Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143670 | XP_003609029.1 | 93.112 | 392 | 27 | 0 | 1 | 392 | 1 | 392 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143670 | G7JQV9 | 93.112 | 392 | 27 | 0 | 1 | 392 | 1 | 392 | 0.0 | 700 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003080 | Msa0143670 | 0.813947 | 1.977772e-51 | -8.615850e-47 |
| Msa0005020 | Msa0143670 | 0.818823 | 1.603104e-52 | -8.615850e-47 |
| Msa0015150 | Msa0143670 | 0.810274 | 1.250323e-50 | -8.615850e-47 |
| Msa0015570 | Msa0143670 | 0.807981 | 3.875548e-50 | -8.615850e-47 |
| Msa0016040 | Msa0143670 | 0.842718 | 2.178975e-58 | -8.615850e-47 |
| Msa0019930 | Msa0143670 | 0.837910 | 3.933267e-57 | -8.615850e-47 |
| Msa0020540 | Msa0143670 | 0.811459 | 6.928907e-51 | -8.615850e-47 |
| Msa0025160 | Msa0143670 | 0.850177 | 2.009857e-60 | -8.615850e-47 |
| Msa0025580 | Msa0143670 | 0.805748 | 1.149019e-49 | -8.615850e-47 |
| Msa0027280 | Msa0143670 | 0.829649 | 4.573470e-55 | -8.615850e-47 |
| Msa0029960 | Msa0143670 | 0.803255 | 3.804333e-49 | -8.615850e-47 |
| Msa0034210 | Msa0143670 | 0.802923 | 4.455229e-49 | -8.615850e-47 |
| Msa0034830 | Msa0143670 | 0.827474 | 1.533678e-54 | -8.615850e-47 |
| Msa0035140 | Msa0143670 | 0.839010 | 2.046207e-57 | -8.615850e-47 |
| Msa0037740 | Msa0143670 | 0.815181 | 1.054249e-51 | -8.615850e-47 |
| Msa0042640 | Msa0143670 | 0.865626 | 5.153555e-65 | -8.615850e-47 |
| Msa0048510 | Msa0143670 | 0.853788 | 1.894933e-61 | -8.615850e-47 |
| Msa0050660 | Msa0143670 | 0.816910 | 4.335241e-52 | -8.615850e-47 |
| Msa0050700 | Msa0143670 | 0.818753 | 1.663008e-52 | -8.615850e-47 |
| Msa0050790 | Msa0143670 | 0.817630 | 2.984292e-52 | -8.615850e-47 |
| Msa0053070 | Msa0143670 | 0.818702 | 1.707981e-52 | -8.615850e-47 |
| Msa0056180 | Msa0143670 | 0.813564 | 2.401158e-51 | -8.615850e-47 |
| Msa0062340 | Msa0143670 | 0.811045 | 8.521287e-51 | -8.615850e-47 |
| Msa0065020 | Msa0143670 | 0.805033 | 1.622387e-49 | -8.615850e-47 |
| Msa0067060 | Msa0143670 | 0.802753 | 4.831605e-49 | -8.615850e-47 |
| Msa0068150 | Msa0143670 | 0.838262 | 3.192167e-57 | -8.615850e-47 |
| Msa0071850 | Msa0143670 | 0.800586 | 1.344789e-48 | -8.615850e-47 |
| Msa0071860 | Msa0143670 | 0.806639 | 7.461580e-50 | -8.615850e-47 |
| Msa0072520 | Msa0143670 | 0.830598 | 2.683688e-55 | -8.615850e-47 |
| Msa0075530 | Msa0143670 | 0.831466 | 1.642853e-55 | -8.615850e-47 |
| Msa0077340 | Msa0143670 | 0.824686 | 7.055100e-54 | -8.615850e-47 |
| Msa0077560 | Msa0143670 | 0.876133 | 1.779513e-68 | -8.615850e-47 |
| Msa0081980 | Msa0143670 | 0.832170 | 1.101174e-55 | -8.615850e-47 |
| Msa0082020 | Msa0143670 | 0.823929 | 1.062899e-53 | -8.615850e-47 |
| Msa0091350 | Msa0143670 | 0.802059 | 6.713544e-49 | -8.615850e-47 |
| Msa0094780 | Msa0143670 | 0.841176 | 5.568843e-58 | -8.615850e-47 |
| Msa0094790 | Msa0143670 | 0.845246 | 4.577007e-59 | -8.615850e-47 |
| Msa0098410 | Msa0143670 | 0.807082 | 6.012278e-50 | -8.615850e-47 |
| Msa0108880 | Msa0143670 | 0.826135 | 3.202459e-54 | -8.615850e-47 |
| Msa0110200 | Msa0143670 | 0.801360 | 9.341413e-49 | -8.615850e-47 |
| Msa0115550 | Msa0143670 | 0.825667 | 4.136195e-54 | -8.615850e-47 |
| Msa0121330 | Msa0143670 | 0.830610 | 2.666204e-55 | -8.615850e-47 |
| Msa0122330 | Msa0143670 | 0.853737 | 1.960689e-61 | -8.615850e-47 |
| Msa0123070 | Msa0143670 | 0.853485 | 2.316223e-61 | -8.615850e-47 |
| Msa0125210 | Msa0143670 | 0.822149 | 2.764648e-53 | -8.615850e-47 |
| Msa0125360 | Msa0143670 | 0.836459 | 9.241440e-57 | -8.615850e-47 |
| Msa0125590 | Msa0143670 | 0.807695 | 4.458736e-50 | -8.615850e-47 |
| Msa0128460 | Msa0143670 | 0.804654 | 1.947127e-49 | -8.615850e-47 |
| Msa0140280 | Msa0143670 | 0.801734 | 7.831356e-49 | -8.615850e-47 |
| Msa0140380 | Msa0143670 | 0.854254 | 1.391289e-61 | -8.615850e-47 |
| Msa0141640 | Msa0143670 | 0.804225 | 2.392451e-49 | -8.615850e-47 |
| Msa0143670 | Msa0146650 | 0.816278 | 6.006352e-52 | -8.615850e-47 |
| Msa0143670 | Msa0146930 | 0.805640 | 1.210753e-49 | -8.615850e-47 |
| Msa0143670 | Msa0156050 | 0.800618 | 1.324705e-48 | -8.615850e-47 |
| Msa0143670 | Msa0159590 | 0.826689 | 2.363056e-54 | -8.615850e-47 |
| Msa0143670 | Msa0159620 | 0.815671 | 8.203617e-52 | -8.615850e-47 |
| Msa0143670 | Msa0161930 | 0.848729 | 5.089458e-60 | -8.615850e-47 |
| Msa0143670 | Msa0168050 | 0.818176 | 2.247350e-52 | -8.615850e-47 |
| Msa0143670 | Msa0172480 | 0.837765 | 4.284180e-57 | -8.615850e-47 |
| Msa0143670 | Msa0172510 | 0.802626 | 5.131478e-49 | -8.615850e-47 |
| Msa0143670 | Msa0174290 | 0.829526 | 4.900751e-55 | -8.615850e-47 |
| Msa0143670 | Msa0176060 | 0.812861 | 3.426531e-51 | -8.615850e-47 |
| Msa0143670 | Msa0181650 | 0.801201 | 1.007016e-48 | -8.615850e-47 |
| Msa0143670 | Msa0190110 | 0.805633 | 1.215075e-49 | -8.615850e-47 |
| Msa0143670 | Msa0190570 | 0.815891 | 7.326106e-52 | -8.615850e-47 |
| Msa0143670 | Msa0190730 | 0.832714 | 8.074549e-56 | -8.615850e-47 |
| Msa0143670 | Msa0194630 | 0.813821 | 2.107618e-51 | -8.615850e-47 |
| Msa0143670 | Msa0200050 | 0.838820 | 2.290623e-57 | -8.615850e-47 |
| Msa0143670 | Msa0204950 | 0.811013 | 8.658618e-51 | -8.615850e-47 |
| Msa0143670 | Msa0213030 | 0.829365 | 5.361229e-55 | -8.615850e-47 |
| Msa0143670 | Msa0225610 | 0.814485 | 1.504021e-51 | -8.615850e-47 |
| Msa0143670 | Msa0225860 | 0.809383 | 1.944716e-50 | -8.615850e-47 |
| Msa0143670 | Msa0230800 | 0.828269 | 9.873927e-55 | -8.615850e-47 |
| Msa0143670 | Msa0230870 | 0.823087 | 1.673239e-53 | -8.615850e-47 |
| Msa0143670 | Msa0232760 | 0.827882 | 1.223563e-54 | -8.615850e-47 |
| Msa0143670 | Msa0233020 | 0.835678 | 1.459201e-56 | -8.615850e-47 |
