Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749140 | RHN53852.1 | 97.996 | 549 | 6 | 1 | 1 | 544 | 127 | 675 | 0.0 | 1113 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749140 | sp|Q9LQL2|PTR14_ARATH | 75.413 | 545 | 126 | 3 | 1 | 537 | 50 | 594 | 0.0 | 855 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749140 | A0A396HKH9 | 97.996 | 549 | 6 | 1 | 1 | 544 | 127 | 675 | 0.0 | 1113 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0749140 | 0.816005 | 6.911674e-52 | -8.615850e-47 |
| Msa0004990 | Msa0749140 | 0.800058 | 1.721991e-48 | -8.615850e-47 |
| Msa0044120 | Msa0749140 | 0.817184 | 3.762382e-52 | -8.615850e-47 |
| Msa0053040 | Msa0749140 | 0.804273 | 2.337937e-49 | -8.615850e-47 |
| Msa0098380 | Msa0749140 | 0.808810 | 2.579063e-50 | -8.615850e-47 |
| Msa0107830 | Msa0749140 | 0.818143 | 2.286176e-52 | -8.615850e-47 |
| Msa0614960 | Msa0749140 | 0.802182 | 6.333589e-49 | -8.615850e-47 |
| Msa0629030 | Msa0749140 | 0.855185 | 7.476113e-62 | -8.615850e-47 |
| Msa0629040 | Msa0749140 | 0.802223 | 6.211887e-49 | -8.615850e-47 |
| Msa0651820 | Msa0749140 | 0.800484 | 1.410440e-48 | -8.615850e-47 |
| Msa0652590 | Msa0749140 | 0.819346 | 1.218766e-52 | -8.615850e-47 |
| Msa0655370 | Msa0749140 | 0.807719 | 4.405151e-50 | -8.615850e-47 |
| Msa0657260 | Msa0749140 | 0.811137 | 8.137622e-51 | -8.615850e-47 |
| Msa0666580 | Msa0749140 | 0.855312 | 6.863147e-62 | -8.615850e-47 |
| Msa0699170 | Msa0749140 | 0.801562 | 8.490211e-49 | -8.615850e-47 |
| Msa0701490 | Msa0749140 | 0.813195 | 2.894540e-51 | -8.615850e-47 |
| Msa0701560 | Msa0749140 | 0.814197 | 1.741296e-51 | -8.615850e-47 |
| Msa0716620 | Msa0749140 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0727230 | Msa0749140 | 0.801893 | 7.261844e-49 | -8.615850e-47 |
| Msa0728520 | Msa0749140 | 0.806429 | 8.261021e-50 | -8.615850e-47 |
| Msa0743370 | Msa0749140 | 0.800628 | 1.318171e-48 | -8.615850e-47 |
| Msa0744710 | Msa0749140 | 0.801774 | 7.684713e-49 | -8.615850e-47 |
| Msa0747710 | Msa0749140 | 0.810649 | 1.037936e-50 | -8.615850e-47 |
| Msa0749140 | Msa0750790 | 0.829992 | 3.774568e-55 | -8.615850e-47 |
| Msa0749140 | Msa0750830 | 0.822650 | 2.115092e-53 | -8.615850e-47 |
| Msa0749140 | Msa0753410 | 0.816440 | 5.523017e-52 | -8.615850e-47 |
| Msa0749140 | Msa0772350 | 0.839851 | 1.237148e-57 | -8.615850e-47 |
| Msa0749140 | Msa0776540 | 0.803486 | 3.406747e-49 | -8.615850e-47 |
| Msa0749140 | Msa0792890 | 0.993915 | 3.650557e-203 | -8.615850e-47 |
| Msa0749140 | Msa0794200 | 0.837416 | 5.266794e-57 | -8.615850e-47 |
| Msa0749140 | Msa0794240 | 0.810366 | 1.194415e-50 | -8.615850e-47 |
| Msa0749140 | Msa0795320 | 0.822964 | 1.786698e-53 | -8.615850e-47 |
| Msa0749140 | Msa0795330 | 0.806085 | 9.761168e-50 | -8.615850e-47 |
| Msa0749140 | Msa0826240 | 0.808627 | 2.822758e-50 | -8.615850e-47 |
| Msa0749140 | Msa0826360 | 0.809675 | 1.682888e-50 | -8.615850e-47 |
| Msa0749140 | Msa0828910 | 0.992074 | 3.716439e-191 | -8.615850e-47 |
| Msa0749140 | Msa0865830 | 0.810952 | 8.924804e-51 | -8.615850e-47 |
| Msa0749140 | Msa0874750 | 0.832570 | 8.768515e-56 | -8.615850e-47 |
| Msa0749140 | Msa0910560 | 0.829405 | 5.242602e-55 | -8.615850e-47 |
| Msa0749140 | Msa0910590 | 0.830989 | 2.152633e-55 | -8.615850e-47 |
| Msa0749140 | Msa0948430 | 0.837622 | 4.662548e-57 | -8.615850e-47 |
| Msa0749140 | Msa0976400 | 0.850488 | 1.643566e-60 | -8.615850e-47 |
| Msa0749140 | Msa0985380 | 0.842779 | 2.098664e-58 | -8.615850e-47 |
| Msa0749140 | Msa1023430 | 0.846107 | 2.673300e-59 | -8.615850e-47 |
| Msa0749140 | Msa1035050 | 0.812790 | 3.550178e-51 | -8.615850e-47 |
| Msa0749140 | Msa1061840 | 0.826102 | 3.260666e-54 | -8.615850e-47 |
| Msa0749140 | Msa1069250 | 0.807784 | 4.268966e-50 | -8.615850e-47 |
| Msa0749140 | Msa1085820 | 0.839516 | 1.512287e-57 | -8.615850e-47 |
| Msa0749140 | Msa1107510 | 0.840631 | 7.742676e-58 | -8.615850e-47 |
| Msa0749140 | Msa1110900 | 0.807675 | 4.502007e-50 | -8.615850e-47 |
| Msa0749140 | Msa1151070 | 0.832824 | 7.581688e-56 | -8.615850e-47 |
| Msa0749140 | Msa1202110 | 0.804886 | 1.742069e-49 | -8.615850e-47 |
| Msa0749140 | Msa1254870 | 0.803561 | 3.287893e-49 | -8.615850e-47 |
| Msa0749140 | Msa1292560 | 0.808356 | 3.224958e-50 | -8.615850e-47 |
| Msa0749140 | Msa1328430 | 0.802568 | 5.273553e-49 | -8.615850e-47 |
| Msa0749140 | Msa1334000 | 0.800984 | 1.114934e-48 | -8.615850e-47 |
| Msa0749140 | Msa1349420 | 0.810500 | 1.117622e-50 | -8.615850e-47 |
| Msa0749140 | Msa1364690 | 0.820958 | 5.209007e-53 | -8.615850e-47 |
| Msa0749140 | Msa1369720 | 0.827104 | 1.880661e-54 | -8.615850e-47 |
| Msa0749140 | Msa1398120 | 0.817383 | 3.392119e-52 | -8.615850e-47 |
| Msa0749140 | Msa1437590 | 0.828404 | 9.162493e-55 | -8.615850e-47 |
| Msa0749140 | Msa1447140 | 0.801909 | 7.208430e-49 | -8.615850e-47 |
| Msa0749140 | Msa1453890 | 0.804298 | 2.310198e-49 | -8.615850e-47 |
| Msa0129290 | Msa0749140 | 0.843713 | 1.183217e-58 | -8.615850e-47 |
| Msa0183730 | Msa0749140 | 0.812865 | 3.419271e-51 | -8.615850e-47 |
| Msa0191470 | Msa0749140 | 0.800288 | 1.546279e-48 | -8.615850e-47 |
| Msa0196420 | Msa0749140 | 0.803573 | 3.268071e-49 | -8.615850e-47 |
| Msa0200090 | Msa0749140 | 0.832583 | 8.704323e-56 | -8.615850e-47 |
| Msa0238330 | Msa0749140 | 0.806255 | 8.988403e-50 | -8.615850e-47 |
| Msa0390200 | Msa0749140 | 0.814426 | 1.550135e-51 | -8.615850e-47 |
| Msa0421080 | Msa0749140 | 0.803221 | 3.865709e-49 | -8.615850e-47 |
| Msa0433090 | Msa0749140 | 0.830045 | 3.663274e-55 | -8.615850e-47 |
| Msa0267700 | Msa0749140 | 0.810375 | 1.189427e-50 | -8.615850e-47 |
| Msa0271700 | Msa0749140 | 0.822252 | 2.615841e-53 | -8.615850e-47 |
| Msa0271720 | Msa0749140 | 0.813343 | 2.685946e-51 | -8.615850e-47 |
| Msa0275730 | Msa0749140 | 0.803749 | 3.004352e-49 | -8.615850e-47 |
| Msa0320130 | Msa0749140 | 0.802753 | 4.830959e-49 | -8.615850e-47 |
| Msa0320140 | Msa0749140 | 0.807896 | 4.040261e-50 | -8.615850e-47 |
| Msa0524710 | Msa0749140 | 0.827607 | 1.425312e-54 | -8.615850e-47 |
| Msa0554770 | Msa0749140 | -0.800125 | 1.668657e-48 | -8.615850e-47 |
| Msa0561830 | Msa0749140 | 0.812032 | 5.200096e-51 | -8.615850e-47 |
| Msa0565120 | Msa0749140 | 0.804132 | 2.501839e-49 | -8.615850e-47 |
| Msa0588730 | Msa0749140 | 0.815447 | 9.202374e-52 | -8.615850e-47 |
| Msa0594250 | Msa0749140 | 0.802400 | 5.712594e-49 | -8.615850e-47 |
| Msa0597820 | Msa0749140 | 0.800290 | 1.544894e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749140 | MtrunA17_Chr5g0400371 | 97.996 | 549 | 6 | 1 | 1 | 544 | 127 | 675 | 0.0 | 1113 |
| Msa0749140 | MtrunA17_Chr4g0054891 | 80.328 | 549 | 98 | 2 | 1 | 544 | 125 | 668 | 0.0 | 921 |
| Msa0749140 | MtrunA17_Chr7g0217461 | 68.297 | 552 | 156 | 6 | 1 | 536 | 39 | 587 | 0.0 | 750 |
| Msa0749140 | MtrunA17_Chr1g0213711 | 60.958 | 543 | 197 | 7 | 1 | 538 | 36 | 568 | 0.0 | 664 |
| Msa0749140 | MtrunA17_Chr7g0214461 | 61.278 | 532 | 191 | 6 | 1 | 527 | 93 | 614 | 0.0 | 656 |
| Msa0749140 | MtrunA17_Chr7g0218851 | 59.091 | 550 | 203 | 8 | 1 | 538 | 61 | 600 | 0.0 | 639 |
| Msa0749140 | MtrunA17_Chr4g0011471 | 53.371 | 534 | 237 | 4 | 1 | 527 | 31 | 559 | 0.0 | 577 |
| Msa0749140 | MtrunA17_Chr4g0011041 | 47.850 | 535 | 267 | 5 | 1 | 527 | 51 | 581 | 8.96e-171 | 495 |
| Msa0749140 | MtrunA17_Chr8g0375311 | 43.691 | 531 | 288 | 5 | 1 | 525 | 55 | 580 | 6.71e-161 | 470 |
| Msa0749140 | MtrunA17_Chr3g0104011 | 43.879 | 531 | 284 | 6 | 1 | 524 | 37 | 560 | 6.61e-154 | 452 |
| Msa0749140 | MtrunA17_Chr8g0375351 | 43.503 | 531 | 289 | 5 | 1 | 525 | 55 | 580 | 6.69e-154 | 452 |
| Msa0749140 | MtrunA17_Chr8g0375341 | 42.750 | 531 | 293 | 5 | 1 | 525 | 55 | 580 | 2.13e-153 | 451 |
