Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748610 | G7K815 | 91.257 | 549 | 35 | 2 | 1 | 539 | 1 | 546 | 0.0 | 970 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0029020 | Msa0748610 | -0.804755 | 1.855283e-49 | -8.615850e-47 |
| Msa0046820 | Msa0748610 | 0.802885 | 4.537491e-49 | -8.615850e-47 |
| Msa0068700 | Msa0748610 | -0.817766 | 2.780703e-52 | -8.615850e-47 |
| Msa0624730 | Msa0748610 | 0.800069 | 1.713625e-48 | -8.615850e-47 |
| Msa0657670 | Msa0748610 | 0.811351 | 7.313092e-51 | -8.615850e-47 |
| Msa0695410 | Msa0748610 | 0.818905 | 1.535491e-52 | -8.615850e-47 |
| Msa0715310 | Msa0748610 | 0.963049 | 1.304335e-121 | -8.615850e-47 |
| Msa0722930 | Msa0748610 | 0.834580 | 2.760567e-56 | -8.615850e-47 |
| Msa0723140 | Msa0748610 | 0.841933 | 3.518032e-58 | -8.615850e-47 |
| Msa0725480 | Msa0748610 | -0.852167 | 5.512543e-61 | -8.615850e-47 |
| Msa0748610 | Msa0749550 | 0.800732 | 1.255261e-48 | -8.615850e-47 |
| Msa0748610 | Msa0757180 | 0.900508 | 6.832200e-78 | -8.615850e-47 |
| Msa0748610 | Msa0757310 | 0.917269 | 6.521278e-86 | -8.615850e-47 |
| Msa0748610 | Msa0766100 | -0.849958 | 2.314329e-60 | -8.615850e-47 |
| Msa0748610 | Msa0773610 | 0.807483 | 4.943690e-50 | -8.615850e-47 |
| Msa0748610 | Msa0792170 | 0.807844 | 4.144376e-50 | -8.615850e-47 |
| Msa0748610 | Msa0792510 | 0.845807 | 3.225356e-59 | -8.615850e-47 |
| Msa0748610 | Msa0806210 | 0.818945 | 1.503856e-52 | -8.615850e-47 |
| Msa0748610 | Msa0836680 | 0.954921 | 9.898267e-113 | -8.615850e-47 |
| Msa0748610 | Msa0837990 | 0.814493 | 1.498279e-51 | -8.615850e-47 |
| Msa0748610 | Msa0843280 | 0.817468 | 3.247174e-52 | -8.615850e-47 |
| Msa0748610 | Msa0845590 | -0.816537 | 5.254284e-52 | -8.615850e-47 |
| Msa0748610 | Msa0847200 | 0.830979 | 2.164143e-55 | -8.615850e-47 |
| Msa0748610 | Msa0853540 | 0.806003 | 1.015809e-49 | -8.615850e-47 |
| Msa0748610 | Msa0902980 | 0.837452 | 5.155343e-57 | -8.615850e-47 |
| Msa0748610 | Msa0937940 | 0.801210 | 1.002767e-48 | -8.615850e-47 |
| Msa0748610 | Msa0946120 | 0.812787 | 3.556417e-51 | -8.615850e-47 |
| Msa0748610 | Msa0951720 | 0.818036 | 2.416519e-52 | -8.615850e-47 |
| Msa0748610 | Msa0988500 | 0.804980 | 1.664788e-49 | -8.615850e-47 |
| Msa0748610 | Msa1004260 | 0.800070 | 1.712615e-48 | -8.615850e-47 |
| Msa0748610 | Msa1008490 | 0.804178 | 2.446884e-49 | -8.615850e-47 |
| Msa0748610 | Msa1009000 | 0.810145 | 1.333036e-50 | -8.615850e-47 |
| Msa0748610 | Msa1018020 | -0.824282 | 8.784818e-54 | -8.615850e-47 |
| Msa0748610 | Msa1021770 | 0.802451 | 5.574484e-49 | -8.615850e-47 |
| Msa0748610 | Msa1036390 | 0.848458 | 6.050207e-60 | -8.615850e-47 |
| Msa0748610 | Msa1042890 | -0.805171 | 1.518669e-49 | -8.615850e-47 |
| Msa0748610 | Msa1046610 | 0.812756 | 3.611350e-51 | -8.615850e-47 |
| Msa0748610 | Msa1072350 | 0.813495 | 2.487135e-51 | -8.615850e-47 |
| Msa0748610 | Msa1076680 | 0.842853 | 2.006618e-58 | -8.615850e-47 |
| Msa0748610 | Msa1098560 | 0.825742 | 3.970597e-54 | -8.615850e-47 |
| Msa0748610 | Msa1112000 | 0.811147 | 8.097754e-51 | -8.615850e-47 |
| Msa0748610 | Msa1122660 | 0.810164 | 1.320791e-50 | -8.615850e-47 |
| Msa0748610 | Msa1128160 | 0.800552 | 1.366047e-48 | -8.615850e-47 |
| Msa0748610 | Msa1129100 | 0.822849 | 1.900509e-53 | -8.615850e-47 |
| Msa0748610 | Msa1147570 | 0.805830 | 1.104700e-49 | -8.615850e-47 |
| Msa0748610 | Msa1147980 | -0.800131 | 1.663842e-48 | -8.615850e-47 |
| Msa0748610 | Msa1154820 | 0.811538 | 6.657971e-51 | -8.615850e-47 |
| Msa0748610 | Msa1159360 | 0.808180 | 3.515769e-50 | -8.615850e-47 |
| Msa0748610 | Msa1165360 | 0.801026 | 1.093462e-48 | -8.615850e-47 |
| Msa0748610 | Msa1212840 | 0.800375 | 1.484708e-48 | -8.615850e-47 |
| Msa0748610 | Msa1220230 | 0.801667 | 8.082201e-49 | -8.615850e-47 |
| Msa0748610 | Msa1221200 | -0.834199 | 3.441801e-56 | -8.615850e-47 |
| Msa0748610 | Msa1228210 | 0.805268 | 1.448826e-49 | -8.615850e-47 |
| Msa0748610 | Msa1261470 | 0.809619 | 1.730190e-50 | -8.615850e-47 |
| Msa0748610 | Msa1267200 | 0.814446 | 1.533971e-51 | -8.615850e-47 |
| Msa0748610 | Msa1271280 | 0.858875 | 6.099413e-63 | -8.615850e-47 |
| Msa0748610 | Msa1271300 | 0.833117 | 6.409669e-56 | -8.615850e-47 |
| Msa0748610 | Msa1288320 | -0.811656 | 6.278827e-51 | -8.615850e-47 |
| Msa0748610 | Msa1303780 | 0.800948 | 1.133915e-48 | -8.615850e-47 |
| Msa0748610 | Msa1304180 | 0.811587 | 6.497514e-51 | -8.615850e-47 |
| Msa0748610 | Msa1329990 | 0.800107 | 1.682961e-48 | -8.615850e-47 |
| Msa0748610 | Msa1353530 | 0.809739 | 1.630714e-50 | -8.615850e-47 |
| Msa0748610 | Msa1358870 | -0.804681 | 1.922528e-49 | -8.615850e-47 |
| Msa0748610 | Msa1373950 | 0.845520 | 3.858767e-59 | -8.615850e-47 |
| Msa0748610 | Msa1388680 | 0.822220 | 2.662286e-53 | -8.615850e-47 |
| Msa0748610 | Msa1411070 | 0.816252 | 6.086295e-52 | -8.615850e-47 |
| Msa0748610 | Msa1428420 | 0.812792 | 3.546617e-51 | -8.615850e-47 |
| Msa0748610 | Msa1438270 | 0.805051 | 1.608793e-49 | -8.615850e-47 |
| Msa0748610 | Msa1447560 | 0.813964 | 1.960371e-51 | -8.615850e-47 |
| Msa0748610 | Msa1450020 | 0.801963 | 7.024405e-49 | -8.615850e-47 |
| Msa0748610 | Msa1456810 | 0.805064 | 1.599063e-49 | -8.615850e-47 |
| Msa0748610 | Msa1460310 | -0.805305 | 1.423125e-49 | -8.615850e-47 |
| Msa0748610 | Msa1464560 | 0.812951 | 3.273667e-51 | -8.615850e-47 |
| Msa0164360 | Msa0748610 | 0.825482 | 4.576689e-54 | -8.615850e-47 |
| Msa0166050 | Msa0748610 | 0.806357 | 8.555759e-50 | -8.615850e-47 |
| Msa0170580 | Msa0748610 | 0.803541 | 3.318971e-49 | -8.615850e-47 |
| Msa0208390 | Msa0748610 | 0.830646 | 2.611265e-55 | -8.615850e-47 |
| Msa0409820 | Msa0748610 | 0.801728 | 7.850570e-49 | -8.615850e-47 |
| Msa0416800 | Msa0748610 | 0.802029 | 6.810363e-49 | -8.615850e-47 |
| Msa0458790 | Msa0748610 | 0.800283 | 1.550002e-48 | -8.615850e-47 |
| Msa0463460 | Msa0748610 | 0.826823 | 2.195400e-54 | -8.615850e-47 |
| Msa0240780 | Msa0748610 | 0.800425 | 1.450196e-48 | -8.615850e-47 |
| Msa0257250 | Msa0748610 | 0.808568 | 2.904823e-50 | -8.615850e-47 |
