Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652710 | XP_013456939.2 | 87.885 | 520 | 56 | 4 | 1 | 518 | 1 | 515 | 0.0 | 840 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652710 | sp|O23305|Y4449_ARATH | 33.758 | 314 | 178 | 8 | 5 | 313 | 1 | 289 | 4.12e-33 | 133 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034830 | Msa0652710 | 0.806937 | 6.453470e-50 | -8.615850e-47 |
| Msa0035140 | Msa0652710 | 0.806573 | 7.702353e-50 | -8.615850e-47 |
| Msa0042640 | Msa0652710 | 0.875142 | 3.889932e-68 | -8.615850e-47 |
| Msa0048510 | Msa0652710 | 0.800652 | 1.303560e-48 | -8.615850e-47 |
| Msa0075530 | Msa0652710 | 0.826875 | 2.134198e-54 | -8.615850e-47 |
| Msa0077340 | Msa0652710 | 0.819845 | 9.376393e-53 | -8.615850e-47 |
| Msa0077560 | Msa0652710 | 0.832653 | 8.359685e-56 | -8.615850e-47 |
| Msa0094790 | Msa0652710 | 0.815524 | 8.848006e-52 | -8.615850e-47 |
| Msa0621710 | Msa0652710 | 0.816371 | 5.724458e-52 | -8.615850e-47 |
| Msa0652710 | Msa0666700 | 0.805414 | 1.350751e-49 | -8.615850e-47 |
| Msa0652710 | Msa0674480 | 0.820237 | 7.627793e-53 | -8.615850e-47 |
| Msa0652710 | Msa0709440 | 0.806440 | 8.216687e-50 | -8.615850e-47 |
| Msa0652710 | Msa0740710 | 0.822252 | 2.616908e-53 | -8.615850e-47 |
| Msa0652710 | Msa0761670 | 0.801430 | 9.039383e-49 | -8.615850e-47 |
| Msa0652710 | Msa0773630 | 0.802487 | 5.482037e-49 | -8.615850e-47 |
| Msa0652710 | Msa0780910 | 0.834738 | 2.519212e-56 | -8.615850e-47 |
| Msa0652710 | Msa0795750 | 0.803826 | 2.895956e-49 | -8.615850e-47 |
| Msa0652710 | Msa0795870 | 0.802430 | 5.630493e-49 | -8.615850e-47 |
| Msa0652710 | Msa0799050 | 0.806630 | 7.493533e-50 | -8.615850e-47 |
| Msa0652710 | Msa0815970 | 0.819456 | 1.150502e-52 | -8.615850e-47 |
| Msa0652710 | Msa0821160 | 0.821905 | 3.148989e-53 | -8.615850e-47 |
| Msa0652710 | Msa0833650 | 0.813175 | 2.923253e-51 | -8.615850e-47 |
| Msa0652710 | Msa0840520 | 0.800342 | 1.507380e-48 | -8.615850e-47 |
| Msa0652710 | Msa0900760 | 0.831162 | 1.951585e-55 | -8.615850e-47 |
| Msa0652710 | Msa0909760 | 0.829567 | 4.790002e-55 | -8.615850e-47 |
| Msa0652710 | Msa1021590 | 0.822779 | 1.972932e-53 | -8.615850e-47 |
| Msa0652710 | Msa1072940 | 0.807586 | 4.702582e-50 | -8.615850e-47 |
| Msa0652710 | Msa1084530 | 0.806983 | 6.309058e-50 | -8.615850e-47 |
| Msa0652710 | Msa1116660 | 0.812549 | 4.009854e-51 | -8.615850e-47 |
| Msa0652710 | Msa1125820 | 0.803084 | 4.125824e-49 | -8.615850e-47 |
| Msa0652710 | Msa1125990 | 0.807885 | 4.062818e-50 | -8.615850e-47 |
| Msa0652710 | Msa1132840 | 0.811129 | 8.167941e-51 | -8.615850e-47 |
| Msa0652710 | Msa1148960 | 0.803617 | 3.199682e-49 | -8.615850e-47 |
| Msa0652710 | Msa1171290 | 0.804724 | 1.882861e-49 | -8.615850e-47 |
| Msa0652710 | Msa1192560 | 0.812056 | 5.136427e-51 | -8.615850e-47 |
| Msa0652710 | Msa1192590 | 0.811070 | 8.414306e-51 | -8.615850e-47 |
| Msa0652710 | Msa1228580 | 0.806095 | 9.712704e-50 | -8.615850e-47 |
| Msa0652710 | Msa1240260 | 0.803024 | 4.245411e-49 | -8.615850e-47 |
| Msa0652710 | Msa1254540 | 0.801884 | 7.292474e-49 | -8.615850e-47 |
| Msa0652710 | Msa1303560 | 0.800305 | 1.533870e-48 | -8.615850e-47 |
| Msa0652710 | Msa1303650 | 0.804681 | 1.921762e-49 | -8.615850e-47 |
| Msa0652710 | Msa1308850 | 0.809450 | 1.880967e-50 | -8.615850e-47 |
| Msa0652710 | Msa1368750 | 0.817492 | 3.205909e-52 | -8.615850e-47 |
| Msa0652710 | Msa1372040 | 0.801932 | 7.130657e-49 | -8.615850e-47 |
| Msa0652710 | Msa1374790 | 0.819096 | 1.389670e-52 | -8.615850e-47 |
| Msa0652710 | Msa1383310 | 0.801513 | 8.690298e-49 | -8.615850e-47 |
| Msa0652710 | Msa1384150 | 0.808425 | 3.117662e-50 | -8.615850e-47 |
| Msa0652710 | Msa1405460 | 0.829331 | 5.466023e-55 | -8.615850e-47 |
| Msa0652710 | Msa1409410 | 0.828869 | 7.074445e-55 | -8.615850e-47 |
| Msa0652710 | Msa1435960 | 0.815897 | 7.306138e-52 | -8.615850e-47 |
| Msa0652710 | Msa1436620 | 0.803126 | 4.045435e-49 | -8.615850e-47 |
| Msa0652710 | Msa1450190 | 0.820372 | 7.100783e-53 | -8.615850e-47 |
| Msa0652710 | Msa1451820 | 0.818005 | 2.456188e-52 | -8.615850e-47 |
| Msa0125360 | Msa0652710 | 0.811050 | 8.498576e-51 | -8.615850e-47 |
| Msa0140200 | Msa0652710 | 0.825301 | 5.050181e-54 | -8.615850e-47 |
| Msa0140380 | Msa0652710 | 0.801929 | 7.141136e-49 | -8.615850e-47 |
| Msa0143670 | Msa0652710 | 0.803515 | 3.360416e-49 | -8.615850e-47 |
| Msa0158860 | Msa0652710 | 0.816712 | 4.800672e-52 | -8.615850e-47 |
| Msa0178450 | Msa0652710 | 0.825847 | 3.748768e-54 | -8.615850e-47 |
| Msa0218020 | Msa0652710 | 0.821946 | 3.080753e-53 | -8.615850e-47 |
| Msa0230840 | Msa0652710 | 0.814770 | 1.300768e-51 | -8.615850e-47 |
| Msa0380490 | Msa0652710 | 0.809787 | 1.591888e-50 | -8.615850e-47 |
| Msa0383000 | Msa0652710 | 0.805270 | 1.447899e-49 | -8.615850e-47 |
| Msa0402070 | Msa0652710 | -0.813937 | 1.987256e-51 | -8.615850e-47 |
| Msa0430000 | Msa0652710 | 0.814049 | 1.877436e-51 | -8.615850e-47 |
| Msa0431200 | Msa0652710 | 0.802594 | 5.209902e-49 | -8.615850e-47 |
| Msa0432010 | Msa0652710 | 0.818726 | 1.686537e-52 | -8.615850e-47 |
| Msa0433150 | Msa0652710 | 0.809399 | 1.929436e-50 | -8.615850e-47 |
| Msa0481890 | Msa0652710 | 0.802045 | 6.758289e-49 | -8.615850e-47 |
| Msa0269210 | Msa0652710 | 0.803209 | 3.889103e-49 | -8.615850e-47 |
| Msa0298470 | Msa0652710 | 0.803752 | 3.000066e-49 | -8.615850e-47 |
| Msa0500570 | Msa0652710 | 0.818765 | 1.652228e-52 | -8.615850e-47 |
| Msa0524520 | Msa0652710 | 0.803788 | 2.948613e-49 | -8.615850e-47 |
| Msa0529030 | Msa0652710 | 0.826560 | 2.536613e-54 | -8.615850e-47 |
| Msa0580200 | Msa0652710 | 0.808036 | 3.772891e-50 | -8.615850e-47 |
| Msa0580370 | Msa0652710 | 0.813959 | 1.965093e-51 | -8.615850e-47 |
| Msa0580810 | Msa0652710 | 0.808385 | 3.179414e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652710 | MtrunA17_Chr4g0046411 | 87.885 | 520 | 56 | 4 | 1 | 518 | 1 | 515 | 0.0 | 840 |
| Msa0652710 | MtrunA17_Chr8g0367734 | 87.308 | 520 | 59 | 4 | 1 | 518 | 26 | 540 | 0.0 | 835 |