| Msa0749140 | MtrunA17_Chr8g0375291 | 43.454 | 527 | 287 | 5 | 1 | 521 | 55 | 576 | 1.21e-152 | 449 |
| Msa0749140 | MtrunA17_Chr7g0241741 | 42.561 | 531 | 291 | 6 | 1 | 525 | 37 | 559 | 1.74e-149 | 441 |
| Msa0749140 | MtrunA17_Chr4g0005901 | 41.825 | 526 | 300 | 4 | 1 | 524 | 47 | 568 | 5.74e-147 | 434 |
| Msa0749140 | MtrunA17_Chr8g0375321 | 41.620 | 531 | 299 | 5 | 1 | 525 | 52 | 577 | 1.78e-145 | 431 |
| Msa0749140 | MtrunA17_Chr8g0375331 | 41.431 | 531 | 300 | 5 | 1 | 525 | 39 | 564 | 3.80e-143 | 424 |
| Msa0749140 | MtrunA17_Chr8g0375361 | 43.429 | 525 | 286 | 5 | 7 | 525 | 60 | 579 | 1.12e-138 | 414 |
| Msa0749140 | MtrunA17_Chr7g0261811 | 38.274 | 533 | 310 | 7 | 1 | 524 | 42 | 564 | 2.42e-128 | 387 |
| Msa0749140 | MtrunA17_Chr3g0142101 | 37.591 | 548 | 308 | 10 | 1 | 538 | 50 | 573 | 1.69e-126 | 382 |
| Msa0749140 | MtrunA17_Chr1g0187241 | 36.278 | 532 | 320 | 6 | 2 | 524 | 42 | 563 | 8.53e-125 | 378 |
| Msa0749140 | MtrunA17_Chr7g0261771 | 36.330 | 534 | 317 | 7 | 2 | 524 | 47 | 568 | 9.06e-125 | 379 |
| Msa0749140 | MtrunA17_Chr7g0261881 | 35.150 | 532 | 326 | 6 | 2 | 524 | 43 | 564 | 3.32e-123 | 374 |
| Msa0749140 | MtrunA17_Chr3g0142091 | 37.383 | 535 | 307 | 8 | 1 | 525 | 41 | 557 | 1.35e-120 | 367 |
| Msa0749140 | MtrunA17_Chr5g0399061 | 38.321 | 548 | 318 | 10 | 2 | 536 | 43 | 583 | 6.81e-120 | 365 |
| Msa0749140 | MtrunA17_Chr1g0166791 | 35.810 | 525 | 322 | 5 | 7 | 524 | 45 | 561 | 4.24e-119 | 363 |
| Msa0749140 | MtrunA17_Chr7g0261791 | 37.429 | 529 | 309 | 8 | 7 | 524 | 50 | 567 | 1.51e-117 | 360 |
| Msa0749140 | MtrunA17_Chr3g0112671 | 36.604 | 530 | 308 | 10 | 7 | 528 | 54 | 563 | 3.28e-116 | 355 |
| Msa0749140 | MtrunA17_Chr5g0422881 | 36.577 | 555 | 335 | 10 | 1 | 544 | 35 | 583 | 3.92e-116 | 355 |
| Msa0749140 | MtrunA17_Chr1g0166711 | 35.484 | 558 | 336 | 7 | 2 | 544 | 41 | 589 | 8.16e-116 | 355 |
| Msa0749140 | MtrunA17_Chr1g0166741 | 35.361 | 526 | 320 | 5 | 7 | 526 | 48 | 559 | 5.09e-115 | 352 |
| Msa0749140 | MtrunA17_Chr5g0399071 | 36.612 | 549 | 332 | 7 | 1 | 538 | 40 | 583 | 6.32e-115 | 353 |
| Msa0749140 | MtrunA17_Chr1g0166771 | 35.953 | 509 | 306 | 5 | 7 | 509 | 12 | 506 | 2.13e-114 | 350 |
| Msa0749140 | MtrunA17_Chr4g0059991 | 34.758 | 538 | 335 | 6 | 1 | 525 | 37 | 571 | 4.98e-114 | 350 |
| Msa0749140 | MtrunA17_Chr7g0261851 | 38.710 | 527 | 304 | 6 | 7 | 524 | 49 | 565 | 9.20e-114 | 350 |
| Msa0749140 | MtrunA17_Chr4g0063591 | 39.139 | 534 | 301 | 9 | 2 | 525 | 38 | 557 | 1.40e-112 | 346 |
| Msa0749140 | MtrunA17_Chr7g0240381 | 35.472 | 530 | 316 | 10 | 7 | 528 | 50 | 561 | 1.34e-111 | 344 |
| Msa0749140 | MtrunA17_Chr4g0008651 | 35.094 | 530 | 324 | 11 | 7 | 528 | 55 | 572 | 2.73e-111 | 343 |
| Msa0749140 | MtrunA17_Chr4g0056431 | 37.064 | 545 | 326 | 11 | 7 | 538 | 46 | 586 | 1.65e-110 | 341 |
| Msa0749140 | MtrunA17_Chr4g0059981 | 33.690 | 561 | 348 | 10 | 1 | 541 | 46 | 602 | 1.01e-108 | 337 |
| Msa0749140 | MtrunA17_Chr4g0059971 | 34.015 | 538 | 338 | 8 | 1 | 525 | 49 | 582 | 1.14e-107 | 334 |
| Msa0749140 | MtrunA17_Chr3g0112611 | 33.395 | 539 | 339 | 9 | 7 | 537 | 53 | 579 | 6.51e-105 | 327 |
| Msa0749140 | MtrunA17_Chr7g0255601 | 34.062 | 549 | 345 | 10 | 1 | 537 | 42 | 585 | 2.55e-104 | 326 |
| Msa0749140 | MtrunA17_Chr5g0415791 | 34.186 | 547 | 340 | 10 | 1 | 532 | 44 | 585 | 6.57e-104 | 325 |
| Msa0749140 | MtrunA17_Chr7g0261661 | 37.856 | 457 | 270 | 5 | 72 | 524 | 4 | 450 | 1.09e-103 | 321 |
| Msa0749140 | MtrunA17_Chr7g0255621 | 32.907 | 547 | 352 | 10 | 1 | 538 | 35 | 575 | 5.58e-103 | 322 |
| Msa0749140 | MtrunA17_Chr3g0077151 | 37.002 | 527 | 288 | 10 | 7 | 524 | 49 | 540 | 7.72e-102 | 317 |
| Msa0749140 | MtrunA17_Chr3g0114501 | 33.700 | 546 | 336 | 11 | 2 | 535 | 38 | 569 | 2.27e-100 | 315 |
| Msa0749140 | MtrunA17_Chr8g0362781 | 31.343 | 536 | 354 | 5 | 1 | 524 | 45 | 578 | 3.79e-100 | 314 |
| Msa0749140 | MtrunA17_Chr4g0014791 | 35.632 | 522 | 305 | 9 | 8 | 524 | 51 | 546 | 1.33e-99 | 312 |
| Msa0749140 | MtrunA17_Chr4g0014841 | 35.755 | 523 | 305 | 9 | 7 | 524 | 50 | 546 | 3.72e-99 | 311 |
| Msa0749140 | MtrunA17_Chr1g0166731 | 36.659 | 461 | 281 | 4 | 66 | 524 | 7 | 458 | 1.61e-98 | 306 |
| Msa0749140 | MtrunA17_Chr4g0014871 | 34.652 | 531 | 303 | 11 | 7 | 524 | 51 | 550 | 3.12e-98 | 308 |
| Msa0749140 | MtrunA17_Chr4g0014801 | 35.496 | 524 | 307 | 10 | 7 | 524 | 50 | 548 | 1.53e-97 | 306 |
| Msa0749140 | MtrunA17_Chr7g0214731 | 33.579 | 542 | 336 | 9 | 1 | 525 | 76 | 610 | 3.18e-97 | 308 |
| Msa0749140 | MtrunA17_Chr1g0193391 | 32.620 | 561 | 332 | 11 | 3 | 538 | 34 | 573 | 1.22e-96 | 306 |
| Msa0749140 | MtrunA17_Chr5g0439381 | 35.769 | 520 | 305 | 7 | 10 | 521 | 52 | 550 | 1.77e-96 | 305 |
| Msa0749140 | MtrunA17_Chr2g0276751 | 34.463 | 531 | 316 | 9 | 2 | 524 | 54 | 560 | 2.28e-96 | 305 |
| Msa0749140 | MtrunA17_Chr7g0255611 | 31.444 | 547 | 361 | 8 | 1 | 538 | 44 | 585 | 2.67e-96 | 305 |
| Msa0749140 | MtrunA17_Chr8g0353031 | 33.272 | 541 | 332 | 10 | 8 | 538 | 40 | 561 | 2.08e-94 | 299 |
| Msa0749140 | MtrunA17_Chr4g0014781 | 34.733 | 524 | 311 | 9 | 7 | 524 | 50 | 548 | 2.53e-94 | 298 |
| Msa0749140 | MtrunA17_Chr2g0284701 | 31.927 | 545 | 354 | 8 | 4 | 532 | 50 | 593 | 4.52e-94 | 299 |
| Msa0749140 | MtrunA17_Chr7g0271221 | 32.364 | 550 | 338 | 10 | 3 | 543 | 34 | 558 | 2.02e-93 | 296 |
| Msa0749140 | MtrunA17_Chr4g0069581 | 34.340 | 530 | 322 | 10 | 4 | 525 | 4 | 515 | 1.36e-90 | 288 |
| Msa0749140 | MtrunA17_Chr3g0133341 | 30.939 | 543 | 348 | 8 | 2 | 533 | 30 | 556 | 3.29e-89 | 285 |
| Msa0749140 | MtrunA17_Chr8g0362711 | 32.234 | 546 | 332 | 8 | 2 | 525 | 40 | 569 | 1.71e-87 | 281 |
| Msa0749140 | MtrunA17_Chr4g0014861 | 35.581 | 430 | 255 | 7 | 100 | 524 | 13 | 425 | 1.07e-86 | 275 |
| Msa0749140 | MtrunA17_Chr4g0060001 | 31.048 | 525 | 348 | 7 | 1 | 517 | 44 | 562 | 1.63e-86 | 279 |
| Msa0749140 | MtrunA17_Chr7g0261751 | 34.943 | 435 | 247 | 7 | 7 | 406 | 52 | 485 | 8.30e-86 | 275 |
| Msa0749140 | MtrunA17_Chr3g0082631 | 34.763 | 443 | 270 | 8 | 103 | 532 | 30 | 466 | 2.90e-84 | 270 |
| Msa0749140 | MtrunA17_Chr8g0362801 | 32.974 | 464 | 299 | 9 | 69 | 525 | 1 | 459 | 3.08e-84 | 270 |
| Msa0749140 | MtrunA17_Chr8g0379971 | 31.922 | 567 | 352 | 10 | 3 | 537 | 37 | 601 | 1.21e-83 | 271 |
| Msa0749140 | MtrunA17_Chr1g0157601 | 30.654 | 535 | 349 | 10 | 1 | 524 | 30 | 553 | 1.82e-83 | 270 |
| Msa0749140 | MtrunA17_Chr7g0240271 | 29.380 | 548 | 372 | 8 | 1 | 538 | 39 | 581 | 2.06e-83 | 271 |
| Msa0749140 | MtrunA17_Chr5g0415961 | 31.009 | 545 | 341 | 10 | 2 | 525 | 40 | 570 | 1.03e-82 | 268 |
| Msa0749140 | MtrunA17_Chr8g0390331 | 29.981 | 537 | 358 | 8 | 1 | 528 | 30 | 557 | 6.50e-82 | 266 |
| Msa0749140 | MtrunA17_Chr1g0157611 | 30.601 | 549 | 359 | 9 | 1 | 538 | 31 | 568 | 7.72e-80 | 261 |
| Msa0749140 | MtrunA17_Chr5g0415841 | 30.388 | 464 | 309 | 7 | 69 | 525 | 1 | 457 | 1.20e-78 | 254 |
| Msa0749140 | MtrunA17_Chr2g0331511 | 28.780 | 549 | 372 | 10 | 1 | 537 | 36 | 577 | 1.34e-78 | 259 |
| Msa0749140 | MtrunA17_Chr1g0157621 | 29.630 | 540 | 358 | 9 | 7 | 538 | 1 | 526 | 7.96e-78 | 255 |
| Msa0749140 | MtrunA17_Chr7g0235521 | 30.258 | 466 | 315 | 7 | 81 | 541 | 13 | 473 | 3.60e-77 | 251 |
| Msa0749140 | MtrunA17_Chr1g0177591 | 30.524 | 534 | 335 | 13 | 1 | 524 | 57 | 564 | 1.66e-76 | 252 |
| Msa0749140 | MtrunA17_Chr7g0240131 | 30.043 | 466 | 316 | 7 | 81 | 541 | 13 | 473 | 9.07e-76 | 248 |
| Msa0749140 | MtrunA17_Chr4g0003761 | 29.144 | 549 | 368 | 11 | 1 | 538 | 45 | 583 | 4.48e-75 | 249 |
| Msa0749140 | MtrunA17_Chr1g0147631 | 29.084 | 557 | 366 | 13 | 1 | 540 | 40 | 584 | 4.76e-75 | 249 |
| Msa0749140 | MtrunA17_Chr7g0240181 | 29.828 | 466 | 317 | 7 | 81 | 541 | 13 | 473 | 7.20e-75 | 245 |
| Msa0749140 | MtrunA17_Chr7g0240211 | 29.828 | 466 | 317 | 7 | 81 | 541 | 13 | 473 | 7.91e-75 | 245 |