| Msa0264940 | Msa0748610 | -0.802144 | 6.448774e-49 | -8.615850e-47 |
| Msa0265630 | Msa0748610 | 0.804523 | 2.073367e-49 | -8.615850e-47 |
| Msa0269360 | Msa0748610 | 0.824670 | 7.116034e-54 | -8.615850e-47 |
| Msa0275670 | Msa0748610 | 0.805818 | 1.110960e-49 | -8.615850e-47 |
| Msa0282170 | Msa0748610 | 0.805174 | 1.515845e-49 | -8.615850e-47 |
| Msa0298940 | Msa0748610 | 0.828988 | 6.616938e-55 | -8.615850e-47 |
| Msa0298970 | Msa0748610 | 0.800616 | 1.325470e-48 | -8.615850e-47 |
| Msa0302990 | Msa0748610 | -0.805193 | 1.502164e-49 | -8.615850e-47 |
| Msa0304740 | Msa0748610 | 0.808305 | 3.305720e-50 | -8.615850e-47 |
| Msa0331590 | Msa0748610 | 0.809419 | 1.910321e-50 | -8.615850e-47 |
| Msa0342200 | Msa0748610 | 0.804133 | 2.500625e-49 | -8.615850e-47 |
| Msa0509020 | Msa0748610 | 0.802954 | 4.389861e-49 | -8.615850e-47 |
| Msa0517340 | Msa0748610 | 0.800699 | 1.275013e-48 | -8.615850e-47 |
| Msa0524050 | Msa0748610 | 0.820113 | 8.143259e-53 | -8.615850e-47 |
| Msa0535020 | Msa0748610 | 0.813423 | 2.578503e-51 | -8.615850e-47 |
| Msa0535050 | Msa0748610 | 0.815047 | 1.129275e-51 | -8.615850e-47 |
| Msa0557680 | Msa0748610 | 0.824650 | 7.195275e-54 | -8.615850e-47 |
| Msa0591780 | Msa0748610 | 0.851711 | 7.426331e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748610 | MtrunA17_Chr5g0402501 | 91.257 | 549 | 35 | 2 | 1 | 539 | 1 | 546 | 0.0 | 970 |
| Msa0748610 | MtrunA17_Chr8g0374741 | 64.511 | 603 | 144 | 10 | 1 | 539 | 1 | 597 | 0.0 | 665 |
| Msa0748610 | MtrunA17_Chr3g0133631 | 50.276 | 543 | 219 | 16 | 25 | 537 | 47 | 568 | 1.32e-149 | 441 |
| Msa0748610 | MtrunA17_Chr1g0153951 | 50.460 | 543 | 214 | 14 | 33 | 536 | 18 | 544 | 6.15e-140 | 415 |
| Msa0748610 | MtrunA17_Chr4g0028651 | 30.664 | 587 | 311 | 16 | 33 | 537 | 121 | 693 | 1.63e-68 | 233 |
| Msa0748610 | MtrunA17_Chr5g0435281 | 30.601 | 549 | 283 | 14 | 33 | 537 | 15 | 509 | 1.41e-62 | 213 |
| Msa0748610 | MtrunA17_Chr8g0373901 | 24.466 | 609 | 352 | 16 | 10 | 537 | 39 | 620 | 6.04e-39 | 150 |
| Msa0748610 | MtrunA17_Chr5g0403231 | 23.609 | 593 | 363 | 11 | 12 | 537 | 49 | 618 | 6.50e-36 | 142 |
| Msa0748610 | MtrunA17_Chr5g0399331 | 25.091 | 550 | 334 | 13 | 24 | 536 | 66 | 574 | 2.69e-34 | 136 |
| Msa0748610 | MtrunA17_Chr4g0034351 | 26.531 | 343 | 208 | 6 | 232 | 537 | 277 | 612 | 4.52e-28 | 118 |
| Msa0748610 | MtrunA17_Chr3g0115381 | 28.358 | 201 | 126 | 6 | 299 | 487 | 520 | 714 | 1.56e-14 | 76.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0748610 | AT4G37080.2 | 54.424 | 599 | 197 | 12 | 6 | 539 | 23 | 610 | 0.0 | 564 |
| Msa0748610 | AT4G37080.3 | 54.424 | 599 | 197 | 12 | 6 | 539 | 23 | 610 | 0.0 | 564 |
| Msa0748610 | AT4G37080.1 | 54.622 | 595 | 194 | 12 | 10 | 539 | 14 | 597 | 0.0 | 562 |
| Msa0748610 | AT4G37080.4 | 51.200 | 500 | 168 | 12 | 6 | 440 | 23 | 511 | 7.18e-137 | 406 |
| Msa0748610 | AT5G42690.5 | 47.801 | 523 | 221 | 14 | 32 | 536 | 22 | 510 | 2.79e-129 | 387 |
| Msa0748610 | AT5G42690.2 | 47.801 | 523 | 221 | 14 | 32 | 536 | 49 | 537 | 8.44e-129 | 387 |
| Msa0748610 | AT5G42690.4 | 47.801 | 523 | 221 | 14 | 32 | 536 | 49 | 537 | 8.44e-129 | 387 |
| Msa0748610 | AT5G42690.1 | 47.893 | 522 | 221 | 14 | 32 | 536 | 49 | 536 | 9.83e-129 | 387 |
| Msa0748610 | AT5G42690.3 | 47.592 | 519 | 220 | 14 | 36 | 536 | 1 | 485 | 1.23e-126 | 379 |
| Msa0748610 | AT2G39690.5 | 30.996 | 542 | 300 | 15 | 34 | 537 | 18 | 523 | 2.75e-61 | 211 |
| Msa0748610 | AT2G39690.2 | 37.383 | 321 | 169 | 7 | 249 | 537 | 96 | 416 | 3.15e-61 | 207 |
| Msa0748610 | AT2G39690.4 | 31.262 | 531 | 291 | 15 | 45 | 537 | 3 | 497 | 3.69e-61 | 209 |
| Msa0748610 | AT2G39690.8 | 31.132 | 530 | 292 | 15 | 45 | 537 | 3 | 496 | 1.36e-60 | 208 |
| Msa0748610 | AT2G39690.1 | 30.869 | 541 | 301 | 15 | 34 | 537 | 18 | 522 | 1.40e-60 | 209 |
| Msa0748610 | AT3G12540.2 | 29.293 | 495 | 277 | 13 | 83 | 537 | 42 | 503 | 1.50e-58 | 202 |
| Msa0748610 | AT3G12540.1 | 28.187 | 557 | 308 | 16 | 31 | 537 | 56 | 570 | 1.52e-56 | 199 |
| Msa0748610 | AT5G60720.1 | 33.429 | 350 | 172 | 10 | 249 | 537 | 340 | 689 | 7.35e-49 | 180 |
| Msa0748610 | AT1G16750.1 | 35.769 | 260 | 145 | 5 | 295 | 536 | 271 | 526 | 1.47e-39 | 151 |
| Msa0748610 | AT5G47380.5 | 24.735 | 566 | 356 | 13 | 2 | 536 | 3 | 529 | 2.32e-38 | 148 |
| Msa0748610 | AT5G47380.1 | 25.141 | 533 | 332 | 12 | 35 | 536 | 89 | 585 | 3.48e-38 | 149 |
| Msa0748610 | AT5G47380.4 | 25.141 | 533 | 332 | 12 | 35 | 536 | 89 | 585 | 3.86e-38 | 148 |
| Msa0748610 | AT3G13000.3 | 25.439 | 570 | 312 | 18 | 35 | 536 | 49 | 573 | 1.62e-33 | 134 |
| Msa0748610 | AT3G13000.2 | 25.439 | 570 | 312 | 18 | 35 | 536 | 49 | 573 | 1.62e-33 | 134 |
| Msa0748610 | AT3G13000.1 | 25.439 | 570 | 312 | 18 | 35 | 536 | 20 | 544 | 1.72e-33 | 134 |
| Msa0748610 | AT2G23700.1 | 29.830 | 352 | 194 | 9 | 231 | 537 | 358 | 701 | 4.07e-32 | 131 |
| Msa0748610 | AT2G39690.6 | 28.668 | 443 | 244 | 14 | 34 | 440 | 18 | 424 | 6.12e-30 | 122 |
| Msa0748610 | AT2G39690.7 | 28.507 | 442 | 245 | 14 | 34 | 440 | 18 | 423 | 2.22e-29 | 120 |
| Msa0748610 | AT3G18900.5 | 29.814 | 322 | 174 | 11 | 245 | 537 | 227 | 525 | 1.44e-27 | 116 |
| Msa0748610 | AT3G18900.4 | 29.814 | 322 | 174 | 11 | 245 | 537 | 232 | 530 | 1.46e-27 | 116 |
| Msa0748610 | AT3G18900.6 | 29.874 | 318 | 179 | 11 | 245 | 537 | 151 | 449 | 3.98e-27 | 114 |
| Msa0748610 | AT3G18900.3 | 29.874 | 318 | 179 | 11 | 245 | 537 | 151 | 449 | 3.98e-27 | 114 |
| Msa0748610 | AT5G66600.14 | 23.446 | 563 | 342 | 15 | 37 | 537 | 73 | 608 | 3.60e-26 | 113 |
| Msa0748610 | AT5G66600.1 | 23.446 | 563 | 342 | 15 | 37 | 537 | 73 | 608 | 3.60e-26 | 113 |
| Msa0748610 | AT5G66600.4 | 23.446 | 563 | 342 | 15 | 37 | 537 | 73 | 608 | 3.60e-26 | 113 |
| Msa0748610 | AT5G66600.9 | 23.446 | 563 | 342 | 15 | 37 | 537 | 73 | 608 | 3.60e-26 | 113 |
| Msa0748610 | AT5G66600.3 | 23.446 | 563 | 342 | 15 | 37 | 537 | 73 | 608 | 3.60e-26 | 113 |
| Msa0748610 | AT5G66600.7 | 23.363 | 565 | 344 | 15 | 35 | 537 | 17 | 554 | 4.25e-26 | 112 |
