089 | Msa0549930:intron | 35.0% | |
| !! | TTACCGGTTTCAATTTACTG+AGG | + | chr4_1:45247154-45247173 | None:intergenic | 35.0% |
| ATTGGGCTCAGAGAAAAAGA+AGG | - | chr4_1:45238293-45238312 | Msa0549930:CDS | 40.0% | |
| ATCGTTACCGCTGTAATCAT+TGG | - | chr4_1:45238359-45238378 | Msa0549930:CDS | 40.0% | |
| AACAAAAACAGTGACGTCAG+AGG | + | chr4_1:45238587-45238606 | None:intergenic | 40.0% | |
| TTACTACATGTGGGTCATTG+TGG | - | chr4_1:45238640-45238659 | Msa0549930:CDS | 40.0% | |
| !! | TGATTTTCTGAAAAGGAGCG+TGG | + | chr4_1:45239337-45239356 | None:intergenic | 40.0% |
| !! | GTGGAGTGTTCATAGCATTT+TGG | - | chr4_1:45239425-45239444 | Msa0549930:intron | 40.0% |
| ! | GGCATTGTTATTAACAGTGG+CGG | + | chr4_1:45239476-45239495 | None:intergenic | 40.0% |
| ! | GACCATTTTACAACTGTCTC+AGG | - | chr4_1:45239532-45239551 | Msa0549930:intron | 40.0% |
| TCCCTTGAGATCATAAAGTC+AGG | - | chr4_1:45239571-45239590 | Msa0549930:intron | 40.0% | |
| GTTGAAGAACAACAAATGGG+TGG | + | chr4_1:45239973-45239992 | None:intergenic | 40.0% | |
| AAGAAACGATTGACGAGCAA+CGG | + | chr4_1:45240017-45240036 | None:intergenic | 40.0% | |
| GGGTGCATAAGTAAAATCTC+AGG | - | chr4_1:45240103-45240122 | Msa0549930:intron | 40.0% | |
| !! | GAAATGTTAACTTGTGCCCT+TGG | - | chr4_1:45240410-45240429 | Msa0549930:intron | 40.0% |
| !! | AGCTCCTTAACTTGTGTCTT+AGG | - | chr4_1:45240548-45240567 | Msa0549930:intron | 40.0% |
| !! | GCTCCTTAACTTGTGTCTTA+GGG | - | chr4_1:45240549-45240568 | Msa0549930:intron | 40.0% |
| !!! | CAGTCTCTAGGGTGATTTTT+TGG | + | chr4_1:45241466-45241485 | None:intergenic | 40.0% |
| CTATTTGCCACAATTCAAGG+AGG | + | chr4_1:45242005-45242024 | None:intergenic | 40.0% | |
| GCACTATTTGCCACAATTCA+AGG | + | chr4_1:45242008-45242027 | None:intergenic | 40.0% | |
| ! | GCATGTTTAGGACGTCAAAA+TGG | + | chr4_1:45242144-45242163 | None:intergenic | 40.0% |
| !!! | CAACCTCTAGGTCACTTTTT+TGG | - | chr4_1:45242188-45242207 | Msa0549930:intron | 40.0% |
| AGTCCAAAAAAGTGACCTAG+AGG | + | chr4_1:45242194-45242213 | None:intergenic | 40.0% | |
| !!! | TTGGGCTGAATTTTTTGTCC+CGG | - | chr4_1:45242506-45242525 | Msa0549930:intron | 40.0% |
| TTTAGACGAAGGTTAAAGCC+GGG | + | chr4_1:45242527-45242546 | None:intergenic | 40.0% | |
| !! | CCAAAATTGGCCTATTTTGC+AGG | + | chr4_1:45242607-45242626 | None:intergenic | 40.0% |
| ! | CCTGCAAAATAGGCCAATTT+TGG | - | chr4_1:45242604-45242623 | Msa0549930:intron | 40.0% |
| GCAGGGACTAAAACCAAAAT+TGG | + | chr4_1:45242620-45242639 | None:intergenic | 40.0% | |
| ! | CTGCAAAAATAGGCCAGTTT+TGG | + | chr4_1:45244308-45244327 | None:intergenic | 40.0% |
| !!! | CAAAACTGGCCTATTTTTGC+AGG | - | chr4_1:45244306-45244325 | Msa0549930:intron | 40.0% |
| !!! | CCTGCAAAATAGGCTAGTTT+TGG | + | chr4_1:45244369-45244388 | None:intergenic | 40.0% |
