Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579530 | XP_013456776.1 | 65.251 | 259 | 84 | 3 | 1 | 255 | 1 | 257 | 2.36e-98 | 300 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579530 | A0A072UM87 | 65.251 | 259 | 84 | 3 | 1 | 255 | 1 | 257 | 1.13e-98 | 300 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0010150 | Msa0579530 | 0.814830 | 1.261684e-51 | -8.615850e-47 |
| Msa0014590 | Msa0579530 | 0.809580 | 1.763947e-50 | -8.615850e-47 |
| Msa0024280 | Msa0579530 | 0.853331 | 2.565180e-61 | -8.615850e-47 |
| Msa0027860 | Msa0579530 | 0.838987 | 2.074460e-57 | -8.615850e-47 |
| Msa0034620 | Msa0579530 | 0.800098 | 1.690509e-48 | -8.615850e-47 |
| Msa0034770 | Msa0579530 | 0.807316 | 5.365589e-50 | -8.615850e-47 |
| Msa0048950 | Msa0579530 | 0.831246 | 1.861454e-55 | -8.615850e-47 |
| Msa0059880 | Msa0579530 | 0.858170 | 9.896566e-63 | -8.615850e-47 |
| Msa0072030 | Msa0579530 | 0.802295 | 6.002528e-49 | -8.615850e-47 |
| Msa0074620 | Msa0579530 | 0.804624 | 1.975498e-49 | -8.615850e-47 |
| Msa0075560 | Msa0579530 | 0.813893 | 2.032835e-51 | -8.615850e-47 |
| Msa0108350 | Msa0579530 | 0.824030 | 1.006617e-53 | -8.615850e-47 |
| Msa0120050 | Msa0579530 | 0.830063 | 3.625337e-55 | -8.615850e-47 |
| Msa0121910 | Msa0579530 | 0.808424 | 3.118017e-50 | -8.615850e-47 |
| Msa0123530 | Msa0579530 | 0.802634 | 5.111692e-49 | -8.615850e-47 |
| Msa0129850 | Msa0579530 | 0.835765 | 1.387262e-56 | -8.615850e-47 |
| Msa0143680 | Msa0579530 | 0.822028 | 2.948512e-53 | -8.615850e-47 |
| Msa0143710 | Msa0579530 | 0.814827 | 1.263640e-51 | -8.615850e-47 |
| Msa0143740 | Msa0579530 | 0.807261 | 5.511283e-50 | -8.615850e-47 |
| Msa0150910 | Msa0579530 | 0.852982 | 3.227913e-61 | -8.615850e-47 |
| Msa0150920 | Msa0579530 | 0.815014 | 1.148483e-51 | -8.615850e-47 |
| Msa0155850 | Msa0579530 | 0.805309 | 1.420493e-49 | -8.615850e-47 |
| Msa0163340 | Msa0579530 | 0.882790 | 7.748827e-71 | -8.615850e-47 |
| Msa0168010 | Msa0579530 | 0.809464 | 1.868289e-50 | -8.615850e-47 |
| Msa0177550 | Msa0579530 | 0.809810 | 1.573913e-50 | -8.615850e-47 |
| Msa0190670 | Msa0579530 | 0.804248 | 2.366215e-49 | -8.615850e-47 |
| Msa0190890 | Msa0579530 | 0.809688 | 1.671855e-50 | -8.615850e-47 |
| Msa0210850 | Msa0579530 | 0.804315 | 2.291057e-49 | -8.615850e-47 |
| Msa0212550 | Msa0579530 | 0.815568 | 8.648571e-52 | -8.615850e-47 |
| Msa0233210 | Msa0579530 | 0.806150 | 9.458962e-50 | -8.615850e-47 |
| Msa0364550 | Msa0579530 | 0.804564 | 2.033805e-49 | -8.615850e-47 |
| Msa0366510 | Msa0579530 | 0.830246 | 3.272341e-55 | -8.615850e-47 |
| Msa0414480 | Msa0579530 | 0.835167 | 1.964524e-56 | -8.615850e-47 |
| Msa0418160 | Msa0579530 | 0.835225 | 1.899359e-56 | -8.615850e-47 |
| Msa0444250 | Msa0579530 | 0.840409 | 8.848919e-58 | -8.615850e-47 |
| Msa0448310 | Msa0579530 | 0.803789 | 2.947222e-49 | -8.615850e-47 |
| Msa0464300 | Msa0579530 | 0.804972 | 1.670883e-49 | -8.615850e-47 |
| Msa0464310 | Msa0579530 | 0.833293 | 5.795185e-56 | -8.615850e-47 |
| Msa0251120 | Msa0579530 | 0.811206 | 7.863186e-51 | -8.615850e-47 |
| Msa0252930 | Msa0579530 | 0.815322 | 9.810100e-52 | -8.615850e-47 |
| Msa0259110 | Msa0579530 | 0.805315 | 1.416443e-49 | -8.615850e-47 |
| Msa0259300 | Msa0579530 | 0.814317 | 1.638881e-51 | -8.615850e-47 |
| Msa0264760 | Msa0579530 | 0.805615 | 1.225623e-49 | -8.615850e-47 |
| Msa0269720 | Msa0579530 | 0.807686 | 4.478172e-50 | -8.615850e-47 |
| Msa0274250 | Msa0579530 | 0.811492 | 6.813178e-51 | -8.615850e-47 |
| Msa0274260 | Msa0579530 | 0.810481 | 1.128478e-50 | -8.615850e-47 |
| Msa0278460 | Msa0579530 | 0.801738 | 7.813374e-49 | -8.615850e-47 |
| Msa0278480 | Msa0579530 | 0.810037 | 1.406737e-50 | -8.615850e-47 |
| Msa0278950 | Msa0579530 | 0.804563 | 2.034533e-49 | -8.615850e-47 |
| Msa0281190 | Msa0579530 | 0.808319 | 3.284245e-50 | -8.615850e-47 |
| Msa0287720 | Msa0579530 | 0.808378 | 3.190196e-50 | -8.615850e-47 |
| Msa0298270 | Msa0579530 | 0.803205 | 3.895085e-49 | -8.615850e-47 |
| Msa0328090 | Msa0579530 | 0.803915 | 2.775852e-49 | -8.615850e-47 |
| Msa0342130 | Msa0579530 | 0.803473 | 3.428449e-49 | -8.615850e-47 |
| Msa0343720 | Msa0579530 | 0.862174 | 6.110233e-64 | -8.615850e-47 |
| Msa0491770 | Msa0579530 | 0.810627 | 1.049221e-50 | -8.615850e-47 |
| Msa0491830 | Msa0579530 | 0.836024 | 1.192251e-56 | -8.615850e-47 |
| Msa0535570 | Msa0579530 | 0.868195 | 7.818376e-66 | -8.615850e-47 |
| Msa0538440 | Msa0579530 | 0.800924 | 1.147279e-48 | -8.615850e-47 |
| Msa0538450 | Msa0579530 | 0.805479 | 1.308914e-49 | -8.615850e-47 |
| Msa0538520 | Msa0579530 | 0.802837 | 4.642343e-49 | -8.615850e-47 |
| Msa0543740 | Msa0579530 | 0.819670 | 1.027976e-52 | -8.615850e-47 |
| Msa0549170 | Msa0579530 | 0.818496 | 1.901377e-52 | -8.615850e-47 |
| Msa0549920 | Msa0579530 | 0.819054 | 1.420127e-52 | -8.615850e-47 |
| Msa0549930 | Msa0579530 | 0.805456 | 1.323222e-49 | -8.615850e-47 |