| Msa0749140 | MtrunA17_Chr8g0379991 | 31.952 | 579 | 344 | 13 | 4 | 537 | 1 | 574 | 9.88e-75 | 247 |
| Msa0749140 | MtrunA17_Chr7g0261731 | 38.235 | 306 | 173 | 3 | 7 | 305 | 52 | 348 | 2.31e-74 | 240 |
| Msa0749140 | MtrunA17_Chr2g0331481 | 27.949 | 551 | 379 | 9 | 1 | 541 | 40 | 582 | 1.87e-73 | 246 |
| Msa0749140 | MtrunA17_Chr7g0240281 | 28.495 | 558 | 379 | 10 | 1 | 543 | 39 | 591 | 4.51e-72 | 241 |
| Msa0749140 | MtrunA17_Chr6g0451841 | 29.630 | 540 | 324 | 12 | 8 | 524 | 27 | 533 | 2.65e-71 | 237 |
| Msa0749140 | MtrunA17_Chr2g0331471 | 27.768 | 551 | 380 | 9 | 1 | 541 | 103 | 645 | 3.02e-71 | 241 |
| Msa0749140 | MtrunA17_Chr1g0177611 | 31.556 | 450 | 280 | 11 | 80 | 524 | 9 | 435 | 3.54e-71 | 234 |
| Msa0749140 | MtrunA17_Chr2g0331521 | 27.322 | 549 | 379 | 10 | 1 | 538 | 37 | 576 | 8.52e-71 | 237 |
| Msa0749140 | MtrunA17_Chr2g0325951 | 31.061 | 528 | 335 | 11 | 6 | 525 | 39 | 545 | 8.53e-71 | 236 |
| Msa0749140 | MtrunA17_Chr2g0325961 | 31.002 | 529 | 335 | 10 | 6 | 525 | 39 | 546 | 1.29e-68 | 231 |
| Msa0749140 | MtrunA17_Chr7g0240151 | 28.788 | 462 | 301 | 7 | 81 | 537 | 13 | 451 | 3.25e-68 | 227 |
| Msa0749140 | MtrunA17_Chr2g0326211 | 29.907 | 535 | 332 | 11 | 6 | 525 | 39 | 545 | 4.55e-68 | 229 |
| Msa0749140 | MtrunA17_Chr1g0177631 | 30.512 | 449 | 286 | 11 | 80 | 524 | 9 | 435 | 1.39e-65 | 219 |
| Msa0749140 | MtrunA17_Chr2g0331461 | 29.061 | 554 | 370 | 9 | 1 | 541 | 40 | 583 | 2.35e-63 | 218 |
| Msa0749140 | MtrunA17_Chr3g0112631 | 36.201 | 279 | 167 | 6 | 255 | 528 | 3 | 275 | 6.12e-60 | 200 |
| Msa0749140 | MtrunA17_Chr3g0142121 | 36.972 | 284 | 159 | 6 | 256 | 538 | 11 | 275 | 1.12e-57 | 194 |
| Msa0749140 | MtrunA17_Chr3g0142111 | 36.531 | 271 | 158 | 4 | 1 | 262 | 61 | 326 | 3.18e-52 | 181 |
| Msa0749140 | MtrunA17_Chr7g0234151 | 31.555 | 431 | 260 | 9 | 95 | 524 | 22 | 418 | 5.43e-51 | 180 |
| Msa0749140 | MtrunA17_Chr7g0234381 | 31.787 | 431 | 259 | 9 | 95 | 524 | 22 | 418 | 6.95e-51 | 180 |
| Msa0749140 | MtrunA17_Chr4g0060071 | 31.769 | 277 | 175 | 5 | 251 | 525 | 32 | 296 | 4.84e-45 | 160 |
| Msa0749140 | MtrunA17_Chr7g0234181 | 29.698 | 431 | 268 | 10 | 95 | 524 | 17 | 413 | 1.06e-44 | 163 |
| Msa0749140 | MtrunA17_Chr7g0261721 | 35.354 | 198 | 122 | 3 | 330 | 524 | 4 | 198 | 8.72e-35 | 130 |
| Msa0749140 | MtrunA17_Chr3g0112651 | 35.263 | 190 | 117 | 3 | 67 | 256 | 20 | 203 | 1.77e-32 | 124 |
| Msa0749140 | MtrunA17_Chr1g0147591 | 28.351 | 194 | 130 | 3 | 110 | 300 | 9 | 196 | 7.71e-30 | 116 |
| Msa0749140 | MtrunA17_Chr7g0261831 | 33.544 | 158 | 94 | 4 | 212 | 367 | 3 | 151 | 1.69e-21 | 93.2 |
| Msa0749140 | MtrunA17_Chr2g0326221 | 29.515 | 227 | 130 | 6 | 300 | 525 | 24 | 221 | 6.94e-20 | 88.6 |
| Msa0749140 | MtrunA17_Chr4g0060061 | 33.600 | 125 | 78 | 1 | 89 | 213 | 9 | 128 | 2.17e-18 | 81.6 |
| Msa0749140 | MtrunA17_Chr8g0382591 | 32.710 | 107 | 70 | 2 | 255 | 359 | 3 | 109 | 1.16e-11 | 62.8 |
| Msa0749140 | MtrunA17_Chr3g0082621 | 44.828 | 58 | 32 | 0 | 8 | 65 | 8 | 65 | 1.44e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0749140 | AT1G32450.1 | 75.413 | 545 | 126 | 3 | 1 | 537 | 50 | 594 | 0.0 | 855 |
| Msa0749140 | AT4G21680.1 | 68.901 | 537 | 155 | 5 | 1 | 528 | 41 | 574 | 0.0 | 749 |
| Msa0749140 | AT5G19640.1 | 58.470 | 549 | 202 | 6 | 1 | 543 | 72 | 600 | 0.0 | 645 |
| Msa0749140 | AT3G54140.1 | 43.503 | 531 | 288 | 6 | 1 | 525 | 37 | 561 | 7.39e-160 | 468 |
| Msa0749140 | AT3G54140.2 | 43.503 | 531 | 288 | 6 | 1 | 525 | 37 | 561 | 7.39e-160 | 468 |
| Msa0749140 | AT2G02040.1 | 42.561 | 531 | 294 | 5 | 1 | 525 | 54 | 579 | 8.46e-154 | 452 |
| Msa0749140 | AT1G62200.1 | 42.669 | 532 | 288 | 7 | 1 | 525 | 65 | 586 | 9.92e-152 | 447 |
| Msa0749140 | AT1G62200.2 | 40.463 | 561 | 288 | 8 | 1 | 525 | 65 | 615 | 3.59e-145 | 432 |
| Msa0749140 | AT1G62200.3 | 40.463 | 561 | 288 | 8 | 1 | 525 | 79 | 629 | 5.04e-145 | 432 |
| Msa0749140 | AT5G01180.2 | 39.811 | 530 | 306 | 6 | 1 | 524 | 38 | 560 | 4.40e-144 | 427 |
| Msa0749140 | AT5G01180.3 | 39.811 | 530 | 306 | 6 | 1 | 524 | 38 | 560 | 4.40e-144 | 427 |
| Msa0749140 | AT5G01180.1 | 39.811 | 530 | 306 | 6 | 1 | 524 | 38 | 560 | 4.40e-144 | 427 |
| Msa0749140 | AT2G02020.1 | 39.238 | 525 | 267 | 8 | 1 | 518 | 55 | 534 | 1.09e-126 | 382 |
| Msa0749140 | AT3G54450.1 | 36.229 | 541 | 318 | 10 | 8 | 538 | 32 | 555 | 5.02e-116 | 355 |
| Msa0749140 | AT2G26690.2 | 36.545 | 550 | 329 | 8 | 2 | 544 | 5 | 541 | 1.04e-114 | 351 |
| Msa0749140 | AT5G46050.1 | 35.902 | 532 | 321 | 9 | 2 | 524 | 41 | 561 | 1.63e-114 | 352 |
| Msa0749140 | AT2G26690.3 | 36.969 | 541 | 321 | 8 | 11 | 544 | 2 | 529 | 3.19e-114 | 349 |
| Msa0749140 | AT2G26690.1 | 36.545 | 550 | 329 | 8 | 2 | 544 | 38 | 574 | 5.01e-114 | 350 |
| Msa0749140 | AT5G46040.1 | 35.019 | 534 | 325 | 10 | 2 | 525 | 41 | 562 | 1.48e-109 | 339 |
| Msa0749140 | AT1G69870.1 | 33.031 | 551 | 352 | 9 | 1 | 538 | 64 | 610 | 1.00e-107 | 335 |
| Msa0749140 | AT1G12110.1 | 36.347 | 553 | 328 | 10 | 2 | 539 | 41 | 584 | 3.12e-106 | 330 |
| Msa0749140 | AT3G53960.1 | 34.463 | 531 | 329 | 10 | 7 | 528 | 56 | 576 | 3.85e-106 | 330 |
| Msa0749140 | AT2G37900.1 | 33.459 | 529 | 329 | 8 | 7 | 528 | 57 | 569 | 5.45e-105 | 327 |
| Msa0749140 | AT2G02020.2 | 36.000 | 525 | 263 | 10 | 1 | 518 | 55 | 513 | 1.38e-104 | 324 |
| Msa0749140 | AT1G68570.2 | 35.262 | 553 | 337 | 12 | 1 | 539 | 6 | 551 | 9.84e-103 | 321 |
| Msa0749140 | AT1G68570.1 | 35.262 | 553 | 337 | 12 | 1 | 539 | 36 | 581 | 2.70e-102 | 320 |
| Msa0749140 | AT5G13400.1 | 33.952 | 539 | 336 | 7 | 1 | 525 | 77 | 609 | 3.99e-101 | 318 |
| Msa0749140 | AT1G18880.1 | 32.790 | 552 | 351 | 10 | 1 | 538 | 32 | 577 | 1.41e-99 | 313 |
| Msa0749140 | AT1G59740.1 | 34.791 | 549 | 323 | 12 | 2 | 536 | 55 | 582 | 2.71e-98 | 310 |
| Msa0749140 | AT2G37900.2 | 33.069 | 505 | 315 | 8 | 31 | 528 | 2 | 490 | 7.53e-98 | 306 |
| Msa0749140 | AT5G46050.2 | 36.304 | 460 | 278 | 7 | 69 | 524 | 1 | 449 | 1.10e-97 | 305 |
| Msa0749140 | AT2G40460.1 | 34.451 | 537 | 322 | 11 | 2 | 526 | 38 | 556 | 1.95e-97 | 307 |
| Msa0749140 | AT1G27080.1 | 33.029 | 548 | 342 | 11 | 1 | 538 | 27 | 559 | 5.55e-95 | 301 |
| Msa0749140 | AT5G62680.1 | 32.532 | 541 | 343 | 10 | 1 | 525 | 56 | 590 | 2.51e-94 | 300 |
| Msa0749140 | AT3G47960.1 | 32.407 | 540 | 343 | 10 | 1 | 525 | 74 | 606 | 6.33e-94 | 300 |
| Msa0749140 | AT1G72140.1 | 34.275 | 531 | 302 | 9 | 7 | 524 | 53 | 549 | 1.09e-92 | 294 |
| Msa0749140 | AT1G33440.1 | 35.382 | 537 | 312 | 11 | 2 | 524 | 52 | 567 | 3.30e-92 | 294 |
| Msa0749140 | AT3G21670.1 | 34.808 | 520 | 311 | 7 | 11 | 521 | 52 | 552 | 7.85e-92 | 293 |
| Msa0749140 | AT1G27080.2 | 33.083 | 532 | 331 | 11 | 17 | 538 | 1 | 517 | 8.53e-92 | 291 |
| Msa0749140 | AT1G72130.1 | 35.019 | 534 | 294 | 9 | 2 | 524 | 39 | 530 | 3.52e-91 | 290 |
| Msa0749140 | AT1G72125.1 | 33.837 | 529 | 314 | 10 | 8 | 524 | 49 | 553 | 8.39e-90 | 287 |
| Msa0749140 | AT1G22540.1 | 33.459 | 532 | 317 | 9 | 8 | 529 | 50 | 554 | 2.68e-87 | 280 |
| Msa0749140 | AT1G22550.1 | 32.519 | 532 | 319 | 10 | 8 | 524 | 50 | 556 | 5.51e-87 | 280 |
| Msa0749140 | AT1G72120.1 | 32.892 | 529 | 315 | 10 | 8 | 524 | 49 | 549 | 3.33e-84 | 272 |
| Msa0749140 | AT1G22570.2 | 33.789 | 512 | 302 | 11 | 8 | 505 | 13 | 501 | 1.23e-83 | 270 |
| Msa0749140 | AT1G22570.1 | 33.789 | 512 | 302 | 11 | 8 | 505 | 50 | 538 | 3.59e-83 | 270 |
| Msa0749140 | AT1G69850.1 | 30.545 | 550 | 359 | 9 | 2 | 532 | 39 | 584 | 5.79e-80 | 262 |
| Msa0749140 | AT1G52190.1 | 28.757 | 539 | 357 | 10 | 1 | 521 | 34 | 563 | 1.01e-79 | 262 |
| Msa0749140 | AT5G62730.2 | 30.826 | 545 | 323 | 12 | 2 | 524 | 11 | 523 | 5.84e-79 | 258 |