| !! | CCAAAACTAGCCTATTTTGC+AGG | - | chr4_1:45244366-45244385 | Msa0549930:intron | 40.0% |
| ! | ATTTAAGCATCTTTGAGGGG+AGG | + | chr4_1:45245033-45245052 | None:intergenic | 40.0% |
| TCAAGCATCTTATAAGGGAG+GGG | + | chr4_1:45245092-45245111 | None:intergenic | 40.0% | |
| !! | TGTTTTGAATAAGAGGGGAG+GGG | - | chr4_1:45245646-45245665 | Msa0549930:intron | 40.0% |
| !!! | ACTCTGATTTTGGGGTTATG+GGG | + | chr4_1:45246079-45246098 | None:intergenic | 40.0% |
| !!! | GAACTCTGATTTTGGGGTTA+TGG | + | chr4_1:45246081-45246100 | None:intergenic | 40.0% |
| AAATGCAGAGCTGAAAAACC+AGG | - | chr4_1:45246269-45246288 | Msa0549930:intron | 40.0% | |
| !!! | CAAGCAACTTTTTTTCAGCC+TGG | + | chr4_1:45246320-45246339 | None:intergenic | 40.0% |
| AATGCCTTGACAGTACCAAA+AGG | + | chr4_1:45246369-45246388 | None:intergenic | 40.0% | |
| TGAATTCTTGAACCCGAGAT+TGG | - | chr4_1:45246416-45246435 | Msa0549930:intron | 40.0% | |
| ! | CCTTCACATTTGAGTTTGCA+AGG | + | chr4_1:45246488-45246507 | None:intergenic | 40.0% |
| CCTTGCAAACTCAAATGTGA+AGG | - | chr4_1:45246485-45246504 | Msa0549930:intron | 40.0% | |
| AAATGTGAAGGAAATGCTCG+AGG | - | chr4_1:45246497-45246516 | Msa0549930:intron | 40.0% | |
| TATCATTATCCGGGTCTCTT+TGG | + | chr4_1:45246626-45246645 | None:intergenic | 40.0% | |
| TGGAAAAATTCCAAACGGTG+CGG | - | chr4_1:45246656-45246675 | Msa0549930:intron | 40.0% | |
| GTTATTATGACCATCGCTCA+TGG | + | chr4_1:45246814-45246833 | None:intergenic | 40.0% | |
| AACGATGTCTTCAAAGACCA+TGG | - | chr4_1:45246852-45246871 | Msa0549930:intron | 40.0% | |
| ACGATGTCTTCAAAGACCAT+GGG | - | chr4_1:45246853-45246872 | Msa0549930:intron | 40.0% | |
| CTACTAACGTTTATACCACG+AGG | - | chr4_1:45246886-45246905 | Msa0549930:intron | 40.0% | |
| AGCTCAATTGAAGGAATGGT+TGG | + | chr4_1:45246948-45246967 | None:intergenic | 40.0% | |
| ! | CTCTTTTATCCATCACATCC+TGG | - | chr4_1:45247035-45247054 | Msa0549930:intron | 40.0% |
| ! | TGAACAGCAGAGTTCTTTTC+AGG | - | chr4_1:45247108-45247127 | Msa0549930:CDS | 40.0% |
| TCAACAACTGCTTTCATTCG+CGG | + | chr4_1:45247209-45247228 | None:intergenic | 40.0% | |
| AACAGGTAGGTGACGATTTG+AGG | + | chr4_1:45238450-45238469 | None:intergenic | 45.0% | |
| CGAAAGATAACCTGGGTCTT+GGG | + | chr4_1:45238479-45238498 | None:intergenic | 45.0% | |
| ACGAAAGATAACCTGGGTCT+TGG | + | chr4_1:45238480-45238499 | None:intergenic | 45.0% | |
| !! | TAACCAGTGGCGGATCTATT+TGG | - | chr4_1:45238950-45238969 | Msa0549930:CDS | 45.0% |
| !! | AACCAGTGGCGGATCTATTT+GGG | - | chr4_1:45238951-45238970 | Msa0549930:CDS | 45.0% |
| ! | GGAATTTTCAGTTGTCGCAG+TGG | - | chr4_1:45239041-45239060 | Msa0549930:CDS | 45.0% |
| TTTCAGTTGTCGCAGTGGAT+AGG | - | chr4_1:45239046-45239065 | Msa0549930:CDS | 45.0% | |