| Msa0748610 | AT5G66600.2 | 23.446 | 563 | 342 | 15 | 37 | 537 | 53 | 588 | 5.54e-26 | 112 |
| Msa0748610 | AT1G43020.1 | 27.036 | 307 | 186 | 11 | 248 | 538 | 151 | 435 | 3.34e-25 | 108 |
| Msa0748610 | AT1G76620.1 | 25.672 | 335 | 192 | 7 | 249 | 537 | 193 | 516 | 5.97e-25 | 108 |
| Msa0748610 | AT5G47380.2 | 24.374 | 439 | 266 | 11 | 35 | 443 | 89 | 491 | 1.93e-22 | 101 |
| Msa0748610 | AT5G47380.3 | 23.908 | 435 | 265 | 11 | 35 | 439 | 89 | 487 | 9.62e-22 | 99.0 |
| Msa0748610 | AT1G21060.1 | 26.250 | 320 | 194 | 7 | 249 | 539 | 199 | 505 | 1.17e-21 | 99.0 |
| Msa0748610 | AT1G21060.2 | 26.250 | 320 | 194 | 7 | 249 | 539 | 187 | 493 | 1.25e-21 | 98.6 |
| Msa0748610 | AT2G39690.3 | 27.642 | 369 | 200 | 12 | 45 | 382 | 3 | 335 | 2.84e-21 | 96.3 |
| Msa0748610 | AT4G08550.1 | 25.911 | 247 | 156 | 8 | 301 | 533 | 402 | 635 | 1.16e-16 | 83.6 |
| Msa0748610 | AT4G08550.2 | 25.911 | 247 | 156 | 8 | 301 | 533 | 456 | 689 | 1.61e-16 | 83.2 |
| Msa0748610 | AT1G16750.2 | 41.860 | 86 | 50 | 0 | 295 | 380 | 271 | 356 | 1.24e-14 | 76.3 |
| Msa0748610 | AT3G11920.1 | 27.014 | 211 | 130 | 8 | 301 | 496 | 393 | 594 | 5.66e-13 | 72.0 |
| Msa0748610 | AT5G66600.12 | 25.738 | 237 | 135 | 4 | 245 | 440 | 278 | 514 | 5.76e-13 | 71.6 |
| Msa0748610 | AT5G66600.11 | 25.738 | 237 | 135 | 4 | 245 | 440 | 278 | 514 | 5.76e-13 | 71.6 |
| Msa0748610 | AT5G66600.6 | 25.738 | 237 | 135 | 4 | 245 | 440 | 278 | 514 | 5.76e-13 | 71.6 |
| Msa0748610 | AT5G66600.13 | 25.738 | 237 | 135 | 4 | 245 | 440 | 278 | 514 | 5.76e-13 | 71.6 |
| Msa0748610 | AT1G43020.3 | 25.728 | 206 | 123 | 8 | 248 | 439 | 151 | 340 | 3.02e-12 | 68.6 |
| Msa0748610 | AT3G18900.1 | 28.182 | 220 | 119 | 7 | 245 | 440 | 232 | 436 | 1.78e-11 | 67.0 |
Find 119 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGTTGTTTGTGAATTAT+TGG | 0.137250 | 5_2:+1848031 | Msa0748610:five_prime_UTR |
| TCCTAGATTGTCCTTGAATA+TGG | 0.203016 | 5_2:-1849913 | None:intergenic |
| GGACGATGTCTGTTTGTTTA+AGG | 0.204288 | 5_2:-1847883 | None:intergenic |
| ACCAGGAGAAACTTGCATTT+TGG | 0.212496 | 5_2:+1850217 | Msa0748610:CDS |
| TGCCCTATGATTTCAGTTTC+AGG | 0.214439 | 5_2:+1851891 | Msa0748610:CDS |
| ATGAAAGCAAGAGGCATATT+TGG | 0.216429 | 5_2:+1850934 | Msa0748610:CDS |
| TGGATCCTTTGATGGAATTC+TGG | 0.239508 | 5_2:-1849414 | None:intergenic |
| ATATCCTCTGAAACTCTATT+TGG | 0.284459 | 5_2:-1849855 | None:intergenic |
| CTTGGAATCTTTGTTGGATT+GGG | 0.291306 | 5_2:+1851775 | Msa0748610:CDS |
| CAAGTAATGTTTCCTTTGAT+AGG | 0.299053 | 5_2:+1852059 | Msa0748610:three_prime_UTR |
| GCTTGTGTAAAGTACCAATA+TGG | 0.316724 | 5_2:-1847810 | None:intergenic |
| GAAATCTATTGAAAAGAAAA+TGG | 0.326415 | 5_2:+1849591 | Msa0748610:CDS |
| CTTTCTACTAGAAGCACTTC+TGG | 0.332145 | 5_2:-1849509 | None:intergenic |
| AGCAAGAGGCATATTTGGTT+TGG | 0.336129 | 5_2:+1850939 | Msa0748610:CDS |
| GACCTTTGTAAACTGCAATA+AGG | 0.339529 | 5_2:+1852087 | Msa0748610:three_prime_UTR |
| CTCTTCTGGTATTGAAGATA+AGG | 0.350268 | 5_2:-1849569 | None:intergenic |
| TGAAGATAAGGAGTCTTGTT+TGG | 0.352746 | 5_2:-1849557 | None:intergenic |
| TTTCAGACAAGGTTTATATC+AGG | 0.354150 | 5_2:+1849336 | Msa0748610:CDS |
| TTGTCATCATTATCCCATAT+TGG | 0.354486 | 5_2:+1847796 | None:intergenic |
| AGAGCACTCACTAGACCTTT+AGG | 0.357274 | 5_2:+1849045 | Msa0748610:CDS |
| TATGAGAATTTCCATATTCA+AGG | 0.365612 | 5_2:+1849902 | Msa0748610:CDS |
| TTGCTTGGTGATTTCTTCAC+TGG | 0.366646 | 5_2:-1849628 | None:intergenic |
| AGCAAAGAGAGATTATTTAC+AGG | 0.366908 | 5_2:+1851673 | Msa0748610:CDS |
| TTGATGTTTGGATCCTTTGA+TGG | 0.368156 | 5_2:-1849422 | None:intergenic |
| TCAACTGATTCTTGTTTGCT+TGG | 0.368635 | 5_2:-1849643 | None:intergenic |
| ATCAGTGCTACAACCATTTC+AGG | 0.373611 | 5_2:-1850458 | None:intergenic |
| AAAAGGAGGGAGCAGGAAAA+TGG | 0.374679 | 5_2:+1848816 | Msa0748610:CDS |
| ACCTCTCACTGGATTATTTG+TGG | 0.376104 | 5_2:-1851951 | None:intergenic |
| GCTGCCTTCCCCTTCTTTCA+AGG | 0.376152 | 5_2:-1851844 | None:intergenic |
| CAACCTGAAACTGAAATCAT+AGG | 0.378498 | 5_2:-1851894 | None:intergenic |
| ATATCGAAAACTAGAGATAT+TGG | 0.379801 | 5_2:+1849978 | Msa0748610:CDS |
| CAGAGCACACACCACTCTTC+AGG | 0.383282 | 5_2:+1848186 | Msa0748610:CDS |
| AAGCAGGAAAAGATGGAAAA+AGG | 0.383928 | 5_2:+1848799 | Msa0748610:intron |
| ACTTGGAATCTTTGTTGGAT+TGG | 0.390859 | 5_2:+1851774 | Msa0748610:CDS |
| TTTGGAATGGTCTGAACCTT+TGG | 0.394809 | 5_2:+1850957 | Msa0748610:CDS |
| TCCATATTCAAGGACAATCT+AGG | 0.414001 | 5_2:+1849912 | Msa0748610:CDS |
| AAAGGACTTGGAATCTTTGT+TGG | 0.415429 | 5_2:+1851769 | Msa0748610:CDS |
| TGTGGCTGAAGTTGCGGTAT+TGG | 0.415617 | 5_2:+1849276 | Msa0748610:CDS |
| AGGGCGTCGAGAAAGGAAAA+TGG | 0.421258 | 5_2:+1848861 | Msa0748610:CDS |
| GATATTGAACAGATACCATA+TGG | 0.422044 | 5_2:-1849960 | None:intergenic |
| GCTTCCTTTCTCAGTTCAAC+AGG | 0.438309 | 5_2:-1851812 | None:intergenic |
| TGCAGATCACGTGAAGTTGC+AGG | 0.442494 | 5_2:+1849672 | Msa0748610:CDS |
| TAACAATACTACAGCAGAAA+AGG | 0.445312 | 5_2:-1848113 | None:intergenic |
| TCCAAAATGCAAGTTTCTCC+TGG | 0.448612 | 5_2:-1850218 | None:intergenic |
| AAGAGAAATCTGAGGCCTAA+TGG | 0.449344 | 5_2:-1849485 | None:intergenic |
| ACAAAATTCATCAGACGATA+AGG | 0.452744 | 5_2:+1849812 | Msa0748610:CDS |
| ATAAGGTGTTAGAAGTTGAT+AGG | 0.456293 | 5_2:+1849829 | Msa0748610:CDS |
| AGCTTAATTCTACAACCATT+AGG | 0.459006 | 5_2:+1849470 | Msa0748610:CDS |
| AAGTAATGTTTCCTTTGATA+GGG | 0.461447 | 5_2:+1852060 | Msa0748610:three_prime_UTR |
| TCTAGTAGAAAGCTAGTCAA+TGG | 0.462544 | 5_2:+1849520 | Msa0748610:CDS |
| TGCAGGTTGATAAGTTAAAG+AGG | 0.463381 | 5_2:+1848983 | Msa0748610:intron |
| ACTTGCCTCTGTGAACTTGA+AGG | 0.469270 | 5_2:+1850185 | Msa0748610:CDS |
| CAGTTGAATGCCTTGAAAGA+AGG | 0.473839 | 5_2:+1851834 | Msa0748610:CDS |
| TTGCACTATCTTGTGGAAGC+TGG | 0.481719 | 5_2:+1850986 | Msa0748610:CDS |
| ATGTGCAAAGCAGGAAAAGA+TGG | 0.484944 | 5_2:+1848792 | Msa0748610:intron |
| ACTCGACTTTGCAAAGGACT+TGG | 0.489476 | 5_2:+1851757 | Msa0748610:CDS |
| TTGATGGAATTCTGGTCCAT+CGG | 0.493905 | 5_2:-1849406 | None:intergenic |