| Msa0554660 | Msa0579530 | 0.832256 | 1.048562e-55 | -8.615850e-47 |
| Msa0555920 | Msa0579530 | 0.801316 | 9.537423e-49 | -8.615850e-47 |
| Msa0579530 | Msa0589740 | 0.804141 | 2.490457e-49 | -8.615850e-47 |
| Msa0579530 | Msa0591490 | 0.853607 | 2.136286e-61 | -8.615850e-47 |
| Msa0579530 | Msa0594630 | 0.806619 | 7.531583e-50 | -8.615850e-47 |
| Msa0579530 | Msa0599600 | 0.830708 | 2.522844e-55 | -8.615850e-47 |
| Msa0579530 | Msa0604200 | 0.825168 | 5.431630e-54 | -8.615850e-47 |
| Msa0579530 | Msa0605400 | 0.808542 | 2.943354e-50 | -8.615850e-47 |
| Msa0579530 | Msa0605470 | 0.842012 | 3.352824e-58 | -8.615850e-47 |
| Msa0579530 | Msa0631700 | 0.848956 | 4.402827e-60 | -8.615850e-47 |
| Msa0579530 | Msa0634290 | 0.801411 | 9.118534e-49 | -8.615850e-47 |
| Msa0579530 | Msa0639410 | 0.809935 | 1.479203e-50 | -8.615850e-47 |
| Msa0579530 | Msa0640290 | 0.809996 | 1.435179e-50 | -8.615850e-47 |
| Msa0579530 | Msa0643840 | 0.886628 | 2.897505e-72 | -8.615850e-47 |
| Msa0579530 | Msa0645150 | 0.836052 | 1.173240e-56 | -8.615850e-47 |
| Msa0579530 | Msa0645370 | 0.804043 | 2.610476e-49 | -8.615850e-47 |
| Msa0579530 | Msa0650310 | 0.802873 | 4.561905e-49 | -8.615850e-47 |
| Msa0579530 | Msa0668220 | 0.813112 | 3.018517e-51 | -8.615850e-47 |
| Msa0579530 | Msa0670360 | 0.865501 | 5.643396e-65 | -8.615850e-47 |
| Msa0579530 | Msa0671490 | 0.816213 | 6.209462e-52 | -8.615850e-47 |
| Msa0579530 | Msa0671640 | 0.822606 | 2.164557e-53 | -8.615850e-47 |
| Msa0579530 | Msa0678620 | 0.848184 | 7.206572e-60 | -8.615850e-47 |
| Msa0579530 | Msa0683690 | 0.809379 | 1.948475e-50 | -8.615850e-47 |
| Msa0579530 | Msa0685080 | 0.801167 | 1.022866e-48 | -8.615850e-47 |
| Msa0579530 | Msa0711240 | 0.802577 | 5.251547e-49 | -8.615850e-47 |
| Msa0579530 | Msa0711250 | 0.809332 | 1.993810e-50 | -8.615850e-47 |
| Msa0579530 | Msa0727480 | 0.870500 | 1.392846e-66 | -8.615850e-47 |
| Msa0579530 | Msa0735130 | 0.842931 | 1.912533e-58 | -8.615850e-47 |
| Msa0579530 | Msa0735140 | 0.801539 | 8.586617e-49 | -8.615850e-47 |
| Msa0579530 | Msa0735280 | 0.826321 | 2.892413e-54 | -8.615850e-47 |
| Msa0579530 | Msa0751960 | 0.809243 | 2.083240e-50 | -8.615850e-47 |
| Msa0579530 | Msa0768670 | 0.877427 | 6.338153e-69 | -8.615850e-47 |
| Msa0579530 | Msa0768720 | 0.877487 | 6.042770e-69 | -8.615850e-47 |
| Msa0579530 | Msa0777060 | 0.848998 | 4.286272e-60 | -8.615850e-47 |
| Msa0579530 | Msa0777070 | 0.821307 | 4.327814e-53 | -8.615850e-47 |
| Msa0579530 | Msa0777250 | 0.819408 | 1.180099e-52 | -8.615850e-47 |
| Msa0579530 | Msa0787860 | 0.826768 | 2.263175e-54 | -8.615850e-47 |
| Msa0579530 | Msa0792330 | 0.816905 | 4.345381e-52 | -8.615850e-47 |
| Msa0579530 | Msa0806930 | 0.804919 | 1.714345e-49 | -8.615850e-47 |
| Msa0579530 | Msa0814160 | 0.880523 | 5.117097e-70 | -8.615850e-47 |
| Msa0579530 | Msa0814230 | 0.806514 | 7.927774e-50 | -8.615850e-47 |
| Msa0579530 | Msa0816140 | 0.817109 | 3.910840e-52 | -8.615850e-47 |
| Msa0579530 | Msa0824850 | 0.822119 | 2.808806e-53 | -8.615850e-47 |
| Msa0579530 | Msa0824860 | 0.829247 | 5.726967e-55 | -8.615850e-47 |
| Msa0579530 | Msa0854840 | 0.856861 | 2.416191e-62 | -8.615850e-47 |
| Msa0579530 | Msa0861730 | 0.814211 | 1.729259e-51 | -8.615850e-47 |
| Msa0579530 | Msa0863840 | 0.836156 | 1.103693e-56 | -8.615850e-47 |
| Msa0579530 | Msa0863850 | 0.827711 | 1.345416e-54 | -8.615850e-47 |
| Msa0579530 | Msa0863860 | 0.817541 | 3.126580e-52 | -8.615850e-47 |
| Msa0579530 | Msa0864160 | 0.833411 | 5.415414e-56 | -8.615850e-47 |
| Msa0579530 | Msa0868820 | 0.817639 | 2.970994e-52 | -8.615850e-47 |
| Msa0579530 | Msa0883640 | 0.842067 | 3.241815e-58 | -8.615850e-47 |
| Msa0579530 | Msa0893840 | 0.820617 | 6.240378e-53 | -8.615850e-47 |
| Msa0579530 | Msa0896920 | 0.828640 | 8.033268e-55 | -8.615850e-47 |
| Msa0579530 | Msa0902340 | 0.835236 | 1.887096e-56 | -8.615850e-47 |
| Msa0579530 | Msa0910830 | 0.852249 | 5.226636e-61 | -8.615850e-47 |
| Msa0579530 | Msa0913550 | 0.813968 | 1.956993e-51 | -8.615850e-47 |
| Msa0579530 | Msa0932890 | 0.802409 | 5.689073e-49 | -8.615850e-47 |
| Msa0579530 | Msa0933590 | 0.803862 | 2.846827e-49 | -8.615850e-47 |
| Msa0579530 | Msa0941120 | 0.822823 | 1.927177e-53 | -8.615850e-47 |
| Msa0579530 | Msa0951150 | 0.833959 | 3.952174e-56 | -8.615850e-47 |
| Msa0579530 | Msa0960090 | 0.841994 | 3.389247e-58 | -8.615850e-47 |
| Msa0579530 | Msa0985700 | 0.843938 | 1.029851e-58 | -8.615850e-47 |
| Msa0579530 | Msa0987640 | 0.821719 | 3.476590e-53 | -8.615850e-47 |
| Msa0579530 | Msa0993450 | 0.832114 | 1.137021e-55 | -8.615850e-47 |
| Msa0579530 | Msa1003110 | 0.827490 | 1.520215e-54 | -8.615850e-47 |
| Msa0579530 | Msa1006170 | 0.845451 | 4.029316e-59 | -8.615850e-47 |
| Msa0579530 | Msa1020540 | 0.811536 | 6.667589e-51 | -8.615850e-47 |
| Msa0579530 | Msa1021620 | 0.870412 | 1.487695e-66 | -8.615850e-47 |