| Msa0143670 | Msa0233070 | 0.845336 | 4.328192e-59 | -8.615850e-47 |
| Msa0143670 | Msa0238900 | 0.837487 | 5.048586e-57 | -8.615850e-47 |
| Msa0143670 | Msa0249850 | 0.804758 | 1.851985e-49 | -8.615850e-47 |
| Msa0143670 | Msa0260510 | 0.823062 | 1.695481e-53 | -8.615850e-47 |
| Msa0143670 | Msa0269210 | 0.844789 | 6.080851e-59 | -8.615850e-47 |
| Msa0143670 | Msa0271880 | 0.807221 | 5.618312e-50 | -8.615850e-47 |
| Msa0143670 | Msa0272260 | 0.835160 | 1.972315e-56 | -8.615850e-47 |
| Msa0143670 | Msa0281470 | 0.805461 | 1.319953e-49 | -8.615850e-47 |
| Msa0143670 | Msa0298470 | 0.840766 | 7.135380e-58 | -8.615850e-47 |
| Msa0143670 | Msa0307270 | 0.802174 | 6.359156e-49 | -8.615850e-47 |
| Msa0143670 | Msa0310850 | 0.803960 | 2.716445e-49 | -8.615850e-47 |
| Msa0143670 | Msa0314870 | 0.815789 | 7.720405e-52 | -8.615850e-47 |
| Msa0143670 | Msa0340500 | 0.811414 | 7.086879e-51 | -8.615850e-47 |
| Msa0143670 | Msa0353950 | 0.809898 | 1.506673e-50 | -8.615850e-47 |
| Msa0143670 | Msa0361910 | 0.810025 | 1.414879e-50 | -8.615850e-47 |
| Msa0143670 | Msa0367150 | 0.857621 | 1.440805e-62 | -8.615850e-47 |
| Msa0143670 | Msa0367520 | 0.808842 | 2.539002e-50 | -8.615850e-47 |
| Msa0143670 | Msa0368860 | 0.814600 | 1.418710e-51 | -8.615850e-47 |
| Msa0143670 | Msa0371270 | 0.806032 | 1.001703e-49 | -8.615850e-47 |
| Msa0143670 | Msa0373500 | 0.831358 | 1.746704e-55 | -8.615850e-47 |
| Msa0143670 | Msa0380490 | 0.835838 | 1.329241e-56 | -8.615850e-47 |
| Msa0143670 | Msa0380670 | 0.804834 | 1.786208e-49 | -8.615850e-47 |
| Msa0143670 | Msa0381730 | 0.829681 | 4.494083e-55 | -8.615850e-47 |
| Msa0143670 | Msa0383000 | 0.853021 | 3.147258e-61 | -8.615850e-47 |
| Msa0143670 | Msa0405620 | 0.819085 | 1.397337e-52 | -8.615850e-47 |
| Msa0143670 | Msa0409830 | 0.825211 | 5.303243e-54 | -8.615850e-47 |
| Msa0143670 | Msa0414880 | 0.823693 | 1.207158e-53 | -8.615850e-47 |
| Msa0143670 | Msa0416160 | 0.822209 | 2.677287e-53 | -8.615850e-47 |
| Msa0143670 | Msa0419540 | 0.820912 | 5.338465e-53 | -8.615850e-47 |
| Msa0143670 | Msa0422050 | 0.805919 | 1.058069e-49 | -8.615850e-47 |
| Msa0143670 | Msa0430000 | 0.836445 | 9.321555e-57 | -8.615850e-47 |
| Msa0143670 | Msa0431200 | 0.827433 | 1.568472e-54 | -8.615850e-47 |
| Msa0143670 | Msa0432010 | 0.859495 | 3.975001e-63 | -8.615850e-47 |
| Msa0143670 | Msa0433150 | 0.854267 | 1.379655e-61 | -8.615850e-47 |
| Msa0143670 | Msa0433760 | 0.836606 | 8.478180e-57 | -8.615850e-47 |
| Msa0143670 | Msa0436910 | 0.804222 | 2.396344e-49 | -8.615850e-47 |
| Msa0143670 | Msa0447750 | 0.813759 | 2.175238e-51 | -8.615850e-47 |
| Msa0143670 | Msa0454560 | 0.814715 | 1.338022e-51 | -8.615850e-47 |
| Msa0143670 | Msa0456670 | 0.806030 | 1.002351e-49 | -8.615850e-47 |
| Msa0143670 | Msa0457570 | 0.811015 | 8.649123e-51 | -8.615850e-47 |
| Msa0143670 | Msa0459740 | 0.845089 | 5.048248e-59 | -8.615850e-47 |
| Msa0143670 | Msa0462780 | 0.825428 | 4.712324e-54 | -8.615850e-47 |
| Msa0143670 | Msa0466520 | 0.830022 | 3.711550e-55 | -8.615850e-47 |
| Msa0143670 | Msa0466880 | 0.804486 | 2.110642e-49 | -8.615850e-47 |
| Msa0143670 | Msa0468620 | 0.810089 | 1.370742e-50 | -8.615850e-47 |
| Msa0143670 | Msa0472950 | 0.802482 | 5.493523e-49 | -8.615850e-47 |
| Msa0143670 | Msa0476280 | 0.814332 | 1.626277e-51 | -8.615850e-47 |
| Msa0143670 | Msa0477630 | 0.822345 | 2.489726e-53 | -8.615850e-47 |
| Msa0143670 | Msa0481890 | 0.893179 | 7.997016e-75 | -8.615850e-47 |
| Msa0143670 | Msa0500570 | 0.841652 | 4.173935e-58 | -8.615850e-47 |
| Msa0143670 | Msa0502510 | 0.830135 | 3.482925e-55 | -8.615850e-47 |
| Msa0143670 | Msa0507020 | 0.806547 | 7.800012e-50 | -8.615850e-47 |
| Msa0143670 | Msa0513080 | 0.814068 | 1.859437e-51 | -8.615850e-47 |
| Msa0143670 | Msa0514020 | 0.800168 | 1.635649e-48 | -8.615850e-47 |
| Msa0143670 | Msa0514500 | 0.809798 | 1.583443e-50 | -8.615850e-47 |
| Msa0143670 | Msa0517250 | 0.800154 | 1.646055e-48 | -8.615850e-47 |
| Msa0143670 | Msa0520260 | 0.828931 | 6.831698e-55 | -8.615850e-47 |
| Msa0143670 | Msa0520870 | 0.845108 | 4.986802e-59 | -8.615850e-47 |
| Msa0143670 | Msa0521680 | 0.856476 | 3.135393e-62 | -8.615850e-47 |
| Msa0143670 | Msa0524520 | 0.832012 | 1.205267e-55 | -8.615850e-47 |
| Msa0143670 | Msa0528570 | 0.816358 | 5.763351e-52 | -8.615850e-47 |
| Msa0143670 | Msa0529030 | 0.837010 | 6.689195e-57 | -8.615850e-47 |
| Msa0143670 | Msa0531960 | 0.867507 | 1.300540e-65 | -8.615850e-47 |
| Msa0143670 | Msa0534720 | 0.807625 | 4.612391e-50 | -8.615850e-47 |
| Msa0143670 | Msa0567170 | 0.818671 | 1.735768e-52 | -8.615850e-47 |
| Msa0143670 | Msa0570010 | 0.816108 | 6.554653e-52 | -8.615850e-47 |
| Msa0143670 | Msa0579070 | -0.809094 | 2.242314e-50 | -8.615850e-47 |
| Msa0143670 | Msa0580200 | 0.810531 | 1.100764e-50 | -8.615850e-47 |
| Msa0143670 | Msa0580370 | 0.801207 | 1.003931e-48 | -8.615850e-47 |
| Msa0143670 | Msa0580810 | 0.991613 | 1.376373e-188 | -8.615850e-47 |
| Msa0143670 | Msa0588920 | 0.851873 | 6.681505e-61 | -8.615850e-47 |
| Msa0143670 | Msa0590200 | 0.819961 | 8.822753e-53 | -8.615850e-47 |
| Msa0143670 | Msa0607800 | 0.829085 | 6.269765e-55 | -8.615850e-47 |
| Msa0143670 | Msa0621710 | 0.866474 | 2.776792e-65 | -8.615850e-47 |
| Msa0143670 | Msa0624900 | 0.814783 | 1.292500e-51 | -8.615850e-47 |
| Msa0143670 | Msa0625620 | 0.806437 | 8.230602e-50 | -8.615850e-47 |
| Msa0143670 | Msa0641990 | 0.806338 | 8.633361e-50 | -8.615850e-47 |
| Msa0143670 | Msa0648040 | 0.811453 | 6.950020e-51 | -8.615850e-47 |
| Msa0143670 | Msa0652710 | 0.803515 | 3.360416e-49 | -8.615850e-47 |
| Msa0143670 | Msa0657700 | 0.854387 | 1.273287e-61 | -8.615850e-47 |