| Msa0652710 | MtrunA17_Chr3g0127721 | 78.351 | 388 | 64 | 8 | 135 | 518 | 19 | 390 | 0.0 | 529 |
| Msa0652710 | MtrunA17_Chr4g0046421 | 62.319 | 138 | 49 | 3 | 1 | 137 | 1 | 136 | 4.19e-47 | 165 |
| Msa0652710 | MtrunA17_Chr4g0046421 | 73.404 | 94 | 22 | 2 | 423 | 515 | 183 | 274 | 1.33e-34 | 131 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0652710 | AT4G14490.1 | 33.758 | 314 | 178 | 8 | 5 | 313 | 1 | 289 | 4.18e-34 | 133 |
| Msa0652710 | AT3G02400.1 | 58.252 | 103 | 43 | 0 | 6 | 108 | 2 | 104 | 2.01e-32 | 131 |
| Msa0652710 | AT3G02400.2 | 58.252 | 103 | 43 | 0 | 6 | 108 | 2 | 104 | 2.96e-32 | 130 |
Find 150 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTTCAATTCCAGTAAT+TGG | 0.112180 | 4_3:-60409713 | Msa0652710:CDS |
| TGATTCTGCTGATGTGAATT+TGG | 0.240026 | 4_3:-60409346 | Msa0652710:CDS |
| GTGGTAAAAGTGTTAAATTT+AGG | 0.256360 | 4_3:-60409488 | Msa0652710:CDS |
| TGGTAAAAGTGTTAAATTTA+GGG | 0.262471 | 4_3:-60409487 | Msa0652710:CDS |
| GATTTGGAGAAGATGAATTT+AGG | 0.263231 | 4_3:-60408502 | Msa0652710:CDS |
| GTTTCATCATGTATCTGTTT+TGG | 0.281623 | 4_3:+60408448 | None:intergenic |
| AGGTGAGTGGTTTGATTTCT+TGG | 0.284800 | 4_3:-60408482 | Msa0652710:CDS |
| CGTTTCCGTAGGGTTACTTT+GGG | 0.293839 | 4_3:+60409551 | None:intergenic |
| CTCGTAACCTTCATCGGTTC+AGG | 0.305130 | 4_3:+60409396 | None:intergenic |
| GAATTTGAGGAATAAGAAAA+TGG | 0.307967 | 4_3:-60409064 | Msa0652710:CDS |
| TGAATTGAGTGTTGGAGATT+TGG | 0.321055 | 4_3:-60409034 | Msa0652710:CDS |
| TGCTAAAGGAAAGGAGAAAT+TGG | 0.331726 | 4_3:-60408803 | Msa0652710:CDS |
| GGATGAGAATTGGCCTGATT+TGG | 0.337680 | 4_3:-60408518 | Msa0652710:CDS |
| TGATTCGAGTAATGGGGATT+TGG | 0.337874 | 4_3:-60409142 | Msa0652710:CDS |
| TGCAGTTGAGATTTGTGATT+CGG | 0.346144 | 4_3:-60409268 | Msa0652710:CDS |
| ATCTGTGAGAATCCAATTAC+TGG | 0.348786 | 4_3:+60409701 | None:intergenic |
| TCCAATTACTGGAATTGAAA+TGG | 0.350080 | 4_3:+60409712 | None:intergenic |
| ACAAGGAATGCGAAGAATAA+AGG | 0.353579 | 4_3:-60408967 | Msa0652710:CDS |
| AGGTTTGTGATTCGAGTAAT+GGG | 0.361371 | 4_3:-60409149 | Msa0652710:CDS |
| AAGTGTTAAATTTAGGGTTC+CGG | 0.384136 | 4_3:-60409481 | Msa0652710:CDS |
| CAAGGAATGCGAAGAATAAA+GGG | 0.387553 | 4_3:-60408966 | Msa0652710:CDS |
| GCAGTTGAGATTTGTGATTC+GGG | 0.395223 | 4_3:-60409267 | Msa0652710:CDS |
| TGGTGGATTCGGGTTTGAAT+AGG | 0.396059 | 4_3:+60409811 | None:intergenic |
| ATTTGAATGGGGATGAGAAT+TGG | 0.396400 | 4_3:-60408528 | Msa0652710:CDS |
| TCGTCACCAACGCACTCTTC+CGG | 0.397410 | 4_3:+60408685 | None:intergenic |
| AAATTCATCTTCTCCAAATC+AGG | 0.398213 | 4_3:+60408505 | None:intergenic |
| CCATCACCAACACGCTCTTC+TGG | 0.402421 | 4_3:+60408733 | None:intergenic |
| TGGAAGAAGTGAAGAAGAAT+AGG | 0.402496 | 4_3:-60409212 | Msa0652710:CDS |
| TGGATTCGGGTTTGAATAGG+TGG | 0.412924 | 4_3:+60409814 | None:intergenic |
| TGATTCGGGTAATGGTGATT+TGG | 0.414842 | 4_3:-60409253 | Msa0652710:CDS |
| CTGAGATGAAAAGGGGTATT+CGG | 0.426172 | 4_3:+60409633 | None:intergenic |
| TCGTTTCCGTAGGGTTACTT+TGG | 0.426738 | 4_3:+60409550 | None:intergenic |
| GAACCATCGCTGAGATGAAA+AGG | 0.432041 | 4_3:+60409624 | None:intergenic |
| AATTTGAGGAATAAGAAAAT+GGG | 0.432307 | 4_3:-60409063 | Msa0652710:CDS |
| GGAAATACCTGGATCTTTGA+TGG | 0.433151 | 4_3:+60409752 | None:intergenic |
| GAATAAAGGGGTTGTGGTTG+AGG | 0.439491 | 4_3:-60408953 | Msa0652710:CDS |
| GAAAACAAGGGGTGGTGCTA+AGG | 0.440899 | 4_3:-60408887 | Msa0652710:CDS |
| GAGATTTGTGATTCGGGTAA+TGG | 0.443798 | 4_3:-60409261 | Msa0652710:CDS |
| TTGAATGGTGATGATGAATC+TGG | 0.448371 | 4_3:-60409432 | Msa0652710:CDS |
| CCCGAATCCACCATCAAAAT+CGG | 0.448567 | 4_3:-60409801 | Msa0652710:CDS |
| GAGGTTTGTGATTCGAGTAA+TGG | 0.452724 | 4_3:-60409150 | Msa0652710:CDS |
| AGTAGAAGATAAACCTATGA+AGG | 0.453511 | 4_3:-60409526 | Msa0652710:CDS |
| TAAAGAGAAGGAGAAATTAC+CGG | 0.453884 | 4_3:-60408704 | Msa0652710:CDS |
| GGAGATTGTGAAAGAGAAAG+TGG | 0.454752 | 4_3:-60409121 | Msa0652710:CDS |
| TGAGGGTGACAAGGAATTTG+AGG | 0.455722 | 4_3:-60409077 | Msa0652710:CDS |
| AAAGGGGTATTCGGAGGAAC+AGG | 0.462122 | 4_3:+60409642 | None:intergenic |
| GACGTACTCGCGGAGTCTCT+CGG | 0.467250 | 4_3:+60408393 | None:intergenic |
| GGTTTCTCCCTTACGTGGAC+CGG | 0.470919 | 4_3:+60409836 | None:intergenic |
| ATTCCTCGCCGGTCCACGTA+AGG | 0.474482 | 4_3:-60409844 | Msa0652710:CDS |
| AAGAAGTGAAGAAGAATAGG+AGG | 0.475395 | 4_3:-60409209 | Msa0652710:CDS |
| CCAGAAGAGCGTGTTGGTGA+TGG | 0.475527 | 4_3:-60408733 | Msa0652710:CDS |
| GAAGATTTGAGCTTGGTGAA+TGG | 0.484158 | 4_3:-60408931 | Msa0652710:CDS |
| AAAACAAGGGGTGGTGCTAA+GGG | 0.484261 | 4_3:-60408886 | Msa0652710:CDS |
| TTACGAGGAATACGCGGAGC+AGG | 0.485036 | 4_3:-60409380 | Msa0652710:CDS |
| TCTTCTACTATCGTTTCCGT+AGG | 0.497993 | 4_3:+60409540 | None:intergenic |
| TGCGAAGAATAAAGGGGTTG+TGG | 0.500370 | 4_3:-60408959 | Msa0652710:CDS |
| GGATTCGGGTTTGAATAGGT+GGG | 0.504613 | 4_3:+60409815 | None:intergenic |
| AAAACAGATACATGATGAAA+CGG | 0.510214 | 4_3:-60408446 | Msa0652710:CDS |
| TAAGGGGAAGAAGAAATTGC+AGG | 0.513857 | 4_3:-60408869 | Msa0652710:CDS |
| GGTATTCGGAGGAACAGGTT+TGG | 0.514934 | 4_3:+60409647 | None:intergenic |
| ATGTATCAGAATCAGAAAGC+TGG | 0.516426 | 4_3:-60408367 | Msa0652710:CDS |
| ATTGATGAAATTGACGAGGA+TGG | 0.516875 | 4_3:+60409575 | None:intergenic |
| CTTGTCATCCTCACACTCCT+CGG | 0.521001 | 4_3:+60408985 | None:intergenic |
| GAATAAGAAGAATACGGTTG+AGG | 0.521957 | 4_3:-60409169 | Msa0652710:CDS |
| AACAGGTTTGGTGTCTAAAA+CGG | 0.523792 | 4_3:+60409659 | None:intergenic |
| AGTAACTTCACCGATCTTGA+TGG | 0.524256 | 4_3:+60409599 | None:intergenic |
| TTCGAAGAATAAGAAGAATA+CGG | 0.526530 | 4_3:-60409175 | Msa0652710:CDS |
| GAGGAAGAGTGTGTTGGTGA+TGG | 0.527304 | 4_3:-60408781 | Msa0652710:CDS |
| AGGTGTTTGGTGGAAATACC+TGG | 0.527977 | 4_3:+60409741 | None:intergenic |
| GTATTCCTCGTAACCTTCAT+CGG | 0.528796 | 4_3:+60409390 | None:intergenic |
| AAGTGAAGAAGAAGAATGTG+AGG | 0.531849 | 4_3:-60409095 | Msa0652710:CDS |