| Msa0579530 | Msa1022490 | 0.803355 | 3.627311e-49 | -8.615850e-47 |
| Msa0579530 | Msa1022510 | 0.812709 | 3.699426e-51 | -8.615850e-47 |
| Msa0579530 | Msa1024350 | 0.825594 | 4.304959e-54 | -8.615850e-47 |
| Msa0579530 | Msa1026050 | 0.842346 | 2.735573e-58 | -8.615850e-47 |
| Msa0579530 | Msa1046210 | 0.833759 | 4.435228e-56 | -8.615850e-47 |
| Msa0579530 | Msa1048350 | 0.824384 | 8.309198e-54 | -8.615850e-47 |
| Msa0579530 | Msa1060320 | 0.836569 | 8.665617e-57 | -8.615850e-47 |
| Msa0579530 | Msa1061670 | 0.870943 | 9.958714e-67 | -8.615850e-47 |
| Msa0579530 | Msa1064940 | 0.819756 | 9.824735e-53 | -8.615850e-47 |
| Msa0579530 | Msa1068080 | 0.801240 | 9.885464e-49 | -8.615850e-47 |
| Msa0579530 | Msa1073680 | 0.803477 | 3.422233e-49 | -8.615850e-47 |
| Msa0579530 | Msa1075030 | 0.800515 | 1.389759e-48 | -8.615850e-47 |
| Msa0579530 | Msa1076830 | 0.815043 | 1.131593e-51 | -8.615850e-47 |
| Msa0579530 | Msa1081610 | 0.812161 | 4.872323e-51 | -8.615850e-47 |
| Msa0579530 | Msa1084800 | 0.801751 | 7.768086e-49 | -8.615850e-47 |
| Msa0579530 | Msa1087370 | 0.806984 | 6.306302e-50 | -8.615850e-47 |
| Msa0579530 | Msa1087380 | 0.819158 | 1.345266e-52 | -8.615850e-47 |
| Msa0579530 | Msa1091000 | 0.819545 | 1.098016e-52 | -8.615850e-47 |
| Msa0579530 | Msa1100030 | 0.823953 | 1.049160e-53 | -8.615850e-47 |
| Msa0579530 | Msa1104960 | 0.837483 | 5.063119e-57 | -8.615850e-47 |
| Msa0579530 | Msa1106680 | 0.824136 | 9.505637e-54 | -8.615850e-47 |
| Msa0579530 | Msa1106960 | 0.860643 | 1.790191e-63 | -8.615850e-47 |
| Msa0579530 | Msa1109540 | 0.801654 | 8.129838e-49 | -8.615850e-47 |
| Msa0579530 | Msa1109880 | 0.844759 | 6.197726e-59 | -8.615850e-47 |
| Msa0579530 | Msa1109890 | 0.852402 | 4.728075e-61 | -8.615850e-47 |
| Msa0579530 | Msa1119670 | 0.800750 | 1.244830e-48 | -8.615850e-47 |
| Msa0579530 | Msa1120680 | 0.819819 | 9.508566e-53 | -8.615850e-47 |
| Msa0579530 | Msa1133860 | 0.820801 | 5.660714e-53 | -8.615850e-47 |
| Msa0579530 | Msa1138110 | 0.801493 | 8.775223e-49 | -8.615850e-47 |
| Msa0579530 | Msa1139020 | 0.800241 | 1.580284e-48 | -8.615850e-47 |
| Msa0579530 | Msa1147030 | 0.824230 | 9.032808e-54 | -8.615850e-47 |
| Msa0579530 | Msa1149020 | 0.856048 | 4.185537e-62 | -8.615850e-47 |
| Msa0579530 | Msa1152180 | 0.859419 | 4.192197e-63 | -8.615850e-47 |
| Msa0579530 | Msa1156240 | 0.817201 | 3.727854e-52 | -8.615850e-47 |
| Msa0579530 | Msa1163670 | 0.800691 | 1.279908e-48 | -8.615850e-47 |
| Msa0579530 | Msa1170320 | 0.806639 | 7.461191e-50 | -8.615850e-47 |
| Msa0579530 | Msa1170340 | 0.815883 | 7.357716e-52 | -8.615850e-47 |
| Msa0579530 | Msa1214960 | 0.810527 | 1.102846e-50 | -8.615850e-47 |
| Msa0579530 | Msa1225510 | 0.813057 | 3.102940e-51 | -8.615850e-47 |
| Msa0579530 | Msa1233630 | 0.801371 | 9.293539e-49 | -8.615850e-47 |
| Msa0579530 | Msa1269050 | 0.810970 | 8.845448e-51 | -8.615850e-47 |
| Msa0579530 | Msa1279750 | 0.803785 | 2.953459e-49 | -8.615850e-47 |
| Msa0579530 | Msa1282150 | 0.843665 | 1.218639e-58 | -8.615850e-47 |
| Msa0579530 | Msa1286420 | 0.855034 | 8.267809e-62 | -8.615850e-47 |
| Msa0579530 | Msa1296870 | 0.803457 | 3.453726e-49 | -8.615850e-47 |
| Msa0579530 | Msa1300610 | 0.819108 | 1.380972e-52 | -8.615850e-47 |
| Msa0579530 | Msa1319290 | 0.806839 | 6.769581e-50 | -8.615850e-47 |
| Msa0579530 | Msa1321250 | 0.810661 | 1.031421e-50 | -8.615850e-47 |
| Msa0579530 | Msa1323030 | 0.820447 | 6.828271e-53 | -8.615850e-47 |
| Msa0579530 | Msa1323120 | 0.860242 | 2.367657e-63 | -8.615850e-47 |
| Msa0579530 | Msa1329740 | 0.820845 | 5.530441e-53 | -8.615850e-47 |
| Msa0579530 | Msa1341030 | 0.804685 | 1.918352e-49 | -8.615850e-47 |
| Msa0579530 | Msa1350870 | 0.807277 | 5.467410e-50 | -8.615850e-47 |
| Msa0579530 | Msa1355330 | 0.807615 | 4.635367e-50 | -8.615850e-47 |
| Msa0579530 | Msa1355340 | 0.840807 | 6.960854e-58 | -8.615850e-47 |
| Msa0579530 | Msa1357840 | 0.809507 | 1.828899e-50 | -8.615850e-47 |
| Msa0579530 | Msa1357860 | 0.820523 | 6.557984e-53 | -8.615850e-47 |
| Msa0579530 | Msa1373560 | 0.816537 | 5.254813e-52 | -8.615850e-47 |
| Msa0579530 | Msa1376070 | 0.824054 | 9.934866e-54 | -8.615850e-47 |
| Msa0579530 | Msa1377460 | 0.802232 | 6.186552e-49 | -8.615850e-47 |
| Msa0579530 | Msa1377520 | 0.850011 | 2.237038e-60 | -8.615850e-47 |
| Msa0579530 | Msa1395150 | 0.820601 | 6.293554e-53 | -8.615850e-47 |
| Msa0579530 | Msa1406840 | 0.807856 | 4.120147e-50 | -8.615850e-47 |
| Msa0579530 | Msa1407670 | 0.826713 | 2.332575e-54 | -8.615850e-47 |
| Msa0579530 | Msa1411550 | 0.829591 | 4.725398e-55 | -8.615850e-47 |
| Msa0579530 | Msa1420020 | 0.803903 | 2.792003e-49 | -8.615850e-47 |
| Msa0579530 | Msa1421130 | 0.808321 | 3.280310e-50 | -8.615850e-47 |
| Msa0579530 | Msa1445900 | 0.815888 | 7.337959e-52 | -8.615850e-47 |
| Msa0579530 | Msa1449770 | 0.828784 | 7.417628e-55 | -8.615850e-47 |
| Msa0579530 | Msa1456600 | 0.842684 | 2.225103e-58 | -8.615850e-47 |