| Msa0143670 | Msa0658640 | 0.806412 | 8.330021e-50 | -8.615850e-47 |
| Msa0143670 | Msa0662820 | 0.816947 | 4.251996e-52 | -8.615850e-47 |
| Msa0143670 | Msa0666700 | 0.869021 | 4.229490e-66 | -8.615850e-47 |
| Msa0143670 | Msa0668900 | 0.824773 | 6.731593e-54 | -8.615850e-47 |
| Msa0143670 | Msa0670100 | 0.823445 | 1.380040e-53 | -8.615850e-47 |
| Msa0143670 | Msa0682770 | 0.806646 | 7.434327e-50 | -8.615850e-47 |
| Msa0143670 | Msa0687090 | 0.808857 | 2.520316e-50 | -8.615850e-47 |
| Msa0143670 | Msa0690740 | 0.808957 | 2.399097e-50 | -8.615850e-47 |
| Msa0143670 | Msa0693340 | -0.803239 | 3.832495e-49 | -8.615850e-47 |
| Msa0143670 | Msa0702810 | 0.866931 | 1.987449e-65 | -8.615850e-47 |
| Msa0143670 | Msa0703600 | 0.803562 | 3.285105e-49 | -8.615850e-47 |
| Msa0143670 | Msa0706150 | 0.805401 | 1.359003e-49 | -8.615850e-47 |
| Msa0143670 | Msa0709200 | 0.803270 | 3.777062e-49 | -8.615850e-47 |
| Msa0143670 | Msa0709440 | 0.892627 | 1.333348e-74 | -8.615850e-47 |
| Msa0143670 | Msa0709630 | 0.818023 | 2.433406e-52 | -8.615850e-47 |
| Msa0143670 | Msa0714520 | 0.837792 | 4.216108e-57 | -8.615850e-47 |
| Msa0143670 | Msa0714790 | 0.810229 | 1.278512e-50 | -8.615850e-47 |
| Msa0143670 | Msa0716480 | 0.839721 | 1.337878e-57 | -8.615850e-47 |
| Msa0143670 | Msa0720410 | 0.803646 | 3.156524e-49 | -8.615850e-47 |
| Msa0143670 | Msa0722220 | 0.802274 | 6.062870e-49 | -8.615850e-47 |
| Msa0143670 | Msa0725750 | 0.806046 | 9.949294e-50 | -8.615850e-47 |
| Msa0143670 | Msa0734250 | 0.800823 | 1.202778e-48 | -8.615850e-47 |
| Msa0143670 | Msa0735780 | 0.834211 | 3.417248e-56 | -8.615850e-47 |
| Msa0143670 | Msa0737990 | 0.812829 | 3.482306e-51 | -8.615850e-47 |
| Msa0143670 | Msa0738700 | 0.826498 | 2.625360e-54 | -8.615850e-47 |
| Msa0143670 | Msa0740710 | 0.836279 | 1.026888e-56 | -8.615850e-47 |
| Msa0143670 | Msa0743440 | 0.819151 | 1.350161e-52 | -8.615850e-47 |
| Msa0143670 | Msa0745140 | 0.802642 | 5.091574e-49 | -8.615850e-47 |
| Msa0143670 | Msa0745720 | 0.820857 | 5.496045e-53 | -8.615850e-47 |
| Msa0143670 | Msa0747740 | 0.821638 | 3.629737e-53 | -8.615850e-47 |
| Msa0143670 | Msa0754430 | 0.829135 | 6.098904e-55 | -8.615850e-47 |
| Msa0143670 | Msa0754450 | 0.837103 | 6.331545e-57 | -8.615850e-47 |
| Msa0143670 | Msa0755760 | 0.821344 | 4.244115e-53 | -8.615850e-47 |
| Msa0143670 | Msa0756820 | 0.801511 | 8.699836e-49 | -8.615850e-47 |
| Msa0143670 | Msa0758650 | 0.823966 | 1.041719e-53 | -8.615850e-47 |
| Msa0143670 | Msa0760970 | 0.814667 | 1.370915e-51 | -8.615850e-47 |
| Msa0143670 | Msa0761670 | 0.834356 | 3.142836e-56 | -8.615850e-47 |
| Msa0143670 | Msa0773630 | 0.849581 | 2.949827e-60 | -8.615850e-47 |
| Msa0143670 | Msa0776640 | 0.804034 | 2.622292e-49 | -8.615850e-47 |
| Msa0143670 | Msa0778600 | 0.806096 | 9.712441e-50 | -8.615850e-47 |
| Msa0143670 | Msa0780910 | 0.843994 | 9.950525e-59 | -8.615850e-47 |
| Msa0143670 | Msa0805680 | 0.816762 | 4.678402e-52 | -8.615850e-47 |
| Msa0143670 | Msa0811020 | 0.836477 | 9.148088e-57 | -8.615850e-47 |
| Msa0143670 | Msa0815970 | 0.814480 | 1.508239e-51 | -8.615850e-47 |
| Msa0143670 | Msa0818880 | 0.821768 | 3.387915e-53 | -8.615850e-47 |
| Msa0143670 | Msa0821160 | 0.841898 | 3.594650e-58 | -8.615850e-47 |
| Msa0143670 | Msa0824450 | 0.819403 | 1.182696e-52 | -8.615850e-47 |
| Msa0143670 | Msa0828970 | 0.876290 | 1.570896e-68 | -8.615850e-47 |
| Msa0143670 | Msa0833650 | 0.802178 | 6.346553e-49 | -8.615850e-47 |
| Msa0143670 | Msa0835900 | 0.804505 | 2.091608e-49 | -8.615850e-47 |
| Msa0143670 | Msa0837460 | 0.841254 | 5.312635e-58 | -8.615850e-47 |
| Msa0143670 | Msa0841590 | 0.813509 | 2.469145e-51 | -8.615850e-47 |
| Msa0143670 | Msa0842070 | 0.801499 | 8.748756e-49 | -8.615850e-47 |
| Msa0143670 | Msa0859290 | 0.835184 | 1.945188e-56 | -8.615850e-47 |
| Msa0143670 | Msa0863620 | 0.847725 | 9.639387e-60 | -8.615850e-47 |
| Msa0143670 | Msa0865420 | 0.819714 | 1.004589e-52 | -8.615850e-47 |
| Msa0143670 | Msa0866530 | 0.822256 | 2.611134e-53 | -8.615850e-47 |
| Msa0143670 | Msa0867110 | 0.818926 | 1.519114e-52 | -8.615850e-47 |
| Msa0143670 | Msa0878280 | 0.822516 | 2.272564e-53 | -8.615850e-47 |
| Msa0143670 | Msa0879920 | 0.813963 | 1.961496e-51 | -8.615850e-47 |
| Msa0143670 | Msa0888790 | 0.816905 | 4.344416e-52 | -8.615850e-47 |
| Msa0143670 | Msa0900760 | 0.862347 | 5.405000e-64 | -8.615850e-47 |
| Msa0143670 | Msa0909760 | 0.849157 | 3.872624e-60 | -8.615850e-47 |
| Msa0143670 | Msa0915520 | 0.825449 | 4.658307e-54 | -8.615850e-47 |
| Msa0143670 | Msa0931590 | 0.858468 | 8.067912e-63 | -8.615850e-47 |
| Msa0143670 | Msa0997920 | 0.821463 | 3.985182e-53 | -8.615850e-47 |
| Msa0143670 | Msa1002640 | 0.839950 | 1.166217e-57 | -8.615850e-47 |
| Msa0143670 | Msa1033920 | 0.803615 | 3.203624e-49 | -8.615850e-47 |
| Msa0143670 | Msa1042160 | 0.826100 | 3.264192e-54 | -8.615850e-47 |
| Msa0143670 | Msa1042190 | 0.830759 | 2.450749e-55 | -8.615850e-47 |
| Msa0143670 | Msa1042880 | 0.825470 | 4.605223e-54 | -8.615850e-47 |
| Msa0143670 | Msa1051420 | 0.814071 | 1.856727e-51 | -8.615850e-47 |
| Msa0143670 | Msa1059020 | 0.824173 | 9.318616e-54 | -8.615850e-47 |
| Msa0143670 | Msa1072940 | 0.817304 | 3.535098e-52 | -8.615850e-47 |
| Msa0143670 | Msa1074600 | 0.802809 | 4.703657e-49 | -8.615850e-47 |
| Msa0143670 | Msa1078820 | 0.809557 | 1.784059e-50 | -8.615850e-47 |
| Msa0143670 | Msa1082200 | 0.835774 | 1.379255e-56 | -8.615850e-47 |
| Msa0143670 | Msa1084530 | 0.888552 | 5.336805e-73 | -8.615850e-47 |
| Msa0143670 | Msa1114630 | 0.806715 | 7.189452e-50 | -8.615850e-47 |