| TTCAGTTGTCGCAGTGGATA+GGG | - | chr4_1:45239047-45239066 | Msa0549930:CDS | 45.0% | |
| !! | GGGGGTGTCGATTCAATAAT+AGG | - | chr4_1:45239067-45239086 | Msa0549930:CDS | 45.0% |
| ! | TTTCTGAAAAGGAGCGTGGA+TGG | + | chr4_1:45239333-45239352 | None:intergenic | 45.0% |
| ! | CTCAATTTGAAACTGGGCCA+CGG | - | chr4_1:45239854-45239873 | Msa0549930:intron | 45.0% |
| ! | CCTATAACCCGTTTTGCCAT+GGG | + | chr4_1:45239909-45239928 | None:intergenic | 45.0% |
| ! | TCCTATAACCCGTTTTGCCA+TGG | + | chr4_1:45239910-45239929 | None:intergenic | 45.0% |
| GAAGAACAACAAATGGGTGG+CGG | + | chr4_1:45239970-45239989 | None:intergenic | 45.0% | |
| AGAAACGATTGACGAGCAAC+GGG | + | chr4_1:45240016-45240035 | None:intergenic | 45.0% | |
| AACTCTCTTCTCTCAGTCTC+TGG | - | chr4_1:45240076-45240095 | Msa0549930:intron | 45.0% | |
| ACTCTCTTCTCTCAGTCTCT+GGG | - | chr4_1:45240077-45240096 | Msa0549930:intron | 45.0% | |
| AATGTGCTTGAATTCAGGGG+CGG | + | chr4_1:45240217-45240236 | None:intergenic | 45.0% | |
| ATAAGAGAGTCGTCCAAACG+TGG | - | chr4_1:45240279-45240298 | Msa0549930:intron | 45.0% | |
| AGTCGTCCAAACGTGGAATT+GGG | - | chr4_1:45240286-45240305 | Msa0549930:intron | 45.0% | |
| GATTCACCCAATTCCACGTT+TGG | + | chr4_1:45240295-45240314 | None:intergenic | 45.0% | |
| !! | CCTTCTTAACTTGTGCCCAA+GGG | + | chr4_1:45240429-45240448 | None:intergenic | 45.0% |
| GTGCCCTAAGACACAAGTTA+AGG | + | chr4_1:45240555-45240574 | None:intergenic | 45.0% | |
| CCTGTGAGTATACGCTTAGT+AGG | + | chr4_1:45241724-45241743 | None:intergenic | 45.0% | |
| CCTACTAAGCGTATACTCAC+AGG | - | chr4_1:45241721-45241740 | Msa0549930:intron | 45.0% | |
| ! | AGGAGGTGTGGCTGAAAAAT+AGG | + | chr4_1:45241988-45242007 | None:intergenic | 45.0% |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | - | chr4_1:45242594-45242613 | Msa0549930:intron | 45.0% |
| TTTGGCCCCTGCAAAAATTC+TGG | - | chr4_1:45242781-45242800 | Msa0549930:intron | 45.0% | |
| GCAGGGACTAAAACCAAAAC+TGG | - | chr4_1:45244292-45244311 | Msa0549930:intron | 45.0% | |
| !! | GGTATTGGTCCCTGCAAAAT+AGG | + | chr4_1:45242594-45242613 | None:intergenic | 45.0% |
| ATTCAAGCTTCTCTTAGGGG+AGG | - | chr4_1:45245602-45245621 | Msa0549930:intron | 45.0% | |
| TTCAAGCTTCTCTTAGGGGA+GGG | - | chr4_1:45245603-45245622 | Msa0549930:intron | 45.0% | |
| ATTCAAGCATCTTAGAGGGG+AGG | - | chr4_1:45245705-45245724 | Msa0549930:intron | 45.0% | |
| TTCAAGCATCTTAGAGGGGA+GGG | - | chr4_1:45245706-45245725 | Msa0549930:intron | 45.0% | |
| GTTGACAGAAGGAAAAGACC+AGG | - | chr4_1:45246299-45246318 | Msa0549930:intron | 45.0% | |
| ! | CAGGAAAAAGCTGGACCTTT+TGG | - | chr4_1:45246351-45246370 | Msa0549930:intron | 45.0% |
| ! | TGGACCTTTTGGTACTGTCA+AGG | - | chr4_1:45246362-45246381 | Msa0549930:intron | 45.0% |