| GGTGGTTCGATTAGAAGAGA+AGG | 0.495299 | 5_2:+1849306 | Msa0748610:CDS |
| CTTACATGGGAAGGGAGATA+AGG | 0.496981 | 5_2:-1849087 | None:intergenic |
| TGATGGAATTCTGGTCCATC+GGG | 0.498652 | 5_2:-1849405 | None:intergenic |
| TATAGTACAATTCATGGAGC+GGG | 0.499634 | 5_2:-1847984 | None:intergenic |
| ACATTAACAGCACCTCTCAC+TGG | 0.505947 | 5_2:-1851962 | None:intergenic |
| CTTTCATTAGTCATTATATG+AGG | 0.506223 | 5_2:+1847846 | Msa0748610:five_prime_UTR |
| GTTACATTTGCACTATCTTG+TGG | 0.506373 | 5_2:+1850979 | Msa0748610:CDS |
| AGTTGAATGCCTTGAAAGAA+GGG | 0.509505 | 5_2:+1851835 | Msa0748610:CDS |
| CTAGTAGAAAGCTAGTCAAT+GGG | 0.511137 | 5_2:+1849521 | Msa0748610:CDS |
| ACACCTCCACGTGATCCATA+TGG | 0.511970 | 5_2:+1849945 | Msa0748610:CDS |
| ACAACCATTTCAGGACTCTC+AGG | 0.512777 | 5_2:-1850449 | None:intergenic |
| GAGGCATATTTGGTTTGGAA+TGG | 0.523893 | 5_2:+1850944 | Msa0748610:CDS |
| GGGAGATAAGGAGGAAGACG+AGG | 0.525815 | 5_2:-1849075 | None:intergenic |
| GCTACCTGTTGAACTGAGAA+AGG | 0.530299 | 5_2:+1851808 | Msa0748610:CDS |
| TTTCATTCGGTTGAAATCAA+CGG | 0.530335 | 5_2:-1850036 | None:intergenic |
| CTTAATCTACTTACATGGGA+AGG | 0.531642 | 5_2:-1849096 | None:intergenic |
| GATTATTTACAGGCAGCAGT+TGG | 0.534652 | 5_2:+1851683 | Msa0748610:CDS |
| TTGCTTGTACACCAGTAACC+TGG | 0.536984 | 5_2:+1851914 | Msa0748610:exon |
| TAATTCCAAAGATACTTGAC+TGG | 0.540269 | 5_2:+1851729 | Msa0748610:CDS |
| CTTGTGTAAAGTACCAATAT+GGG | 0.540704 | 5_2:-1847809 | None:intergenic |
| GTATCTTACATTCATCATAC+AGG | 0.540740 | 5_2:-1850256 | None:intergenic |
| GGCTGAAGTTGCGGTATTGG+AGG | 0.545349 | 5_2:+1849279 | Msa0748610:CDS |
| CATACCTGAGAGTCCTGAAA+TGG | 0.549579 | 5_2:+1850445 | Msa0748610:CDS |
| CTTGAAGGGTCTTACTCACC+AGG | 0.555043 | 5_2:+1850200 | Msa0748610:CDS |
| TCGGTTGAAATCAACGGTGG+AGG | 0.556026 | 5_2:-1850030 | None:intergenic |
| GACCTTATTGCAGTTTACAA+AGG | 0.556891 | 5_2:-1852089 | None:intergenic |
| AACCTGAAACTGAAATCATA+GGG | 0.561621 | 5_2:-1851893 | None:intergenic |
| CGAAAATTCGATTGACCCGA+TGG | 0.561722 | 5_2:+1849390 | Msa0748610:CDS |
| TTGTAGGCATATTTAGAGCA+TGG | 0.564337 | 5_2:+1850422 | Msa0748610:intron |
| AGAGCTTGTGGCTGAAGTTG+CGG | 0.570036 | 5_2:+1849270 | Msa0748610:CDS |
| AGTTGCGGTATTGGAGGAAG+AGG | 0.573287 | 5_2:+1849285 | Msa0748610:CDS |
| AGACGAGGAAGTGCTCCTAA+AGG | 0.579607 | 5_2:-1849060 | None:intergenic |
| TCAGTTCAACAGGTAGCTGA+AGG | 0.581607 | 5_2:-1851802 | None:intergenic |
| ATATGTACCATGTGTGAAAG+AGG | 0.585157 | 5_2:-1851866 | None:intergenic |
| CTTGCCTCTGTGAACTTGAA+GGG | 0.587168 | 5_2:+1850186 | Msa0748610:CDS |
| AAAGGTCAAAACCCTATCAA+AGG | 0.588642 | 5_2:-1852071 | None:intergenic |
| TGCGGTATTGGAGGAAGAGG+TGG | 0.595764 | 5_2:+1849288 | Msa0748610:CDS |
| AATGATGAGATGAAAGCAAG+AGG | 0.596232 | 5_2:+1850925 | Msa0748610:CDS |
| TTAATCTACTTACATGGGAA+GGG | 0.597323 | 5_2:-1849095 | None:intergenic |
| CAGATACCATATGGATCACG+TGG | 0.601566 | 5_2:-1849951 | None:intergenic |
| GACACCAAATAGAGTTTCAG+AGG | 0.605334 | 5_2:+1849851 | Msa0748610:CDS |
| CTGTCTACATTTCCTCCAAG+AGG | 0.607010 | 5_2:+1849362 | Msa0748610:CDS |
| CATGGTGAAAACAAATGAGA+AGG | 0.607667 | 5_2:-1847904 | None:intergenic |
| ATGGACCAGAATTCCATCAA+AGG | 0.609091 | 5_2:+1849409 | Msa0748610:CDS |
| TCAAAGGATCCAAACATCAA+AGG | 0.609297 | 5_2:+1849425 | Msa0748610:CDS |
| ATGCTTACTGCTAAGTGCGA+AGG | 0.612958 | 5_2:-1852139 | None:intergenic |
| GATAGTGCAAATGTAACCAA+AGG | 0.614690 | 5_2:-1850973 | None:intergenic |
| CATTCGGTTGAAATCAACGG+TGG | 0.616978 | 5_2:-1850033 | None:intergenic |
| TGGAAGCTGGTCATCACCTG+TGG | 0.626198 | 5_2:+1850999 | Msa0748610:CDS |
| TTATAGTACAATTCATGGAG+CGG | 0.642892 | 5_2:-1847985 | None:intergenic |
| ACATGGGAAGGGAGATAAGG+AGG | 0.643159 | 5_2:-1849084 | None:intergenic |
| TTGATTGATTACCTGAAGAG+TGG | 0.645456 | 5_2:-1848197 | None:intergenic |
| GTAATCTACAAAGCATAACA+AGG | 0.653610 | 5_2:-1850842 | None:intergenic |
| AAGGTTGTGAATTTCAGACA+AGG | 0.655478 | 5_2:+1849325 | Msa0748610:CDS |
| GGTTGTAGCACTGATGCAGA+AGG | 0.659494 | 5_2:+1850466 | Msa0748610:CDS |
| ACCACAAATAATCCAGTGAG+AGG | 0.668723 | 5_2:+1851950 | Msa0748610:three_prime_UTR |
| GTTGAATGCCTTGAAAGAAG+GGG | 0.670351 | 5_2:+1851836 | Msa0748610:CDS |
| AATGCCTTGAAAGAAGGGGA+AGG | 0.676784 | 5_2:+1851840 | Msa0748610:CDS |
| AAGGCAGCCTCTTTCACACA+TGG | 0.686885 | 5_2:+1851859 | Msa0748610:CDS |
| CTTCTGGCAAGAGAAATCTG+AGG | 0.757425 | 5_2:-1849493 | None:intergenic |
| ATACCATATGGATCACGTGG+AGG | 0.760579 | 5_2:-1849948 | None:intergenic |
| AAGACCCTTCAAGTTCACAG+AGG | 0.790606 | 5_2:-1850190 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATCAATGTATTTATTA+AGG | + | chr5_2:1851560-1851579 | Msa0748610:intron | 10.0% |
| !! | AAATAATACAAAAACAAAAA+AGG | + | chr5_2:1852217-1852236 | Msa0748610:three_prime_UTR | 10.0% |
| !! | AATAATACAAAAACAAAAAA+GGG | + | chr5_2:1852218-1852237 | Msa0748610:three_prime_UTR | 10.0% |
| !! | TAAAGAGAAAGAAAAAAAAT+AGG | - | chr5_2:1848255-1848274 | None:intergenic | 15.0% |
| !!! | ATTTTTTTTCTTTCTCTTTA+TGG | + | chr5_2:1848255-1848274 | Msa0748610:intron | 15.0% |
| !! | GAAAAACAAATAAAGAAAAT+TGG | - | chr5_2:1848281-1848300 | None:intergenic | 15.0% |
| !! | AATTGAGAAAAATAAGAAAT+TGG | + | chr5_2:1848586-1848605 | Msa0748610:intron | 15.0% |
| !! | AATGCTTATCTAAATATAAT+TGG | - | chr5_2:1850644-1850663 | None:intergenic | 15.0% |
| !!! | ACATTAACTATTTTCTTTTT+CGG | + | chr5_2:1851063-1851082 | Msa0748610:intron | 15.0% |
| !!! | TATATATGAAAATTTGTTTC+AGG | + | chr5_2:1851145-1851164 | Msa0748610:intron | 15.0% |
| !!! | ATATATGAAAATTTGTTTCA+GGG | + | chr5_2:1851146-1851165 | Msa0748610:intron | 15.0% |
| !!! | ATCTATCATAAATTTGTTAT+CGG | + | chr5_2:1851346-1851365 | Msa0748610:intron | 15.0% |
| !!! | TATTTTATTTTATGAAGGTA+AGG | + | chr5_2:1851612-1851631 | Msa0748610:intron | 15.0% |
| !!! | ATTTTATTTTATGAAGGTAA+GGG | + | chr5_2:1851613-1851632 | Msa0748610:intron | 15.0% |
| !! | ATAATACAAAAACAAAAAAG+GGG | + | chr5_2:1852219-1852238 | Msa0748610:three_prime_UTR | 15.0% |
| !! | AAAAAAAATATGGAAGAACA+TGG | - | chr5_2:1847925-1847944 | None:intergenic | 20.0% |