| Msa0143670 | Msa1116190 | 0.808398 | 3.158832e-50 | -8.615850e-47 |
| Msa0143670 | Msa1116660 | 0.813827 | 2.101666e-51 | -8.615850e-47 |
| Msa0143670 | Msa1123970 | 0.812544 | 4.018809e-51 | -8.615850e-47 |
| Msa0143670 | Msa1125820 | 0.893298 | 7.156725e-75 | -8.615850e-47 |
| Msa0143670 | Msa1125990 | 0.893742 | 4.732618e-75 | -8.615850e-47 |
| Msa0143670 | Msa1127470 | 0.818073 | 2.370982e-52 | -8.615850e-47 |
| Msa0143670 | Msa1132530 | 0.813000 | 3.193097e-51 | -8.615850e-47 |
| Msa0143670 | Msa1154100 | 0.817891 | 2.606412e-52 | -8.615850e-47 |
| Msa0143670 | Msa1159590 | 0.803375 | 3.592188e-49 | -8.615850e-47 |
| Msa0143670 | Msa1160790 | 0.803050 | 4.193571e-49 | -8.615850e-47 |
| Msa0143670 | Msa1160920 | 0.817503 | 3.188776e-52 | -8.615850e-47 |
| Msa0143670 | Msa1162230 | 0.813262 | 2.797425e-51 | -8.615850e-47 |
| Msa0143670 | Msa1162880 | 0.822027 | 2.949754e-53 | -8.615850e-47 |
| Msa0143670 | Msa1167470 | 0.818106 | 2.330592e-52 | -8.615850e-47 |
| Msa0143670 | Msa1169650 | 0.809000 | 2.348936e-50 | -8.615850e-47 |
| Msa0143670 | Msa1171290 | 0.889185 | 3.037694e-73 | -8.615850e-47 |
| Msa0143670 | Msa1175990 | 0.816701 | 4.827993e-52 | -8.615850e-47 |
| Msa0143670 | Msa1188790 | 0.827520 | 1.494939e-54 | -8.615850e-47 |
| Msa0143670 | Msa1192560 | 0.836611 | 8.456677e-57 | -8.615850e-47 |
| Msa0143670 | Msa1192570 | 0.846433 | 2.179119e-59 | -8.615850e-47 |
| Msa0143670 | Msa1192590 | 0.835949 | 1.245842e-56 | -8.615850e-47 |
| Msa0143670 | Msa1194240 | 0.813174 | 2.924643e-51 | -8.615850e-47 |
| Msa0143670 | Msa1208950 | 0.831899 | 1.285228e-55 | -8.615850e-47 |
| Msa0143670 | Msa1211640 | 0.895960 | 5.830146e-76 | -8.615850e-47 |
| Msa0143670 | Msa1214350 | 0.818238 | 2.175173e-52 | -8.615850e-47 |
| Msa0143670 | Msa1217230 | 0.809991 | 1.438839e-50 | -8.615850e-47 |
| Msa0143670 | Msa1218820 | 0.844737 | 6.282593e-59 | -8.615850e-47 |
| Msa0143670 | Msa1226520 | 0.806251 | 9.005757e-50 | -8.615850e-47 |
| Msa0143670 | Msa1228580 | 0.821120 | 4.779447e-53 | -8.615850e-47 |
| Msa0143670 | Msa1228630 | 0.818449 | 1.948498e-52 | -8.615850e-47 |
| Msa0143670 | Msa1244240 | 0.812349 | 4.434041e-51 | -8.615850e-47 |
| Msa0143670 | Msa1254540 | 0.853733 | 1.966267e-61 | -8.615850e-47 |
| Msa0143670 | Msa1261050 | 0.816948 | 4.250017e-52 | -8.615850e-47 |
| Msa0143670 | Msa1263740 | 0.832143 | 1.118404e-55 | -8.615850e-47 |
| Msa0143670 | Msa1263780 | 0.854262 | 1.383915e-61 | -8.615850e-47 |
| Msa0143670 | Msa1263900 | 0.803604 | 3.220261e-49 | -8.615850e-47 |
| Msa0143670 | Msa1294460 | 0.807907 | 4.017902e-50 | -8.615850e-47 |
| Msa0143670 | Msa1300460 | 0.838604 | 2.605184e-57 | -8.615850e-47 |
| Msa0143670 | Msa1301700 | 0.800141 | 1.656073e-48 | -8.615850e-47 |
| Msa0143670 | Msa1303650 | 0.803567 | 3.277559e-49 | -8.615850e-47 |
| Msa0143670 | Msa1305920 | 0.804651 | 1.950582e-49 | -8.615850e-47 |
| Msa0143670 | Msa1308850 | 0.824331 | 8.553659e-54 | -8.615850e-47 |
| Msa0143670 | Msa1327800 | 0.803675 | 3.112842e-49 | -8.615850e-47 |
| Msa0143670 | Msa1332950 | 0.828530 | 8.541030e-55 | -8.615850e-47 |
| Msa0143670 | Msa1338210 | 0.833694 | 4.602224e-56 | -8.615850e-47 |
| Msa0143670 | Msa1343170 | 0.827561 | 1.461580e-54 | -8.615850e-47 |
| Msa0143670 | Msa1343180 | 0.831157 | 1.957484e-55 | -8.615850e-47 |
| Msa0143670 | Msa1362130 | 0.820691 | 6.000753e-53 | -8.615850e-47 |
| Msa0143670 | Msa1364410 | 0.837562 | 4.832359e-57 | -8.615850e-47 |
| Msa0143670 | Msa1366150 | 0.836685 | 8.096033e-57 | -8.615850e-47 |
| Msa0143670 | Msa1367180 | 0.806292 | 8.830939e-50 | -8.615850e-47 |
| Msa0143670 | Msa1368750 | 0.857177 | 1.948955e-62 | -8.615850e-47 |
| Msa0143670 | Msa1374790 | 0.856912 | 2.333825e-62 | -8.615850e-47 |
| Msa0143670 | Msa1380120 | 0.843795 | 1.124946e-58 | -8.615850e-47 |
| Msa0143670 | Msa1381470 | 0.855140 | 7.705556e-62 | -8.615850e-47 |
| Msa0143670 | Msa1383310 | 0.833411 | 5.415769e-56 | -8.615850e-47 |
| Msa0143670 | Msa1384150 | 0.847685 | 9.890952e-60 | -8.615850e-47 |
| Msa0143670 | Msa1387440 | 0.848493 | 5.918566e-60 | -8.615850e-47 |
| Msa0143670 | Msa1387500 | 0.815645 | 8.314288e-52 | -8.615850e-47 |
| Msa0143670 | Msa1393780 | 0.801441 | 8.990540e-49 | -8.615850e-47 |
| Msa0143670 | Msa1397270 | 0.810396 | 1.177129e-50 | -8.615850e-47 |
| Msa0143670 | Msa1397400 | 0.814620 | 1.404145e-51 | -8.615850e-47 |
| Msa0143670 | Msa1399190 | 0.806786 | 6.946302e-50 | -8.615850e-47 |
| Msa0143670 | Msa1405460 | 0.834896 | 2.298420e-56 | -8.615850e-47 |
| Msa0143670 | Msa1406720 | 0.844656 | 6.604809e-59 | -8.615850e-47 |
| Msa0143670 | Msa1409410 | 0.852239 | 5.258784e-61 | -8.615850e-47 |
| Msa0143670 | Msa1414170 | 0.812204 | 4.769470e-51 | -8.615850e-47 |
| Msa0143670 | Msa1415540 | 0.820630 | 6.195504e-53 | -8.615850e-47 |
| Msa0143670 | Msa1420950 | 0.809260 | 2.065874e-50 | -8.615850e-47 |
| Msa0143670 | Msa1429070 | 0.833664 | 4.683877e-56 | -8.615850e-47 |
| Msa0143670 | Msa1437930 | 0.815296 | 9.943312e-52 | -8.615850e-47 |
| Msa0143670 | Msa1440630 | 0.819248 | 1.283175e-52 | -8.615850e-47 |
| Msa0143670 | Msa1441960 | 0.838950 | 2.119901e-57 | -8.615850e-47 |
| Msa0143670 | Msa1447170 | 0.819589 | 1.072612e-52 | -8.615850e-47 |
| Msa0143670 | Msa1450190 | 0.860861 | 1.537100e-63 | -8.615850e-47 |
| Msa0143670 | Msa1451820 | 0.856269 | 3.606145e-62 | -8.615850e-47 |
| Msa0143670 | Msa1452140 | 0.800637 | 1.312771e-48 | -8.615850e-47 |
| Msa0143670 | Msa1454010 | 0.807997 | 3.845249e-50 | -8.615850e-47 |
| Msa0143670 | Msa1465360 | 0.805989 | 1.022885e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143670 | MtrunA17_Chr4g0060361 | 93.112 | 392 | 27 | 0 | 1 | 392 | 1 | 392 | 0.0 | 700 |