| ATCAGGAGCAACAATAGGGT+TGG | + | chr4_1:45246397-45246416 | None:intergenic | 45.0% | |
| CTCGGGTTCAAGAATTCATC+AGG | + | chr4_1:45246414-45246433 | None:intergenic | 45.0% | |
| TGAAGGAAATGCTCGAGGTA+TGG | - | chr4_1:45246502-45246521 | Msa0549930:intron | 45.0% | |
| CCGGGTCTCTTTGGTAAAAT+GGG | + | chr4_1:45246617-45246636 | None:intergenic | 45.0% | |
| ! | CCCATTTTACCAAAGAGACC+CGG | - | chr4_1:45246614-45246633 | Msa0549930:intron | 45.0% |
| TCCGGGTCTCTTTGGTAAAA+TGG | + | chr4_1:45246618-45246637 | None:intergenic | 45.0% | |
| TGGACTCAACATCCGAATCA+CGG | + | chr4_1:45246794-45246813 | None:intergenic | 45.0% | |
| TGTCTTCAAAGACCATGGGA+TGG | - | chr4_1:45246857-45246876 | Msa0549930:intron | 45.0% | |
| GTCTTCAAAGACCATGGGAT+GGG | - | chr4_1:45246858-45246877 | Msa0549930:intron | 45.0% | |
| CGGTCCAAAAGCTCAATTGA+AGG | + | chr4_1:45246957-45246976 | None:intergenic | 45.0% | |
| ! | AATTGAGCTTTTGGACCGTG+TGG | - | chr4_1:45246959-45246978 | Msa0549930:intron | 45.0% |
| ACTTTCGAAGGGGAATGCAT+GGG | - | chr4_1:45246989-45247008 | Msa0549930:intron | 45.0% | |
| CCATCACATCCTGGTTATGA+CGG | - | chr4_1:45247044-45247063 | Msa0549930:intron | 45.0% | |
| CATCACATCCTGGTTATGAC+GGG | - | chr4_1:45247045-45247064 | Msa0549930:intron | 45.0% | |
| !! | GAGTTCTTTTCAGGACAGTG+AGG | - | chr4_1:45247117-45247136 | Msa0549930:CDS | 45.0% |
| TCATTCGCGGAAGCTTATCA+CGG | + | chr4_1:45247196-45247215 | None:intergenic | 45.0% | |
| !! | GAAACGGTTTGAGAGCATCT+TGG | + | chr4_1:45247250-45247269 | None:intergenic | 45.0% |
| !!! | TAAAAAAATTATGTTTTTTT+TGG | + | chr4_1:45238780-45238799 | None:intergenic | 5.0% |
| !! | TGAAAAATTATTATTAATAA+TGG | - | chr4_1:45238902-45238921 | Msa0549930:CDS | 5.0% |
| !! | ATAATACTATATATATATAT+AGG | + | chr4_1:45239007-45239026 | None:intergenic | 5.0% |
| !!! | TGTTATTTTAATATATTTAT+AGG | - | chr4_1:45239140-45239159 | Msa0549930:CDS | 5.0% |
| !!! | AATTATATATTGTTTTTAAA+AGG | - | chr4_1:45239681-45239700 | Msa0549930:intron | 5.0% |
| !!! | ATATATGTTTTTTATTTTAT+AGG | - | chr4_1:45242267-45242286 | Msa0549930:intron | 5.0% |
| !!! | TAAAATAAACATTTTAAATT+GGG | + | chr4_1:45242342-45242361 | None:intergenic | 5.0% |
| !!! | TTAAAATAAACATTTTAAAT+TGG | + | chr4_1:45242343-45242362 | None:intergenic | 5.0% |
| !!! | AATTTTTTTTTTATAGTTTT+TGG | - | chr4_1:45242763-45242782 | Msa0549930:intron | 5.0% |
| !!! | AAAAATTTTTTAAAAAATTC+TGG | - | chr4_1:45242831-45242850 | Msa0549930:intron | 5.0% |
| !! | TAAAAAATATTAAAAAATTC+TGG | - | chr4_1:45242929-45242948 | Msa0549930:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr4_1:45242881-45242900 | Msa0549930:intron | 5.0% |