| !!! | AGATTTTATAGTACAATTCA+TGG | - | chr5_2:1847993-1848012 | None:intergenic | 20.0% |
| !! | ATCAAAATTCCTTCAAAAAA+CGG | + | chr5_2:1848215-1848234 | Msa0748610:intron | 20.0% |
| !!! | TTTCTCATGTTTTTTTTTGT+TGG | + | chr5_2:1848350-1848369 | Msa0748610:intron | 20.0% |
| !!! | CACATAATACTTTGAAAAAA+GGG | + | chr5_2:1848842-1848861 | Msa0748610:CDS | 20.0% |
| !! | GAAATCTATTGAAAAGAAAA+TGG | + | chr5_2:1849591-1849610 | Msa0748610:CDS | 20.0% |
| !! | TCGATTAAAGTAAGTTATAA+AGG | + | chr5_2:1850079-1850098 | Msa0748610:intron | 20.0% |
| !! | CGATTAAAGTAAGTTATAAA+GGG | + | chr5_2:1850080-1850099 | Msa0748610:intron | 20.0% |
| !! | CAATTATTTGGTTATATTGT+AGG | + | chr5_2:1850406-1850425 | Msa0748610:intron | 20.0% |
| !!! | ATTTTCATATATACTAGTCA+AGG | - | chr5_2:1851138-1851157 | None:intergenic | 20.0% |
| !!! | TCTATCATAAATTTGTTATC+GGG | + | chr5_2:1851347-1851366 | Msa0748610:intron | 20.0% |
| !! | AAAATTAGAAAAGTGGAAAT+TGG | - | chr5_2:1851491-1851510 | None:intergenic | 20.0% |
| !! | ATAGTTATCATTCTTAATGT+GGG | + | chr5_2:1851530-1851549 | Msa0748610:intron | 20.0% |
| !!! | AATGTATTTATTAAGGCATT+TGG | + | chr5_2:1851567-1851586 | Msa0748610:intron | 20.0% |
| !! | ATTACAGTCTGTAAAAAAAA+AGG | - | chr5_2:1852114-1852133 | None:intergenic | 20.0% |
| !!! | TTTTTTTACAGACTGTAATA+AGG | + | chr5_2:1852115-1852134 | Msa0748610:three_prime_UTR | 20.0% |
| !! | TAATACAAAAACAAAAAAGG+GGG | + | chr5_2:1852220-1852239 | Msa0748610:three_prime_UTR | 20.0% |
| ! | CTTTCATTAGTCATTATATG+AGG | + | chr5_2:1847846-1847865 | Msa0748610:five_prime_UTR | 25.0% |
| !! | TGTTTTTCTGTTTGATTGTA+AGG | + | chr5_2:1848293-1848312 | Msa0748610:intron | 25.0% |
| ! | AAGAAACAAATGACCATTTA+AGG | + | chr5_2:1848320-1848339 | Msa0748610:intron | 25.0% |
| !!! | TAAGTGTTACTTTAACAGTT+AGG | + | chr5_2:1848629-1848648 | Msa0748610:intron | 25.0% |
| ! | AAATGAGAAAGAAAGATAGA+AGG | - | chr5_2:1848728-1848747 | None:intergenic | 25.0% |
| !! | GCACATAATACTTTGAAAAA+AGG | + | chr5_2:1848841-1848860 | Msa0748610:CDS | 25.0% |
| ! | GTAGAACAATTAATAATGCA+AGG | - | chr5_2:1848917-1848936 | None:intergenic | 25.0% |
| ! | ATGCATTGAATACAATTGAT+CGG | - | chr5_2:1849156-1849175 | None:intergenic | 25.0% |
| ! | TCAATTGTATTCAATGCATT+TGG | + | chr5_2:1849157-1849176 | Msa0748610:intron | 25.0% |
| !! | TTTTCAATAGATTTCTCTTC+TGG | - | chr5_2:1849586-1849605 | None:intergenic | 25.0% |
| ! | GCACATCAAATAGTAATTAT+TGG | - | chr5_2:1849711-1849730 | None:intergenic | 25.0% |
| ! | TATGAGAATTTCCATATTCA+AGG | + | chr5_2:1849902-1849921 | Msa0748610:CDS | 25.0% |
| ! | ATATCGAAAACTAGAGATAT+TGG | + | chr5_2:1849978-1849997 | Msa0748610:CDS | 25.0% |
| ! | AATCTCACAAAAACTATTGT+AGG | - | chr5_2:1850006-1850025 | None:intergenic | 25.0% |
| !! | GAAACACTGAATTTTTCATT+CGG | - | chr5_2:1850052-1850071 | None:intergenic | 25.0% |
| !!! | CTTTTTGTTGATTCTACATA+TGG | + | chr5_2:1850110-1850129 | Msa0748610:intron | 25.0% |
| ! | CTTACATAATTCAAGTGATA+AGG | - | chr5_2:1850767-1850786 | None:intergenic | 25.0% |
| ! | TAGATGAAAATATTGTTCTG+TGG | + | chr5_2:1851040-1851059 | Msa0748610:intron | 25.0% |
| ! | CATAGTTATCATTCTTAATG+TGG | + | chr5_2:1851529-1851548 | Msa0748610:intron | 25.0% |
| !! | ATTTTTGAACTTTGATGTTC+TGG | + | chr5_2:1851998-1852017 | Msa0748610:three_prime_UTR | 25.0% |
| !!! | ATGTTCTGGATTTTGTATAT+TGG | + | chr5_2:1852012-1852031 | Msa0748610:three_prime_UTR | 25.0% |
| ! | AAGTAATGTTTCCTTTGATA+GGG | + | chr5_2:1852060-1852079 | Msa0748610:three_prime_UTR | 25.0% |
| ! | CTTGTGTAAAGTACCAATAT+GGG | - | chr5_2:1847812-1847831 | None:intergenic | 30.0% |
| TTATAGTACAATTCATGGAG+CGG | - | chr5_2:1847988-1848007 | None:intergenic | 30.0% | |
| ! | CTCTGTTGTTTGTGAATTAT+TGG | + | chr5_2:1848031-1848050 | Msa0748610:five_prime_UTR | 30.0% |
| TAACAATACTACAGCAGAAA+AGG | - | chr5_2:1848116-1848135 | None:intergenic | 30.0% | |
| !!! | TTTCTTGTTTTGTGTGAAAG+TGG | + | chr5_2:1848151-1848170 | Msa0748610:five_prime_UTR | 30.0% |
| !!! | AATAGTTTGCCGTTTTTTGA+AGG | - | chr5_2:1848227-1848246 | None:intergenic | 30.0% |
| ! | AAATGACCATTTAAGGTTGT+TGG | + | chr5_2:1848327-1848346 | Msa0748610:intron | 30.0% |
| !!! | AACCACTTGGTTTTGAATAT+AGG | + | chr5_2:1848519-1848538 | Msa0748610:intron | 30.0% |
| AAGAACATAGTTCTCAGATT+TGG | - | chr5_2:1848670-1848689 | None:intergenic | 30.0% | |
| TTAATCTACTTACATGGGAA+GGG | - | chr5_2:1849098-1849117 | None:intergenic | 30.0% | |
| CTGACTTAATCTACTTACAT+GGG | - | chr5_2:1849103-1849122 | None:intergenic | 30.0% | |
| ! | ACTGACTTAATCTACTTACA+TGG | - | chr5_2:1849104-1849123 | None:intergenic | 30.0% |
| ! | ATTTTAGACATTAGAGCTTG+TGG | + | chr5_2:1849258-1849277 | Msa0748610:intron | 30.0% |
| TTTCAGACAAGGTTTATATC+AGG | + | chr5_2:1849336-1849355 | Msa0748610:CDS | 30.0% | |
| !! | TGATTTTGACCTTTGATGTT+TGG | - | chr5_2:1849437-1849456 | None:intergenic | 30.0% |
| AGCTTAATTCTACAACCATT+AGG | + | chr5_2:1849470-1849489 | Msa0748610:CDS | 30.0% | |
| !! | TTTTGTTTCGATTAATCAGC+TGG | + | chr5_2:1849761-1849780 | Msa0748610:intron | 30.0% |
| ACAAAATTCATCAGACGATA+AGG | + | chr5_2:1849812-1849831 | Msa0748610:CDS | 30.0% | |
| ! | ATAAGGTGTTAGAAGTTGAT+AGG | + | chr5_2:1849829-1849848 | Msa0748610:CDS | 30.0% |
| !! | ATATCCTCTGAAACTCTATT+TGG | - | chr5_2:1849858-1849877 | None:intergenic | 30.0% |
| GATATTGAACAGATACCATA+TGG | - | chr5_2:1849963-1849982 | None:intergenic | 30.0% | |
| TTTCATTCGGTTGAAATCAA+CGG | - | chr5_2:1850039-1850058 | None:intergenic | 30.0% | |
| !! | ACATGTCCAGGTTTTTATTT+GGG | + | chr5_2:1850160-1850179 | Msa0748610:intron | 30.0% |
| AAGTTTCCCAAATAAAAACC+TGG | - | chr5_2:1850169-1850188 | None:intergenic | 30.0% | |
| GTATCTTACATTCATCATAC+AGG | - | chr5_2:1850259-1850278 | None:intergenic | 30.0% | |
| ! | CTAAAAGAGTTGTCTTTTTG+AGG | + | chr5_2:1850320-1850339 | Msa0748610:intron | 30.0% |
| TTGAGGTGACTACAATTATT+TGG | + | chr5_2:1850394-1850413 | Msa0748610:intron | 30.0% | |
| ! | ATTGACATGAATGGATTTCT+TGG | + | chr5_2:1850600-1850619 | Msa0748610:intron | 30.0% |