| GAAATACCTGGATCTTTGAT+GGG | 0.532079 | 4_3:+60409753 | None:intergenic |
| CAGGAAGAGATTGTTGGTGA+TGG | 0.532227 | 4_3:-60408850 | Msa0652710:CDS |
| AACCTCCCCATCAAAGATCC+AGG | 0.532781 | 4_3:-60409759 | Msa0652710:CDS |
| AGAAGAATGTGAGGGTGACA+AGG | 0.532966 | 4_3:-60409086 | Msa0652710:CDS |
| AACCATCGCTGAGATGAAAA+GGG | 0.540672 | 4_3:+60409625 | None:intergenic |
| GAGAATTGTGATGATGCTAA+AGG | 0.541257 | 4_3:-60408817 | Msa0652710:CDS |
| ATCCACCATCAAAATCGGTC+GGG | 0.543736 | 4_3:-60409796 | Msa0652710:CDS |
| AAATTGCAGGAAGAGATTGT+TGG | 0.543947 | 4_3:-60408856 | Msa0652710:CDS |
| AGGAATTGAAGTGTGAGAGA+TGG | 0.546456 | 4_3:+60409861 | None:intergenic |
| TGGTGTGAAGGAGAAGGTGG+AGG | 0.547202 | 4_3:-60409010 | Msa0652710:CDS |
| GATGAAGATGAAATGTTGAA+TGG | 0.547309 | 4_3:-60409447 | Msa0652710:CDS |
| CTTCTACTATCGTTTCCGTA+GGG | 0.549514 | 4_3:+60409541 | None:intergenic |
| ATGGATAGTGAGGTGTTTGG+TGG | 0.549947 | 4_3:+60409731 | None:intergenic |
| TGATGGAGATGATAAAGAAA+AGG | 0.550272 | 4_3:-60408764 | Msa0652710:CDS |
| CAAGAAAAGTGTGTTGGTGA+TGG | 0.550772 | 4_3:-60408589 | Msa0652710:CDS |
| GGGGTTTCTGAATTGAGTGT+TGG | 0.552207 | 4_3:-60409042 | Msa0652710:CDS |
| TGATGGAGAAGATAAAGAGA+AGG | 0.555886 | 4_3:-60408716 | Msa0652710:CDS |
| TGATGAAGAAGATAAAGAGA+AGG | 0.556018 | 4_3:-60408620 | Msa0652710:CDS |
| GGATCGACCTGAACCGATGA+AGG | 0.556237 | 4_3:-60409403 | Msa0652710:CDS |
| TGGAGGAGCCGAGGAGTGTG+AGG | 0.560610 | 4_3:-60408993 | Msa0652710:CDS |
| TACCTGGATCTTTGATGGGG+AGG | 0.560776 | 4_3:+60409757 | None:intergenic |
| AGGAGAAGGTGGAGGAGCCG+AGG | 0.563651 | 4_3:-60409002 | Msa0652710:CDS |
| GAGATTGTTGGTGATGGAGA+TGG | 0.565638 | 4_3:-60408844 | Msa0652710:CDS |
| TGGAGATTTGGATGGTGTGA+AGG | 0.565692 | 4_3:-60409022 | Msa0652710:CDS |
| AGAAGATGAATTTAGGTGAG+TGG | 0.565794 | 4_3:-60408495 | Msa0652710:CDS |
| TCTTCATCAATACTCTGTAC+CGG | 0.566094 | 4_3:+60409462 | None:intergenic |
| TTGTGATGATGCTAAAGGAA+AGG | 0.566732 | 4_3:-60408812 | Msa0652710:CDS |
| GGATGGTGTGAAGGAGAAGG+TGG | 0.569564 | 4_3:-60409013 | Msa0652710:CDS |
| GAAATGGATAGTGAGGTGTT+TGG | 0.570327 | 4_3:+60409728 | None:intergenic |
| TGGTGATTTGGATGATGTGA+AGG | 0.571971 | 4_3:-60409241 | Msa0652710:CDS |
| CTCACACTTCAATTCCTCGC+CGG | 0.576251 | 4_3:-60409855 | Msa0652710:CDS |
| AAGTGTGTTGGTGATGGAGA+TGG | 0.577597 | 4_3:-60408583 | Msa0652710:CDS |
| ATTTGAGGAATAAGAAAATG+GGG | 0.577941 | 4_3:-60409062 | Msa0652710:CDS |
| TAAAGGAAAGGAGAAATTGG+AGG | 0.581664 | 4_3:-60408800 | Msa0652710:CDS |
| GGTTGAGGAAGATTTGAGCT+TGG | 0.583457 | 4_3:-60408938 | Msa0652710:CDS |
| CGAGGAGTGTGAGGATGACA+AGG | 0.584161 | 4_3:-60408984 | Msa0652710:CDS |
| AGAAGAATAGGAGGGTGACA+AGG | 0.584355 | 4_3:-60409200 | Msa0652710:CDS |
| CGAAGAATGTGAGGGTGACG+AGG | 0.585927 | 4_3:-60409311 | Msa0652710:CDS |
| TTGAGTGTTGGAGATTTGGA+TGG | 0.587988 | 4_3:-60409030 | Msa0652710:CDS |
| AGGTGGGTTTCTCCCTTACG+TGG | 0.589154 | 4_3:+60409831 | None:intergenic |
| GATGGTTCCACCATCAAGAT+CGG | 0.590964 | 4_3:-60409609 | Msa0652710:CDS |
| AAATCACAAGAAAAGTGTGT+TGG | 0.591822 | 4_3:-60408595 | Msa0652710:CDS |
| TTTGGATGGTGTGAAGGAGA+AGG | 0.592111 | 4_3:-60409016 | Msa0652710:CDS |
| AGAAGTGAAGAAGAATAGGA+GGG | 0.597849 | 4_3:-60409208 | Msa0652710:CDS |
| TTCCTCGCCGGTCCACGTAA+GGG | 0.599574 | 4_3:-60409843 | Msa0652710:CDS |
| GATTGTGAAAGAGAAAGTGG+AGG | 0.601927 | 4_3:-60409118 | Msa0652710:CDS |
| TTTGAGCTTGGTGAATGGAG+TGG | 0.602709 | 4_3:-60408926 | Msa0652710:CDS |
| AATTTACCAGAAGAGCGTGT+TGG | 0.606294 | 4_3:-60408739 | Msa0652710:CDS |
| CTCCCTTACGTGGACCGGCG+AGG | 0.606537 | 4_3:+60409841 | None:intergenic |
| GGATGATGTGAAGGAGAAGG+TGG | 0.607993 | 4_3:-60409232 | Msa0652710:CDS |
| ACAGATCTCGATTCTTCTAA+CGG | 0.609144 | 4_3:-60409684 | Msa0652710:CDS |
| AAATTACCGGAAGAGTGCGT+TGG | 0.609976 | 4_3:-60408691 | Msa0652710:CDS |
| AATCCACCATCAAAATCGGT+CGG | 0.610443 | 4_3:-60409797 | Msa0652710:CDS |
| GGTTTGTGATTCGAGTAATG+GGG | 0.612127 | 4_3:-60409148 | Msa0652710:CDS |
| TAAAATGGAAGAACAACAAG+TGG | 0.617661 | 4_3:-60409886 | None:intergenic |
| GTAGAAGATAAACCTATGAA+GGG | 0.620399 | 4_3:-60409525 | Msa0652710:CDS |
| TTTGAGGAATAAGAAAATGG+GGG | 0.622895 | 4_3:-60409061 | Msa0652710:CDS |
| AAACAAGGGGTGGTGCTAAG+GGG | 0.623711 | 4_3:-60408885 | Msa0652710:CDS |
| AACTTCACCGATCTTGATGG+TGG | 0.623905 | 4_3:+60409602 | None:intergenic |
| CAATCCCCAAAGTAACCCTA+CGG | 0.625349 | 4_3:-60409556 | Msa0652710:CDS |
| TGGAATTGAAATGGATAGTG+AGG | 0.627666 | 4_3:+60409721 | None:intergenic |
| GTTTCCGTAGGGTTACTTTG+GGG | 0.630023 | 4_3:+60409552 | None:intergenic |
| CTGAACCGATGAAGGTTACG+AGG | 0.630587 | 4_3:-60409395 | Msa0652710:CDS |
| TGATGGGGAGGTTGTTGCCG+CGG | 0.633183 | 4_3:+60409769 | None:intergenic |
| TGATGATGAATCTGGAATTG+TGG | 0.633719 | 4_3:-60409424 | Msa0652710:CDS |
| AGTGAAGAAGAAGAATGTGA+GGG | 0.634672 | 4_3:-60409094 | Msa0652710:CDS |
| CTGTAGTATCGAAGAATGTG+AGG | 0.646172 | 4_3:-60409320 | Msa0652710:CDS |
| CTACATATACTAGCATTCAG+TGG | 0.652902 | 4_3:+60408339 | None:intergenic |
| TGAAGGTTACGAGGAATACG+CGG | 0.654682 | 4_3:-60409386 | Msa0652710:CDS |
| AAAATCGGTCGGGTCATCCG+CGG | 0.657840 | 4_3:-60409786 | Msa0652710:CDS |
| TTTGGATGATGTGAAGGAGA+AGG | 0.671760 | 4_3:-60409235 | Msa0652710:CDS |
| AGATGAAAAGGGGTATTCGG+AGG | 0.674232 | 4_3:+60409636 | None:intergenic |
| AAATACCTGGATCTTTGATG+GGG | 0.678030 | 4_3:+60409754 | None:intergenic |
| ACCATCGCTGAGATGAAAAG+GGG | 0.686692 | 4_3:+60409626 | None:intergenic |
| GGGGATTGATGAAATTGACG+AGG | 0.705490 | 4_3:+60409571 | None:intergenic |
| AAGGAATGCGAAGAATAAAG+GGG | 0.713160 | 4_3:-60408965 | Msa0652710:CDS |
| AAATTGGAGGAAGAGTGTGT+TGG | 0.722760 | 4_3:-60408787 | Msa0652710:CDS |
| GATACATTATGACGTACTCG+CGG | 0.753024 | 4_3:+60408383 | None:intergenic |
| TGTAGTATCGAAGAATGTGA+GGG | 0.756754 | 4_3:-60409319 | Msa0652710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGGTAAAAGTGTTAAATTTA+GGG | - | chr4_3:60408743-60408762 | Msa0652710:CDS | 20.0% |