| Msa0579530 | Msa1459610 | 0.844301 | 8.229472e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579530 | MtrunA17_Chr4g0042791 | 65.251 | 259 | 84 | 3 | 1 | 255 | 1 | 257 | 2.17e-102 | 300 |
| Msa0579530 | MtrunA17_Chr4g0042781 | 69.314 | 277 | 75 | 4 | 1 | 267 | 1 | 277 | 2.59e-98 | 290 |
| Msa0579530 | MtrunA17_Chr4g0042801 | 55.474 | 274 | 101 | 4 | 1 | 271 | 1 | 256 | 4.36e-87 | 260 |
| Msa0579530 | MtrunA17_Chr4g0042811 | 33.134 | 335 | 144 | 13 | 2 | 269 | 9 | 330 | 8.84e-32 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579530 | AT3G11810.1 | 35.866 | 329 | 150 | 10 | 4 | 272 | 14 | 341 | 5.39e-43 | 150 |
| Msa0579530 | AT2G03330.1 | 34.896 | 192 | 89 | 8 | 117 | 272 | 187 | 378 | 4.99e-11 | 62.8 |
Find 85 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGTTGCAGAGGTGGAATT+TGG | 0.178948 | 4_1:-84279770 | Msa0579530:CDS |
| CAACTAACCCTTACTTAGTT+AGG | 0.274441 | 4_1:-84280099 | Msa0579530:CDS |
| CTACAATATTGTGGTTTATA+CGG | 0.275584 | 4_1:-84279816 | Msa0579530:CDS |
| CTAGATAAATAATGAGAAAA+AGG | 0.286783 | 4_1:+84280137 | None:intergenic |
| TGGAAGAGATAAGGAGGAAG+AGG | 0.333344 | 4_1:+84280350 | None:intergenic |
| AAGTTGCAGAGGTGGAATTT+GGG | 0.339225 | 4_1:-84279769 | Msa0579530:CDS |
| TTTGTCTTCGGAATTCTCAT+TGG | 0.342651 | 4_1:-84280166 | Msa0579530:CDS |
| TGGTGATTGTAGGGGATTGT+TGG | 0.354887 | 4_1:+84280392 | None:intergenic |
| TTGTCTTCGGAATTCTCATT+GGG | 0.379143 | 4_1:-84280165 | Msa0579530:CDS |
| ATGGATATTGGTATGGATAA+GGG | 0.388163 | 4_1:-84279894 | Msa0579530:CDS |
| AGAGGAAAGAGAGGGGAAGG+AGG | 0.392894 | 4_1:+84280443 | None:intergenic |
| AAAACCAACCTAACTAAGTA+AGG | 0.401657 | 4_1:+84280091 | None:intergenic |
| TGGGTTCTTGCAATGGATAT+TGG | 0.409158 | 4_1:-84279906 | Msa0579530:CDS |
| AATGGATATTGGTATGGATA+AGG | 0.414560 | 4_1:-84279895 | Msa0579530:CDS |
| ATCTCTTCCATCTTCACCTC+TGG | 0.416201 | 4_1:-84280337 | Msa0579530:CDS |
| GAGGGGAAGGAGGAAGATGA+GGG | 0.421686 | 4_1:+84280453 | None:intergenic |
| TGTCGTGGTGGAATCATGTT+GGG | 0.421755 | 4_1:-84280005 | Msa0579530:CDS |
| AGAGGGGAAGGAGGAAGATG+AGG | 0.428016 | 4_1:+84280452 | None:intergenic |
| ACTTGTTTGGGTTCTTGCAA+TGG | 0.439056 | 4_1:-84279913 | Msa0579530:CDS |
| ACGGTGGAGGTGGCAAGGAG+GGG | 0.443237 | 4_1:+84280217 | None:intergenic |
| CGGTGGAGGTGGCAAGGAGG+GGG | 0.445031 | 4_1:+84280218 | None:intergenic |
| GGAAGATGAGGGAGAGAGTG+AGG | 0.459665 | 4_1:+84280464 | None:intergenic |
| ATGATTGTGGTGGTGATTGT+AGG | 0.464518 | 4_1:+84280382 | None:intergenic |
| AGATGAGGGAGAGGAAAGAG+AGG | 0.468808 | 4_1:+84280434 | None:intergenic |
| GGGAGAGGAAAGAGAGGGGA+AGG | 0.471420 | 4_1:+84280440 | None:intergenic |
| AACGGTGGAGGTGGCAAGGA+GGG | 0.477673 | 4_1:+84280216 | None:intergenic |
| ATTGCTTCATTGAGTTTGAC+AGG | 0.480947 | 4_1:+84280265 | None:intergenic |
| TTTATCAGTTAACTTGAGCT+TGG | 0.481284 | 4_1:-84280038 | Msa0579530:CDS |
| GGGGAAGAAAGAAGTGGAGA+TGG | 0.481542 | 4_1:+84280237 | None:intergenic |
| TATGGATAAGGGGTTACACT+TGG | 0.486751 | 4_1:-84279883 | Msa0579530:CDS |
| TCTTGCAATGGATATTGGTA+TGG | 0.491414 | 4_1:-84279901 | Msa0579530:CDS |
| TGTGTTGGAAGATGAGGGAG+AGG | 0.491831 | 4_1:+84280425 | None:intergenic |
| TGATTGTGGTGGTGATTGTA+GGG | 0.498995 | 4_1:+84280383 | None:intergenic |
| GGTCAAAGGAATGAAAAGGT+TGG | 0.502939 | 4_1:-84279951 | Msa0579530:CDS |
| CGTGGTTTCTCCTATACTTG+TGG | 0.506790 | 4_1:-84279849 | Msa0579530:CDS |
| TAACGGTGGAGGTGGCAAGG+AGG | 0.510197 | 4_1:+84280215 | None:intergenic |
| GATGGCGCCAGAGGTGAAGA+TGG | 0.517180 | 4_1:+84280330 | None:intergenic |
| GACAAATGTAACGGTGGAGG+TGG | 0.517851 | 4_1:+84280207 | None:intergenic |
| AGCAAAAGCACCACAAGTAT+AGG | 0.520518 | 4_1:+84279839 | None:intergenic |
| GGAAGAGATAAGGAGGAAGA+GGG | 0.520844 | 4_1:+84280351 | None:intergenic |
| TGAAGATGGAAGAGATAAGG+AGG | 0.522478 | 4_1:+84280344 | None:intergenic |
| TTGAACCGCTGAGGAGAAGT+TGG | 0.523710 | 4_1:-84279979 | Msa0579530:CDS |
| TTTGACAGGTCGATTAAAGA+AGG | 0.524179 | 4_1:+84280279 | None:intergenic |
| TAACCCTTACTTAGTTAGGT+TGG | 0.529537 | 4_1:-84280095 | Msa0579530:CDS |
| CAAGGAGAAAGTTGCAGAGG+TGG | 0.530274 | 4_1:-84279777 | Msa0579530:CDS |
| AGGTGAAGATGGAAGAGATA+AGG | 0.536294 | 4_1:+84280341 | None:intergenic |
| AGTTGGTCAAAGGAATGAAA+AGG | 0.541999 | 4_1:-84279955 | Msa0579530:CDS |
| GGTGGAATTTGGGAAGGAAA+AGG | 0.542073 | 4_1:-84279759 | Msa0579530:CDS |
| GATGAGGGAGAGGAAAGAGA+GGG | 0.546733 | 4_1:+84280435 | None:intergenic |
| GTTGGTGTTTGAGAATGTGT+TGG | 0.552419 | 4_1:+84280410 | None:intergenic |
| TGCAGAGGTGGAATTTGGGA+AGG | 0.553482 | 4_1:-84279765 | Msa0579530:CDS |
| TTGTCGTGGTGGAATCATGT+TGG | 0.556408 | 4_1:-84280006 | Msa0579530:CDS |
| ATGAGGGAGAGGAAAGAGAG+GGG | 0.558820 | 4_1:+84280436 | None:intergenic |
| GATGGGAAGATACACTTACT+TGG | 0.559072 | 4_1:-84279737 | Msa0579530:CDS |
| TGGATATTGGTATGGATAAG+GGG | 0.559865 | 4_1:-84279893 | Msa0579530:CDS |
| GCTGTAGGTGATGGTGATGA+TGG | 0.562941 | 4_1:+84280312 | None:intergenic |