| Msa0749140 | AT3G45720.1 | 28.545 | 536 | 351 | 8 | 10 | 537 | 41 | 552 | 7.41e-79 | 258 |
| Msa0749140 | AT5G62730.1 | 30.826 | 545 | 323 | 12 | 2 | 524 | 70 | 582 | 2.05e-78 | 258 |
| Msa0749140 | AT1G27040.3 | 29.609 | 537 | 357 | 7 | 2 | 530 | 9 | 532 | 7.19e-78 | 255 |
| Msa0749140 | AT1G27040.2 | 29.609 | 537 | 357 | 7 | 2 | 530 | 37 | 560 | 1.14e-77 | 255 |
| Msa0749140 | AT1G27040.1 | 29.609 | 537 | 357 | 7 | 2 | 530 | 41 | 564 | 1.35e-77 | 255 |
| Msa0749140 | AT3G16180.1 | 29.696 | 559 | 364 | 12 | 1 | 538 | 36 | 586 | 2.56e-77 | 255 |
| Msa0749140 | AT3G45650.1 | 30.258 | 542 | 338 | 12 | 6 | 538 | 40 | 550 | 5.16e-77 | 253 |
| Msa0749140 | AT3G45710.1 | 29.533 | 535 | 347 | 8 | 10 | 537 | 43 | 554 | 1.52e-76 | 252 |
| Msa0749140 | AT1G72130.2 | 34.234 | 444 | 248 | 7 | 90 | 524 | 4 | 412 | 8.05e-76 | 246 |
| Msa0749140 | AT1G72130.3 | 34.234 | 444 | 248 | 7 | 90 | 524 | 4 | 412 | 8.05e-76 | 246 |
| Msa0749140 | AT3G45680.1 | 29.346 | 535 | 347 | 9 | 10 | 537 | 42 | 552 | 1.32e-75 | 249 |
| Msa0749140 | AT5G14940.1 | 29.537 | 562 | 323 | 16 | 8 | 538 | 27 | 546 | 2.36e-75 | 249 |
| Msa0749140 | AT3G45660.1 | 28.466 | 541 | 351 | 10 | 6 | 537 | 39 | 552 | 1.02e-72 | 242 |
| Msa0749140 | AT3G45660.3 | 28.466 | 541 | 351 | 10 | 6 | 537 | 39 | 552 | 1.02e-72 | 242 |
| Msa0749140 | AT3G45660.2 | 28.835 | 541 | 349 | 11 | 6 | 537 | 60 | 573 | 1.16e-72 | 242 |
| Msa0749140 | AT3G45650.2 | 29.049 | 568 | 337 | 13 | 6 | 538 | 40 | 576 | 4.32e-72 | 241 |
| Msa0749140 | AT1G69860.1 | 30.597 | 536 | 342 | 12 | 1 | 525 | 31 | 547 | 9.65e-72 | 239 |
| Msa0749140 | AT5G28470.2 | 27.767 | 533 | 371 | 6 | 1 | 526 | 30 | 555 | 6.15e-71 | 237 |
| Msa0749140 | AT3G45700.1 | 27.644 | 539 | 353 | 9 | 6 | 537 | 34 | 542 | 1.39e-69 | 233 |
| Msa0749140 | AT5G28470.1 | 27.580 | 533 | 370 | 7 | 1 | 526 | 30 | 553 | 4.74e-68 | 229 |
| Msa0749140 | AT3G01350.1 | 27.957 | 558 | 348 | 13 | 8 | 535 | 27 | 560 | 4.55e-64 | 219 |
| Msa0749140 | AT3G25260.1 | 27.392 | 533 | 325 | 12 | 2 | 524 | 35 | 515 | 4.34e-61 | 210 |
| Msa0749140 | AT3G45690.1 | 26.481 | 540 | 327 | 11 | 6 | 539 | 36 | 511 | 7.84e-61 | 209 |
| Msa0749140 | AT3G25280.1 | 26.365 | 531 | 335 | 14 | 4 | 524 | 37 | 521 | 5.04e-51 | 183 |
| Msa0749140 | AT2G38100.1 | 24.176 | 546 | 362 | 17 | 6 | 538 | 9 | 515 | 1.50e-32 | 131 |
| Msa0749140 | AT2G38100.2 | 24.067 | 536 | 356 | 16 | 16 | 538 | 2 | 499 | 1.75e-32 | 130 |
| Msa0749140 | AT2G38100.3 | 24.176 | 546 | 362 | 17 | 6 | 538 | 15 | 521 | 2.20e-32 | 130 |
| Msa0749140 | AT5G11570.1 | 30.000 | 250 | 163 | 5 | 277 | 524 | 237 | 476 | 7.86e-30 | 122 |
| Msa0749140 | AT5G11570.1 | 30.332 | 211 | 139 | 5 | 1 | 205 | 26 | 234 | 2.27e-20 | 94.7 |
Find 152 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGAACAGGCGCCTTTC+TGG | 0.168501 | 5_2:-2538037 | None:intergenic |
| TAAAACATGTGCTGTCTTTC+AGG | 0.175129 | 5_2:+2537077 | Msa0749140:CDS |
| CTTTCCTAAGTGACTCTTAT+TGG | 0.215786 | 5_2:+2537046 | Msa0749140:CDS |
| ACTTCTTCAACTTGACTTAC+AGG | 0.233280 | 5_2:-2538074 | None:intergenic |
| TACTGAGACTCCTTCCAATT+TGG | 0.238205 | 5_2:+2538105 | Msa0749140:CDS |
| CTGGACTAGTTGAATGTTAT+AGG | 0.257127 | 5_2:+2538402 | Msa0749140:CDS |
| GAATGTGGGCTCTTGGCTTC+TGG | 0.265662 | 5_2:+2537527 | Msa0749140:CDS |
| TTTCCTAAGTGACTCTTATT+GGG | 0.274400 | 5_2:+2537047 | Msa0749140:CDS |
| TGACCTTTATTGAGGTTTAC+TGG | 0.278086 | 5_2:-2538698 | None:intergenic |
| ATCCCTCAGTATGCACTTAT+AGG | 0.280570 | 5_2:+2538491 | Msa0749140:CDS |
| CTTTGCAGTGGCGGCAGTCT+TGG | 0.311213 | 5_2:-2538439 | None:intergenic |
| GATTCATTCCCACAACCTTT+AGG | 0.315220 | 5_2:-2537265 | None:intergenic |
| TCTACCTAGCTTTGAACTTT+GGG | 0.317823 | 5_2:+2537461 | Msa0749140:CDS |
| CGAGTACTTTGAGCATCTTC+TGG | 0.327628 | 5_2:+2538465 | Msa0749140:CDS |
| CCACTTTGCACATGCAATAT+AGG | 0.335349 | 5_2:-2538774 | None:intergenic |
| TTCTACCTAGCTTTGAACTT+TGG | 0.355047 | 5_2:+2537460 | Msa0749140:CDS |
| GAAAACCACCGAGTATATTA+TGG | 0.363778 | 5_2:-2538135 | None:intergenic |
| CTTGGCTTCTGGCTGTCTGC+AGG | 0.364129 | 5_2:+2537538 | Msa0749140:CDS |
| CAACCGAATATTGCCACATT+CGG | 0.367343 | 5_2:+2537373 | Msa0749140:CDS |
| CAACTATGTAAGTAGCTTAC+TGG | 0.367530 | 5_2:+2538625 | Msa0749140:CDS |
| TCAATAAAGGTCACCTAGAT+AGG | 0.368292 | 5_2:+2538708 | Msa0749140:CDS |
| AAACAATATCAGTGCGATAA+AGG | 0.368557 | 5_2:-2537566 | None:intergenic |
| TCGATCTATCTCATTGCCTT+GGG | 0.371691 | 5_2:+2537337 | Msa0749140:CDS |
| GCACTGATATTGTTTCTTGT+TGG | 0.378724 | 5_2:+2537574 | Msa0749140:CDS |
| ATTATGGTGCAGAGCCAAAT+TGG | 0.381296 | 5_2:-2538119 | None:intergenic |
| TTTGTTGTGATGAAGGTTCT+TGG | 0.383790 | 5_2:+2537977 | Msa0749140:intron |
| AACCGAATATTGCCACATTC+GGG | 0.389216 | 5_2:+2537374 | Msa0749140:CDS |
| TTGATTAAACCTAAAGGTTG+TGG | 0.389825 | 5_2:+2537256 | Msa0749140:CDS |
| TACATAGTTGCCGAGGGAAA+TGG | 0.392484 | 5_2:-2538612 | None:intergenic |
| GCCCCGAATGTGGCAATATT+CGG | 0.395016 | 5_2:-2537376 | None:intergenic |
| TACAAGTCATCTCCATTTGA+TGG | 0.396660 | 5_2:-2537694 | None:intergenic |
| CCAGATGGCTTAAAGAGTTT+CGG | 0.398986 | 5_2:+2538569 | Msa0749140:CDS |
| CCGAAACTCTTTAAGCCATC+TGG | 0.412448 | 5_2:-2538569 | None:intergenic |
| CTCGATCTATCTCATTGCCT+TGG | 0.417455 | 5_2:+2537336 | Msa0749140:CDS |
| TGATTAAACCTAAAGGTTGT+GGG | 0.432667 | 5_2:+2537257 | Msa0749140:CDS |
| CCATTTGCTCACATTGTTAG+CGG | 0.435931 | 5_2:-2536989 | None:intergenic |
| TTTGTCCTACCACCCTTGTC+AGG | 0.440304 | 5_2:-2536954 | None:intergenic |
| AAAGTTGAAATGCCATCAAA+TGG | 0.443101 | 5_2:+2537682 | Msa0749140:CDS |
| GAGACGCCATGGGTTGGAAC+AGG | 0.445766 | 5_2:-2538048 | None:intergenic |
| CACCATTCTCGTCTATTTCG+AGG | 0.447297 | 5_2:+2537498 | Msa0749140:CDS |
| AGAGGAAGTAAAACCTATCT+AGG | 0.447626 | 5_2:-2538721 | None:intergenic |
| CTCTTCTTGATTAAACCTAA+AGG | 0.452670 | 5_2:+2537250 | Msa0749140:CDS |
| TTGATGCAGCAACAAGGACT+TGG | 0.457746 | 5_2:-2537651 | None:intergenic |
| CTCGTCTATTTCGAGGATGA+AGG | 0.458526 | 5_2:+2537505 | Msa0749140:CDS |
| TATCTCATTGCCTTGGGGAA+TGG | 0.461561 | 5_2:+2537343 | Msa0749140:CDS |
| ATGTGGAAAACATTCAAGTT+GGG | 0.461991 | 5_2:+2537294 | Msa0749140:CDS |
| CTGAGGTGTTTATGTATGTA+GGG | 0.463211 | 5_2:+2538519 | Msa0749140:CDS |
| GATGAAGGAATGTGGGCTCT+TGG | 0.464285 | 5_2:+2537520 | Msa0749140:CDS |
| GAACCAATGTCTGGCAACTC+TGG | 0.466451 | 5_2:+2536897 | None:intergenic |
| TCTACGGAGGATCACATGCC+GGG | 0.468350 | 5_2:+2538668 | Msa0749140:CDS |
| CCGCTAACAATGTGAGCAAA+TGG | 0.471071 | 5_2:+2536989 | Msa0749140:CDS |
| TCTGAGGTGTTTATGTATGT+AGG | 0.471453 | 5_2:+2538518 | Msa0749140:CDS |
| GTCCGACTCTAAGGGACTTA+CGG | 0.471843 | 5_2:+2538325 | Msa0749140:CDS |
| TCGAATTCTCGATCCATTTG+TGG | 0.474043 | 5_2:+2538289 | Msa0749140:CDS |
| CCTGGCAAGAGGGTTGCCAC+TGG | 0.476047 | 5_2:-2537623 | None:intergenic |
| AATGTGGAAAACATTCAAGT+TGG | 0.478518 | 5_2:+2537293 | Msa0749140:CDS |
| ACTTACGGAGCTTCAGAGAA+TGG | 0.483312 | 5_2:+2538340 | Msa0749140:CDS |
| TATCTAGGTGACCTTTATTG+AGG | 0.485934 | 5_2:-2538706 | None:intergenic |
| AAACATTCAAGTTGGGAGAT+GGG | 0.491686 | 5_2:+2537301 | Msa0749140:CDS |
| CGAATTCTCGATCCATTTGT+GGG | 0.495488 | 5_2:+2538290 | Msa0749140:CDS |
| CCAGTGGCAACCCTCTTGCC+AGG | 0.497542 | 5_2:+2537623 | Msa0749140:CDS |
| AACAAGGACTTGGCAGAACC+TGG | 0.499858 | 5_2:-2537641 | None:intergenic |
| GTGGTACAAGAGTATACAGC+TGG | 0.502476 | 5_2:+2538793 | Msa0749140:CDS |
| AAAACATTCAAGTTGGGAGA+TGG | 0.502988 | 5_2:+2537300 | Msa0749140:CDS |
| GACCTTTATTGAGGTTTACT+GGG | 0.503932 | 5_2:-2538697 | None:intergenic |
| TGTTTACATCTTCTCTCTAG+TGG | 0.504895 | 5_2:+2537020 | Msa0749140:CDS |
| ATCCCAGTAAACCTCAATAA+AGG | 0.507470 | 5_2:+2538695 | Msa0749140:CDS |
| GTAATAGCAATGGTTTCAGC+TGG | 0.515102 | 5_2:+2538383 | Msa0749140:CDS |