| Msa0143670 | MtrunA17_Chr4g0029591 | 49.180 | 61 | 31 | 0 | 130 | 190 | 159 | 219 | 8.53e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0143670 | AT5G62550.1 | 46.275 | 255 | 112 | 9 | 1 | 242 | 5 | 247 | 1.32e-43 | 158 |
Find 83 sgRNAs with CRISPR-Local
Find 158 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATCCTCTGTTGATGTTTC+TGG | 0.141767 | 1_4:-2661071 | Msa0143670:intron |
| TACTTTATACTCTATATATT+TGG | 0.173245 | 1_4:-2658376 | Msa0143670:three_prime_UTR |
| TCAGCTCGTCTTGTAATTTC+TGG | 0.205275 | 1_4:+2659371 | None:intergenic |
| TTTCTTGACCCCACTCTTAT+TGG | 0.213637 | 1_4:+2658856 | None:intergenic |
| CTTGATCTTGTCTCAGAGAT+TGG | 0.260994 | 1_4:+2659904 | None:intergenic |
| AGTGGATATCTTTGAAGTTT+TGG | 0.266285 | 1_4:+2660933 | None:intergenic |
| GACGAACGAGTTTCCTCTTC+TGG | 0.269058 | 1_4:+2659220 | None:intergenic |
| TGCATCTGGCTTCTGTTCCT+TGG | 0.298826 | 1_4:+2660893 | None:intergenic |
| TTGATCTTGTCTCAGAGATT+GGG | 0.302498 | 1_4:+2659905 | None:intergenic |
| AAGAGTGGGGTCAAGAAATA+TGG | 0.315516 | 1_4:-2658851 | Msa0143670:CDS |
| ACAGGATTAGAGAGCCTTCT+TGG | 0.325025 | 1_4:+2659973 | None:intergenic |
| GCAATTTCAAAATCTGCTTC+TGG | 0.340732 | 1_4:-2658935 | Msa0143670:CDS |
| TCTTCTTGTATTGAATGTTA+TGG | 0.347529 | 1_4:-2658414 | Msa0143670:three_prime_UTR |
| AGAGACCGGCGTTCGGGTTC+TGG | 0.355366 | 1_4:+2659852 | None:intergenic |
| GGCGACTCTATGGCTTTAAC+AGG | 0.355728 | 1_4:+2659103 | None:intergenic |
| AACCATAGAGTCACCCAAAA+AGG | 0.356976 | 1_4:-2659017 | Msa0143670:CDS |
| AATCTCAGAGACCGGCGTTC+GGG | 0.362228 | 1_4:+2659846 | None:intergenic |
| AGCCATAGAGTCGCCCAAAA+AGG | 0.383256 | 1_4:-2659095 | Msa0143670:CDS |
| AAATCTCAGAGACCGGCGTT+CGG | 0.394436 | 1_4:+2659845 | None:intergenic |
| GTTATGTTGCCAACCGCCTT+TGG | 0.396563 | 1_4:+2659928 | None:intergenic |
| TGTCATTCTGAAACTTTGTT+TGG | 0.399717 | 1_4:-2658503 | Msa0143670:three_prime_UTR |
| TGAGAAGCATTGGTGCTAAC+AGG | 0.401430 | 1_4:+2660870 | None:intergenic |
| TTATTGGTTTCAAGCTTGCT+TGG | 0.407131 | 1_4:+2658872 | None:intergenic |
| AGAGAAACTAATTCCAAAGT+TGG | 0.410613 | 1_4:+2661124 | None:intergenic |
| TCTTGTCTTCAGCTTCATAT+TGG | 0.418460 | 1_4:-2659792 | Msa0143670:CDS |
| GGGTTCTGGTTTGAGGCTCT+TGG | 0.425515 | 1_4:+2659866 | None:intergenic |
| TTGGTGCTAACAGGTGCATC+TGG | 0.433704 | 1_4:+2660879 | None:intergenic |
| GAGACAAGATCAAGGAGGTC+TGG | 0.434478 | 1_4:-2659895 | Msa0143670:CDS |
| TGGATTCTTCAAACTAGCCT+TGG | 0.435742 | 1_4:-2659719 | Msa0143670:CDS |
| TTGCCAACCGCCTTTGGACT+CGG | 0.440988 | 1_4:+2659934 | None:intergenic |
| GTAGGTGCCCTTGATTTCTC+TGG | 0.448973 | 1_4:-2660024 | Msa0143670:CDS |
| GGCGTTCGGGTTCTGGTTTG+AGG | 0.450929 | 1_4:+2659859 | None:intergenic |
| TCAAAGATATCCACTGCGTT+CGG | 0.452607 | 1_4:-2660925 | Msa0143670:CDS |
| AGAGGCAGTGTTTAAGCACT+TGG | 0.461037 | 1_4:+2659141 | None:intergenic |
| CCTCTTAGATTGAGAAGCAT+TGG | 0.480180 | 1_4:+2660860 | None:intergenic |
| TTCAAACTAGCCTTGGAGGC+AGG | 0.481991 | 1_4:-2659712 | Msa0143670:CDS |
| TGTCCTTGCCAGAGAAATCA+AGG | 0.493273 | 1_4:+2660016 | None:intergenic |
| GAGGCAGTGTTTAAGCACTT+GGG | 0.497338 | 1_4:+2659142 | None:intergenic |
| CTGGTAGTTTGAACCGTAGT+AGG | 0.501816 | 1_4:-2658916 | Msa0143670:CDS |
| ATTCTTCAAACTAGCCTTGG+AGG | 0.505138 | 1_4:-2659716 | Msa0143670:CDS |
| CCAATGCTTCTCAATCTAAG+AGG | 0.511758 | 1_4:-2660860 | Msa0143670:intron |
| CTCGTCTTGTAATTTCTGGA+AGG | 0.512731 | 1_4:+2659375 | None:intergenic |
| TGATCTTGTCTCAGAGATTG+GGG | 0.514449 | 1_4:+2659906 | None:intergenic |
| AATCAAGGGCACCTACACTT+TGG | 0.520785 | 1_4:+2660031 | None:intergenic |
| TGCCCTTGATTTCTCTGGCA+AGG | 0.521077 | 1_4:-2660019 | Msa0143670:CDS |
| TACCTCACATCCTGCCTCCA+AGG | 0.524168 | 1_4:+2659702 | None:intergenic |
| TCTATTCAAGTCACTTCTCC+TGG | 0.527263 | 1_4:-2659043 | Msa0143670:CDS |
| AGGAGAAGTGACTTGAATAG+AGG | 0.535527 | 1_4:+2659045 | None:intergenic |
| TCGTCTTGTAATTTCTGGAA+GGG | 0.535594 | 1_4:+2659376 | None:intergenic |
| AGGAGAAATGACTTGAATAG+AGG | 0.536982 | 1_4:+2659123 | None:intergenic |
| GGAGTTGTAGATGATTTGAC+AGG | 0.537947 | 1_4:+2659955 | None:intergenic |
| ACTTCTTCTACCATGGCTAC+TGG | 0.540510 | 1_4:-2659175 | Msa0143670:CDS |
| CTTCAGCACTTCTTCTACCA+TGG | 0.540835 | 1_4:-2659182 | Msa0143670:CDS |
| ACCTACACTTTGGCTTACAT+TGG | 0.542241 | 1_4:+2660041 | None:intergenic |
| GAAAAGCACAACATTTCACT+TGG | 0.547280 | 1_4:-2659739 | Msa0143670:CDS |
| AGCTTGAAACCAATAAGAGT+GGG | 0.548716 | 1_4:-2658865 | Msa0143670:CDS |
| AGGCAGTGTTTAAGCACTTG+GGG | 0.559218 | 1_4:+2659143 | None:intergenic |
| TGGAGAACAAGTGAAAGTAC+TGG | 0.572339 | 1_4:-2659308 | Msa0143670:CDS |
| GGATTAGAGAGCCTTCTTGG+TGG | 0.579620 | 1_4:+2659976 | None:intergenic |
| ACTCGTTCGTCTGATGATGA+AGG | 0.582042 | 1_4:-2659208 | Msa0143670:CDS |
| TTCAATCAAATCATCATCAG+TGG | 0.585107 | 1_4:+2658555 | None:intergenic |
| AGGAAAGCTGATGCTAAAGA+AGG | 0.586233 | 1_4:-2658827 | Msa0143670:intron |
| CAATCTCTGAGACAAGATCA+AGG | 0.592779 | 1_4:-2659903 | Msa0143670:CDS |
| GATCTGAAAATCTCAGAGAC+CGG | 0.593480 | 1_4:+2659838 | None:intergenic |
| TATTTCACAGATGCCAGAAG+AGG | 0.595376 | 1_4:-2659233 | Msa0143670:CDS |
| AAGCTTGAAACCAATAAGAG+TGG | 0.600197 | 1_4:-2658866 | Msa0143670:CDS |
| GGTCAGTTTACCAGTAGCCA+TGG | 0.603404 | 1_4:+2659165 | None:intergenic |
| ACTCCGAGTCCAAAGGCGGT+TGG | 0.613714 | 1_4:-2659937 | Msa0143670:CDS |
| AGCCTTGGAGGCAGGATGTG+AGG | 0.616507 | 1_4:-2659704 | Msa0143670:intron |
| ATCTACAACTCCGAGTCCAA+AGG | 0.621399 | 1_4:-2659944 | Msa0143670:CDS |
| TGTGTATAATATTCTGTGTG+TGG | 0.624819 | 1_4:-2658479 | Msa0143670:three_prime_UTR |