| GAATTTGGGAAGGAAAAGGA+TGG | 0.566311 | 4_1:-84279755 | Msa0579530:CDS |
| AGAAGTTGGAAGTTGGTCAA+AGG | 0.576899 | 4_1:-84279965 | Msa0579530:CDS |
| ATGTAACGGTGGAGGTGGCA+AGG | 0.577775 | 4_1:+84280212 | None:intergenic |
| GCTGAGGAGAAGTTGGAAGT+TGG | 0.580905 | 4_1:-84279972 | Msa0579530:CDS |
| TGAGAATGTGTTGGAAGATG+AGG | 0.582596 | 4_1:+84280419 | None:intergenic |
| ATGGATAAGGGGTTACACTT+GGG | 0.583023 | 4_1:-84279882 | Msa0579530:CDS |
| GAGAATGTGTTGGAAGATGA+GGG | 0.589462 | 4_1:+84280420 | None:intergenic |
| GAGAGAGTGAGGAAGTGACG+AGG | 0.591942 | 4_1:+84280475 | None:intergenic |
| GAGGGACAAGAAGATGATTG+TGG | 0.595225 | 4_1:+84280369 | None:intergenic |
| GGGAAGATACACTTACTTGG+TGG | 0.614475 | 4_1:-84279734 | Msa0579530:CDS |
| CTGATAAATATGTCCCAAGA+GGG | 0.614736 | 4_1:+84280053 | None:intergenic |
| GTGGTAGACGCTGTAGGTGA+TGG | 0.634689 | 4_1:+84280303 | None:intergenic |
| GTCGTGGTGGAATCATGTTG+GGG | 0.636254 | 4_1:-84280004 | Msa0579530:CDS |
| AAACCAACCTAACTAAGTAA+GGG | 0.636718 | 4_1:+84280092 | None:intergenic |
| GAAGGCGTGGTAGACGCTGT+AGG | 0.640072 | 4_1:+84280297 | None:intergenic |
| CTGCAAGGAGAAAGTTGCAG+AGG | 0.649629 | 4_1:-84279780 | Msa0579530:CDS |
| CAGGTCGATTAAAGAAGGCG+TGG | 0.657810 | 4_1:+84280284 | None:intergenic |
| AACTTCCAACTTCTCCTCAG+CGG | 0.659788 | 4_1:+84279974 | None:intergenic |
| GATTGTGGTGGTGATTGTAG+GGG | 0.665093 | 4_1:+84280384 | None:intergenic |
| GATGGTGATGATGGCGCCAG+AGG | 0.667466 | 4_1:+84280321 | None:intergenic |
| GGTGAATGTGATTGTCGTGG+TGG | 0.669965 | 4_1:-84280017 | Msa0579530:CDS |
| ACTGATAAATATGTCCCAAG+AGG | 0.675246 | 4_1:+84280052 | None:intergenic |
| AATTTGGGAAGGAAAAGGAT+GGG | 0.685829 | 4_1:-84279754 | Msa0579530:CDS |
| CTTGGTGAATGTGATTGTCG+TGG | 0.686499 | 4_1:-84280020 | Msa0579530:CDS |
| GGTTCTGTACATATACTGCA+AGG | 0.688064 | 4_1:-84279795 | Msa0579530:CDS |
| GATGACAAATGTAACGGTGG+AGG | 0.693238 | 4_1:+84280204 | None:intergenic |
| GAATGAGATGACAAATGTAA+CGG | 0.701065 | 4_1:+84280198 | None:intergenic |
| TGAGATGACAAATGTAACGG+TGG | 0.702341 | 4_1:+84280201 | None:intergenic |
| GGACAAGAAGATGATTGTGG+TGG | 0.737297 | 4_1:+84280372 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTCATATTTTTTGTCTT+CGG | - | chr4_1:84280072-84280091 | Msa0579530:CDS | 20.0% |
| !! | CTAGATAAATAATGAGAAAA+AGG | + | chr4_1:84280116-84280135 | None:intergenic | 20.0% |
| !!! | CTTTTTCTCATTATTTATCT+AGG | - | chr4_1:84280114-84280133 | Msa0579530:CDS | 20.0% |
| !!! | TTCTTCATATTTTTTGTCTT+CGG | - | chr4_1:84280072-84280091 | Msa0579530:CDS | 20.0% |
| !! | CTAGATAAATAATGAGAAAA+AGG | + | chr4_1:84280116-84280135 | None:intergenic | 20.0% |
| !!! | CTTTTTCTCATTATTTATCT+AGG | - | chr4_1:84280114-84280133 | Msa0579530:CDS | 20.0% |
| !! | TTGTCTTTCTTTTACTTGTT+TGG | - | chr4_1:84280324-84280343 | Msa0579530:CDS | 25.0% |
| !! | TGTCTTTCTTTTACTTGTTT+GGG | - | chr4_1:84280325-84280344 | Msa0579530:CDS | 25.0% |
| ! | CTACAATATTGTGGTTTATA+CGG | - | chr4_1:84280434-84280453 | Msa0579530:CDS | 25.0% |
| !! | TTGTCTTTCTTTTACTTGTT+TGG | - | chr4_1:84280324-84280343 | Msa0579530:CDS | 25.0% |
| !! | TGTCTTTCTTTTACTTGTTT+GGG | - | chr4_1:84280325-84280344 | Msa0579530:CDS | 25.0% |
| ! | CTACAATATTGTGGTTTATA+CGG | - | chr4_1:84280434-84280453 | Msa0579530:CDS | 25.0% |
| GAATGAGATGACAAATGTAA+CGG | + | chr4_1:84280055-84280074 | None:intergenic | 30.0% | |
| AAACCAACCTAACTAAGTAA+GGG | + | chr4_1:84280161-84280180 | None:intergenic | 30.0% | |
| AAAACCAACCTAACTAAGTA+AGG | + | chr4_1:84280162-84280181 | None:intergenic | 30.0% | |
| ! | TTTATCAGTTAACTTGAGCT+TGG | - | chr4_1:84280212-84280231 | Msa0579530:CDS | 30.0% |
| AATGGATATTGGTATGGATA+AGG | - | chr4_1:84280355-84280374 | Msa0579530:CDS | 30.0% | |
| ATGGATATTGGTATGGATAA+GGG | - | chr4_1:84280356-84280375 | Msa0579530:CDS | 30.0% | |
| GAATGAGATGACAAATGTAA+CGG | + | chr4_1:84280055-84280074 | None:intergenic | 30.0% | |
| AAACCAACCTAACTAAGTAA+GGG | + | chr4_1:84280161-84280180 | None:intergenic | 30.0% | |
| AAAACCAACCTAACTAAGTA+AGG | + | chr4_1:84280162-84280181 | None:intergenic | 30.0% | |
| ! | TTTATCAGTTAACTTGAGCT+TGG | - | chr4_1:84280212-84280231 | Msa0579530:CDS | 30.0% |
| AATGGATATTGGTATGGATA+AGG | - | chr4_1:84280355-84280374 | Msa0579530:CDS | 30.0% | |
| ATGGATATTGGTATGGATAA+GGG | - | chr4_1:84280356-84280375 | Msa0579530:CDS | 30.0% | |
| TTTGACAGGTCGATTAAAGA+AGG | + | chr4_1:84279974-84279993 | None:intergenic | 35.0% | |
| ATTGCTTCATTGAGTTTGAC+AGG | + | chr4_1:84279988-84280007 | None:intergenic | 35.0% | |
| TTTGTCTTCGGAATTCTCAT+TGG | - | chr4_1:84280084-84280103 | Msa0579530:CDS | 35.0% | |
| TTGTCTTCGGAATTCTCATT+GGG | - | chr4_1:84280085-84280104 | Msa0579530:CDS | 35.0% | |
| CAACTAACCCTTACTTAGTT+AGG | - | chr4_1:84280151-84280170 | Msa0579530:CDS | 35.0% | |
| TAACCCTTACTTAGTTAGGT+TGG | - | chr4_1:84280155-84280174 | Msa0579530:CDS | 35.0% | |