| CAAGACTGCCGCCACTGCAA+AGG | 0.518476 | 5_2:+2538440 | Msa0749140:CDS |
| CTCATTGCCTTGGGGAATGG+AGG | 0.519787 | 5_2:+2537346 | Msa0749140:CDS |
| TGCATGACATCCATTTCCCT+CGG | 0.522165 | 5_2:+2538602 | Msa0749140:CDS |
| GAGGTACGATGACAAGGATA+AGG | 0.524291 | 5_2:-2537230 | None:intergenic |
| TCGATGTCAAGGCGGCTAAG+AGG | 0.525443 | 5_2:-2538739 | None:intergenic |
| CTGGCAAGAGGGTTGCCACT+GGG | 0.527982 | 5_2:-2537622 | None:intergenic |
| CTCTACGGAGGATCACATGC+CGG | 0.528318 | 5_2:+2538667 | Msa0749140:CDS |
| ATGCCAGAGTTGCCAGACAT+TGG | 0.529945 | 5_2:-2536900 | None:intergenic |
| GGCTTGAAATGTCGGTACTT+TGG | 0.530731 | 5_2:-2537601 | None:intergenic |
| TACTCGAGCCTTTGCAGTGG+CGG | 0.530816 | 5_2:-2538448 | None:intergenic |
| GTTGCCCAAAGTTCAAAGCT+AGG | 0.531984 | 5_2:-2537465 | None:intergenic |
| TGCCACTGGGCTTGAAATGT+CGG | 0.534487 | 5_2:-2537609 | None:intergenic |
| AACATTCAAGTTGGGAGATG+GGG | 0.535122 | 5_2:+2537302 | Msa0749140:CDS |
| CTTACGGAGCTTCAGAGAAT+GGG | 0.535433 | 5_2:+2538341 | Msa0749140:CDS |
| TTCAATGCTCAAACACCAGA+TGG | 0.538636 | 5_2:+2538554 | Msa0749140:CDS |
| AAGGCGCCTGTTCCAACCCA+TGG | 0.544927 | 5_2:+2538042 | Msa0749140:CDS |
| CTTAGCCGCCTTGACATCGA+TGG | 0.545584 | 5_2:+2538742 | Msa0749140:CDS |
| TTGATCAGTGAACCAATGTC+TGG | 0.547412 | 5_2:+2536888 | None:intergenic |
| GTTTACATCTTCTCTCTAGT+GGG | 0.548661 | 5_2:+2537021 | Msa0749140:CDS |
| TGTTATAGCTGTAATAGCAA+TGG | 0.550110 | 5_2:+2538373 | Msa0749140:CDS |
| AAGTCCTTGTTGCTGCATCA+AGG | 0.550980 | 5_2:+2537653 | Msa0749140:CDS |
| CAAGAAGAGGTACGATGACA+AGG | 0.553042 | 5_2:-2537236 | None:intergenic |
| TCAAAGCAAGACATGCTAGC+TGG | 0.554527 | 5_2:-2538230 | None:intergenic |
| AATTAGACTTTGAAGCTACC+TGG | 0.558655 | 5_2:-2538842 | None:intergenic |
| CGCAAAGAGAATGATGAGCC+AGG | 0.562335 | 5_2:+2538824 | Msa0749140:CDS |
| TAGGTAGAAGTAGCTAAAGA+AGG | 0.563359 | 5_2:-2537446 | None:intergenic |
| TTCCCCAATAAGAGTCACTT+AGG | 0.572082 | 5_2:-2537050 | None:intergenic |
| AGGACAGAGACGCCATGGGT+TGG | 0.573128 | 5_2:-2538054 | None:intergenic |
| ATCCTCGAAATAGACGAGAA+TGG | 0.573136 | 5_2:-2537500 | None:intergenic |
| CTTTCCTTGATGCAGCAACA+AGG | 0.573520 | 5_2:-2537657 | None:intergenic |
| CTTTAGGTTTAATCAAGAAG+AGG | 0.576154 | 5_2:-2537249 | None:intergenic |
| AACAATGTGAGCAAATGGAC+TGG | 0.581553 | 5_2:+2536994 | Msa0749140:CDS |
| GAGCTTCAGAGAATGGGAGT+TGG | 0.583029 | 5_2:+2538347 | Msa0749140:CDS |
| TTCCTAAGTGACTCTTATTG+GGG | 0.583654 | 5_2:+2537048 | Msa0749140:CDS |
| AATTAAGTCCATCGATGTCA+AGG | 0.584514 | 5_2:-2538750 | None:intergenic |
| CGAATGTGGCAATATTCGGT+TGG | 0.585478 | 5_2:-2537372 | None:intergenic |
| CGATCTATCTCATTGCCTTG+GGG | 0.585703 | 5_2:+2537338 | Msa0749140:CDS |
| AGCTACTTACATAGTTGCCG+AGG | 0.588531 | 5_2:-2538619 | None:intergenic |
| CTCCGTAAGTCCCTTAGAGT+CGG | 0.591568 | 5_2:-2538327 | None:intergenic |
| CTTGTATAACATGGATACAA+AGG | 0.592055 | 5_2:+2537711 | Msa0749140:CDS |
| GACGAGGAGCACTCGAAGGA+GGG | 0.592862 | 5_2:+2537409 | Msa0749140:CDS |
| ATTTCGAGGATGAAGGAATG+TGG | 0.593541 | 5_2:+2537512 | Msa0749140:CDS |
| AGAGATCAAGATAACCAGAA+AGG | 0.593846 | 5_2:+2538023 | Msa0749140:CDS |
| CTCCTATAAGTGCATACTGA+GGG | 0.598714 | 5_2:-2538493 | None:intergenic |
| AGGTTTACTGGGATCCACCC+CGG | 0.598989 | 5_2:-2538686 | None:intergenic |
| TGACGAGGAGCACTCGAAGG+AGG | 0.599052 | 5_2:+2537408 | Msa0749140:CDS |
| CTTACAGGACAGAGACGCCA+TGG | 0.599282 | 5_2:-2538059 | None:intergenic |
| CTTGGCAGAACCTGGCAAGA+GGG | 0.603089 | 5_2:-2537633 | None:intergenic |
| ACCTAGTGGTATTCCTGACA+AGG | 0.604915 | 5_2:+2536941 | Msa0749140:CDS |
| TGGAGATGACTTGTATAACA+TGG | 0.607014 | 5_2:+2537702 | Msa0749140:CDS |
| ACTTGGCAGAACCTGGCAAG+AGG | 0.608237 | 5_2:-2537634 | None:intergenic |
| TGGTGCAGAGCCAAATTGGA+AGG | 0.610894 | 5_2:-2538115 | None:intergenic |
| AAACTGATCAGCCCCGAATG+TGG | 0.611538 | 5_2:-2537386 | None:intergenic |
| TGTAGTTATGAAGATCTCTA+CGG | 0.612602 | 5_2:+2538652 | Msa0749140:CDS |
| TACTCTGAAATTGTAAACAG+TGG | 0.613535 | 5_2:-2538204 | None:intergenic |
| CGGGGCTGATCAGTTTGACG+AGG | 0.615131 | 5_2:+2537393 | Msa0749140:CDS |
| GTATTCCTGACAAGGGTGGT+AGG | 0.618180 | 5_2:+2536949 | Msa0749140:CDS |
| TTTCGAGGATGAAGGAATGT+GGG | 0.619267 | 5_2:+2537513 | Msa0749140:CDS |
| CGGAGGATCACATGCCGGGG+TGG | 0.619996 | 5_2:+2538672 | Msa0749140:CDS |
| GAAGGAGGGTCACAATAAAG+TGG | 0.621467 | 5_2:+2537423 | Msa0749140:CDS |
| ACTTGAACCCGTCTGTGTGG+AGG | 0.629185 | 5_2:-2537762 | None:intergenic |
| TGCACTTATAGGAGCTTCTG+AGG | 0.629617 | 5_2:+2538502 | Msa0749140:CDS |
| GCTCTGCACCATAATATACT+CGG | 0.638311 | 5_2:+2538127 | Msa0749140:CDS |
| CCCTTGTCAGGAATACCACT+AGG | 0.642342 | 5_2:-2536942 | None:intergenic |
| CCTATATTGCATGTGCAAAG+TGG | 0.646472 | 5_2:+2538774 | Msa0749140:CDS |
| GTTTGACGAGGAGCACTCGA+AGG | 0.649207 | 5_2:+2537405 | Msa0749140:CDS |
| GCTCCTATAAGTGCATACTG+AGG | 0.657896 | 5_2:-2538494 | None:intergenic |
| TTGGTAACCTCCATTCCCCA+AGG | 0.658810 | 5_2:-2537353 | None:intergenic |
| ACCGAATATTGCCACATTCG+GGG | 0.660107 | 5_2:+2537375 | Msa0749140:CDS |
| CTTACTTGAACCCGTCTGTG+TGG | 0.660599 | 5_2:-2537765 | None:intergenic |
| CGGGATTGGAGTGAACCTAG+TGG | 0.661833 | 5_2:+2536927 | Msa0749140:CDS |
| TTACAGGACAGAGACGCCAT+GGG | 0.668038 | 5_2:-2538058 | None:intergenic |
| AAGCAAGACATGCTAGCTGG+TGG | 0.671852 | 5_2:-2538227 | None:intergenic |
| AAGTACTCGAGCCTTTGCAG+TGG | 0.678677 | 5_2:-2538451 | None:intergenic |
| GCTACTTACATAGTTGCCGA+GGG | 0.679598 | 5_2:-2538618 | None:intergenic |
| CTACGGAGGATCACATGCCG+GGG | 0.680505 | 5_2:+2538669 | Msa0749140:CDS |
| CCTAGTGGTATTCCTGACAA+GGG | 0.693962 | 5_2:+2536942 | Msa0749140:CDS |
| AGTGGTATTCCTGACAAGGG+TGG | 0.695849 | 5_2:+2536945 | Msa0749140:CDS |
| TGGTACAAGAGTATACAGCT+GGG | 0.699684 | 5_2:+2538794 | Msa0749140:CDS |
| GGGAATGAATCAATTCAATG+TGG | 0.710897 | 5_2:+2537277 | Msa0749140:CDS |
| AGTTATGAAGATCTCTACGG+AGG | 0.723212 | 5_2:+2538655 | Msa0749140:CDS |
| TACCGACATTTCAAGCCCAG+TGG | 0.725447 | 5_2:+2537607 | Msa0749140:CDS |
| TAAGTCCATCGATGTCAAGG+CGG | 0.726934 | 5_2:-2538747 | None:intergenic |
| CTGCACCATAATATACTCGG+TGG | 0.739304 | 5_2:+2538130 | Msa0749140:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTAGCTAAATAATAT+TGG | - | chr5_2:2537870-2537889 | None:intergenic | 15.0% |
| !!! | CAATATTATTTAGCTAATTT+TGG | + | chr5_2:2537868-2537887 | Msa0749140:intron | 15.0% |
| !! | CAAAATTAGCTAAATAATAT+TGG | - | chr5_2:2537870-2537889 | None:intergenic | 15.0% |
| !!! | CAATATTATTTAGCTAATTT+TGG | + | chr5_2:2537868-2537887 | Msa0749140:intron | 15.0% |
| !!! | GCTAAAAATAAAAGAGTGTT+TGG | - | chr5_2:2537143-2537162 | None:intergenic | 25.0% |
| ! | TGACTAATCAATAAATCTTC+TGG | + | chr5_2:2537179-2537198 | Msa0749140:intron | 25.0% |
| !!! | ACACACATAAGAAAGTATTA+TGG | - | chr5_2:2537816-2537835 | None:intergenic | 25.0% |
| !!! | TCAAATCATTTTAGTTCAGT+AGG | - | chr5_2:2537943-2537962 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTTTTCCCACAAA+TGG | - | chr5_2:2538305-2538324 | None:intergenic | 25.0% |
| !!! | GCTAAAAATAAAAGAGTGTT+TGG | - | chr5_2:2537143-2537162 | None:intergenic | 25.0% |
| ! | TGACTAATCAATAAATCTTC+TGG | + | chr5_2:2537179-2537198 | Msa0749140:intron | 25.0% |
| !!! | ACACACATAAGAAAGTATTA+TGG | - | chr5_2:2537816-2537835 | None:intergenic | 25.0% |
| !!! | TCAAATCATTTTAGTTCAGT+AGG | - | chr5_2:2537943-2537962 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTTTTCCCACAAA+TGG | - | chr5_2:2538305-2538324 | None:intergenic | 25.0% |
| TTTCCTAAGTGACTCTTATT+GGG | + | chr5_2:2537047-2537066 | Msa0749140:CDS | 30.0% | |
| !! | TGGCTTTGATATATATGACA+GGG | + | chr5_2:2537199-2537218 | Msa0749140:intron | 30.0% |
| ! | CTTTAGGTTTAATCAAGAAG+AGG | - | chr5_2:2537252-2537271 | None:intergenic | 30.0% |