| CAAGTGCTAAACCACCAAGA+AGG | 0.625854 | 1_4:-2659987 | Msa0143670:CDS |
| GATCTAGAAGCCGAACGCAG+TGG | 0.627660 | 1_4:+2660915 | None:intergenic |
| GCGTTCGGCTTCTAGATCCA+AGG | 0.635836 | 1_4:-2660910 | Msa0143670:CDS |
| GTGGGGTCAAGAAATATGGA+AGG | 0.640207 | 1_4:-2658847 | Msa0143670:CDS |
| TCAAACCAGAACCCGAACGC+CGG | 0.647853 | 1_4:-2659857 | Msa0143670:CDS |
| GGCAGTGTTTAAGCACTTGG+GGG | 0.661328 | 1_4:+2659144 | None:intergenic |
| TACAACTCCGAGTCCAAAGG+CGG | 0.670021 | 1_4:-2659941 | Msa0143670:CDS |
| GTCCTTGCCAGAGAAATCAA+GGG | 0.679822 | 1_4:+2660017 | None:intergenic |
| GCCAATGTAAGCCAAAGTGT+AGG | 0.695393 | 1_4:-2660042 | Msa0143670:CDS |
| AATACCAGAAACATCAACAG+AGG | 0.698470 | 1_4:+2661067 | None:intergenic |
| GCTTGAAACCAATAAGAGTG+GGG | 0.706638 | 1_4:-2658864 | Msa0143670:CDS |
| TCTCTGAGACAAGATCAAGG+AGG | 0.818846 | 1_4:-2659900 | Msa0143670:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTATTTCTTTTCTTTTTTA+AGG | - | chr1_4:2661159-2661178 | Msa0143670:five_prime_UTR | 10.0% |
| !! | AACAATCAATTAATTGAAAA+AGG | + | chr1_4:2658427-2658446 | None:intergenic | 15.0% |
| !! | TACTTTATACTCTATATATT+TGG | - | chr1_4:2661074-2661093 | Msa0143670:CDS | 15.0% |
| !!! | TATATTTGGTTTTATTATAG+TGG | - | chr1_4:2661088-2661107 | Msa0143670:exon | 15.0% |
| !!! | TAGAGAATTATAGTTTTGTT+TGG | - | chr1_4:2658659-2658678 | Msa0143670:intron | 20.0% |
| !! | TGAAGTTAATTTCAAAACAT+TGG | - | chr1_4:2658736-2658755 | Msa0143670:intron | 20.0% |
| !! | TTATTATGTTGAAAATCGAA+GGG | + | chr1_4:2658813-2658832 | None:intergenic | 20.0% |
| !! | TTTATTATGTTGAAAATCGA+AGG | + | chr1_4:2658814-2658833 | None:intergenic | 20.0% |
| !! | AATCTAAAAATAAGAGCTTT+AGG | - | chr1_4:2659002-2659021 | Msa0143670:CDS | 20.0% |
| !! | TTCATATATAACTAAGGTTA+TGG | + | chr1_4:2659282-2659301 | None:intergenic | 20.0% |
| !!! | TCAGTTTTCATATATAACTA+AGG | + | chr1_4:2659288-2659307 | None:intergenic | 20.0% |
| !!! | AATCTAATTTACATTTTCAG+AGG | - | chr1_4:2659375-2659394 | Msa0143670:CDS | 20.0% |
| !! | ATGACAAAATTGAAATAAAC+AGG | + | chr1_4:2659797-2659816 | None:intergenic | 20.0% |
| !!! | AATTTTAAAACTTGCTAAGT+AGG | + | chr1_4:2659840-2659859 | None:intergenic | 20.0% |
| !!! | TATTGTGATTTTTGATATTG+TGG | - | chr1_4:2659867-2659886 | Msa0143670:CDS | 20.0% |
| !!! | ACTGTTTTTTTTTTCCTTTC+AGG | - | chr1_4:2658475-2658494 | Msa0143670:three_prime_UTR | 25.0% |
| !!! | CTGTTTTTTTTTTCCTTTCA+GGG | - | chr1_4:2658476-2658495 | Msa0143670:three_prime_UTR | 25.0% |
| ! | GTGTATAATGTAATTAACGT+TGG | + | chr1_4:2658786-2658805 | None:intergenic | 25.0% |
| ! | ATTCCTTAACATGTATCTTT+AGG | + | chr1_4:2658985-2659004 | None:intergenic | 25.0% |
| ! | ACCAACATGTATACATATAT+TGG | - | chr1_4:2659093-2659112 | Msa0143670:CDS | 25.0% |
| ! | GTTCACATTAAACAAACTAA+AGG | + | chr1_4:2659125-2659144 | None:intergenic | 25.0% |
| !!! | AAACTGAGTGAATACTTTTT+AGG | - | chr1_4:2659301-2659320 | Msa0143670:CDS | 25.0% |
| !!! | AACTGAGTGAATACTTTTTA+GGG | - | chr1_4:2659302-2659321 | Msa0143670:CDS | 25.0% |
| ! | ATAAACAGGAATGAATTGAT+TGG | + | chr1_4:2659783-2659802 | None:intergenic | 25.0% |
| ! | TGCAATCAAAGTTTATCAAT+TGG | + | chr1_4:2659909-2659928 | None:intergenic | 25.0% |
| ! | AAATCACATATATACATGAG+TGG | - | chr1_4:2659954-2659973 | Msa0143670:CDS | 25.0% |
| !!! | TAATCAAGTCGTCTTTTTTA+TGG | - | chr1_4:2660028-2660047 | Msa0143670:CDS | 25.0% |
| !!! | TTTTGGCTAATTTCCTTTTT+GGG | + | chr1_4:2660371-2660390 | None:intergenic | 25.0% |
| ! | TGCTGAAGAAAAAGAAAATA+TGG | - | chr1_4:2660761-2660780 | Msa0143670:intron | 25.0% |
| ! | GAAAAAGAAAATATGGTAAG+TGG | - | chr1_4:2660768-2660787 | Msa0143670:intron | 25.0% |
| ! | AGAATATATGTCTGATATGT+TGG | - | chr1_4:2660849-2660868 | Msa0143670:intron | 25.0% |
| ! | TCTTCTTGTATTGAATGTTA+TGG | - | chr1_4:2661036-2661055 | Msa0143670:intron | 25.0% |
| CTAACACAAAAAACCAACTT+TGG | - | chr1_4:2658313-2658332 | Msa0143670:three_prime_UTR | 30.0% | |
| AGAGAAACTAATTCCAAAGT+TGG | + | chr1_4:2658329-2658348 | None:intergenic | 30.0% | |
| !!! | AGTGGATATCTTTGAAGTTT+TGG | + | chr1_4:2658520-2658539 | None:intergenic | 30.0% |
| ACTCAGATTGTTTGAATTTG+TGG | - | chr1_4:2658698-2658717 | Msa0143670:CDS | 30.0% | |
| CTCAGATTGTTTGAATTTGT+GGG | - | chr1_4:2658699-2658718 | Msa0143670:CDS | 30.0% | |
| TCAGATTGTTTGAATTTGTG+GGG | - | chr1_4:2658700-2658719 | Msa0143670:CDS | 30.0% | |
| AACTGAAAATTCATGCAAGA+AGG | - | chr1_4:2658849-2658868 | Msa0143670:CDS | 30.0% | |
| TCATGCAAGAAGGATAATAT+TGG | - | chr1_4:2658859-2658878 | Msa0143670:CDS | 30.0% | |
| GCCAATATATGTATACATGT+TGG | + | chr1_4:2659097-2659116 | None:intergenic | 30.0% | |
| ACAAAGACTTATCGATCTTA+AGG | + | chr1_4:2659187-2659206 | None:intergenic | 30.0% | |
| TAAGTCTTGCATAATGCAAA+TGG | + | chr1_4:2659246-2659265 | None:intergenic | 30.0% | |
| TGTACTCTACTTCAATTCAA+GGG | + | chr1_4:2659346-2659365 | None:intergenic | 30.0% | |
| TTGTACTCTACTTCAATTCA+AGG | + | chr1_4:2659347-2659366 | None:intergenic | 30.0% | |
| ! | CAAGTTCAGTAAGTTTTTGT+TGG | + | chr1_4:2660124-2660143 | None:intergenic | 30.0% |
| CAACAAAAACTTACTGAACT+TGG | - | chr1_4:2660122-2660141 | Msa0143670:intron | 30.0% | |
| !! | CTTTTGGCTAATTTCCTTTT+TGG | + | chr1_4:2660372-2660391 | None:intergenic | 30.0% |
| !!! | TTTTGGCTAGTTTCCTTTTT+GGG | + | chr1_4:2660449-2660468 | None:intergenic | 30.0% |
| ACTAGCCAAAAGAAAAATCT+TGG | - | chr1_4:2660458-2660477 | Msa0143670:intron | 30.0% | |
| ! | TGGTTCCAAGATTTTTCTTT+TGG | + | chr1_4:2660466-2660485 | None:intergenic | 30.0% |
| !! | ACTTTTTAACTGACCTACTA+CGG | + | chr1_4:2660550-2660569 | None:intergenic | 30.0% |
| ! | TTGTCTAAAATCTAATGCCT+TGG | - | chr1_4:2660689-2660708 | Msa0143670:intron | 30.0% |