| !! | ATGATTGTTTTACTCCCTCT+TGG | - | chr4_1:84280183-84280202 | Msa0579530:CDS | 35.0% |
| !! | TGATTGTTTTACTCCCTCTT+GGG | - | chr4_1:84280184-84280203 | Msa0579530:CDS | 35.0% |
| CTGATAAATATGTCCCAAGA+GGG | + | chr4_1:84280200-84280219 | None:intergenic | 35.0% | |
| ACTGATAAATATGTCCCAAG+AGG | + | chr4_1:84280201-84280220 | None:intergenic | 35.0% | |
| AGTTGGTCAAAGGAATGAAA+AGG | - | chr4_1:84280295-84280314 | Msa0579530:CDS | 35.0% | |
| TCTTGCAATGGATATTGGTA+TGG | - | chr4_1:84280349-84280368 | Msa0579530:CDS | 35.0% | |
| TGGATATTGGTATGGATAAG+GGG | - | chr4_1:84280357-84280376 | Msa0579530:CDS | 35.0% | |
| ! | GCTTTTGCTCTACAATATTG+TGG | - | chr4_1:84280425-84280444 | Msa0579530:CDS | 35.0% |
| AATTTGGGAAGGAAAAGGAT+GGG | - | chr4_1:84280496-84280515 | Msa0579530:CDS | 35.0% | |
| TTTGACAGGTCGATTAAAGA+AGG | + | chr4_1:84279974-84279993 | None:intergenic | 35.0% | |
| ATTGCTTCATTGAGTTTGAC+AGG | + | chr4_1:84279988-84280007 | None:intergenic | 35.0% | |
| TTTGTCTTCGGAATTCTCAT+TGG | - | chr4_1:84280084-84280103 | Msa0579530:CDS | 35.0% | |
| TTGTCTTCGGAATTCTCATT+GGG | - | chr4_1:84280085-84280104 | Msa0579530:CDS | 35.0% | |
| CAACTAACCCTTACTTAGTT+AGG | - | chr4_1:84280151-84280170 | Msa0579530:CDS | 35.0% | |
| TAACCCTTACTTAGTTAGGT+TGG | - | chr4_1:84280155-84280174 | Msa0579530:CDS | 35.0% | |
| !! | ATGATTGTTTTACTCCCTCT+TGG | - | chr4_1:84280183-84280202 | Msa0579530:CDS | 35.0% |
| !! | TGATTGTTTTACTCCCTCTT+GGG | - | chr4_1:84280184-84280203 | Msa0579530:CDS | 35.0% |
| CTGATAAATATGTCCCAAGA+GGG | + | chr4_1:84280200-84280219 | None:intergenic | 35.0% | |
| ACTGATAAATATGTCCCAAG+AGG | + | chr4_1:84280201-84280220 | None:intergenic | 35.0% | |
| AGTTGGTCAAAGGAATGAAA+AGG | - | chr4_1:84280295-84280314 | Msa0579530:CDS | 35.0% | |
| TCTTGCAATGGATATTGGTA+TGG | - | chr4_1:84280349-84280368 | Msa0579530:CDS | 35.0% | |
| TGGATATTGGTATGGATAAG+GGG | - | chr4_1:84280357-84280376 | Msa0579530:CDS | 35.0% | |
| ! | GCTTTTGCTCTACAATATTG+TGG | - | chr4_1:84280425-84280444 | Msa0579530:CDS | 35.0% |
| AATTTGGGAAGGAAAAGGAT+GGG | - | chr4_1:84280496-84280515 | Msa0579530:CDS | 35.0% | |
| GAGAATGTGTTGGAAGATGA+GGG | + | chr4_1:84279833-84279852 | None:intergenic | 40.0% | |
| TGAGAATGTGTTGGAAGATG+AGG | + | chr4_1:84279834-84279853 | None:intergenic | 40.0% | |
| ! | GTTGGTGTTTGAGAATGTGT+TGG | + | chr4_1:84279843-84279862 | None:intergenic | 40.0% |
| ! | TGATTGTGGTGGTGATTGTA+GGG | + | chr4_1:84279870-84279889 | None:intergenic | 40.0% |
| ! | ATGATTGTGGTGGTGATTGT+AGG | + | chr4_1:84279871-84279890 | None:intergenic | 40.0% |
| TGAAGATGGAAGAGATAAGG+AGG | + | chr4_1:84279909-84279928 | None:intergenic | 40.0% | |
| AGGTGAAGATGGAAGAGATA+AGG | + | chr4_1:84279912-84279931 | None:intergenic | 40.0% | |
| TGAGATGACAAATGTAACGG+TGG | + | chr4_1:84280052-84280071 | None:intergenic | 40.0% | |
| ! | AGAAGTTGGAAGTTGGTCAA+AGG | - | chr4_1:84280285-84280304 | Msa0579530:CDS | 40.0% |
| GGTCAAAGGAATGAAAAGGT+TGG | - | chr4_1:84280299-84280318 | Msa0579530:CDS | 40.0% | |
| ! | ACTTGTTTGGGTTCTTGCAA+TGG | - | chr4_1:84280337-84280356 | Msa0579530:CDS | 40.0% |
| TGGGTTCTTGCAATGGATAT+TGG | - | chr4_1:84280344-84280363 | Msa0579530:CDS | 40.0% | |
| TATGGATAAGGGGTTACACT+TGG | - | chr4_1:84280367-84280386 | Msa0579530:CDS | 40.0% | |
| ATGGATAAGGGGTTACACTT+GGG | - | chr4_1:84280368-84280387 | Msa0579530:CDS | 40.0% | |
| !! | AGCAAAAGCACCACAAGTAT+AGG | + | chr4_1:84280414-84280433 | None:intergenic | 40.0% |
| GGTTCTGTACATATACTGCA+AGG | - | chr4_1:84280455-84280474 | Msa0579530:CDS | 40.0% | |
| AAAGTTGCAGAGGTGGAATT+TGG | - | chr4_1:84280480-84280499 | Msa0579530:CDS | 40.0% | |
| AAGTTGCAGAGGTGGAATTT+GGG | - | chr4_1:84280481-84280500 | Msa0579530:CDS | 40.0% | |
| GAATTTGGGAAGGAAAAGGA+TGG | - | chr4_1:84280495-84280514 | Msa0579530:CDS | 40.0% | |
| GATGGGAAGATACACTTACT+TGG | - | chr4_1:84280513-84280532 | Msa0579530:CDS | 40.0% | |
| GAGAATGTGTTGGAAGATGA+GGG | + | chr4_1:84279833-84279852 | None:intergenic | 40.0% | |
| TGAGAATGTGTTGGAAGATG+AGG | + | chr4_1:84279834-84279853 | None:intergenic | 40.0% | |
| ! | GTTGGTGTTTGAGAATGTGT+TGG | + | chr4_1:84279843-84279862 | None:intergenic | 40.0% |
| ! | TGATTGTGGTGGTGATTGTA+GGG | + | chr4_1:84279870-84279889 | None:intergenic | 40.0% |
| ! | ATGATTGTGGTGGTGATTGT+AGG | + | chr4_1:84279871-84279890 | None:intergenic | 40.0% |
| TGAAGATGGAAGAGATAAGG+AGG | + | chr4_1:84279909-84279928 | None:intergenic | 40.0% | |
| AGGTGAAGATGGAAGAGATA+AGG | + | chr4_1:84279912-84279931 | None:intergenic | 40.0% | |
| TGAGATGACAAATGTAACGG+TGG | + | chr4_1:84280052-84280071 | None:intergenic | 40.0% | |
| ! | AGAAGTTGGAAGTTGGTCAA+AGG | - | chr4_1:84280285-84280304 | Msa0579530:CDS | 40.0% |
| GGTCAAAGGAATGAAAAGGT+TGG | - | chr4_1:84280299-84280318 | Msa0579530:CDS | 40.0% | |
| ! | ACTTGTTTGGGTTCTTGCAA+TGG | - | chr4_1:84280337-84280356 | Msa0579530:CDS | 40.0% |