| CTCTTCTTGATTAAACCTAA+AGG | + | chr5_2:2537250-2537269 | Msa0749140:CDS | 30.0% | |
| TTGATTAAACCTAAAGGTTG+TGG | + | chr5_2:2537256-2537275 | Msa0749140:CDS | 30.0% | |
| TGATTAAACCTAAAGGTTGT+GGG | + | chr5_2:2537257-2537276 | Msa0749140:CDS | 30.0% | |
| AATGTGGAAAACATTCAAGT+TGG | + | chr5_2:2537293-2537312 | Msa0749140:CDS | 30.0% | |
| ! | ATGTGGAAAACATTCAAGTT+GGG | + | chr5_2:2537294-2537313 | Msa0749140:CDS | 30.0% |
| AAACAATATCAGTGCGATAA+AGG | - | chr5_2:2537569-2537588 | None:intergenic | 30.0% | |
| AAAGTTGAAATGCCATCAAA+TGG | + | chr5_2:2537682-2537701 | Msa0749140:CDS | 30.0% | |
| CTTGTATAACATGGATACAA+AGG | + | chr5_2:2537711-2537730 | Msa0749140:CDS | 30.0% | |
| !!! | TCCATTTTTTGTTGTGATGA+AGG | + | chr5_2:2537970-2537989 | Msa0749140:intron | 30.0% |
| ACCTTCATCACAACAAAAAA+TGG | - | chr5_2:2537974-2537993 | None:intergenic | 30.0% | |
| ! | ATTGTAAACAGTGGTTTTCA+TGG | - | chr5_2:2538198-2538217 | None:intergenic | 30.0% |
| !! | TACTCTGAAATTGTAAACAG+TGG | - | chr5_2:2538207-2538226 | None:intergenic | 30.0% |
| TGTTATAGCTGTAATAGCAA+TGG | + | chr5_2:2538373-2538392 | Msa0749140:CDS | 30.0% | |
| TGTAGTTATGAAGATCTCTA+CGG | + | chr5_2:2538652-2538671 | Msa0749140:CDS | 30.0% | |
| TTTCCTAAGTGACTCTTATT+GGG | + | chr5_2:2537047-2537066 | Msa0749140:CDS | 30.0% | |
| !! | TGGCTTTGATATATATGACA+GGG | + | chr5_2:2537199-2537218 | Msa0749140:intron | 30.0% |
| ! | CTTTAGGTTTAATCAAGAAG+AGG | - | chr5_2:2537252-2537271 | None:intergenic | 30.0% |
| CTCTTCTTGATTAAACCTAA+AGG | + | chr5_2:2537250-2537269 | Msa0749140:CDS | 30.0% | |
| TTGATTAAACCTAAAGGTTG+TGG | + | chr5_2:2537256-2537275 | Msa0749140:CDS | 30.0% | |
| TGATTAAACCTAAAGGTTGT+GGG | + | chr5_2:2537257-2537276 | Msa0749140:CDS | 30.0% | |
| AATGTGGAAAACATTCAAGT+TGG | + | chr5_2:2537293-2537312 | Msa0749140:CDS | 30.0% | |
| ! | ATGTGGAAAACATTCAAGTT+GGG | + | chr5_2:2537294-2537313 | Msa0749140:CDS | 30.0% |
| AAACAATATCAGTGCGATAA+AGG | - | chr5_2:2537569-2537588 | None:intergenic | 30.0% | |
| AAAGTTGAAATGCCATCAAA+TGG | + | chr5_2:2537682-2537701 | Msa0749140:CDS | 30.0% | |
| CTTGTATAACATGGATACAA+AGG | + | chr5_2:2537711-2537730 | Msa0749140:CDS | 30.0% | |
| !!! | TCCATTTTTTGTTGTGATGA+AGG | + | chr5_2:2537970-2537989 | Msa0749140:intron | 30.0% |
| ACCTTCATCACAACAAAAAA+TGG | - | chr5_2:2537974-2537993 | None:intergenic | 30.0% | |
| ! | ATTGTAAACAGTGGTTTTCA+TGG | - | chr5_2:2538198-2538217 | None:intergenic | 30.0% |
| !! | TACTCTGAAATTGTAAACAG+TGG | - | chr5_2:2538207-2538226 | None:intergenic | 30.0% |
| TGTTATAGCTGTAATAGCAA+TGG | + | chr5_2:2538373-2538392 | Msa0749140:CDS | 30.0% | |
| TGTAGTTATGAAGATCTCTA+CGG | + | chr5_2:2538652-2538671 | Msa0749140:CDS | 30.0% | |
| TGTTTACATCTTCTCTCTAG+TGG | + | chr5_2:2537020-2537039 | Msa0749140:CDS | 35.0% | |
| GTTTACATCTTCTCTCTAGT+GGG | + | chr5_2:2537021-2537040 | Msa0749140:CDS | 35.0% | |
| CTTTCCTAAGTGACTCTTAT+TGG | + | chr5_2:2537046-2537065 | Msa0749140:CDS | 35.0% | |
| TTCCTAAGTGACTCTTATTG+GGG | + | chr5_2:2537048-2537067 | Msa0749140:CDS | 35.0% | |
| TAAAACATGTGCTGTCTTTC+AGG | + | chr5_2:2537077-2537096 | Msa0749140:CDS | 35.0% | |
| !! | CTGGCTTTGATATATATGAC+AGG | + | chr5_2:2537198-2537217 | Msa0749140:intron | 35.0% |
| GGGAATGAATCAATTCAATG+TGG | + | chr5_2:2537277-2537296 | Msa0749140:CDS | 35.0% | |
| !! | AAAACATTCAAGTTGGGAGA+TGG | + | chr5_2:2537300-2537319 | Msa0749140:CDS | 35.0% |
| !! | AAACATTCAAGTTGGGAGAT+GGG | + | chr5_2:2537301-2537320 | Msa0749140:CDS | 35.0% |
| TAGGTAGAAGTAGCTAAAGA+AGG | - | chr5_2:2537449-2537468 | None:intergenic | 35.0% | |
| !! | TTCTACCTAGCTTTGAACTT+TGG | + | chr5_2:2537460-2537479 | Msa0749140:CDS | 35.0% |
| !! | TCTACCTAGCTTTGAACTTT+GGG | + | chr5_2:2537461-2537480 | Msa0749140:CDS | 35.0% |
| ! | GCACTGATATTGTTTCTTGT+TGG | + | chr5_2:2537574-2537593 | Msa0749140:CDS | 35.0% |
| TACAAGTCATCTCCATTTGA+TGG | - | chr5_2:2537697-2537716 | None:intergenic | 35.0% | |
| ! | TGGAGATGACTTGTATAACA+TGG | + | chr5_2:2537702-2537721 | Msa0749140:CDS | 35.0% |
| AGTATTATGGTTTCAGCTGA+AGG | - | chr5_2:2537803-2537822 | None:intergenic | 35.0% | |
| ! | AGTTCAGTAGGATCTAGAAT+GGG | - | chr5_2:2537931-2537950 | None:intergenic | 35.0% |
| TAGTTCAGTAGGATCTAGAA+TGG | - | chr5_2:2537932-2537951 | None:intergenic | 35.0% | |
| ! | TTTGTTGTGATGAAGGTTCT+TGG | + | chr5_2:2537977-2537996 | Msa0749140:intron | 35.0% |
| AGAGATCAAGATAACCAGAA+AGG | + | chr5_2:2538023-2538042 | Msa0749140:CDS | 35.0% | |
| ACTTCTTCAACTTGACTTAC+AGG | - | chr5_2:2538077-2538096 | None:intergenic | 35.0% | |
| GAAAACCACCGAGTATATTA+TGG | - | chr5_2:2538138-2538157 | None:intergenic | 35.0% | |
| ! | ACAAATGGCTTCTCTTTTTG+TGG | + | chr5_2:2538160-2538179 | Msa0749140:CDS | 35.0% |
| ACTTAAAAAGTCCGACTCTA+AGG | + | chr5_2:2538316-2538335 | Msa0749140:CDS | 35.0% | |
| CTTAAAAAGTCCGACTCTAA+GGG | + | chr5_2:2538317-2538336 | Msa0749140:CDS | 35.0% | |
| !! | CTGGACTAGTTGAATGTTAT+AGG | + | chr5_2:2538402-2538421 | Msa0749140:CDS | 35.0% |
| ! | TCTGAGGTGTTTATGTATGT+AGG | + | chr5_2:2538518-2538537 | Msa0749140:CDS | 35.0% |
| ! | CTGAGGTGTTTATGTATGTA+GGG | + | chr5_2:2538519-2538538 | Msa0749140:CDS | 35.0% |
| CAACTATGTAAGTAGCTTAC+TGG | + | chr5_2:2538625-2538644 | Msa0749140:CDS | 35.0% | |
| ATCCCAGTAAACCTCAATAA+AGG | + | chr5_2:2538695-2538714 | Msa0749140:CDS | 35.0% | |
| GACCTTTATTGAGGTTTACT+GGG | - | chr5_2:2538700-2538719 | None:intergenic | 35.0% | |
| TGACCTTTATTGAGGTTTAC+TGG | - | chr5_2:2538701-2538720 | None:intergenic | 35.0% | |
| TATCTAGGTGACCTTTATTG+AGG | - | chr5_2:2538709-2538728 | None:intergenic | 35.0% | |
| TCAATAAAGGTCACCTAGAT+AGG | + | chr5_2:2538708-2538727 | Msa0749140:CDS | 35.0% | |
| AGAGGAAGTAAAACCTATCT+AGG | - | chr5_2:2538724-2538743 | None:intergenic | 35.0% | |
| AATTAAGTCCATCGATGTCA+AGG | - | chr5_2:2538753-2538772 | None:intergenic | 35.0% | |
| TGTTTACATCTTCTCTCTAG+TGG | + | chr5_2:2537020-2537039 | Msa0749140:CDS | 35.0% | |
| GTTTACATCTTCTCTCTAGT+GGG | + | chr5_2:2537021-2537040 | Msa0749140:CDS | 35.0% | |
| CTTTCCTAAGTGACTCTTAT+TGG | + | chr5_2:2537046-2537065 | Msa0749140:CDS | 35.0% | |
| TTCCTAAGTGACTCTTATTG+GGG | + | chr5_2:2537048-2537067 | Msa0749140:CDS | 35.0% | |
| TAAAACATGTGCTGTCTTTC+AGG | + | chr5_2:2537077-2537096 | Msa0749140:CDS | 35.0% | |
| !! | CTGGCTTTGATATATATGAC+AGG | + | chr5_2:2537198-2537217 | Msa0749140:intron | 35.0% |
| GGGAATGAATCAATTCAATG+TGG | + | chr5_2:2537277-2537296 | Msa0749140:CDS | 35.0% | |
| !! | AAAACATTCAAGTTGGGAGA+TGG | + | chr5_2:2537300-2537319 | Msa0749140:CDS | 35.0% |
| !! | AAACATTCAAGTTGGGAGAT+GGG | + | chr5_2:2537301-2537320 | Msa0749140:CDS | 35.0% |
| TAGGTAGAAGTAGCTAAAGA+AGG | - | chr5_2:2537449-2537468 | None:intergenic | 35.0% | |
| !! | TTCTACCTAGCTTTGAACTT+TGG | + | chr5_2:2537460-2537479 | Msa0749140:CDS | 35.0% |
| !! | TCTACCTAGCTTTGAACTTT+GGG | + | chr5_2:2537461-2537480 | Msa0749140:CDS | 35.0% |
| ! | GCACTGATATTGTTTCTTGT+TGG | + | chr5_2:2537574-2537593 | Msa0749140:CDS | 35.0% |
| TACAAGTCATCTCCATTTGA+TGG | - | chr5_2:2537697-2537716 | None:intergenic | 35.0% | |
| ! | TGGAGATGACTTGTATAACA+TGG | + | chr5_2:2537702-2537721 | Msa0749140:CDS | 35.0% |
| AGTATTATGGTTTCAGCTGA+AGG | - | chr5_2:2537803-2537822 | None:intergenic | 35.0% | |
| ! | AGTTCAGTAGGATCTAGAAT+GGG | - | chr5_2:2537931-2537950 | None:intergenic | 35.0% |
| TAGTTCAGTAGGATCTAGAA+TGG | - | chr5_2:2537932-2537951 | None:intergenic | 35.0% | |
| ! | TTTGTTGTGATGAAGGTTCT+TGG | + | chr5_2:2537977-2537996 | Msa0749140:intron | 35.0% |
| AGAGATCAAGATAACCAGAA+AGG | + | chr5_2:2538023-2538042 | Msa0749140:CDS | 35.0% | |
| ACTTCTTCAACTTGACTTAC+AGG | - | chr5_2:2538077-2538096 | None:intergenic | 35.0% | |