| GTAATCTACAAAGCATAACA+AGG | - | chr5_2:1850845-1850864 | None:intergenic | 30.0% | |
| !!! | ATTTTTTGCAGCTTTTAGAC+AGG | - | chr5_2:1850908-1850927 | None:intergenic | 30.0% |
| GATGATCACATAAGACATTA+AGG | - | chr5_2:1851094-1851113 | None:intergenic | 30.0% | |
| GCTGAGAATTGAAATAATCT+AGG | + | chr5_2:1851188-1851207 | Msa0748610:intron | 30.0% | |
| ! | CAAGTTACAAGTCAGTTTTT+AGG | - | chr5_2:1851282-1851301 | None:intergenic | 30.0% |
| !! | AAACTGACTTGTAACTTGTA+AGG | + | chr5_2:1851284-1851303 | Msa0748610:intron | 30.0% |
| GCTAGTGAAAATTAGAAAAG+TGG | - | chr5_2:1851498-1851517 | None:intergenic | 30.0% | |
| ! | CTTTTCTAATTTTCACTAGC+AGG | + | chr5_2:1851498-1851517 | Msa0748610:intron | 30.0% |
| AGCAAAGAGAGATTATTTAC+AGG | + | chr5_2:1851673-1851692 | Msa0748610:CDS | 30.0% | |
| TAATTCCAAAGATACTTGAC+TGG | + | chr5_2:1851729-1851748 | Msa0748610:CDS | 30.0% | |
| AAAAACCAGTCAAGTATCTT+TGG | - | chr5_2:1851737-1851756 | None:intergenic | 30.0% | |
| AACCTGAAACTGAAATCATA+GGG | - | chr5_2:1851896-1851915 | None:intergenic | 30.0% | |
| CAAGTAATGTTTCCTTTGAT+AGG | + | chr5_2:1852059-1852078 | Msa0748610:three_prime_UTR | 30.0% | |
| ! | GCAGTAAGCATAGATTTTAT+AGG | + | chr5_2:1852151-1852170 | Msa0748610:three_prime_UTR | 30.0% |
| !!! | TCATATTTTGATGCGATCAT+GGG | - | chr5_2:1852185-1852204 | None:intergenic | 30.0% |
| ! | GCTTGTGTAAAGTACCAATA+TGG | - | chr5_2:1847813-1847832 | None:intergenic | 35.0% |
| CATGGTGAAAACAAATGAGA+AGG | - | chr5_2:1847907-1847926 | None:intergenic | 35.0% | |
| GCGGGAAAAAGAAGAAAAAA+TGG | - | chr5_2:1847969-1847988 | None:intergenic | 35.0% | |
| TATAGTACAATTCATGGAGC+GGG | - | chr5_2:1847987-1848006 | None:intergenic | 35.0% | |
| TTGATTGATTACCTGAAGAG+TGG | - | chr5_2:1848200-1848219 | None:intergenic | 35.0% | |
| GAGAAACCAACAACCTTAAA+TGG | - | chr5_2:1848336-1848355 | None:intergenic | 35.0% | |
| !!! | TTTTTGTTGGTCTTACCCTT+CGG | + | chr5_2:1848363-1848382 | Msa0748610:intron | 35.0% |
| TGGAGATGATAAGTAAAGAC+TGG | + | chr5_2:1848412-1848431 | Msa0748610:intron | 35.0% | |
| ACTACTTAAGTCTAACCACT+TGG | + | chr5_2:1848506-1848525 | Msa0748610:intron | 35.0% | |
| AGCCTATATTCAAAACCAAG+TGG | - | chr5_2:1848524-1848543 | None:intergenic | 35.0% | |
| GAGAAAGAAAGATAGAAGGA+AGG | - | chr5_2:1848724-1848743 | None:intergenic | 35.0% | |
| AAGCAGGAAAAGATGGAAAA+AGG | + | chr5_2:1848799-1848818 | Msa0748610:intron | 35.0% | |
| AGGAAAAGATGGAAAAAGGA+GGG | + | chr5_2:1848803-1848822 | Msa0748610:intron | 35.0% | |
| !! | TGCAGGTTGATAAGTTAAAG+AGG | + | chr5_2:1848983-1849002 | Msa0748610:intron | 35.0% |
| CTTAATCTACTTACATGGGA+AGG | - | chr5_2:1849099-1849118 | None:intergenic | 35.0% | |
| AAGGTTGTGAATTTCAGACA+AGG | + | chr5_2:1849325-1849344 | Msa0748610:CDS | 35.0% | |
| TTGATGTTTGGATCCTTTGA+TGG | - | chr5_2:1849425-1849444 | None:intergenic | 35.0% | |
| TCAAAGGATCCAAACATCAA+AGG | + | chr5_2:1849425-1849444 | Msa0748610:CDS | 35.0% | |
| TCTAGTAGAAAGCTAGTCAA+TGG | + | chr5_2:1849520-1849539 | Msa0748610:CDS | 35.0% | |
| CTAGTAGAAAGCTAGTCAAT+GGG | + | chr5_2:1849521-1849540 | Msa0748610:CDS | 35.0% | |
| !! | TGAAGATAAGGAGTCTTGTT+TGG | - | chr5_2:1849560-1849579 | None:intergenic | 35.0% |
| ! | CTCTTCTGGTATTGAAGATA+AGG | - | chr5_2:1849572-1849591 | None:intergenic | 35.0% |
| ! | TCAACTGATTCTTGTTTGCT+TGG | - | chr5_2:1849646-1849665 | None:intergenic | 35.0% |
| TCCATATTCAAGGACAATCT+AGG | + | chr5_2:1849912-1849931 | Msa0748610:CDS | 35.0% | |
| TCCTAGATTGTCCTTGAATA+TGG | - | chr5_2:1849916-1849935 | None:intergenic | 35.0% | |
| CTAATCTAAAAGACATGTCC+AGG | + | chr5_2:1850148-1850167 | Msa0748610:intron | 35.0% | |
| ! | GACATGTCCAGGTTTTTATT+TGG | + | chr5_2:1850159-1850178 | Msa0748610:intron | 35.0% |
| TTACCTTGCCTAATATGTTG+AGG | + | chr5_2:1850377-1850396 | Msa0748610:intron | 35.0% | |
| TGTAGTCACCTCAACATATT+AGG | - | chr5_2:1850388-1850407 | None:intergenic | 35.0% | |
| ! | TTGTAGGCATATTTAGAGCA+TGG | + | chr5_2:1850422-1850441 | Msa0748610:intron | 35.0% |
| CAAAAGCTGAGAACATTAGA+GGG | - | chr5_2:1850501-1850520 | None:intergenic | 35.0% | |
| ACAAAAGCTGAGAACATTAG+AGG | - | chr5_2:1850502-1850521 | None:intergenic | 35.0% | |
| GAAGCAAAGATGAATTGAGA+AGG | - | chr5_2:1850572-1850591 | None:intergenic | 35.0% | |
| CCATTCATGTCAATATGTGA+TGG | - | chr5_2:1850594-1850613 | None:intergenic | 35.0% | |
| CCATCACATATTGACATGAA+TGG | + | chr5_2:1850591-1850610 | Msa0748610:intron | 35.0% | |
| !! | CATTCGAGTTGACTAAAACT+TGG | + | chr5_2:1850660-1850679 | Msa0748610:intron | 35.0% |
| !! | AACTTGGTAATGTTTGTGAC+AGG | + | chr5_2:1850676-1850695 | Msa0748610:intron | 35.0% |
| AATGATGAGATGAAAGCAAG+AGG | + | chr5_2:1850925-1850944 | Msa0748610:CDS | 35.0% | |
| ! | ATGAAAGCAAGAGGCATATT+TGG | + | chr5_2:1850934-1850953 | Msa0748610:CDS | 35.0% |
| GATAGTGCAAATGTAACCAA+AGG | - | chr5_2:1850976-1850995 | None:intergenic | 35.0% | |
| GTTACATTTGCACTATCTTG+TGG | + | chr5_2:1850979-1850998 | Msa0748610:CDS | 35.0% | |
| TTGAGAAACAAACATACCAC+AGG | - | chr5_2:1851018-1851037 | None:intergenic | 35.0% | |
| ! | TGTTTCAGGGTGTTATGTAA+TGG | + | chr5_2:1851159-1851178 | Msa0748610:intron | 35.0% |
| TTAGGTCATATCTCAAGTGA+AGG | - | chr5_2:1851264-1851283 | None:intergenic | 35.0% | |
| !!! | CTTATTTTGATCCTACAAGC+CGG | + | chr5_2:1851402-1851421 | Msa0748610:intron | 35.0% |
| CCTATGATACCAAACAAAAC+CGG | - | chr5_2:1851424-1851443 | None:intergenic | 35.0% | |
| ! | AAGGCATTTGGTTGAATTGA+TGG | + | chr5_2:1851579-1851598 | Msa0748610:intron | 35.0% |
| ! | GTTTTTACTCGACTTTGCAA+AGG | + | chr5_2:1851751-1851770 | Msa0748610:CDS | 35.0% |
| AAAGGACTTGGAATCTTTGT+TGG | + | chr5_2:1851769-1851788 | Msa0748610:CDS | 35.0% | |
| ACTTGGAATCTTTGTTGGAT+TGG | + | chr5_2:1851774-1851793 | Msa0748610:CDS | 35.0% | |
| CTTGGAATCTTTGTTGGATT+GGG | + | chr5_2:1851775-1851794 | Msa0748610:CDS | 35.0% | |
| AGTTGAATGCCTTGAAAGAA+GGG | + | chr5_2:1851835-1851854 | Msa0748610:CDS | 35.0% | |
| ATATGTACCATGTGTGAAAG+AGG | - | chr5_2:1851869-1851888 | None:intergenic | 35.0% | |