| TGGGTTCTTGCAATGGATAT+TGG | - | chr4_1:84280344-84280363 | Msa0579530:CDS | 40.0% | |
| TATGGATAAGGGGTTACACT+TGG | - | chr4_1:84280367-84280386 | Msa0579530:CDS | 40.0% | |
| ATGGATAAGGGGTTACACTT+GGG | - | chr4_1:84280368-84280387 | Msa0579530:CDS | 40.0% | |
| !! | AGCAAAAGCACCACAAGTAT+AGG | + | chr4_1:84280414-84280433 | None:intergenic | 40.0% |
| GGTTCTGTACATATACTGCA+AGG | - | chr4_1:84280455-84280474 | Msa0579530:CDS | 40.0% | |
| AAAGTTGCAGAGGTGGAATT+TGG | - | chr4_1:84280480-84280499 | Msa0579530:CDS | 40.0% | |
| AAGTTGCAGAGGTGGAATTT+GGG | - | chr4_1:84280481-84280500 | Msa0579530:CDS | 40.0% | |
| GAATTTGGGAAGGAAAAGGA+TGG | - | chr4_1:84280495-84280514 | Msa0579530:CDS | 40.0% | |
| GATGGGAAGATACACTTACT+TGG | - | chr4_1:84280513-84280532 | Msa0579530:CDS | 40.0% | |
| TGGTGATTGTAGGGGATTGT+TGG | + | chr4_1:84279861-84279880 | None:intergenic | 45.0% | |
| ! | GATTGTGGTGGTGATTGTAG+GGG | + | chr4_1:84279869-84279888 | None:intergenic | 45.0% |
| GGACAAGAAGATGATTGTGG+TGG | + | chr4_1:84279881-84279900 | None:intergenic | 45.0% | |
| GAGGGACAAGAAGATGATTG+TGG | + | chr4_1:84279884-84279903 | None:intergenic | 45.0% | |
| GGAAGAGATAAGGAGGAAGA+GGG | + | chr4_1:84279902-84279921 | None:intergenic | 45.0% | |
| TGGAAGAGATAAGGAGGAAG+AGG | + | chr4_1:84279903-84279922 | None:intergenic | 45.0% | |
| ATCTCTTCCATCTTCACCTC+TGG | - | chr4_1:84279913-84279932 | Msa0579530:CDS | 45.0% | |
| GATGACAAATGTAACGGTGG+AGG | + | chr4_1:84280049-84280068 | None:intergenic | 45.0% | |
| CTTGGTGAATGTGATTGTCG+TGG | - | chr4_1:84280230-84280249 | Msa0579530:CDS | 45.0% | |
| ! | TTGTCGTGGTGGAATCATGT+TGG | - | chr4_1:84280244-84280263 | Msa0579530:CDS | 45.0% |
| ! | TGTCGTGGTGGAATCATGTT+GGG | - | chr4_1:84280245-84280264 | Msa0579530:CDS | 45.0% |
| AACTTCCAACTTCTCCTCAG+CGG | + | chr4_1:84280279-84280298 | None:intergenic | 45.0% | |
| !! | CACTTGGGCACTTATTTTCG+TGG | - | chr4_1:84280383-84280402 | Msa0579530:CDS | 45.0% |
| CGTGGTTTCTCCTATACTTG+TGG | - | chr4_1:84280401-84280420 | Msa0579530:CDS | 45.0% | |
| GGTGGAATTTGGGAAGGAAA+AGG | - | chr4_1:84280491-84280510 | Msa0579530:CDS | 45.0% | |
| GGGAAGATACACTTACTTGG+TGG | - | chr4_1:84280516-84280535 | Msa0579530:CDS | 45.0% | |
| TGGTGATTGTAGGGGATTGT+TGG | + | chr4_1:84279861-84279880 | None:intergenic | 45.0% | |
| ! | GATTGTGGTGGTGATTGTAG+GGG | + | chr4_1:84279869-84279888 | None:intergenic | 45.0% |
| GGACAAGAAGATGATTGTGG+TGG | + | chr4_1:84279881-84279900 | None:intergenic | 45.0% | |
| GAGGGACAAGAAGATGATTG+TGG | + | chr4_1:84279884-84279903 | None:intergenic | 45.0% | |
| GGAAGAGATAAGGAGGAAGA+GGG | + | chr4_1:84279902-84279921 | None:intergenic | 45.0% | |
| TGGAAGAGATAAGGAGGAAG+AGG | + | chr4_1:84279903-84279922 | None:intergenic | 45.0% | |
| ATCTCTTCCATCTTCACCTC+TGG | - | chr4_1:84279913-84279932 | Msa0579530:CDS | 45.0% | |
| GATGACAAATGTAACGGTGG+AGG | + | chr4_1:84280049-84280068 | None:intergenic | 45.0% | |
| CTTGGTGAATGTGATTGTCG+TGG | - | chr4_1:84280230-84280249 | Msa0579530:CDS | 45.0% | |
| ! | TTGTCGTGGTGGAATCATGT+TGG | - | chr4_1:84280244-84280263 | Msa0579530:CDS | 45.0% |
| ! | TGTCGTGGTGGAATCATGTT+GGG | - | chr4_1:84280245-84280264 | Msa0579530:CDS | 45.0% |
| AACTTCCAACTTCTCCTCAG+CGG | + | chr4_1:84280279-84280298 | None:intergenic | 45.0% | |
| !! | CACTTGGGCACTTATTTTCG+TGG | - | chr4_1:84280383-84280402 | Msa0579530:CDS | 45.0% |
| CGTGGTTTCTCCTATACTTG+TGG | - | chr4_1:84280401-84280420 | Msa0579530:CDS | 45.0% | |
| GGTGGAATTTGGGAAGGAAA+AGG | - | chr4_1:84280491-84280510 | Msa0579530:CDS | 45.0% | |
| GGGAAGATACACTTACTTGG+TGG | - | chr4_1:84280516-84280535 | Msa0579530:CDS | 45.0% | |
| ATGAGGGAGAGGAAAGAGAG+GGG | + | chr4_1:84279817-84279836 | None:intergenic | 50.0% | |
| GATGAGGGAGAGGAAAGAGA+GGG | + | chr4_1:84279818-84279837 | None:intergenic | 50.0% | |
| AGATGAGGGAGAGGAAAGAG+AGG | + | chr4_1:84279819-84279838 | None:intergenic | 50.0% | |
| TGTGTTGGAAGATGAGGGAG+AGG | + | chr4_1:84279828-84279847 | None:intergenic | 50.0% | |
| ! | GCTGTAGGTGATGGTGATGA+TGG | + | chr4_1:84279941-84279960 | None:intergenic | 50.0% |
| CAGGTCGATTAAAGAAGGCG+TGG | + | chr4_1:84279969-84279988 | None:intergenic | 50.0% | |
| GGGGAAGAAAGAAGTGGAGA+TGG | + | chr4_1:84280016-84280035 | None:intergenic | 50.0% | |
| AAGGAGGGGGAAGAAAGAAG+TGG | + | chr4_1:84280022-84280041 | None:intergenic | 50.0% | |
| GACAAATGTAACGGTGGAGG+TGG | + | chr4_1:84280046-84280065 | None:intergenic | 50.0% | |
| GGTGAATGTGATTGTCGTGG+TGG | - | chr4_1:84280233-84280252 | Msa0579530:CDS | 50.0% | |
| ! | GTCGTGGTGGAATCATGTTG+GGG | - | chr4_1:84280246-84280265 | Msa0579530:CDS | 50.0% |
| TTGAACCGCTGAGGAGAAGT+TGG | - | chr4_1:84280271-84280290 | Msa0579530:CDS | 50.0% | |
| GCTGAGGAGAAGTTGGAAGT+TGG | - | chr4_1:84280278-84280297 | Msa0579530:CDS | 50.0% | |
| CTGCAAGGAGAAAGTTGCAG+AGG | - | chr4_1:84280470-84280489 | Msa0579530:CDS | 50.0% | |
| CAAGGAGAAAGTTGCAGAGG+TGG | - | chr4_1:84280473-84280492 | Msa0579530:CDS | 50.0% | |