| !! | TAAAAAATATTAAAAAATTC+TGG | - | chr4_1:45242929-45242948 | Msa0549930:intron | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | - | chr4_1:45242881-45242900 | Msa0549930:intron | 5.0% |
| !! | TAAAAAATATTAAAAAATTC+TGG | - | chr4_1:45242929-45242948 | Msa0549930:intron | 5.0% |
| !! | AATTGAAAAATTAATAAAAA+TGG | - | chr4_1:45243004-45243023 | Msa0549930:intron | 5.0% |
| !! | GAAAAAAATTTAAAAAAATA+CGG | - | chr4_1:45243163-45243182 | Msa0549930:intron | 5.0% |
| !!! | TGAAATTTTAATAAAAATTT+TGG | + | chr4_1:45243789-45243808 | None:intergenic | 5.0% |
| !! | ATAAAAAATTTAAAAAATTC+TGG | + | chr4_1:45244070-45244089 | None:intergenic | 5.0% |
| !! | ATAAAAAAATAAAAAAATTC+TGG | + | chr4_1:45244137-45244156 | None:intergenic | 5.0% |
| !! | AAAAAAATATTAAAAAATTC+TGG | + | chr4_1:45242881-45242900 | None:intergenic | 5.0% |
| !!! | TTTATTTTATTATTTATAAC+CGG | + | chr4_1:45244994-45245013 | None:intergenic | 5.0% |
| !!! | ACATATTTTAATTTTATTTT+TGG | - | chr4_1:45245349-45245368 | Msa0549930:intron | 5.0% |
| !! | ATTATAATTGTTTAAATAAA+TGG | + | chr4_1:45245820-45245839 | None:intergenic | 5.0% |
| TCTTGGGTACAGCAACAGGT+AGG | + | chr4_1:45238463-45238482 | None:intergenic | 50.0% | |
| CGACTCACGAATTCAAGCAG+TGG | - | chr4_1:45238691-45238710 | Msa0549930:CDS | 50.0% | |
| ATTCAAGCAGTGGCGTATCC+AGG | - | chr4_1:45238701-45238720 | Msa0549930:CDS | 50.0% | |
| !! | ACCAGTGGCGGATCTATTTG+GGG | - | chr4_1:45238952-45238971 | Msa0549930:CDS | 50.0% |
| TCAGTTGTCGCAGTGGATAG+GGG | - | chr4_1:45239048-45239067 | Msa0549930:CDS | 50.0% | |
| TGGCCTCATTCTAAGTTCCG+TGG | + | chr4_1:45239874-45239893 | None:intergenic | 50.0% | |
| GTACAGAGCCCATGGCAAAA+CGG | - | chr4_1:45239898-45239917 | Msa0549930:intron | 50.0% | |
| TACAGAGCCCATGGCAAAAC+GGG | - | chr4_1:45239899-45239918 | Msa0549930:intron | 50.0% | |
| !! | CCCATGGCAAAACGGGTTAT+AGG | - | chr4_1:45239906-45239925 | Msa0549930:intron | 50.0% |
| TTCTCTCAGTCTCTGGGTCA+GGG | - | chr4_1:45240083-45240102 | Msa0549930:intron | 50.0% | |
| CAAGTGCACACCCTCACATA+GGG | - | chr4_1:45240185-45240204 | Msa0549930:intron | 50.0% | |
| GAGTCGTCCAAACGTGGAAT+TGG | - | chr4_1:45240285-45240304 | Msa0549930:intron | 50.0% | |
| CCCTTGGGCACAAGTTAAGA+AGG | - | chr4_1:45240426-45240445 | Msa0549930:intron | 50.0% | |
| !! | GCCTTCTTAACTTGTGCCCA+AGG | + | chr4_1:45240430-45240449 | None:intergenic | 50.0% |
| TTAGCAGAGTCTCATTCGGC+TGG | - | chr4_1:45241054-45241073 | Msa0549930:intron | 50.0% | |
| AGCCACACCTCCTTGAATTG+TGG | - | chr4_1:45241995-45242014 | Msa0549930:intron | 50.0% | |
| TGCCACAATTCAAGGAGGTG+TGG | + | chr4_1:45242000-45242019 | None:intergenic | 50.0% | |
| TCAAGCTTCTCTTAGGGGAG+GGG | - | chr4_1:45245604-45245623 | Msa0549930:intron | 50.0% | |
| TCAAGCATCTTAGAGGGGAG+GGG | - | chr4_1:45245707-45245726 | Msa0549930:intron | 50.0% | |