| GAAAACCACCGAGTATATTA+TGG | - | chr5_2:2538138-2538157 | None:intergenic | 35.0% | |
| ! | ACAAATGGCTTCTCTTTTTG+TGG | + | chr5_2:2538160-2538179 | Msa0749140:CDS | 35.0% |
| ACTTAAAAAGTCCGACTCTA+AGG | + | chr5_2:2538316-2538335 | Msa0749140:CDS | 35.0% | |
| CTTAAAAAGTCCGACTCTAA+GGG | + | chr5_2:2538317-2538336 | Msa0749140:CDS | 35.0% | |
| !! | CTGGACTAGTTGAATGTTAT+AGG | + | chr5_2:2538402-2538421 | Msa0749140:CDS | 35.0% |
| ! | TCTGAGGTGTTTATGTATGT+AGG | + | chr5_2:2538518-2538537 | Msa0749140:CDS | 35.0% |
| ! | CTGAGGTGTTTATGTATGTA+GGG | + | chr5_2:2538519-2538538 | Msa0749140:CDS | 35.0% |
| CAACTATGTAAGTAGCTTAC+TGG | + | chr5_2:2538625-2538644 | Msa0749140:CDS | 35.0% | |
| ATCCCAGTAAACCTCAATAA+AGG | + | chr5_2:2538695-2538714 | Msa0749140:CDS | 35.0% | |
| GACCTTTATTGAGGTTTACT+GGG | - | chr5_2:2538700-2538719 | None:intergenic | 35.0% | |
| TGACCTTTATTGAGGTTTAC+TGG | - | chr5_2:2538701-2538720 | None:intergenic | 35.0% | |
| TATCTAGGTGACCTTTATTG+AGG | - | chr5_2:2538709-2538728 | None:intergenic | 35.0% | |
| TCAATAAAGGTCACCTAGAT+AGG | + | chr5_2:2538708-2538727 | Msa0749140:CDS | 35.0% | |
| AGAGGAAGTAAAACCTATCT+AGG | - | chr5_2:2538724-2538743 | None:intergenic | 35.0% | |
| AATTAAGTCCATCGATGTCA+AGG | - | chr5_2:2538753-2538772 | None:intergenic | 35.0% | |
| CCATTTGCTCACATTGTTAG+CGG | - | chr5_2:2536992-2537011 | None:intergenic | 40.0% | |
| AACAATGTGAGCAAATGGAC+TGG | + | chr5_2:2536994-2537013 | Msa0749140:CDS | 40.0% | |
| TTCCCCAATAAGAGTCACTT+AGG | - | chr5_2:2537053-2537072 | None:intergenic | 40.0% | |
| GATTCATTCCCACAACCTTT+AGG | - | chr5_2:2537268-2537287 | None:intergenic | 40.0% | |
| !! | AACATTCAAGTTGGGAGATG+GGG | + | chr5_2:2537302-2537321 | Msa0749140:CDS | 40.0% |
| TCGATCTATCTCATTGCCTT+GGG | + | chr5_2:2537337-2537356 | Msa0749140:CDS | 40.0% | |
| CAACCGAATATTGCCACATT+CGG | + | chr5_2:2537373-2537392 | Msa0749140:CDS | 40.0% | |
| AACCGAATATTGCCACATTC+GGG | + | chr5_2:2537374-2537393 | Msa0749140:CDS | 40.0% | |
| ATCCTCGAAATAGACGAGAA+TGG | - | chr5_2:2537503-2537522 | None:intergenic | 40.0% | |
| ATTTCGAGGATGAAGGAATG+TGG | + | chr5_2:2537512-2537531 | Msa0749140:CDS | 40.0% | |
| TTTCGAGGATGAAGGAATGT+GGG | + | chr5_2:2537513-2537532 | Msa0749140:CDS | 40.0% | |
| ! | GAGGATTTTTCTGTTCGCAT+CGG | - | chr5_2:2537746-2537765 | None:intergenic | 40.0% |
| AGAAAAATCCTCCACACAGA+CGG | + | chr5_2:2537754-2537773 | Msa0749140:CDS | 40.0% | |
| TACTGAGACTCCTTCCAATT+TGG | + | chr5_2:2538105-2538124 | Msa0749140:CDS | 40.0% | |
| ATTATGGTGCAGAGCCAAAT+TGG | - | chr5_2:2538122-2538141 | None:intergenic | 40.0% | |
| GCTCTGCACCATAATATACT+CGG | + | chr5_2:2538127-2538146 | Msa0749140:CDS | 40.0% | |
| TCGAATTCTCGATCCATTTG+TGG | + | chr5_2:2538289-2538308 | Msa0749140:CDS | 40.0% | |
| CGAATTCTCGATCCATTTGT+GGG | + | chr5_2:2538290-2538309 | Msa0749140:CDS | 40.0% | |
| GTAATAGCAATGGTTTCAGC+TGG | + | chr5_2:2538383-2538402 | Msa0749140:CDS | 40.0% | |
| ATCCCTCAGTATGCACTTAT+AGG | + | chr5_2:2538491-2538510 | Msa0749140:CDS | 40.0% | |
| CTCCTATAAGTGCATACTGA+GGG | - | chr5_2:2538496-2538515 | None:intergenic | 40.0% | |
| TTCAATGCTCAAACACCAGA+TGG | + | chr5_2:2538554-2538573 | Msa0749140:CDS | 40.0% | |
| CCAGATGGCTTAAAGAGTTT+CGG | + | chr5_2:2538569-2538588 | Msa0749140:CDS | 40.0% | |
| AGTTATGAAGATCTCTACGG+AGG | + | chr5_2:2538655-2538674 | Msa0749140:CDS | 40.0% | |
| CCACTTTGCACATGCAATAT+AGG | - | chr5_2:2538777-2538796 | None:intergenic | 40.0% | |
| CCTATATTGCATGTGCAAAG+TGG | + | chr5_2:2538774-2538793 | Msa0749140:CDS | 40.0% | |
| ! | TGGTACAAGAGTATACAGCT+GGG | + | chr5_2:2538794-2538813 | Msa0749140:CDS | 40.0% |
| CCATTTGCTCACATTGTTAG+CGG | - | chr5_2:2536992-2537011 | None:intergenic | 40.0% | |
| AACAATGTGAGCAAATGGAC+TGG | + | chr5_2:2536994-2537013 | Msa0749140:CDS | 40.0% | |
| TTCCCCAATAAGAGTCACTT+AGG | - | chr5_2:2537053-2537072 | None:intergenic | 40.0% | |
| GATTCATTCCCACAACCTTT+AGG | - | chr5_2:2537268-2537287 | None:intergenic | 40.0% | |
| !! | AACATTCAAGTTGGGAGATG+GGG | + | chr5_2:2537302-2537321 | Msa0749140:CDS | 40.0% |
| TCGATCTATCTCATTGCCTT+GGG | + | chr5_2:2537337-2537356 | Msa0749140:CDS | 40.0% | |
| CAACCGAATATTGCCACATT+CGG | + | chr5_2:2537373-2537392 | Msa0749140:CDS | 40.0% | |
| AACCGAATATTGCCACATTC+GGG | + | chr5_2:2537374-2537393 | Msa0749140:CDS | 40.0% | |
| ATCCTCGAAATAGACGAGAA+TGG | - | chr5_2:2537503-2537522 | None:intergenic | 40.0% | |
| ATTTCGAGGATGAAGGAATG+TGG | + | chr5_2:2537512-2537531 | Msa0749140:CDS | 40.0% | |
| TTTCGAGGATGAAGGAATGT+GGG | + | chr5_2:2537513-2537532 | Msa0749140:CDS | 40.0% | |
| ! | GAGGATTTTTCTGTTCGCAT+CGG | - | chr5_2:2537746-2537765 | None:intergenic | 40.0% |
| AGAAAAATCCTCCACACAGA+CGG | + | chr5_2:2537754-2537773 | Msa0749140:CDS | 40.0% | |
| TACTGAGACTCCTTCCAATT+TGG | + | chr5_2:2538105-2538124 | Msa0749140:CDS | 40.0% | |
| ATTATGGTGCAGAGCCAAAT+TGG | - | chr5_2:2538122-2538141 | None:intergenic | 40.0% | |
| GCTCTGCACCATAATATACT+CGG | + | chr5_2:2538127-2538146 | Msa0749140:CDS | 40.0% | |
| TCGAATTCTCGATCCATTTG+TGG | + | chr5_2:2538289-2538308 | Msa0749140:CDS | 40.0% | |
| CGAATTCTCGATCCATTTGT+GGG | + | chr5_2:2538290-2538309 | Msa0749140:CDS | 40.0% | |
| GTAATAGCAATGGTTTCAGC+TGG | + | chr5_2:2538383-2538402 | Msa0749140:CDS | 40.0% | |
| ATCCCTCAGTATGCACTTAT+AGG | + | chr5_2:2538491-2538510 | Msa0749140:CDS | 40.0% | |
| CTCCTATAAGTGCATACTGA+GGG | - | chr5_2:2538496-2538515 | None:intergenic | 40.0% | |
| TTCAATGCTCAAACACCAGA+TGG | + | chr5_2:2538554-2538573 | Msa0749140:CDS | 40.0% | |
| CCAGATGGCTTAAAGAGTTT+CGG | + | chr5_2:2538569-2538588 | Msa0749140:CDS | 40.0% | |
| AGTTATGAAGATCTCTACGG+AGG | + | chr5_2:2538655-2538674 | Msa0749140:CDS | 40.0% | |
| CCACTTTGCACATGCAATAT+AGG | - | chr5_2:2538777-2538796 | None:intergenic | 40.0% | |
| CCTATATTGCATGTGCAAAG+TGG | + | chr5_2:2538774-2538793 | Msa0749140:CDS | 40.0% | |
| ! | TGGTACAAGAGTATACAGCT+GGG | + | chr5_2:2538794-2538813 | Msa0749140:CDS | 40.0% |
| ! | CTGGCAACTCTGGCATTTTT+CGG | + | chr5_2:2536907-2536926 | Msa0749140:CDS | 45.0% |
| ! | TGGCAACTCTGGCATTTTTC+GGG | + | chr5_2:2536908-2536927 | Msa0749140:CDS | 45.0% |
| !!! | ACTCTGGCATTTTTCGGGAT+TGG | + | chr5_2:2536913-2536932 | Msa0749140:CDS | 45.0% |
| ACCTAGTGGTATTCCTGACA+AGG | + | chr5_2:2536941-2536960 | Msa0749140:CDS | 45.0% | |
| CCTAGTGGTATTCCTGACAA+GGG | + | chr5_2:2536942-2536961 | Msa0749140:CDS | 45.0% | |
| CCGCTAACAATGTGAGCAAA+TGG | + | chr5_2:2536989-2537008 | Msa0749140:CDS | 45.0% | |
| GAGGTACGATGACAAGGATA+AGG | - | chr5_2:2537233-2537252 | None:intergenic | 45.0% | |
| ! | CAAGAAGAGGTACGATGACA+AGG | - | chr5_2:2537239-2537258 | None:intergenic | 45.0% |
| CTCGATCTATCTCATTGCCT+TGG | + | chr5_2:2537336-2537355 | Msa0749140:CDS | 45.0% | |
| CGATCTATCTCATTGCCTTG+GGG | + | chr5_2:2537338-2537357 | Msa0749140:CDS | 45.0% | |
| TATCTCATTGCCTTGGGGAA+TGG | + | chr5_2:2537343-2537362 | Msa0749140:CDS | 45.0% | |
| CGAATGTGGCAATATTCGGT+TGG | - | chr5_2:2537375-2537394 | None:intergenic | 45.0% | |
| ACCGAATATTGCCACATTCG+GGG | + | chr5_2:2537375-2537394 | Msa0749140:CDS | 45.0% | |
| GAAGGAGGGTCACAATAAAG+TGG | + | chr5_2:2537423-2537442 | Msa0749140:CDS | 45.0% | |
| GTTGCCCAAAGTTCAAAGCT+AGG | - | chr5_2:2537468-2537487 | None:intergenic | 45.0% | |
| CACCATTCTCGTCTATTTCG+AGG | + | chr5_2:2537498-2537517 | Msa0749140:CDS | 45.0% | |
| CTCGTCTATTTCGAGGATGA+AGG | + | chr5_2:2537505-2537524 | Msa0749140:CDS | 45.0% | |
| GGCTTGAAATGTCGGTACTT+TGG | - | chr5_2:2537604-2537623 | None:intergenic | 45.0% | |
| TTGATGCAGCAACAAGGACT+TGG | - | chr5_2:2537654-2537673 | None:intergenic | 45.0% | |
| AAGTCCTTGTTGCTGCATCA+AGG | + | chr5_2:2537653-2537672 | Msa0749140:CDS | 45.0% | |
| CTTTCCTTGATGCAGCAACA+AGG | - | chr5_2:2537660-2537679 | None:intergenic | 45.0% | |