| !! | AATTTGAGGAATAAGAAAAT+GGG | - | chr4_3:60409167-60409186 | Msa0652710:CDS | 20.0% |
| !! | TAAAGAAAAAGAGAAATTAC+AGG | - | chr4_3:60409574-60409593 | Msa0652710:CDS | 20.0% |
| !! | AAAGAAAAAGAGAATTTGAA+TGG | - | chr4_3:60409689-60409708 | Msa0652710:CDS | 20.0% |
| !! | AAGAAAAAGAGAATTTGAAT+GGG | - | chr4_3:60409690-60409709 | Msa0652710:CDS | 20.0% |
| !!! | TGGTAAAAGTGTTAAATTTA+GGG | - | chr4_3:60408743-60408762 | Msa0652710:CDS | 20.0% |
| !! | AATTTGAGGAATAAGAAAAT+GGG | - | chr4_3:60409167-60409186 | Msa0652710:CDS | 20.0% |
| !! | TAAAGAAAAAGAGAAATTAC+AGG | - | chr4_3:60409574-60409593 | Msa0652710:CDS | 20.0% |
| !! | AAAGAAAAAGAGAATTTGAA+TGG | - | chr4_3:60409689-60409708 | Msa0652710:CDS | 20.0% |
| !! | AAGAAAAAGAGAATTTGAAT+GGG | - | chr4_3:60409690-60409709 | Msa0652710:CDS | 20.0% |
| !!! | GTGGTAAAAGTGTTAAATTT+AGG | - | chr4_3:60408742-60408761 | Msa0652710:CDS | 25.0% |
| ! | TTCGAAGAATAAGAAGAATA+CGG | - | chr4_3:60409055-60409074 | Msa0652710:CDS | 25.0% |
| ! | GAATTTGAGGAATAAGAAAA+TGG | - | chr4_3:60409166-60409185 | Msa0652710:CDS | 25.0% |
| ! | ATTTGAGGAATAAGAAAATG+GGG | - | chr4_3:60409168-60409187 | Msa0652710:CDS | 25.0% |
| ! | ATGTTGAGAAAAAGAAAACA+AGG | - | chr4_3:60409330-60409349 | Msa0652710:CDS | 25.0% |
| ! | TGTTGAGAAAAAGAAAACAA+GGG | - | chr4_3:60409331-60409350 | Msa0652710:CDS | 25.0% |
| ! | AGAAAAAGAGAATTTGAATG+GGG | - | chr4_3:60409691-60409710 | Msa0652710:CDS | 25.0% |
| ! | AAAACAGATACATGATGAAA+CGG | - | chr4_3:60409784-60409803 | Msa0652710:CDS | 25.0% |
| !!! | GTGGTAAAAGTGTTAAATTT+AGG | - | chr4_3:60408742-60408761 | Msa0652710:CDS | 25.0% |
| ! | TTCGAAGAATAAGAAGAATA+CGG | - | chr4_3:60409055-60409074 | Msa0652710:CDS | 25.0% |
| ! | GAATTTGAGGAATAAGAAAA+TGG | - | chr4_3:60409166-60409185 | Msa0652710:CDS | 25.0% |
| ! | ATTTGAGGAATAAGAAAATG+GGG | - | chr4_3:60409168-60409187 | Msa0652710:CDS | 25.0% |
| ! | ATGTTGAGAAAAAGAAAACA+AGG | - | chr4_3:60409330-60409349 | Msa0652710:CDS | 25.0% |
| ! | TGTTGAGAAAAAGAAAACAA+GGG | - | chr4_3:60409331-60409350 | Msa0652710:CDS | 25.0% |
| ! | AGAAAAAGAGAATTTGAATG+GGG | - | chr4_3:60409691-60409710 | Msa0652710:CDS | 25.0% |
| ! | AAAACAGATACATGATGAAA+CGG | - | chr4_3:60409784-60409803 | Msa0652710:CDS | 25.0% |
| TCCATTTCAATTCCAGTAAT+TGG | - | chr4_3:60408517-60408536 | Msa0652710:CDS | 30.0% | |
| TCCAATTACTGGAATTGAAA+TGG | + | chr4_3:60408521-60408540 | None:intergenic | 30.0% | |
| AGTAGAAGATAAACCTATGA+AGG | - | chr4_3:60408704-60408723 | Msa0652710:CDS | 30.0% | |
| GTAGAAGATAAACCTATGAA+GGG | - | chr4_3:60408705-60408724 | Msa0652710:CDS | 30.0% | |
| AAACCTATGAAGGGTAAAAA+AGG | - | chr4_3:60408714-60408733 | Msa0652710:CDS | 30.0% | |
| !!! | TTACCTTTTTTACCCTTCAT+AGG | + | chr4_3:60408720-60408739 | None:intergenic | 30.0% |
| AAGGGTAAAAAAGGTAATAG+TGG | - | chr4_3:60408723-60408742 | Msa0652710:CDS | 30.0% | |
| ! | AAGTGTTAAATTTAGGGTTC+CGG | - | chr4_3:60408749-60408768 | Msa0652710:CDS | 30.0% |
| GATGAAGATGAAATGTTGAA+TGG | - | chr4_3:60408783-60408802 | Msa0652710:CDS | 30.0% | |
| TTTGAGGAATAAGAAAATGG+GGG | - | chr4_3:60409169-60409188 | Msa0652710:CDS | 30.0% | |
| GTTGAGAAAAAGAAAACAAG+GGG | - | chr4_3:60409332-60409351 | Msa0652710:CDS | 30.0% | |
| TGATGGAGATGATAAAGAAA+AGG | - | chr4_3:60409466-60409485 | Msa0652710:CDS | 30.0% | |
| TAAAGAGAAGGAGAAATTAC+CGG | - | chr4_3:60409526-60409545 | Msa0652710:CDS | 30.0% | |
| TGATGAAGAAGATAAAGAGA+AGG | - | chr4_3:60409610-60409629 | Msa0652710:CDS | 30.0% | |
| ! | AAATCACAAGAAAAGTGTGT+TGG | - | chr4_3:60409635-60409654 | Msa0652710:CDS | 30.0% |
| AAATTCATCTTCTCCAAATC+AGG | + | chr4_3:60409728-60409747 | None:intergenic | 30.0% | |
| GATTTGGAGAAGATGAATTT+AGG | - | chr4_3:60409728-60409747 | Msa0652710:CDS | 30.0% | |
| ! | GTTTCATCATGTATCTGTTT+TGG | + | chr4_3:60409785-60409804 | None:intergenic | 30.0% |
| TCCATTTCAATTCCAGTAAT+TGG | - | chr4_3:60408517-60408536 | Msa0652710:CDS | 30.0% | |
| TCCAATTACTGGAATTGAAA+TGG | + | chr4_3:60408521-60408540 | None:intergenic | 30.0% | |
| AGTAGAAGATAAACCTATGA+AGG | - | chr4_3:60408704-60408723 | Msa0652710:CDS | 30.0% | |
| GTAGAAGATAAACCTATGAA+GGG | - | chr4_3:60408705-60408724 | Msa0652710:CDS | 30.0% | |
| AAACCTATGAAGGGTAAAAA+AGG | - | chr4_3:60408714-60408733 | Msa0652710:CDS | 30.0% | |
| !!! | TTACCTTTTTTACCCTTCAT+AGG | + | chr4_3:60408720-60408739 | None:intergenic | 30.0% |
| AAGGGTAAAAAAGGTAATAG+TGG | - | chr4_3:60408723-60408742 | Msa0652710:CDS | 30.0% | |
| ! | AAGTGTTAAATTTAGGGTTC+CGG | - | chr4_3:60408749-60408768 | Msa0652710:CDS | 30.0% |
| GATGAAGATGAAATGTTGAA+TGG | - | chr4_3:60408783-60408802 | Msa0652710:CDS | 30.0% | |
| TTTGAGGAATAAGAAAATGG+GGG | - | chr4_3:60409169-60409188 | Msa0652710:CDS | 30.0% | |
| GTTGAGAAAAAGAAAACAAG+GGG | - | chr4_3:60409332-60409351 | Msa0652710:CDS | 30.0% | |
| TGATGGAGATGATAAAGAAA+AGG | - | chr4_3:60409466-60409485 | Msa0652710:CDS | 30.0% | |
| TAAAGAGAAGGAGAAATTAC+CGG | - | chr4_3:60409526-60409545 | Msa0652710:CDS | 30.0% | |
| TGATGAAGAAGATAAAGAGA+AGG | - | chr4_3:60409610-60409629 | Msa0652710:CDS | 30.0% | |
| ! | AAATCACAAGAAAAGTGTGT+TGG | - | chr4_3:60409635-60409654 | Msa0652710:CDS | 30.0% |
| AAATTCATCTTCTCCAAATC+AGG | + | chr4_3:60409728-60409747 | None:intergenic | 30.0% | |
| GATTTGGAGAAGATGAATTT+AGG | - | chr4_3:60409728-60409747 | Msa0652710:CDS | 30.0% | |
| ! | GTTTCATCATGTATCTGTTT+TGG | + | chr4_3:60409785-60409804 | None:intergenic | 30.0% |
| AAATACCTGGATCTTTGATG+GGG | + | chr4_3:60408479-60408498 | None:intergenic | 35.0% | |
| GAAATACCTGGATCTTTGAT+GGG | + | chr4_3:60408480-60408499 | None:intergenic | 35.0% | |
| TGGAATTGAAATGGATAGTG+AGG | + | chr4_3:60408512-60408531 | None:intergenic | 35.0% | |
| ATCTGTGAGAATCCAATTAC+TGG | + | chr4_3:60408532-60408551 | None:intergenic | 35.0% | |
| ACAGATCTCGATTCTTCTAA+CGG | - | chr4_3:60408546-60408565 | Msa0652710:CDS | 35.0% | |
| !! | AACAGGTTTGGTGTCTAAAA+CGG | + | chr4_3:60408574-60408593 | None:intergenic | 35.0% |