| ! | TTTTCTTCAGCACTTGTAAT+AGG | + | chr1_4:2660753-2660772 | None:intergenic | 30.0% |
| !!! | ATATGTTGGTTTTGTCTTGT+AGG | - | chr1_4:2660863-2660882 | Msa0143670:CDS | 30.0% |
| TTCAATCAAATCATCATCAG+TGG | + | chr1_4:2660898-2660917 | None:intergenic | 30.0% | |
| !! | TGTCATTCTGAAACTTTGTT+TGG | - | chr1_4:2660947-2660966 | Msa0143670:CDS | 30.0% |
| TGTGTATAATATTCTGTGTG+TGG | - | chr1_4:2660971-2660990 | Msa0143670:intron | 30.0% | |
| TCATTCTTCACCAAAAACGA+TGG | - | chr1_4:2658348-2658367 | Msa0143670:intron | 35.0% | |
| ! | TGTTGTTCTTCCATCGTTTT+TGG | + | chr1_4:2658361-2658380 | None:intergenic | 35.0% |
| AATACCAGAAACATCAACAG+AGG | + | chr1_4:2658386-2658405 | None:intergenic | 35.0% | |
| GTGCCTAAAGATACATGTTA+AGG | - | chr1_4:2658979-2658998 | Msa0143670:CDS | 35.0% | |
| TTGATCTTGTCTCAGAGATT+GGG | + | chr1_4:2659548-2659567 | None:intergenic | 35.0% | |
| TCTTGTCTTCAGCTTCATAT+TGG | - | chr1_4:2659658-2659677 | Msa0143670:intron | 35.0% | |
| ! | CATTTTCAGAGAGCTTGATT+TGG | + | chr1_4:2659689-2659708 | None:intergenic | 35.0% |
| ! | GAAAAGCACAACATTTCACT+TGG | - | chr1_4:2659711-2659730 | Msa0143670:CDS | 35.0% |
| ! | AGACGACTTGATTAGTTCAT+GGG | + | chr1_4:2660022-2660041 | None:intergenic | 35.0% |
| ! | AAGACGACTTGATTAGTTCA+TGG | + | chr1_4:2660023-2660042 | None:intergenic | 35.0% |
| ! | TCGTCTTGTAATTTCTGGAA+GGG | + | chr1_4:2660077-2660096 | None:intergenic | 35.0% |
| ! | CAGTAAGTTTTTGTTGGTGT+CGG | + | chr1_4:2660118-2660137 | None:intergenic | 35.0% |
| AGGAGAAATGACTTGAATAG+AGG | + | chr1_4:2660330-2660349 | None:intergenic | 35.0% | |
| ! | AGGCAGTGAGATTTTTCTTT+TGG | + | chr1_4:2660388-2660407 | None:intergenic | 35.0% |
| !!! | CTTTTGGCTAGTTTCCTTTT+TGG | + | chr1_4:2660450-2660469 | None:intergenic | 35.0% |
| !! | TCTGAGATTTTCTCTCAACT+TGG | + | chr1_4:2660486-2660505 | None:intergenic | 35.0% |
| GCAATTTCAAAATCTGCTTC+TGG | - | chr1_4:2660515-2660534 | Msa0143670:intron | 35.0% | |
| !! | TTATTGGTTTCAAGCTTGCT+TGG | + | chr1_4:2660581-2660600 | None:intergenic | 35.0% |
| AAGCTTGAAACCAATAAGAG+TGG | - | chr1_4:2660584-2660603 | Msa0143670:intron | 35.0% | |
| AGCTTGAAACCAATAAGAGT+GGG | - | chr1_4:2660585-2660604 | Msa0143670:intron | 35.0% | |
| AGCAAAAAGTAACAACACCA+AGG | + | chr1_4:2660709-2660728 | None:intergenic | 35.0% | |
| ! | GTTTTGTCTTGTAGGATGTT+CGG | - | chr1_4:2660871-2660890 | Msa0143670:CDS | 35.0% |
| !! | GGAGTTTGCTTGATCTTTTT+AGG | - | chr1_4:2660992-2661011 | Msa0143670:intron | 35.0% |
| !!! | GGTTTTATTATAGTGGTCTG+TGG | - | chr1_4:2661095-2661114 | Msa0143670:exon | 35.0% |
| CAATCCTCTGTTGATGTTTC+TGG | - | chr1_4:2658379-2658398 | Msa0143670:three_prime_UTR | 40.0% | |
| TCAAAGATATCCACTGCGTT+CGG | - | chr1_4:2658525-2658544 | Msa0143670:three_prime_UTR | 40.0% | |
| ! | CCTCTTAGATTGAGAAGCAT+TGG | + | chr1_4:2658593-2658612 | None:intergenic | 40.0% |
| CCAATGCTTCTCAATCTAAG+AGG | - | chr1_4:2658590-2658609 | Msa0143670:intron | 40.0% | |
| ! | ACCTACACTTTGGCTTACAT+TGG | + | chr1_4:2659412-2659431 | None:intergenic | 40.0% |
| GGAGTTGTAGATGATTTGAC+AGG | + | chr1_4:2659498-2659517 | None:intergenic | 40.0% | |
| TGATCTTGTCTCAGAGATTG+GGG | + | chr1_4:2659547-2659566 | None:intergenic | 40.0% | |
| CTTGATCTTGTCTCAGAGAT+TGG | + | chr1_4:2659549-2659568 | None:intergenic | 40.0% | |
| !! | CAATCTCTGAGACAAGATCA+AGG | - | chr1_4:2659547-2659566 | Msa0143670:intron | 40.0% |
| GATCTGAAAATCTCAGAGAC+CGG | + | chr1_4:2659615-2659634 | None:intergenic | 40.0% | |
| ! | TGGATTCTTCAAACTAGCCT+TGG | - | chr1_4:2659731-2659750 | Msa0143670:CDS | 40.0% |
| !! | ATTCTTCAAACTAGCCTTGG+AGG | - | chr1_4:2659734-2659753 | Msa0143670:CDS | 40.0% |
| TGCAATCGCATCATGATCTT+TGG | - | chr1_4:2659925-2659944 | Msa0143670:CDS | 40.0% | |
| ! | CTCGTCTTGTAATTTCTGGA+AGG | + | chr1_4:2660078-2660097 | None:intergenic | 40.0% |
| TCAGCTCGTCTTGTAATTTC+TGG | + | chr1_4:2660082-2660101 | None:intergenic | 40.0% | |
| ! | TGGAGAACAAGTGAAAGTAC+TGG | - | chr1_4:2660142-2660161 | Msa0143670:intron | 40.0% |
| TATTTCACAGATGCCAGAAG+AGG | - | chr1_4:2660217-2660236 | Msa0143670:intron | 40.0% | |
| AGGAGAAGTGACTTGAATAG+AGG | + | chr1_4:2660408-2660427 | None:intergenic | 40.0% | |
| TCTATTCAAGTCACTTCTCC+TGG | - | chr1_4:2660407-2660426 | Msa0143670:intron | 40.0% | |
| AACCATAGAGTCACCCAAAA+AGG | - | chr1_4:2660433-2660452 | Msa0143670:intron | 40.0% | |
| !!! | TTCCTTTTTGGGTGACTCTA+TGG | + | chr1_4:2660438-2660457 | None:intergenic | 40.0% |
| GCTTGAAACCAATAAGAGTG+GGG | - | chr1_4:2660586-2660605 | Msa0143670:intron | 40.0% | |
| TTTCTTGACCCCACTCTTAT+TGG | + | chr1_4:2660597-2660616 | None:intergenic | 40.0% | |
| AAGAGTGGGGTCAAGAAATA+TGG | - | chr1_4:2660599-2660618 | Msa0143670:intron | 40.0% | |
| AGGAAAGCTGATGCTAAAGA+AGG | - | chr1_4:2660623-2660642 | Msa0143670:intron | 40.0% | |
| !! | TGAGAAGCATTGGTGCTAAC+AGG | + | chr1_4:2658583-2658602 | None:intergenic | 45.0% |
| GCCAATGTAAGCCAAAGTGT+AGG | - | chr1_4:2659408-2659427 | Msa0143670:intron | 45.0% | |
| !! | AATCAAGGGCACCTACACTT+TGG | + | chr1_4:2659422-2659441 | None:intergenic | 45.0% |
| GTCCTTGCCAGAGAAATCAA+GGG | + | chr1_4:2659436-2659455 | None:intergenic | 45.0% | |
| TGTCCTTGCCAGAGAAATCA+AGG | + | chr1_4:2659437-2659456 | None:intergenic | 45.0% | |
| CAAGTGCTAAACCACCAAGA+AGG | - | chr1_4:2659463-2659482 | Msa0143670:intron | 45.0% | |
| ACAGGATTAGAGAGCCTTCT+TGG | + | chr1_4:2659480-2659499 | None:intergenic | 45.0% | |
| ATCTACAACTCCGAGTCCAA+AGG | - | chr1_4:2659506-2659525 | Msa0143670:intron | 45.0% | |
| !! | TCTCTGAGACAAGATCAAGG+AGG | - | chr1_4:2659550-2659569 | Msa0143670:intron | 45.0% |