| CAACCTGAAACTGAAATCAT+AGG | - | chr5_2:1851897-1851916 | None:intergenic | 35.0% | |
| !!! | ACCAGTAACCTGGTTTTTTT+TGG | + | chr5_2:1851924-1851943 | Msa0748610:exon | 35.0% |
| TCCAAAAAAAACCAGGTTAC+TGG | - | chr5_2:1851928-1851947 | None:intergenic | 35.0% | |
| AAAGGTCAAAACCCTATCAA+AGG | - | chr5_2:1852074-1852093 | None:intergenic | 35.0% | |
| GACCTTTGTAAACTGCAATA+AGG | + | chr5_2:1852087-1852106 | Msa0748610:three_prime_UTR | 35.0% | |
| GACCTTATTGCAGTTTACAA+AGG | - | chr5_2:1852092-1852111 | None:intergenic | 35.0% | |
| !!! | CTCATATTTTGATGCGATCA+TGG | - | chr5_2:1852186-1852205 | None:intergenic | 35.0% |
| ACAAAAACAAAAAAGGGGGT+TGG | + | chr5_2:1852224-1852243 | Msa0748610:three_prime_UTR | 35.0% | |
| GGACGATGTCTGTTTGTTTA+AGG | - | chr5_2:1847886-1847905 | None:intergenic | 40.0% | |
| AGTCTAAACTTGCGTACTTG+TGG | + | chr5_2:1848455-1848474 | Msa0748610:intron | 40.0% | |
| TCTCACTTAATGTGCAAAGC+AGG | + | chr5_2:1848783-1848802 | Msa0748610:intron | 40.0% | |
| ATGTGCAAAGCAGGAAAAGA+TGG | + | chr5_2:1848792-1848811 | Msa0748610:intron | 40.0% | |
| CAGGAAAAGATGGAAAAAGG+AGG | + | chr5_2:1848802-1848821 | Msa0748610:intron | 40.0% | |
| ! | TTATGCTGCTTGAAGTTTGC+AGG | + | chr5_2:1848966-1848985 | Msa0748610:intron | 40.0% |
| ! | CATCGGGTCAATCGAATTTT+CGG | - | chr5_2:1849392-1849411 | None:intergenic | 40.0% |
| TTGATGGAATTCTGGTCCAT+CGG | - | chr5_2:1849409-1849428 | None:intergenic | 40.0% | |
| ATGGACCAGAATTCCATCAA+AGG | + | chr5_2:1849409-1849428 | Msa0748610:CDS | 40.0% | |
| TGGATCCTTTGATGGAATTC+TGG | - | chr5_2:1849417-1849436 | None:intergenic | 40.0% | |
| ! | AAGAGAAATCTGAGGCCTAA+TGG | - | chr5_2:1849488-1849507 | None:intergenic | 40.0% |
| !! | CTTTCTACTAGAAGCACTTC+TGG | - | chr5_2:1849512-1849531 | None:intergenic | 40.0% |
| ! | TTGCTTGGTGATTTCTTCAC+TGG | - | chr5_2:1849631-1849650 | None:intergenic | 40.0% |
| GACACCAAATAGAGTTTCAG+AGG | + | chr5_2:1849851-1849870 | Msa0748610:CDS | 40.0% | |
| ! | ACCAGGAGAAACTTGCATTT+TGG | + | chr5_2:1850217-1850236 | Msa0748610:CDS | 40.0% |
| TCCAAAATGCAAGTTTCTCC+TGG | - | chr5_2:1850221-1850240 | None:intergenic | 40.0% | |
| TCACCTCAACATATTAGGCA+AGG | - | chr5_2:1850383-1850402 | None:intergenic | 40.0% | |
| ATCAGTGCTACAACCATTTC+AGG | - | chr5_2:1850461-1850480 | None:intergenic | 40.0% | |
| ! | AGCAAGAGGCATATTTGGTT+TGG | + | chr5_2:1850939-1850958 | Msa0748610:CDS | 40.0% |
| !! | GAGGCATATTTGGTTTGGAA+TGG | + | chr5_2:1850944-1850963 | Msa0748610:CDS | 40.0% |
| ! | TTTGGAATGGTCTGAACCTT+TGG | + | chr5_2:1850957-1850976 | Msa0748610:CDS | 40.0% |
| TCTCAAGTGAAGGTGAGATT+TGG | - | chr5_2:1851254-1851273 | None:intergenic | 40.0% | |
| !! | AAATTTGTTATCGGGCCACT+CGG | + | chr5_2:1851355-1851374 | Msa0748610:intron | 40.0% |
| ATTATCCAGCAAGGTACAGT+AGG | + | chr5_2:1851378-1851397 | Msa0748610:intron | 40.0% | |
| TTATCCAGCAAGGTACAGTA+GGG | + | chr5_2:1851379-1851398 | Msa0748610:intron | 40.0% | |
| !!! | CCGGTTTTGTTTGGTATCAT+AGG | + | chr5_2:1851421-1851440 | Msa0748610:intron | 40.0% |
| GATTATTTACAGGCAGCAGT+TGG | + | chr5_2:1851683-1851702 | Msa0748610:CDS | 40.0% | |
| CAGTTGAATGCCTTGAAAGA+AGG | + | chr5_2:1851834-1851853 | Msa0748610:CDS | 40.0% | |
| GTTGAATGCCTTGAAAGAAG+GGG | + | chr5_2:1851836-1851855 | Msa0748610:CDS | 40.0% | |
| TGCCCTATGATTTCAGTTTC+AGG | + | chr5_2:1851891-1851910 | Msa0748610:CDS | 40.0% | |
| GTGGTTGTCCAAAAAAAACC+AGG | - | chr5_2:1851935-1851954 | None:intergenic | 40.0% | |
| ACCACAAATAATCCAGTGAG+AGG | + | chr5_2:1851950-1851969 | Msa0748610:three_prime_UTR | 40.0% | |
| ACCTCTCACTGGATTATTTG+TGG | - | chr5_2:1851954-1851973 | None:intergenic | 40.0% | |
| ATTACGAGAGTCCGATTCCT+CGG | - | chr5_2:1848391-1848410 | None:intergenic | 45.0% | |
| GGAATCGGACTCTCGTAATT+TGG | + | chr5_2:1848392-1848411 | Msa0748610:intron | 45.0% | |
| AAAAGGAGGGAGCAGGAAAA+TGG | + | chr5_2:1848816-1848835 | Msa0748610:CDS | 45.0% | |
| !! | TGAAAAAAGGGCGTCGAGAA+AGG | + | chr5_2:1848854-1848873 | Msa0748610:CDS | 45.0% |
| ! | AGAGCACTCACTAGACCTTT+AGG | + | chr5_2:1849045-1849064 | Msa0748610:CDS | 45.0% |
| CTTACATGGGAAGGGAGATA+AGG | - | chr5_2:1849090-1849109 | None:intergenic | 45.0% | |
| GGTGGTTCGATTAGAAGAGA+AGG | + | chr5_2:1849306-1849325 | Msa0748610:CDS | 45.0% | |
| CTGTCTACATTTCCTCCAAG+AGG | + | chr5_2:1849362-1849381 | Msa0748610:CDS | 45.0% | |
| ! | ATTTTCGGCATTCCTCTTGG+AGG | - | chr5_2:1849377-1849396 | None:intergenic | 45.0% |
| ! | CGAATTTTCGGCATTCCTCT+TGG | - | chr5_2:1849380-1849399 | None:intergenic | 45.0% |
| CGAAAATTCGATTGACCCGA+TGG | + | chr5_2:1849390-1849409 | Msa0748610:CDS | 45.0% | |
| TGATGGAATTCTGGTCCATC+GGG | - | chr5_2:1849408-1849427 | None:intergenic | 45.0% | |
| CTTCTGGCAAGAGAAATCTG+AGG | - | chr5_2:1849496-1849515 | None:intergenic | 45.0% | |
| ATACCATATGGATCACGTGG+AGG | - | chr5_2:1849951-1849970 | None:intergenic | 45.0% | |
| CAGATACCATATGGATCACG+TGG | - | chr5_2:1849954-1849973 | None:intergenic | 45.0% | |
| CATTCGGTTGAAATCAACGG+TGG | - | chr5_2:1850036-1850055 | None:intergenic | 45.0% | |
| ACTTGCCTCTGTGAACTTGA+AGG | + | chr5_2:1850185-1850204 | Msa0748610:CDS | 45.0% | |
| CTTGCCTCTGTGAACTTGAA+GGG | + | chr5_2:1850186-1850205 | Msa0748610:CDS | 45.0% | |
| ! | AAGACCCTTCAAGTTCACAG+AGG | - | chr5_2:1850193-1850212 | None:intergenic | 45.0% |
| CATACCTGAGAGTCCTGAAA+TGG | + | chr5_2:1850445-1850464 | Msa0748610:CDS | 45.0% | |
| ACAACCATTTCAGGACTCTC+AGG | - | chr5_2:1850452-1850471 | None:intergenic | 45.0% | |
| TGACAGGCCACAATAGTAGT+GGG | + | chr5_2:1850692-1850711 | Msa0748610:intron | 45.0% | |
| ! | CTTTTAGACAGGTCTGTTGC+AGG | - | chr5_2:1850897-1850916 | None:intergenic | 45.0% |
| TTGCACTATCTTGTGGAAGC+TGG | + | chr5_2:1850986-1851005 | Msa0748610:CDS | 45.0% | |
| AAGCGCTAAGCATAACTGTG+TGG | + | chr5_2:1851218-1851237 | Msa0748610:intron | 45.0% | |
| !!! | TCCTACAAGCCGGTTTTGTT+TGG | + | chr5_2:1851412-1851431 | Msa0748610:intron | 45.0% |
| !! | ACCAAACAAAACCGGCTTGT+AGG | - | chr5_2:1851416-1851435 | None:intergenic | 45.0% |
| ACTCGACTTTGCAAAGGACT+TGG | + | chr5_2:1851757-1851776 | Msa0748610:CDS | 45.0% | |