| ATTGATGAAATTGACGAGGA+TGG | + | chr4_3:60408658-60408677 | None:intergenic | 35.0% | |
| TCTTCATCAATACTCTGTAC+CGG | + | chr4_3:60408771-60408790 | None:intergenic | 35.0% | |
| ! | TTGAATGGTGATGATGAATC+TGG | - | chr4_3:60408798-60408817 | Msa0652710:CDS | 35.0% |
| ! | TGATGATGAATCTGGAATTG+TGG | - | chr4_3:60408806-60408825 | Msa0652710:CDS | 35.0% |
| TGATTCTGCTGATGTGAATT+TGG | - | chr4_3:60408884-60408903 | Msa0652710:CDS | 35.0% | |
| ! | TGTAGTATCGAAGAATGTGA+GGG | - | chr4_3:60408911-60408930 | Msa0652710:CDS | 35.0% |
| TGCAGTTGAGATTTGTGATT+CGG | - | chr4_3:60408962-60408981 | Msa0652710:CDS | 35.0% | |
| TGGAAGAAGTGAAGAAGAAT+AGG | - | chr4_3:60409018-60409037 | Msa0652710:CDS | 35.0% | |
| AAGAAGTGAAGAAGAATAGG+AGG | - | chr4_3:60409021-60409040 | Msa0652710:CDS | 35.0% | |
| AGAAGTGAAGAAGAATAGGA+GGG | - | chr4_3:60409022-60409041 | Msa0652710:CDS | 35.0% | |
| GAATAAGAAGAATACGGTTG+AGG | - | chr4_3:60409061-60409080 | Msa0652710:CDS | 35.0% | |
| AGGTTTGTGATTCGAGTAAT+GGG | - | chr4_3:60409081-60409100 | Msa0652710:CDS | 35.0% | |
| AAGTGAAGAAGAAGAATGTG+AGG | - | chr4_3:60409135-60409154 | Msa0652710:CDS | 35.0% | |
| AGTGAAGAAGAAGAATGTGA+GGG | - | chr4_3:60409136-60409155 | Msa0652710:CDS | 35.0% | |
| !! | TGAATTGAGTGTTGGAGATT+TGG | - | chr4_3:60409196-60409215 | Msa0652710:CDS | 35.0% |
| ACAAGGAATGCGAAGAATAA+AGG | - | chr4_3:60409263-60409282 | Msa0652710:CDS | 35.0% | |
| CAAGGAATGCGAAGAATAAA+GGG | - | chr4_3:60409264-60409283 | Msa0652710:CDS | 35.0% | |
| AAGGAATGCGAAGAATAAAG+GGG | - | chr4_3:60409265-60409284 | Msa0652710:CDS | 35.0% | |
| AAATTGCAGGAAGAGATTGT+TGG | - | chr4_3:60409374-60409393 | Msa0652710:CDS | 35.0% | |
| ! | GAGAATTGTGATGATGCTAA+AGG | - | chr4_3:60409413-60409432 | Msa0652710:CDS | 35.0% |
| ! | TTGTGATGATGCTAAAGGAA+AGG | - | chr4_3:60409418-60409437 | Msa0652710:CDS | 35.0% |
| TGCTAAAGGAAAGGAGAAAT+TGG | - | chr4_3:60409427-60409446 | Msa0652710:CDS | 35.0% | |
| TAAAGGAAAGGAGAAATTGG+AGG | - | chr4_3:60409430-60409449 | Msa0652710:CDS | 35.0% | |
| TGATGGAGAAGATAAAGAGA+AGG | - | chr4_3:60409514-60409533 | Msa0652710:CDS | 35.0% | |
| ATTTGAATGGGGATGAGAAT+TGG | - | chr4_3:60409702-60409721 | Msa0652710:CDS | 35.0% | |
| AGAAGATGAATTTAGGTGAG+TGG | - | chr4_3:60409735-60409754 | Msa0652710:CDS | 35.0% | |
| ATGTATCAGAATCAGAAAGC+TGG | - | chr4_3:60409863-60409882 | Msa0652710:CDS | 35.0% | |
| AAATACCTGGATCTTTGATG+GGG | + | chr4_3:60408479-60408498 | None:intergenic | 35.0% | |
| GAAATACCTGGATCTTTGAT+GGG | + | chr4_3:60408480-60408499 | None:intergenic | 35.0% | |
| TGGAATTGAAATGGATAGTG+AGG | + | chr4_3:60408512-60408531 | None:intergenic | 35.0% | |
| ATCTGTGAGAATCCAATTAC+TGG | + | chr4_3:60408532-60408551 | None:intergenic | 35.0% | |
| ACAGATCTCGATTCTTCTAA+CGG | - | chr4_3:60408546-60408565 | Msa0652710:CDS | 35.0% | |
| !! | AACAGGTTTGGTGTCTAAAA+CGG | + | chr4_3:60408574-60408593 | None:intergenic | 35.0% |
| ATTGATGAAATTGACGAGGA+TGG | + | chr4_3:60408658-60408677 | None:intergenic | 35.0% | |
| TCTTCATCAATACTCTGTAC+CGG | + | chr4_3:60408771-60408790 | None:intergenic | 35.0% | |
| ! | TTGAATGGTGATGATGAATC+TGG | - | chr4_3:60408798-60408817 | Msa0652710:CDS | 35.0% |
| ! | TGATGATGAATCTGGAATTG+TGG | - | chr4_3:60408806-60408825 | Msa0652710:CDS | 35.0% |
| TGATTCTGCTGATGTGAATT+TGG | - | chr4_3:60408884-60408903 | Msa0652710:CDS | 35.0% | |
| ! | TGTAGTATCGAAGAATGTGA+GGG | - | chr4_3:60408911-60408930 | Msa0652710:CDS | 35.0% |
| TGCAGTTGAGATTTGTGATT+CGG | - | chr4_3:60408962-60408981 | Msa0652710:CDS | 35.0% | |
| TGGAAGAAGTGAAGAAGAAT+AGG | - | chr4_3:60409018-60409037 | Msa0652710:CDS | 35.0% | |
| AAGAAGTGAAGAAGAATAGG+AGG | - | chr4_3:60409021-60409040 | Msa0652710:CDS | 35.0% | |
| AGAAGTGAAGAAGAATAGGA+GGG | - | chr4_3:60409022-60409041 | Msa0652710:CDS | 35.0% | |
| GAATAAGAAGAATACGGTTG+AGG | - | chr4_3:60409061-60409080 | Msa0652710:CDS | 35.0% | |
| AGGTTTGTGATTCGAGTAAT+GGG | - | chr4_3:60409081-60409100 | Msa0652710:CDS | 35.0% | |
| AAGTGAAGAAGAAGAATGTG+AGG | - | chr4_3:60409135-60409154 | Msa0652710:CDS | 35.0% | |
| AGTGAAGAAGAAGAATGTGA+GGG | - | chr4_3:60409136-60409155 | Msa0652710:CDS | 35.0% | |
| !! | TGAATTGAGTGTTGGAGATT+TGG | - | chr4_3:60409196-60409215 | Msa0652710:CDS | 35.0% |
| ACAAGGAATGCGAAGAATAA+AGG | - | chr4_3:60409263-60409282 | Msa0652710:CDS | 35.0% | |
| CAAGGAATGCGAAGAATAAA+GGG | - | chr4_3:60409264-60409283 | Msa0652710:CDS | 35.0% | |
| AAGGAATGCGAAGAATAAAG+GGG | - | chr4_3:60409265-60409284 | Msa0652710:CDS | 35.0% | |
| AAATTGCAGGAAGAGATTGT+TGG | - | chr4_3:60409374-60409393 | Msa0652710:CDS | 35.0% | |
| ! | GAGAATTGTGATGATGCTAA+AGG | - | chr4_3:60409413-60409432 | Msa0652710:CDS | 35.0% |
| ! | TTGTGATGATGCTAAAGGAA+AGG | - | chr4_3:60409418-60409437 | Msa0652710:CDS | 35.0% |
| TGCTAAAGGAAAGGAGAAAT+TGG | - | chr4_3:60409427-60409446 | Msa0652710:CDS | 35.0% | |
| TAAAGGAAAGGAGAAATTGG+AGG | - | chr4_3:60409430-60409449 | Msa0652710:CDS | 35.0% | |
| TGATGGAGAAGATAAAGAGA+AGG | - | chr4_3:60409514-60409533 | Msa0652710:CDS | 35.0% | |
| ATTTGAATGGGGATGAGAAT+TGG | - | chr4_3:60409702-60409721 | Msa0652710:CDS | 35.0% | |
| AGAAGATGAATTTAGGTGAG+TGG | - | chr4_3:60409735-60409754 | Msa0652710:CDS | 35.0% | |
| ATGTATCAGAATCAGAAAGC+TGG | - | chr4_3:60409863-60409882 | Msa0652710:CDS | 35.0% | |
| AGGAATTGAAGTGTGAGAGA+TGG | + | chr4_3:60408372-60408391 | None:intergenic | 40.0% | |
| !!! | ACCGATTTTGATGGTGGATT+CGG | + | chr4_3:60408433-60408452 | None:intergenic | 40.0% |
| AATCCACCATCAAAATCGGT+CGG | - | chr4_3:60408433-60408452 | Msa0652710:CDS | 40.0% | |
| GGAAATACCTGGATCTTTGA+TGG | + | chr4_3:60408481-60408500 | None:intergenic | 40.0% | |
| ! | GAAATGGATAGTGAGGTGTT+TGG | + | chr4_3:60408505-60408524 | None:intergenic | 40.0% |
| !! | CTGAGATGAAAAGGGGTATT+CGG | + | chr4_3:60408600-60408619 | None:intergenic | 40.0% |
| AACCATCGCTGAGATGAAAA+GGG | + | chr4_3:60408608-60408627 | None:intergenic | 40.0% | |