| CTTCTGTCAACTCACTCACC+TGG | + | chr4_1:45246290-45246309 | None:intergenic | 50.0% | |
| ! | CAGGTGAGTGAGTTGACAGA+AGG | - | chr4_1:45246288-45246307 | Msa0549930:intron | 50.0% |
| GATGTTGAGTCCATGAGCGA+TGG | - | chr4_1:45246801-45246820 | Msa0549930:intron | 50.0% | |
| TCAAAGACCATGGGATGGGT+TGG | - | chr4_1:45246862-45246881 | Msa0549930:intron | 50.0% | |
| TAGTAGACCAACCCATCCCA+TGG | + | chr4_1:45246872-45246891 | None:intergenic | 50.0% | |
| GACTTTCGAAGGGGAATGCA+TGG | - | chr4_1:45246988-45247007 | Msa0549930:intron | 50.0% | |
| GTTCCTCGTTGAAAACGGCT+TGG | + | chr4_1:45247016-45247035 | None:intergenic | 50.0% | |
| CCGTCATAACCAGGATGTGA+TGG | + | chr4_1:45247047-45247066 | None:intergenic | 50.0% | |
| TGGGTCTTGGGTACAGCAAC+AGG | + | chr4_1:45238467-45238486 | None:intergenic | 55.0% | |
| TGTTGCTGTACCCAAGACCC+AGG | - | chr4_1:45238466-45238485 | Msa0549930:CDS | 55.0% | |
| TCCCCAAATAGATCCGCCAC+TGG | + | chr4_1:45238956-45238975 | None:intergenic | 55.0% | |
| AGGATACTTGGGGGATGCCA+TGG | + | chr4_1:45238987-45239006 | None:intergenic | 55.0% | |
| CAGTTGTCGCAGTGGATAGG+GGG | - | chr4_1:45239049-45239068 | Msa0549930:CDS | 55.0% | |
| GTGCGTGTTCGAGTCTTCGT+GGG | + | chr4_1:45239311-45239330 | None:intergenic | 55.0% | |
| GGGCCACGGAACTTAGAATG+AGG | - | chr4_1:45239868-45239887 | Msa0549930:intron | 55.0% | |
| GCCATAGAGTACAGAGCCCA+TGG | - | chr4_1:45239890-45239909 | Msa0549930:intron | 55.0% | |
| GCCATGGGCTCTGTACTCTA+TGG | + | chr4_1:45239894-45239913 | None:intergenic | 55.0% | |
| CTTCTCTCAGTCTCTGGGTC+AGG | - | chr4_1:45240082-45240101 | Msa0549930:intron | 55.0% | |
| GCAAGTGCACACCCTCACAT+AGG | - | chr4_1:45240184-45240203 | Msa0549930:intron | 55.0% | |
| CCAGCGTTCAGACTTCGTGT+CGG | - | chr4_1:45240327-45240346 | Msa0549930:intron | 55.0% | |
| CAAGCTTCTCTTAGGGGAGG+GGG | - | chr4_1:45245605-45245624 | Msa0549930:intron | 55.0% | |
| AAGCTTCTCTTAGGGGAGGG+GGG | - | chr4_1:45245606-45245625 | Msa0549930:intron | 55.0% | |
| TCGAAAGTCGTGCTGCCACA+CGG | + | chr4_1:45246977-45246996 | None:intergenic | 55.0% | |
| TGTGGCAGCACGACTTTCGA+AGG | - | chr4_1:45246977-45246996 | Msa0549930:intron | 55.0% | |
| GTGGCAGCACGACTTTCGAA+GGG | - | chr4_1:45246978-45246997 | Msa0549930:intron | 55.0% | |
| TGGCAGCACGACTTTCGAAG+GGG | - | chr4_1:45246979-45246998 | Msa0549930:intron | 55.0% | |
| !! | GGACCAAGCCGTTTTCAACG+AGG | - | chr4_1:45247010-45247029 | Msa0549930:intron | 55.0% |
| GCATGAAGCCCGTCATAACC+AGG | + | chr4_1:45247056-45247075 | None:intergenic | 55.0% | |
| TTCGCGGAAGCTTATCACGG+TGG | + | chr4_1:45247193-45247212 | None:intergenic | 55.0% | |
| GCTCTCAAACCGTTTCCCGA+TGG | - | chr4_1:45247254-45247273 | Msa0549930:CDS | 55.0% | |