| TCAGTTCAACAGGTAGCTGA+AGG | - | chr5_2:1851805-1851824 | None:intergenic | 45.0% | |
| GCTACCTGTTGAACTGAGAA+AGG | + | chr5_2:1851808-1851827 | Msa0748610:CDS | 45.0% | |
| GCTTCCTTTCTCAGTTCAAC+AGG | - | chr5_2:1851815-1851834 | None:intergenic | 45.0% | |
| AATGCCTTGAAAGAAGGGGA+AGG | + | chr5_2:1851840-1851859 | Msa0748610:CDS | 45.0% | |
| TTGCTTGTACACCAGTAACC+TGG | + | chr5_2:1851914-1851933 | Msa0748610:exon | 45.0% | |
| ACATTAACAGCACCTCTCAC+TGG | - | chr5_2:1851965-1851984 | None:intergenic | 45.0% | |
| ATGCTTACTGCTAAGTGCGA+AGG | - | chr5_2:1852142-1852161 | None:intergenic | 45.0% | |
| !! | TACAAATAATAAAAAAAATA+TGG | - | chr5_2:1847935-1847954 | None:intergenic | 5.0% |
| !!! | ATATATATTTTATTTTATGA+AGG | + | chr5_2:1851607-1851626 | Msa0748610:intron | 5.0% |
| TTACGAGAGTCCGATTCCTC+GGG | - | chr5_2:1848390-1848409 | None:intergenic | 50.0% | |
| AGATGGAAAAAGGAGGGAGC+AGG | + | chr5_2:1848809-1848828 | Msa0748610:CDS | 50.0% | |
| !! | AGGGCGTCGAGAAAGGAAAA+TGG | + | chr5_2:1848861-1848880 | Msa0748610:CDS | 50.0% |
| !! | AGACGAGGAAGTGCTCCTAA+AGG | - | chr5_2:1849063-1849082 | None:intergenic | 50.0% |
| ACATGGGAAGGGAGATAAGG+AGG | - | chr5_2:1849087-1849106 | None:intergenic | 50.0% | |
| AGAGCTTGTGGCTGAAGTTG+CGG | + | chr5_2:1849270-1849289 | Msa0748610:CDS | 50.0% | |
| TGTGGCTGAAGTTGCGGTAT+TGG | + | chr5_2:1849276-1849295 | Msa0748610:CDS | 50.0% | |
| ! | AGTTGCGGTATTGGAGGAAG+AGG | + | chr5_2:1849285-1849304 | Msa0748610:CDS | 50.0% |
| TGCAGATCACGTGAAGTTGC+AGG | + | chr5_2:1849672-1849691 | Msa0748610:CDS | 50.0% | |
| ACACCTCCACGTGATCCATA+TGG | + | chr5_2:1849945-1849964 | Msa0748610:CDS | 50.0% | |
| TCGGTTGAAATCAACGGTGG+AGG | - | chr5_2:1850033-1850052 | None:intergenic | 50.0% | |
| CTTGAAGGGTCTTACTCACC+AGG | + | chr5_2:1850200-1850219 | Msa0748610:CDS | 50.0% | |
| !! | GGTTGTAGCACTGATGCAGA+AGG | + | chr5_2:1850466-1850485 | Msa0748610:CDS | 50.0% |
| GTGACAGGCCACAATAGTAG+TGG | + | chr5_2:1850691-1850710 | Msa0748610:intron | 50.0% | |
| GACAGGCCACAATAGTAGTG+GGG | + | chr5_2:1850693-1850712 | Msa0748610:intron | 50.0% | |
| ACAGGCCACAATAGTAGTGG+GGG | + | chr5_2:1850694-1850713 | Msa0748610:intron | 50.0% | |
| ACCTTGCTGGATAATCCGAG+TGG | - | chr5_2:1851373-1851392 | None:intergenic | 50.0% | |
| TAAGCCCTACTGTACCTTGC+TGG | - | chr5_2:1851386-1851405 | None:intergenic | 50.0% | |
| AAGGCAGCCTCTTTCACACA+TGG | + | chr5_2:1851859-1851878 | Msa0748610:CDS | 50.0% | |
| CAGAGCACACACCACTCTTC+AGG | + | chr5_2:1848186-1848205 | Msa0748610:CDS | 55.0% | |
| GGGAGATAAGGAGGAAGACG+AGG | - | chr5_2:1849078-1849097 | None:intergenic | 55.0% | |
| ! | GGCTGAAGTTGCGGTATTGG+AGG | + | chr5_2:1849279-1849298 | Msa0748610:CDS | 55.0% |
| ! | TGCGGTATTGGAGGAAGAGG+TGG | + | chr5_2:1849288-1849307 | Msa0748610:CDS | 55.0% |
| ! | CAGGCCACAATAGTAGTGGG+GGG | + | chr5_2:1850695-1850714 | Msa0748610:intron | 55.0% |
| GTGTCCCCCCACTACTATTG+TGG | - | chr5_2:1850702-1850721 | None:intergenic | 55.0% | |
| TGGAAGCTGGTCATCACCTG+TGG | + | chr5_2:1850999-1851018 | Msa0748610:CDS | 55.0% | |
| GCCACTCGGATTATCCAGCA+AGG | + | chr5_2:1851369-1851388 | Msa0748610:intron | 55.0% | |
| GCTGCCTTCCCCTTCTTTCA+AGG | - | chr5_2:1851847-1851866 | None:intergenic | 55.0% | |
| ACCCTTCGGTCCCGAGGAAT+CGG | + | chr5_2:1848377-1848396 | Msa0748610:intron | 60.0% | |
| TCCGATTCCTCGGGACCGAA+GGG | - | chr5_2:1848381-1848400 | None:intergenic | 60.0% | |
| AGTGGGGGGACACTTGCTCA+AGG | + | chr5_2:1850709-1850728 | Msa0748610:intron | 60.0% | |
| GGTCTTACCCTTCGGTCCCG+AGG | + | chr5_2:1848371-1848390 | Msa0748610:intron | 65.0% | |
| GTCCGATTCCTCGGGACCGA+AGG | - | chr5_2:1848382-1848401 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 1847803 | 1852248 | 1847803 | ID=Msa0748610;Name=Msa0748610 |
| chr5_2 | mRNA | 1847803 | 1852248 | 1847803 | ID=Msa0748610-mRNA-1;Parent=Msa0748610;Name=Msa0748610-mRNA-1;_AED=0.17;_eAED=0.19;_QI=375|0.87|0.88|1|0.87|0.88|9|317|539 |
| chr5_2 | exon | 1847803 | 1848207 | 1847803 | ID=Msa0748610-mRNA-1:exon:514;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1848805 | 1848897 | 1848805 | ID=Msa0748610-mRNA-1:exon:515;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1848988 | 1849104 | 1848988 | ID=Msa0748610-mRNA-1:exon:516;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1849265 | 1849693 | 1849265 | ID=Msa0748610-mRNA-1:exon:517;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1849780 | 1850087 | 1849780 | ID=Msa0748610-mRNA-1:exon:518;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1850170 | 1850269 | 1850170 | ID=Msa0748610-mRNA-1:exon:519;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1850428 | 1850487 | 1850428 | ID=Msa0748610-mRNA-1:exon:520;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1850841 | 1851020 | 1850841 | ID=Msa0748610-mRNA-1:exon:521;Parent=Msa0748610-mRNA-1 |
| chr5_2 | exon | 1851629 | 1852248 | 1851629 | ID=Msa0748610-mRNA-1:exon:522;Parent=Msa0748610-mRNA-1 |
| chr5_2 | five_prime_UTR | 1847803 | 1848177 | 1847803 | ID=Msa0748610-mRNA-1:five_prime_utr;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1848178 | 1848207 | 1848178 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1848805 | 1848897 | 1848805 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1848988 | 1849104 | 1848988 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1849265 | 1849693 | 1849265 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1849780 | 1850087 | 1849780 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1850170 | 1850269 | 1850170 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1850428 | 1850487 | 1850428 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1850841 | 1851020 | 1850841 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | CDS | 1851629 | 1851931 | 1851629 | ID=Msa0748610-mRNA-1:cds;Parent=Msa0748610-mRNA-1 |
| chr5_2 | three_prime_UTR | 1851932 | 1852248 | 1851932 | ID=Msa0748610-mRNA-1:three_prime_utr;Parent=Msa0748610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