| AGTAACTTCACCGATCTTGA+TGG | + | chr4_3:60408634-60408653 | None:intergenic | 40.0% | |
| CTTCTACTATCGTTTCCGTA+GGG | + | chr4_3:60408692-60408711 | None:intergenic | 40.0% | |
| TCTTCTACTATCGTTTCCGT+AGG | + | chr4_3:60408693-60408712 | None:intergenic | 40.0% | |
| GTATTCCTCGTAACCTTCAT+CGG | + | chr4_3:60408843-60408862 | None:intergenic | 40.0% | |
| ! | CTGTAGTATCGAAGAATGTG+AGG | - | chr4_3:60408910-60408929 | Msa0652710:CDS | 40.0% |
| GCAGTTGAGATTTGTGATTC+GGG | - | chr4_3:60408963-60408982 | Msa0652710:CDS | 40.0% | |
| ! | GAGATTTGTGATTCGGGTAA+TGG | - | chr4_3:60408969-60408988 | Msa0652710:CDS | 40.0% |
| ! | TGATTCGGGTAATGGTGATT+TGG | - | chr4_3:60408977-60408996 | Msa0652710:CDS | 40.0% |
| ! | TGGTGATTTGGATGATGTGA+AGG | - | chr4_3:60408989-60409008 | Msa0652710:CDS | 40.0% |
| TTTGGATGATGTGAAGGAGA+AGG | - | chr4_3:60408995-60409014 | Msa0652710:CDS | 40.0% | |
| GAGGTTTGTGATTCGAGTAA+TGG | - | chr4_3:60409080-60409099 | Msa0652710:CDS | 40.0% | |
| GGTTTGTGATTCGAGTAATG+GGG | - | chr4_3:60409082-60409101 | Msa0652710:CDS | 40.0% | |
| ! | TGATTCGAGTAATGGGGATT+TGG | - | chr4_3:60409088-60409107 | Msa0652710:CDS | 40.0% |
| GGAGATTGTGAAAGAGAAAG+TGG | - | chr4_3:60409109-60409128 | Msa0652710:CDS | 40.0% | |
| GATTGTGAAAGAGAAAGTGG+AGG | - | chr4_3:60409112-60409131 | Msa0652710:CDS | 40.0% | |
| !! | TTGAGTGTTGGAGATTTGGA+TGG | - | chr4_3:60409200-60409219 | Msa0652710:CDS | 40.0% |
| ! | GAAGATTTGAGCTTGGTGAA+TGG | - | chr4_3:60409299-60409318 | Msa0652710:CDS | 40.0% |
| GAGAAAAAGAAAACAAGGGG+TGG | - | chr4_3:60409335-60409354 | Msa0652710:CDS | 40.0% | |
| TAAGGGGAAGAAGAAATTGC+AGG | - | chr4_3:60409361-60409380 | Msa0652710:CDS | 40.0% | |
| ! | AAATTGGAGGAAGAGTGTGT+TGG | - | chr4_3:60409443-60409462 | Msa0652710:CDS | 40.0% |
| ! | AATTTACCAGAAGAGCGTGT+TGG | - | chr4_3:60409491-60409510 | Msa0652710:CDS | 40.0% |
| ! | CAAGAAAAGTGTGTTGGTGA+TGG | - | chr4_3:60409641-60409660 | Msa0652710:CDS | 40.0% |
| ! | AGGTGAGTGGTTTGATTTCT+TGG | - | chr4_3:60409748-60409767 | Msa0652710:CDS | 40.0% |
| GATACATTATGACGTACTCG+CGG | + | chr4_3:60409850-60409869 | None:intergenic | 40.0% | |
| AGGAATTGAAGTGTGAGAGA+TGG | + | chr4_3:60408372-60408391 | None:intergenic | 40.0% | |
| !!! | ACCGATTTTGATGGTGGATT+CGG | + | chr4_3:60408433-60408452 | None:intergenic | 40.0% |
| AATCCACCATCAAAATCGGT+CGG | - | chr4_3:60408433-60408452 | Msa0652710:CDS | 40.0% | |
| GGAAATACCTGGATCTTTGA+TGG | + | chr4_3:60408481-60408500 | None:intergenic | 40.0% | |
| ! | GAAATGGATAGTGAGGTGTT+TGG | + | chr4_3:60408505-60408524 | None:intergenic | 40.0% |
| !! | CTGAGATGAAAAGGGGTATT+CGG | + | chr4_3:60408600-60408619 | None:intergenic | 40.0% |
| AACCATCGCTGAGATGAAAA+GGG | + | chr4_3:60408608-60408627 | None:intergenic | 40.0% | |
| AGTAACTTCACCGATCTTGA+TGG | + | chr4_3:60408634-60408653 | None:intergenic | 40.0% | |
| CTTCTACTATCGTTTCCGTA+GGG | + | chr4_3:60408692-60408711 | None:intergenic | 40.0% | |
| TCTTCTACTATCGTTTCCGT+AGG | + | chr4_3:60408693-60408712 | None:intergenic | 40.0% | |
| GTATTCCTCGTAACCTTCAT+CGG | + | chr4_3:60408843-60408862 | None:intergenic | 40.0% | |
| ! | CTGTAGTATCGAAGAATGTG+AGG | - | chr4_3:60408910-60408929 | Msa0652710:CDS | 40.0% |
| GCAGTTGAGATTTGTGATTC+GGG | - | chr4_3:60408963-60408982 | Msa0652710:CDS | 40.0% | |
| ! | GAGATTTGTGATTCGGGTAA+TGG | - | chr4_3:60408969-60408988 | Msa0652710:CDS | 40.0% |
| ! | TGATTCGGGTAATGGTGATT+TGG | - | chr4_3:60408977-60408996 | Msa0652710:CDS | 40.0% |
| ! | TGGTGATTTGGATGATGTGA+AGG | - | chr4_3:60408989-60409008 | Msa0652710:CDS | 40.0% |
| TTTGGATGATGTGAAGGAGA+AGG | - | chr4_3:60408995-60409014 | Msa0652710:CDS | 40.0% | |
| GAGGTTTGTGATTCGAGTAA+TGG | - | chr4_3:60409080-60409099 | Msa0652710:CDS | 40.0% | |
| GGTTTGTGATTCGAGTAATG+GGG | - | chr4_3:60409082-60409101 | Msa0652710:CDS | 40.0% | |
| ! | TGATTCGAGTAATGGGGATT+TGG | - | chr4_3:60409088-60409107 | Msa0652710:CDS | 40.0% |
| GGAGATTGTGAAAGAGAAAG+TGG | - | chr4_3:60409109-60409128 | Msa0652710:CDS | 40.0% | |
| GATTGTGAAAGAGAAAGTGG+AGG | - | chr4_3:60409112-60409131 | Msa0652710:CDS | 40.0% | |
| !! | TTGAGTGTTGGAGATTTGGA+TGG | - | chr4_3:60409200-60409219 | Msa0652710:CDS | 40.0% |
| ! | GAAGATTTGAGCTTGGTGAA+TGG | - | chr4_3:60409299-60409318 | Msa0652710:CDS | 40.0% |
| GAGAAAAAGAAAACAAGGGG+TGG | - | chr4_3:60409335-60409354 | Msa0652710:CDS | 40.0% | |
| TAAGGGGAAGAAGAAATTGC+AGG | - | chr4_3:60409361-60409380 | Msa0652710:CDS | 40.0% | |
| ! | AAATTGGAGGAAGAGTGTGT+TGG | - | chr4_3:60409443-60409462 | Msa0652710:CDS | 40.0% |
| ! | AATTTACCAGAAGAGCGTGT+TGG | - | chr4_3:60409491-60409510 | Msa0652710:CDS | 40.0% |
| ! | CAAGAAAAGTGTGTTGGTGA+TGG | - | chr4_3:60409641-60409660 | Msa0652710:CDS | 40.0% |
| ! | AGGTGAGTGGTTTGATTTCT+TGG | - | chr4_3:60409748-60409767 | Msa0652710:CDS | 40.0% |
| GATACATTATGACGTACTCG+CGG | + | chr4_3:60409850-60409869 | None:intergenic | 40.0% | |
| ! | GGATTCGGGTTTGAATAGGT+GGG | + | chr4_3:60408418-60408437 | None:intergenic | 45.0% |
| ! | TGGATTCGGGTTTGAATAGG+TGG | + | chr4_3:60408419-60408438 | None:intergenic | 45.0% |
| !! | TGGTGGATTCGGGTTTGAAT+AGG | + | chr4_3:60408422-60408441 | None:intergenic | 45.0% |
| !!! | CCGATTTTGATGGTGGATTC+GGG | + | chr4_3:60408432-60408451 | None:intergenic | 45.0% |
| CCCGAATCCACCATCAAAAT+CGG | - | chr4_3:60408429-60408448 | Msa0652710:CDS | 45.0% | |
| ATCCACCATCAAAATCGGTC+GGG | - | chr4_3:60408434-60408453 | Msa0652710:CDS | 45.0% | |
| ! | AGGTGTTTGGTGGAAATACC+TGG | + | chr4_3:60408492-60408511 | None:intergenic | 45.0% |
| ! | ATGGATAGTGAGGTGTTTGG+TGG | + | chr4_3:60408502-60408521 | None:intergenic | 45.0% |
| !! | AGATGAAAAGGGGTATTCGG+AGG | + | chr4_3:60408597-60408616 | None:intergenic | 45.0% |
| ACCATCGCTGAGATGAAAAG+GGG | + | chr4_3:60408607-60408626 | None:intergenic | 45.0% | |
| GAACCATCGCTGAGATGAAA+AGG | + | chr4_3:60408609-60408628 | None:intergenic | 45.0% | |
| GATGGTTCCACCATCAAGAT+CGG | - | chr4_3:60408621-60408640 | Msa0652710:CDS | 45.0% | |