| GTATCCAGGACCCTGGACCA+GGG | - | chr4_1:45238715-45238734 | Msa0549930:CDS | 60.0% | |
| TATCCAGGACCCTGGACCAG+GGG | - | chr4_1:45238716-45238735 | Msa0549930:CDS | 60.0% | |
| TGCAAGAAGTCTGCACCCCC+TGG | + | chr4_1:45238735-45238754 | None:intergenic | 60.0% | |
| GCGGATCTATTTGGGGACCC+TGG | - | chr4_1:45238959-45238978 | Msa0549930:CDS | 60.0% | |
| ATTTGGGGACCCTGGAGCCA+TGG | - | chr4_1:45238967-45238986 | Msa0549930:CDS | 60.0% | |
| GGTGCGTGTTCGAGTCTTCG+TGG | + | chr4_1:45239312-45239331 | None:intergenic | 60.0% | |
| TGCACACCCTCACATAGGGC+TGG | - | chr4_1:45240189-45240208 | Msa0549930:intron | 60.0% | |
| GCGGATCCAGCCCTATGTGA+GGG | + | chr4_1:45240198-45240217 | None:intergenic | 60.0% | |
| CCGACACGAAGTCTGAACGC+TGG | + | chr4_1:45240330-45240349 | None:intergenic | 60.0% | |
| CGAGGTGTGCCATCGGGAAA+CGG | + | chr4_1:45247266-45247285 | None:intergenic | 60.0% | |
| CAGTGGCGTATCCAGGACCC+TGG | - | chr4_1:45238708-45238727 | Msa0549930:CDS | 65.0% | |
| CGTATCCAGGACCCTGGACC+AGG | - | chr4_1:45238714-45238733 | Msa0549930:CDS | 65.0% | |
| ATCCAGGACCCTGGACCAGG+GGG | - | chr4_1:45238717-45238736 | Msa0549930:CDS | 65.0% | |
| AGTCTGCACCCCCTGGTCCA+GGG | + | chr4_1:45238728-45238747 | None:intergenic | 65.0% | |
| AAGTCTGCACCCCCTGGTCC+AGG | + | chr4_1:45238729-45238748 | None:intergenic | 65.0% | |
| TGGGGGATGCCATGGCTCCA+GGG | + | chr4_1:45238979-45238998 | None:intergenic | 65.0% | |
| TTGGGGGATGCCATGGCTCC+AGG | + | chr4_1:45238980-45238999 | None:intergenic | 65.0% | |
| GGCGGATCCAGCCCTATGTG+AGG | + | chr4_1:45240199-45240218 | None:intergenic | 65.0% | |
| CCAAACGGTGCGGCTGTCTC+CGG | - | chr4_1:45246666-45246685 | Msa0549930:intron | 65.0% | |
| CAAACGGTGCGGCTGTCTCC+GGG | - | chr4_1:45246667-45246686 | Msa0549930:intron | 65.0% | |
| GGTGGTCGGGGTTCGAACCC+CGG | + | chr4_1:45240758-45240777 | None:intergenic | 70.0% | |
| CCGGAGACAGCCGCACCGTT+TGG | + | chr4_1:45246669-45246688 | None:intergenic | 70.0% | |
| CACCCCCTGGTCCAGGGTCC+TGG | + | chr4_1:45238722-45238741 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 45238290 | 45247289 | 45238290 | ID=Msa0549930;Name=Msa0549930 |
| chr4_1 | mRNA | 45238290 | 45247289 | 45238290 | ID=Msa0549930-mRNA-1;Parent=Msa0549930;Name=Msa0549930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|2|0|431 |
| chr4_1 | exon | 45247092 | 45247289 | 45247092 | ID=Msa0549930-mRNA-1:exon:11896;Parent=Msa0549930-mRNA-1 |
| chr4_1 | exon | 45238290 | 45239387 | 45238290 | ID=Msa0549930-mRNA-1:exon:11895;Parent=Msa0549930-mRNA-1 |
| chr4_1 | CDS | 45247092 | 45247289 | 45247092 | ID=Msa0549930-mRNA-1:cds;Parent=Msa0549930-mRNA-1 |
| chr4_1 | CDS | 45238290 | 45239387 | 45238290 | ID=Msa0549930-mRNA-1:cds;Parent=Msa0549930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