| TGCAGAGGTGGAATTTGGGA+AGG | - | chr4_1:84280485-84280504 | Msa0579530:CDS | 50.0% | |
| ATGAGGGAGAGGAAAGAGAG+GGG | + | chr4_1:84279817-84279836 | None:intergenic | 50.0% | |
| GATGAGGGAGAGGAAAGAGA+GGG | + | chr4_1:84279818-84279837 | None:intergenic | 50.0% | |
| AGATGAGGGAGAGGAAAGAG+AGG | + | chr4_1:84279819-84279838 | None:intergenic | 50.0% | |
| TGTGTTGGAAGATGAGGGAG+AGG | + | chr4_1:84279828-84279847 | None:intergenic | 50.0% | |
| ! | GCTGTAGGTGATGGTGATGA+TGG | + | chr4_1:84279941-84279960 | None:intergenic | 50.0% |
| CAGGTCGATTAAAGAAGGCG+TGG | + | chr4_1:84279969-84279988 | None:intergenic | 50.0% | |
| GGGGAAGAAAGAAGTGGAGA+TGG | + | chr4_1:84280016-84280035 | None:intergenic | 50.0% | |
| AAGGAGGGGGAAGAAAGAAG+TGG | + | chr4_1:84280022-84280041 | None:intergenic | 50.0% | |
| GACAAATGTAACGGTGGAGG+TGG | + | chr4_1:84280046-84280065 | None:intergenic | 50.0% | |
| GGTGAATGTGATTGTCGTGG+TGG | - | chr4_1:84280233-84280252 | Msa0579530:CDS | 50.0% | |
| ! | GTCGTGGTGGAATCATGTTG+GGG | - | chr4_1:84280246-84280265 | Msa0579530:CDS | 50.0% |
| TTGAACCGCTGAGGAGAAGT+TGG | - | chr4_1:84280271-84280290 | Msa0579530:CDS | 50.0% | |
| GCTGAGGAGAAGTTGGAAGT+TGG | - | chr4_1:84280278-84280297 | Msa0579530:CDS | 50.0% | |
| CTGCAAGGAGAAAGTTGCAG+AGG | - | chr4_1:84280470-84280489 | Msa0579530:CDS | 50.0% | |
| CAAGGAGAAAGTTGCAGAGG+TGG | - | chr4_1:84280473-84280492 | Msa0579530:CDS | 50.0% | |
| TGCAGAGGTGGAATTTGGGA+AGG | - | chr4_1:84280485-84280504 | Msa0579530:CDS | 50.0% | |
| GAGAGAGTGAGGAAGTGACG+AGG | + | chr4_1:84279778-84279797 | None:intergenic | 55.0% | |
| GGAAGATGAGGGAGAGAGTG+AGG | + | chr4_1:84279789-84279808 | None:intergenic | 55.0% | |
| GAGGGGAAGGAGGAAGATGA+GGG | + | chr4_1:84279800-84279819 | None:intergenic | 55.0% | |
| AGAGGGGAAGGAGGAAGATG+AGG | + | chr4_1:84279801-84279820 | None:intergenic | 55.0% | |
| AGAGGAAAGAGAGGGGAAGG+AGG | + | chr4_1:84279810-84279829 | None:intergenic | 55.0% | |
| GTGGTAGACGCTGTAGGTGA+TGG | + | chr4_1:84279950-84279969 | None:intergenic | 55.0% | |
| ATGTAACGGTGGAGGTGGCA+AGG | + | chr4_1:84280041-84280060 | None:intergenic | 55.0% | |
| !!! | GTTGGGGTTTTGAACCGCTG+AGG | - | chr4_1:84280262-84280281 | Msa0579530:CDS | 55.0% |
| GAGAGAGTGAGGAAGTGACG+AGG | + | chr4_1:84279778-84279797 | None:intergenic | 55.0% | |
| GGAAGATGAGGGAGAGAGTG+AGG | + | chr4_1:84279789-84279808 | None:intergenic | 55.0% | |
| GAGGGGAAGGAGGAAGATGA+GGG | + | chr4_1:84279800-84279819 | None:intergenic | 55.0% | |
| AGAGGGGAAGGAGGAAGATG+AGG | + | chr4_1:84279801-84279820 | None:intergenic | 55.0% | |
| AGAGGAAAGAGAGGGGAAGG+AGG | + | chr4_1:84279810-84279829 | None:intergenic | 55.0% | |
| GTGGTAGACGCTGTAGGTGA+TGG | + | chr4_1:84279950-84279969 | None:intergenic | 55.0% | |
| ATGTAACGGTGGAGGTGGCA+AGG | + | chr4_1:84280041-84280060 | None:intergenic | 55.0% | |
| !!! | GTTGGGGTTTTGAACCGCTG+AGG | - | chr4_1:84280262-84280281 | Msa0579530:CDS | 55.0% |
| GGGAGAGGAAAGAGAGGGGA+AGG | + | chr4_1:84279813-84279832 | None:intergenic | 60.0% | |
| GATGGCGCCAGAGGTGAAGA+TGG | + | chr4_1:84279923-84279942 | None:intergenic | 60.0% | |
| !! | GATGGTGATGATGGCGCCAG+AGG | + | chr4_1:84279932-84279951 | None:intergenic | 60.0% |
| ! | GAAGGCGTGGTAGACGCTGT+AGG | + | chr4_1:84279956-84279975 | None:intergenic | 60.0% |
| AACGGTGGAGGTGGCAAGGA+GGG | + | chr4_1:84280037-84280056 | None:intergenic | 60.0% | |
| TAACGGTGGAGGTGGCAAGG+AGG | + | chr4_1:84280038-84280057 | None:intergenic | 60.0% | |
| GGGAGAGGAAAGAGAGGGGA+AGG | + | chr4_1:84279813-84279832 | None:intergenic | 60.0% | |
| GATGGCGCCAGAGGTGAAGA+TGG | + | chr4_1:84279923-84279942 | None:intergenic | 60.0% | |
| !! | GATGGTGATGATGGCGCCAG+AGG | + | chr4_1:84279932-84279951 | None:intergenic | 60.0% |
| ! | GAAGGCGTGGTAGACGCTGT+AGG | + | chr4_1:84279956-84279975 | None:intergenic | 60.0% |
| AACGGTGGAGGTGGCAAGGA+GGG | + | chr4_1:84280037-84280056 | None:intergenic | 60.0% | |
| TAACGGTGGAGGTGGCAAGG+AGG | + | chr4_1:84280038-84280057 | None:intergenic | 60.0% | |
| ACGGTGGAGGTGGCAAGGAG+GGG | + | chr4_1:84280036-84280055 | None:intergenic | 65.0% | |
| ACGGTGGAGGTGGCAAGGAG+GGG | + | chr4_1:84280036-84280055 | None:intergenic | 65.0% | |
| CGGTGGAGGTGGCAAGGAGG+GGG | + | chr4_1:84280035-84280054 | None:intergenic | 70.0% | |
| CGGTGGAGGTGGCAAGGAGG+GGG | + | chr4_1:84280035-84280054 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 84279718 | 84280554 | 84279718 | ID=Msa0579530;Name=Msa0579530 |
| chr4_1 | mRNA | 84279718 | 84280554 | 84279718 | ID=Msa0579530-mRNA-1;Parent=Msa0579530;Name=Msa0579530-mRNA-1;_AED=0.26;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|278 |
| chr4_1 | exon | 84279718 | 84280554 | 84279718 | ID=Msa0579530-mRNA-1:exon:30835;Parent=Msa0579530-mRNA-1 |
| chr4_1 | CDS | 84279718 | 84280554 | 84279718 | ID=Msa0579530-mRNA-1:cds;Parent=Msa0579530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