| AACTTCACCGATCTTGATGG+TGG | + | chr4_3:60408631-60408650 | None:intergenic | 45.0% | |
| GGGGATTGATGAAATTGACG+AGG | + | chr4_3:60408662-60408681 | None:intergenic | 45.0% | |
| CAATCCCCAAAGTAACCCTA+CGG | - | chr4_3:60408674-60408693 | Msa0652710:CDS | 45.0% | |
| ! | GTTTCCGTAGGGTTACTTTG+GGG | + | chr4_3:60408681-60408700 | None:intergenic | 45.0% |
| ! | CGTTTCCGTAGGGTTACTTT+GGG | + | chr4_3:60408682-60408701 | None:intergenic | 45.0% |
| TCGTTTCCGTAGGGTTACTT+TGG | + | chr4_3:60408683-60408702 | None:intergenic | 45.0% | |
| TGAAGGTTACGAGGAATACG+CGG | - | chr4_3:60408844-60408863 | Msa0652710:CDS | 45.0% | |
| AGAAGAATAGGAGGGTGACA+AGG | - | chr4_3:60409030-60409049 | Msa0652710:CDS | 45.0% | |
| AGAAGAATGTGAGGGTGACA+AGG | - | chr4_3:60409144-60409163 | Msa0652710:CDS | 45.0% | |
| TGAGGGTGACAAGGAATTTG+AGG | - | chr4_3:60409153-60409172 | Msa0652710:CDS | 45.0% | |
| GGGGTTTCTGAATTGAGTGT+TGG | - | chr4_3:60409188-60409207 | Msa0652710:CDS | 45.0% | |
| TGGAGATTTGGATGGTGTGA+AGG | - | chr4_3:60409208-60409227 | Msa0652710:CDS | 45.0% | |
| TTTGGATGGTGTGAAGGAGA+AGG | - | chr4_3:60409214-60409233 | Msa0652710:CDS | 45.0% | |
| TGCGAAGAATAAAGGGGTTG+TGG | - | chr4_3:60409271-60409290 | Msa0652710:CDS | 45.0% | |
| GAATAAAGGGGTTGTGGTTG+AGG | - | chr4_3:60409277-60409296 | Msa0652710:CDS | 45.0% | |
| GGTTGAGGAAGATTTGAGCT+TGG | - | chr4_3:60409292-60409311 | Msa0652710:CDS | 45.0% | |
| ! | TTTGAGCTTGGTGAATGGAG+TGG | - | chr4_3:60409304-60409323 | Msa0652710:CDS | 45.0% |
| ! | AAAACAAGGGGTGGTGCTAA+GGG | - | chr4_3:60409344-60409363 | Msa0652710:CDS | 45.0% |
| ! | CAGGAAGAGATTGTTGGTGA+TGG | - | chr4_3:60409380-60409399 | Msa0652710:CDS | 45.0% |
| !! | GAGATTGTTGGTGATGGAGA+TGG | - | chr4_3:60409386-60409405 | Msa0652710:CDS | 45.0% |
| ! | AAATTACCGGAAGAGTGCGT+TGG | - | chr4_3:60409539-60409558 | Msa0652710:CDS | 45.0% |
| !! | AAGTGTGTTGGTGATGGAGA+TGG | - | chr4_3:60409647-60409666 | Msa0652710:CDS | 45.0% |
| ! | GGATGAGAATTGGCCTGATT+TGG | - | chr4_3:60409712-60409731 | Msa0652710:CDS | 45.0% |
| ! | TCTCTCGGCTTTTTGTCTCA+TGG | + | chr4_3:60409825-60409844 | None:intergenic | 45.0% |
| ! | GGATTCGGGTTTGAATAGGT+GGG | + | chr4_3:60408418-60408437 | None:intergenic | 45.0% |
| ! | TGGATTCGGGTTTGAATAGG+TGG | + | chr4_3:60408419-60408438 | None:intergenic | 45.0% |
| !! | TGGTGGATTCGGGTTTGAAT+AGG | + | chr4_3:60408422-60408441 | None:intergenic | 45.0% |
| !!! | CCGATTTTGATGGTGGATTC+GGG | + | chr4_3:60408432-60408451 | None:intergenic | 45.0% |
| CCCGAATCCACCATCAAAAT+CGG | - | chr4_3:60408429-60408448 | Msa0652710:CDS | 45.0% | |
| ATCCACCATCAAAATCGGTC+GGG | - | chr4_3:60408434-60408453 | Msa0652710:CDS | 45.0% | |
| ! | AGGTGTTTGGTGGAAATACC+TGG | + | chr4_3:60408492-60408511 | None:intergenic | 45.0% |
| ! | ATGGATAGTGAGGTGTTTGG+TGG | + | chr4_3:60408502-60408521 | None:intergenic | 45.0% |
| !! | AGATGAAAAGGGGTATTCGG+AGG | + | chr4_3:60408597-60408616 | None:intergenic | 45.0% |
| ACCATCGCTGAGATGAAAAG+GGG | + | chr4_3:60408607-60408626 | None:intergenic | 45.0% | |
| GAACCATCGCTGAGATGAAA+AGG | + | chr4_3:60408609-60408628 | None:intergenic | 45.0% | |
| GATGGTTCCACCATCAAGAT+CGG | - | chr4_3:60408621-60408640 | Msa0652710:CDS | 45.0% | |
| AACTTCACCGATCTTGATGG+TGG | + | chr4_3:60408631-60408650 | None:intergenic | 45.0% | |
| GGGGATTGATGAAATTGACG+AGG | + | chr4_3:60408662-60408681 | None:intergenic | 45.0% | |
| CAATCCCCAAAGTAACCCTA+CGG | - | chr4_3:60408674-60408693 | Msa0652710:CDS | 45.0% | |
| ! | GTTTCCGTAGGGTTACTTTG+GGG | + | chr4_3:60408681-60408700 | None:intergenic | 45.0% |
| ! | CGTTTCCGTAGGGTTACTTT+GGG | + | chr4_3:60408682-60408701 | None:intergenic | 45.0% |
| TCGTTTCCGTAGGGTTACTT+TGG | + | chr4_3:60408683-60408702 | None:intergenic | 45.0% | |
| TGAAGGTTACGAGGAATACG+CGG | - | chr4_3:60408844-60408863 | Msa0652710:CDS | 45.0% | |
| AGAAGAATAGGAGGGTGACA+AGG | - | chr4_3:60409030-60409049 | Msa0652710:CDS | 45.0% | |
| AGAAGAATGTGAGGGTGACA+AGG | - | chr4_3:60409144-60409163 | Msa0652710:CDS | 45.0% | |
| TGAGGGTGACAAGGAATTTG+AGG | - | chr4_3:60409153-60409172 | Msa0652710:CDS | 45.0% | |
| GGGGTTTCTGAATTGAGTGT+TGG | - | chr4_3:60409188-60409207 | Msa0652710:CDS | 45.0% | |
| TGGAGATTTGGATGGTGTGA+AGG | - | chr4_3:60409208-60409227 | Msa0652710:CDS | 45.0% | |
| TTTGGATGGTGTGAAGGAGA+AGG | - | chr4_3:60409214-60409233 | Msa0652710:CDS | 45.0% | |
| TGCGAAGAATAAAGGGGTTG+TGG | - | chr4_3:60409271-60409290 | Msa0652710:CDS | 45.0% | |
| GAATAAAGGGGTTGTGGTTG+AGG | - | chr4_3:60409277-60409296 | Msa0652710:CDS | 45.0% | |
| GGTTGAGGAAGATTTGAGCT+TGG | - | chr4_3:60409292-60409311 | Msa0652710:CDS | 45.0% | |
| ! | TTTGAGCTTGGTGAATGGAG+TGG | - | chr4_3:60409304-60409323 | Msa0652710:CDS | 45.0% |
| ! | AAAACAAGGGGTGGTGCTAA+GGG | - | chr4_3:60409344-60409363 | Msa0652710:CDS | 45.0% |
| ! | CAGGAAGAGATTGTTGGTGA+TGG | - | chr4_3:60409380-60409399 | Msa0652710:CDS | 45.0% |
| !! | GAGATTGTTGGTGATGGAGA+TGG | - | chr4_3:60409386-60409405 | Msa0652710:CDS | 45.0% |
| ! | AAATTACCGGAAGAGTGCGT+TGG | - | chr4_3:60409539-60409558 | Msa0652710:CDS | 45.0% |
| !! | AAGTGTGTTGGTGATGGAGA+TGG | - | chr4_3:60409647-60409666 | Msa0652710:CDS | 45.0% |
| ! | GGATGAGAATTGGCCTGATT+TGG | - | chr4_3:60409712-60409731 | Msa0652710:CDS | 45.0% |
| ! | TCTCTCGGCTTTTTGTCTCA+TGG | + | chr4_3:60409825-60409844 | None:intergenic | 45.0% |
| CTCACACTTCAATTCCTCGC+CGG | - | chr4_3:60408375-60408394 | Msa0652710:CDS | 50.0% | |
| !! | GATGACCCGACCGATTTTGA+TGG | + | chr4_3:60408442-60408461 | None:intergenic | 50.0% |
| AACCTCCCCATCAAAGATCC+AGG | - | chr4_3:60408471-60408490 | Msa0652710:CDS | 50.0% | |
| TACCTGGATCTTTGATGGGG+AGG | + | chr4_3:60408476-60408495 | None:intergenic | 50.0% | |
| GGTATTCGGAGGAACAGGTT+TGG | + | chr4_3:60408586-60408605 | None:intergenic | 50.0% | |
| !! | AAAGGGGTATTCGGAGGAAC+AGG | + | chr4_3:60408591-60408610 | None:intergenic | 50.0% |
| ! | ACCCCTTTTCATCTCAGCGA+TGG | - | chr4_3:60408603-60408622 | Msa0652710:CDS | 50.0% |