| ! | ACTCGTTCGTCTGATGATGA+AGG | - | chr1_4:2660242-2660261 | Msa0143670:intron | 45.0% |
| CTTCAGCACTTCTTCTACCA+TGG | - | chr1_4:2660268-2660287 | Msa0143670:intron | 45.0% | |
| ACTTCTTCTACCATGGCTAC+TGG | - | chr1_4:2660275-2660294 | Msa0143670:intron | 45.0% | |
| AGGCAGTGTTTAAGCACTTG+GGG | + | chr1_4:2660310-2660329 | None:intergenic | 45.0% | |
| GAGGCAGTGTTTAAGCACTT+GGG | + | chr1_4:2660311-2660330 | None:intergenic | 45.0% | |
| AGAGGCAGTGTTTAAGCACT+TGG | + | chr1_4:2660312-2660331 | None:intergenic | 45.0% | |
| !! | TTCCTTTTTGGGCGACTCTA+TGG | + | chr1_4:2660360-2660379 | None:intergenic | 45.0% |
| !! | GGTGACTCTATGGTTTTACC+AGG | + | chr1_4:2660428-2660447 | None:intergenic | 45.0% |
| CTGGTAGTTTGAACCGTAGT+AGG | - | chr1_4:2660534-2660553 | Msa0143670:intron | 45.0% | |
| GTGGGGTCAAGAAATATGGA+AGG | - | chr1_4:2660603-2660622 | Msa0143670:intron | 45.0% | |
| CAGAAGCAGAGTTCCCTGAA+AGG | + | chr1_4:2658492-2658511 | None:intergenic | 50.0% | |
| ! | TGCATCTGGCTTCTGTTCCT+TGG | + | chr1_4:2658560-2658579 | None:intergenic | 50.0% |
| !! | TTGGTGCTAACAGGTGCATC+TGG | + | chr1_4:2658574-2658593 | None:intergenic | 50.0% |
| GTAGGTGCCCTTGATTTCTC+TGG | - | chr1_4:2659426-2659445 | Msa0143670:intron | 50.0% | |
| TGCCCTTGATTTCTCTGGCA+AGG | - | chr1_4:2659431-2659450 | Msa0143670:intron | 50.0% | |
| GGATTAGAGAGCCTTCTTGG+TGG | + | chr1_4:2659477-2659496 | None:intergenic | 50.0% | |
| TACAACTCCGAGTCCAAAGG+CGG | - | chr1_4:2659509-2659528 | Msa0143670:intron | 50.0% | |
| GTTATGTTGCCAACCGCCTT+TGG | + | chr1_4:2659525-2659544 | None:intergenic | 50.0% | |
| GAGACAAGATCAAGGAGGTC+TGG | - | chr1_4:2659555-2659574 | Msa0143670:intron | 50.0% | |
| AAATCTCAGAGACCGGCGTT+CGG | + | chr1_4:2659608-2659627 | None:intergenic | 50.0% | |
| !! | TTCAAACTAGCCTTGGAGGC+AGG | - | chr1_4:2659738-2659757 | Msa0143670:CDS | 50.0% |
| TGTAGTCTAGCCCACAACCA+CGG | + | chr1_4:2659986-2660005 | None:intergenic | 50.0% | |
| GACGAACGAGTTTCCTCTTC+TGG | + | chr1_4:2660233-2660252 | None:intergenic | 50.0% | |
| GGTCAGTTTACCAGTAGCCA+TGG | + | chr1_4:2660288-2660307 | None:intergenic | 50.0% | |
| GGCAGTGTTTAAGCACTTGG+GGG | + | chr1_4:2660309-2660328 | None:intergenic | 50.0% | |
| !! | GGCGACTCTATGGCTTTAAC+AGG | + | chr1_4:2660350-2660369 | None:intergenic | 50.0% |
| AGCCATAGAGTCGCCCAAAA+AGG | - | chr1_4:2660355-2660374 | Msa0143670:intron | 50.0% | |
| GATCTAGAAGCCGAACGCAG+TGG | + | chr1_4:2658538-2658557 | None:intergenic | 55.0% | |
| GCGTTCGGCTTCTAGATCCA+AGG | - | chr1_4:2658540-2658559 | Msa0143670:exon | 55.0% | |
| TTGCCAACCGCCTTTGGACT+CGG | + | chr1_4:2659519-2659538 | None:intergenic | 55.0% | |
| !! | GGGTTCTGGTTTGAGGCTCT+TGG | + | chr1_4:2659587-2659606 | None:intergenic | 55.0% |
| TCAAACCAGAACCCGAACGC+CGG | - | chr1_4:2659593-2659612 | Msa0143670:intron | 55.0% | |
| AATCTCAGAGACCGGCGTTC+GGG | + | chr1_4:2659607-2659626 | None:intergenic | 55.0% | |
| TACCTCACATCCTGCCTCCA+AGG | + | chr1_4:2659751-2659770 | None:intergenic | 55.0% | |
| TACATGAGTGGCCTCAACCG+TGG | - | chr1_4:2659966-2659985 | Msa0143670:CDS | 55.0% | |
| ACTCCGAGTCCAAAGGCGGT+TGG | - | chr1_4:2659513-2659532 | Msa0143670:intron | 60.0% | |
| !! | GGCGTTCGGGTTCTGGTTTG+AGG | + | chr1_4:2659594-2659613 | None:intergenic | 60.0% |
| AGCCTTGGAGGCAGGATGTG+AGG | - | chr1_4:2659746-2659765 | Msa0143670:CDS | 60.0% | |
| AGTGGCCTCAACCGTGGTTG+TGG | - | chr1_4:2659972-2659991 | Msa0143670:CDS | 60.0% | |
| GTGGCCTCAACCGTGGTTGT+GGG | - | chr1_4:2659973-2659992 | Msa0143670:CDS | 60.0% | |
| CTAGCCCACAACCACGGTTG+AGG | + | chr1_4:2659980-2659999 | None:intergenic | 60.0% | |
| ! | AGAGACCGGCGTTCGGGTTC+TGG | + | chr1_4:2659601-2659620 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 2658262 | 2661210 | 2658262 | ID=Msa0143670;Name=Msa0143670 |
| chr1_4 | mRNA | 2658262 | 2661210 | 2658262 | ID=Msa0143670-mRNA-1;Parent=Msa0143670;Name=Msa0143670-mRNA-1;_AED=0.13;_eAED=0.13;_QI=105|1|1|1|0.83|0.71|7|255|392 |
| chr1_4 | exon | 2658262 | 2658333 | 2658262 | ID=Msa0143670-mRNA-1:exon:1186;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2658363 | 2658587 | 2658363 | ID=Msa0143670-mRNA-1:exon:1185;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2658690 | 2658733 | 2658690 | ID=Msa0143670-mRNA-1:exon:1184;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2658828 | 2659398 | 2658828 | ID=Msa0143670-mRNA-1:exon:1183;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2659705 | 2660077 | 2659705 | ID=Msa0143670-mRNA-1:exon:1182;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2660861 | 2660975 | 2660861 | ID=Msa0143670-mRNA-1:exon:1181;Parent=Msa0143670-mRNA-1 |
| chr1_4 | exon | 2661072 | 2661210 | 2661072 | ID=Msa0143670-mRNA-1:exon:1180;Parent=Msa0143670-mRNA-1 |
| chr1_4 | five_prime_UTR | 2661106 | 2661210 | 2661106 | ID=Msa0143670-mRNA-1:five_prime_utr;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2661072 | 2661105 | 2661072 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2660861 | 2660975 | 2660861 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2659705 | 2660077 | 2659705 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2658828 | 2659398 | 2658828 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2658690 | 2658733 | 2658690 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | CDS | 2658546 | 2658587 | 2658546 | ID=Msa0143670-mRNA-1:cds;Parent=Msa0143670-mRNA-1 |
| chr1_4 | three_prime_UTR | 2658363 | 2658545 | 2658363 | ID=Msa0143670-mRNA-1:three_prime_utr;Parent=Msa0143670-mRNA-1 |
| chr1_4 | three_prime_UTR | 2658262 | 2658333 | 2658262 | ID=Msa0143670-mRNA-1:three_prime_utr;Parent=Msa0143670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