| !! | CTCGTAACCTTCATCGGTTC+AGG | + | chr4_3:60408837-60408856 | None:intergenic | 50.0% |
| CTGAACCGATGAAGGTTACG+AGG | - | chr4_3:60408835-60408854 | Msa0652710:CDS | 50.0% | |
| GGATGATGTGAAGGAGAAGG+TGG | - | chr4_3:60408998-60409017 | Msa0652710:CDS | 50.0% | |
| CTTGTCATCCTCACACTCCT+CGG | + | chr4_3:60409248-60409267 | None:intergenic | 50.0% | |
| ! | GAAAACAAGGGGTGGTGCTA+AGG | - | chr4_3:60409343-60409362 | Msa0652710:CDS | 50.0% |
| ! | AAACAAGGGGTGGTGCTAAG+GGG | - | chr4_3:60409345-60409364 | Msa0652710:CDS | 50.0% |
| ! | GAGGAAGAGTGTGTTGGTGA+TGG | - | chr4_3:60409449-60409468 | Msa0652710:CDS | 50.0% |
| CTCACACTTCAATTCCTCGC+CGG | - | chr4_3:60408375-60408394 | Msa0652710:CDS | 50.0% | |
| !! | GATGACCCGACCGATTTTGA+TGG | + | chr4_3:60408442-60408461 | None:intergenic | 50.0% |
| AACCTCCCCATCAAAGATCC+AGG | - | chr4_3:60408471-60408490 | Msa0652710:CDS | 50.0% | |
| TACCTGGATCTTTGATGGGG+AGG | + | chr4_3:60408476-60408495 | None:intergenic | 50.0% | |
| GGTATTCGGAGGAACAGGTT+TGG | + | chr4_3:60408586-60408605 | None:intergenic | 50.0% | |
| !! | AAAGGGGTATTCGGAGGAAC+AGG | + | chr4_3:60408591-60408610 | None:intergenic | 50.0% |
| ! | ACCCCTTTTCATCTCAGCGA+TGG | - | chr4_3:60408603-60408622 | Msa0652710:CDS | 50.0% |
| !! | CTCGTAACCTTCATCGGTTC+AGG | + | chr4_3:60408837-60408856 | None:intergenic | 50.0% |
| CTGAACCGATGAAGGTTACG+AGG | - | chr4_3:60408835-60408854 | Msa0652710:CDS | 50.0% | |
| GGATGATGTGAAGGAGAAGG+TGG | - | chr4_3:60408998-60409017 | Msa0652710:CDS | 50.0% | |
| CTTGTCATCCTCACACTCCT+CGG | + | chr4_3:60409248-60409267 | None:intergenic | 50.0% | |
| ! | GAAAACAAGGGGTGGTGCTA+AGG | - | chr4_3:60409343-60409362 | Msa0652710:CDS | 50.0% |
| ! | AAACAAGGGGTGGTGCTAAG+GGG | - | chr4_3:60409345-60409364 | Msa0652710:CDS | 50.0% |
| ! | GAGGAAGAGTGTGTTGGTGA+TGG | - | chr4_3:60409449-60409468 | Msa0652710:CDS | 50.0% |
| GGTTTCTCCCTTACGTGGAC+CGG | + | chr4_3:60408397-60408416 | None:intergenic | 55.0% | |
| ! | AGGTGGGTTTCTCCCTTACG+TGG | + | chr4_3:60408402-60408421 | None:intergenic | 55.0% |
| !! | GACCCGACCGATTTTGATGG+TGG | + | chr4_3:60408439-60408458 | None:intergenic | 55.0% |
| AAAATCGGTCGGGTCATCCG+CGG | - | chr4_3:60408444-60408463 | Msa0652710:CDS | 55.0% | |
| GGATCGACCTGAACCGATGA+AGG | - | chr4_3:60408827-60408846 | Msa0652710:CDS | 55.0% | |
| TTACGAGGAATACGCGGAGC+AGG | - | chr4_3:60408850-60408869 | Msa0652710:CDS | 55.0% | |
| CGAAGAATGTGAGGGTGACG+AGG | - | chr4_3:60408919-60408938 | Msa0652710:CDS | 55.0% | |
| GGATGGTGTGAAGGAGAAGG+TGG | - | chr4_3:60409217-60409236 | Msa0652710:CDS | 55.0% | |
| TGGTGTGAAGGAGAAGGTGG+AGG | - | chr4_3:60409220-60409239 | Msa0652710:CDS | 55.0% | |
| ! | CGAGGAGTGTGAGGATGACA+AGG | - | chr4_3:60409246-60409265 | Msa0652710:CDS | 55.0% |
| CCATCACCAACACGCTCTTC+TGG | + | chr4_3:60409500-60409519 | None:intergenic | 55.0% | |
| ! | CCAGAAGAGCGTGTTGGTGA+TGG | - | chr4_3:60409497-60409516 | Msa0652710:CDS | 55.0% |
| TCGTCACCAACGCACTCTTC+CGG | + | chr4_3:60409548-60409567 | None:intergenic | 55.0% | |
| GGTTTCTCCCTTACGTGGAC+CGG | + | chr4_3:60408397-60408416 | None:intergenic | 55.0% | |
| ! | AGGTGGGTTTCTCCCTTACG+TGG | + | chr4_3:60408402-60408421 | None:intergenic | 55.0% |
| !! | GACCCGACCGATTTTGATGG+TGG | + | chr4_3:60408439-60408458 | None:intergenic | 55.0% |
| AAAATCGGTCGGGTCATCCG+CGG | - | chr4_3:60408444-60408463 | Msa0652710:CDS | 55.0% | |
| GGATCGACCTGAACCGATGA+AGG | - | chr4_3:60408827-60408846 | Msa0652710:CDS | 55.0% | |
| TTACGAGGAATACGCGGAGC+AGG | - | chr4_3:60408850-60408869 | Msa0652710:CDS | 55.0% | |
| CGAAGAATGTGAGGGTGACG+AGG | - | chr4_3:60408919-60408938 | Msa0652710:CDS | 55.0% | |
| GGATGGTGTGAAGGAGAAGG+TGG | - | chr4_3:60409217-60409236 | Msa0652710:CDS | 55.0% | |
| TGGTGTGAAGGAGAAGGTGG+AGG | - | chr4_3:60409220-60409239 | Msa0652710:CDS | 55.0% | |
| ! | CGAGGAGTGTGAGGATGACA+AGG | - | chr4_3:60409246-60409265 | Msa0652710:CDS | 55.0% |
| CCATCACCAACACGCTCTTC+TGG | + | chr4_3:60409500-60409519 | None:intergenic | 55.0% | |
| ! | CCAGAAGAGCGTGTTGGTGA+TGG | - | chr4_3:60409497-60409516 | Msa0652710:CDS | 55.0% |
| TCGTCACCAACGCACTCTTC+CGG | + | chr4_3:60409548-60409567 | None:intergenic | 55.0% | |
| ATTCCTCGCCGGTCCACGTA+AGG | - | chr4_3:60408386-60408405 | Msa0652710:CDS | 60.0% | |
| TTCCTCGCCGGTCCACGTAA+GGG | - | chr4_3:60408387-60408406 | Msa0652710:CDS | 60.0% | |
| TGATGGGGAGGTTGTTGCCG+CGG | + | chr4_3:60408464-60408483 | None:intergenic | 60.0% | |
| GACGTACTCGCGGAGTCTCT+CGG | + | chr4_3:60409840-60409859 | None:intergenic | 60.0% | |
| ATTCCTCGCCGGTCCACGTA+AGG | - | chr4_3:60408386-60408405 | Msa0652710:CDS | 60.0% | |
| TTCCTCGCCGGTCCACGTAA+GGG | - | chr4_3:60408387-60408406 | Msa0652710:CDS | 60.0% | |
| TGATGGGGAGGTTGTTGCCG+CGG | + | chr4_3:60408464-60408483 | None:intergenic | 60.0% | |
| GACGTACTCGCGGAGTCTCT+CGG | + | chr4_3:60409840-60409859 | None:intergenic | 60.0% | |
| AGGAGAAGGTGGAGGAGCCG+AGG | - | chr4_3:60409228-60409247 | Msa0652710:CDS | 65.0% | |
| ! | TGGAGGAGCCGAGGAGTGTG+AGG | - | chr4_3:60409237-60409256 | Msa0652710:CDS | 65.0% |
| AGGAGAAGGTGGAGGAGCCG+AGG | - | chr4_3:60409228-60409247 | Msa0652710:CDS | 65.0% | |
| ! | TGGAGGAGCCGAGGAGTGTG+AGG | - | chr4_3:60409237-60409256 | Msa0652710:CDS | 65.0% |
| CTCCCTTACGTGGACCGGCG+AGG | + | chr4_3:60408392-60408411 | None:intergenic | 70.0% | |
| CTCCCTTACGTGGACCGGCG+AGG | + | chr4_3:60408392-60408411 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 60408348 | 60409904 | 60408348 | ID=Msa0652710;Name=Msa0652710 |
| chr4_3 | mRNA | 60408348 | 60409904 | 60408348 | ID=Msa0652710-mRNA-1;Parent=Msa0652710;Name=Msa0652710-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|-1|0|1|-1|1|1|0|518 |
| chr4_3 | exon | 60408348 | 60409904 | 60408348 | ID=Msa0652710-mRNA-1:exon:16473;Parent=Msa0652710-mRNA-1 |
| chr4_3 | CDS | 60408348 | 60409904 | 60408348 | ID=Msa0652710-mRNA-1:cds;Parent=Msa0652710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