| ! | GATTTTTCTGTTCGCATCGG+TGG | - | chr5_2:2537743-2537762 | None:intergenic | 45.0% |
| GAAAAATCCTCCACACAGAC+GGG | + | chr5_2:2537755-2537774 | Msa0749140:CDS | 45.0% | |
| CTGTTTCATGCTTGCAGTCT+CGG | - | chr5_2:2537843-2537862 | None:intergenic | 45.0% | |
| CTGCACCATAATATACTCGG+TGG | + | chr5_2:2538130-2538149 | Msa0749140:CDS | 45.0% | |
| ! | CTCGGTGGTTTTCACACAAA+TGG | + | chr5_2:2538145-2538164 | Msa0749140:CDS | 45.0% |
| ! | GCTTCTCTTTTTGTGGAGCA+AGG | + | chr5_2:2538167-2538186 | Msa0749140:CDS | 45.0% |
| TCAAAGCAAGACATGCTAGC+TGG | - | chr5_2:2538233-2538252 | None:intergenic | 45.0% | |
| ACTTACGGAGCTTCAGAGAA+TGG | + | chr5_2:2538340-2538359 | Msa0749140:CDS | 45.0% | |
| CTTACGGAGCTTCAGAGAAT+GGG | + | chr5_2:2538341-2538360 | Msa0749140:CDS | 45.0% | |
| CGAGTACTTTGAGCATCTTC+TGG | + | chr5_2:2538465-2538484 | Msa0749140:CDS | 45.0% | |
| GCTCCTATAAGTGCATACTG+AGG | - | chr5_2:2538497-2538516 | None:intergenic | 45.0% | |
| TGCACTTATAGGAGCTTCTG+AGG | + | chr5_2:2538502-2538521 | Msa0749140:CDS | 45.0% | |
| CCGAAACTCTTTAAGCCATC+TGG | - | chr5_2:2538572-2538591 | None:intergenic | 45.0% | |
| TGCATGACATCCATTTCCCT+CGG | + | chr5_2:2538602-2538621 | Msa0749140:CDS | 45.0% | |
| TACATAGTTGCCGAGGGAAA+TGG | - | chr5_2:2538615-2538634 | None:intergenic | 45.0% | |
| GCTACTTACATAGTTGCCGA+GGG | - | chr5_2:2538621-2538640 | None:intergenic | 45.0% | |
| AGCTACTTACATAGTTGCCG+AGG | - | chr5_2:2538622-2538641 | None:intergenic | 45.0% | |
| TAAGTCCATCGATGTCAAGG+CGG | - | chr5_2:2538750-2538769 | None:intergenic | 45.0% | |
| ! | GTGGTACAAGAGTATACAGC+TGG | + | chr5_2:2538793-2538812 | Msa0749140:CDS | 45.0% |
| ! | CTGGCAACTCTGGCATTTTT+CGG | + | chr5_2:2536907-2536926 | Msa0749140:CDS | 45.0% |
| ! | TGGCAACTCTGGCATTTTTC+GGG | + | chr5_2:2536908-2536927 | Msa0749140:CDS | 45.0% |
| !!! | ACTCTGGCATTTTTCGGGAT+TGG | + | chr5_2:2536913-2536932 | Msa0749140:CDS | 45.0% |
| ACCTAGTGGTATTCCTGACA+AGG | + | chr5_2:2536941-2536960 | Msa0749140:CDS | 45.0% | |
| CCTAGTGGTATTCCTGACAA+GGG | + | chr5_2:2536942-2536961 | Msa0749140:CDS | 45.0% | |
| CCGCTAACAATGTGAGCAAA+TGG | + | chr5_2:2536989-2537008 | Msa0749140:CDS | 45.0% | |
| GAGGTACGATGACAAGGATA+AGG | - | chr5_2:2537233-2537252 | None:intergenic | 45.0% | |
| ! | CAAGAAGAGGTACGATGACA+AGG | - | chr5_2:2537239-2537258 | None:intergenic | 45.0% |
| CTCGATCTATCTCATTGCCT+TGG | + | chr5_2:2537336-2537355 | Msa0749140:CDS | 45.0% | |
| CGATCTATCTCATTGCCTTG+GGG | + | chr5_2:2537338-2537357 | Msa0749140:CDS | 45.0% | |
| TATCTCATTGCCTTGGGGAA+TGG | + | chr5_2:2537343-2537362 | Msa0749140:CDS | 45.0% | |
| CGAATGTGGCAATATTCGGT+TGG | - | chr5_2:2537375-2537394 | None:intergenic | 45.0% | |
| ACCGAATATTGCCACATTCG+GGG | + | chr5_2:2537375-2537394 | Msa0749140:CDS | 45.0% | |
| GAAGGAGGGTCACAATAAAG+TGG | + | chr5_2:2537423-2537442 | Msa0749140:CDS | 45.0% | |
| GTTGCCCAAAGTTCAAAGCT+AGG | - | chr5_2:2537468-2537487 | None:intergenic | 45.0% | |
| CACCATTCTCGTCTATTTCG+AGG | + | chr5_2:2537498-2537517 | Msa0749140:CDS | 45.0% | |
| CTCGTCTATTTCGAGGATGA+AGG | + | chr5_2:2537505-2537524 | Msa0749140:CDS | 45.0% | |
| GGCTTGAAATGTCGGTACTT+TGG | - | chr5_2:2537604-2537623 | None:intergenic | 45.0% | |
| TTGATGCAGCAACAAGGACT+TGG | - | chr5_2:2537654-2537673 | None:intergenic | 45.0% | |
| AAGTCCTTGTTGCTGCATCA+AGG | + | chr5_2:2537653-2537672 | Msa0749140:CDS | 45.0% | |
| CTTTCCTTGATGCAGCAACA+AGG | - | chr5_2:2537660-2537679 | None:intergenic | 45.0% | |
| ! | GATTTTTCTGTTCGCATCGG+TGG | - | chr5_2:2537743-2537762 | None:intergenic | 45.0% |
| GAAAAATCCTCCACACAGAC+GGG | + | chr5_2:2537755-2537774 | Msa0749140:CDS | 45.0% | |
| CTGTTTCATGCTTGCAGTCT+CGG | - | chr5_2:2537843-2537862 | None:intergenic | 45.0% | |
| CTGCACCATAATATACTCGG+TGG | + | chr5_2:2538130-2538149 | Msa0749140:CDS | 45.0% | |
| ! | CTCGGTGGTTTTCACACAAA+TGG | + | chr5_2:2538145-2538164 | Msa0749140:CDS | 45.0% |
| ! | GCTTCTCTTTTTGTGGAGCA+AGG | + | chr5_2:2538167-2538186 | Msa0749140:CDS | 45.0% |
| TCAAAGCAAGACATGCTAGC+TGG | - | chr5_2:2538233-2538252 | None:intergenic | 45.0% | |
| ACTTACGGAGCTTCAGAGAA+TGG | + | chr5_2:2538340-2538359 | Msa0749140:CDS | 45.0% | |
| CTTACGGAGCTTCAGAGAAT+GGG | + | chr5_2:2538341-2538360 | Msa0749140:CDS | 45.0% | |
| CGAGTACTTTGAGCATCTTC+TGG | + | chr5_2:2538465-2538484 | Msa0749140:CDS | 45.0% | |
| GCTCCTATAAGTGCATACTG+AGG | - | chr5_2:2538497-2538516 | None:intergenic | 45.0% | |
| TGCACTTATAGGAGCTTCTG+AGG | + | chr5_2:2538502-2538521 | Msa0749140:CDS | 45.0% | |
| CCGAAACTCTTTAAGCCATC+TGG | - | chr5_2:2538572-2538591 | None:intergenic | 45.0% | |
| TGCATGACATCCATTTCCCT+CGG | + | chr5_2:2538602-2538621 | Msa0749140:CDS | 45.0% | |
| TACATAGTTGCCGAGGGAAA+TGG | - | chr5_2:2538615-2538634 | None:intergenic | 45.0% | |
| GCTACTTACATAGTTGCCGA+GGG | - | chr5_2:2538621-2538640 | None:intergenic | 45.0% | |
| AGCTACTTACATAGTTGCCG+AGG | - | chr5_2:2538622-2538641 | None:intergenic | 45.0% | |
| TAAGTCCATCGATGTCAAGG+CGG | - | chr5_2:2538750-2538769 | None:intergenic | 45.0% | |
| ! | GTGGTACAAGAGTATACAGC+TGG | + | chr5_2:2538793-2538812 | Msa0749140:CDS | 45.0% |
| ATGCCAGAGTTGCCAGACAT+TGG | - | chr5_2:2536903-2536922 | None:intergenic | 50.0% | |
| CCCTTGTCAGGAATACCACT+AGG | - | chr5_2:2536945-2536964 | None:intergenic | 50.0% | |
| AGTGGTATTCCTGACAAGGG+TGG | + | chr5_2:2536945-2536964 | Msa0749140:CDS | 50.0% | |
| GTATTCCTGACAAGGGTGGT+AGG | + | chr5_2:2536949-2536968 | Msa0749140:CDS | 50.0% | |
| TTTGTCCTACCACCCTTGTC+AGG | - | chr5_2:2536957-2536976 | None:intergenic | 50.0% | |
| ! | TTGGTAACCTCCATTCCCCA+AGG | - | chr5_2:2537356-2537375 | None:intergenic | 50.0% |
| GCCCCGAATGTGGCAATATT+CGG | - | chr5_2:2537379-2537398 | None:intergenic | 50.0% | |
| AAACTGATCAGCCCCGAATG+TGG | - | chr5_2:2537389-2537408 | None:intergenic | 50.0% | |
| GATGAAGGAATGTGGGCTCT+TGG | + | chr5_2:2537520-2537539 | Msa0749140:CDS | 50.0% | |
| TACCGACATTTCAAGCCCAG+TGG | + | chr5_2:2537607-2537626 | Msa0749140:CDS | 50.0% | |
| TGCCACTGGGCTTGAAATGT+CGG | - | chr5_2:2537612-2537631 | None:intergenic | 50.0% | |
| AACAAGGACTTGGCAGAACC+TGG | - | chr5_2:2537644-2537663 | None:intergenic | 50.0% | |
| CTTACTTGAACCCGTCTGTG+TGG | - | chr5_2:2537768-2537787 | None:intergenic | 50.0% | |
| TTACAGGACAGAGACGCCAT+GGG | - | chr5_2:2538061-2538080 | None:intergenic | 50.0% | |
| TGGTGCAGAGCCAAATTGGA+AGG | - | chr5_2:2538118-2538137 | None:intergenic | 50.0% | |
| AAGCAAGACATGCTAGCTGG+TGG | - | chr5_2:2538230-2538249 | None:intergenic | 50.0% | |
| ! | GTCCGACTCTAAGGGACTTA+CGG | + | chr5_2:2538325-2538344 | Msa0749140:CDS | 50.0% |
| CTCCGTAAGTCCCTTAGAGT+CGG | - | chr5_2:2538330-2538349 | None:intergenic | 50.0% | |
| GAGCTTCAGAGAATGGGAGT+TGG | + | chr5_2:2538347-2538366 | Msa0749140:CDS | 50.0% | |
| AAGTACTCGAGCCTTTGCAG+TGG | - | chr5_2:2538454-2538473 | None:intergenic | 50.0% | |
| CGCAAAGAGAATGATGAGCC+AGG | + | chr5_2:2538824-2538843 | Msa0749140:CDS | 50.0% | |
| ATGCCAGAGTTGCCAGACAT+TGG | - | chr5_2:2536903-2536922 | None:intergenic | 50.0% | |
| CCCTTGTCAGGAATACCACT+AGG | - | chr5_2:2536945-2536964 | None:intergenic | 50.0% | |
| AGTGGTATTCCTGACAAGGG+TGG | + | chr5_2:2536945-2536964 | Msa0749140:CDS | 50.0% | |
| GTATTCCTGACAAGGGTGGT+AGG | + | chr5_2:2536949-2536968 | Msa0749140:CDS | 50.0% | |
| TTTGTCCTACCACCCTTGTC+AGG | - | chr5_2:2536957-2536976 | None:intergenic | 50.0% | |
| ! | TTGGTAACCTCCATTCCCCA+AGG | - | chr5_2:2537356-2537375 | None:intergenic | 50.0% |
| GCCCCGAATGTGGCAATATT+CGG | - | chr5_2:2537379-2537398 | None:intergenic | 50.0% | |
| AAACTGATCAGCCCCGAATG+TGG | - | chr5_2:2537389-2537408 | None:intergenic | 50.0% | |
| GATGAAGGAATGTGGGCTCT+TGG | + | chr5_2:2537520-2537539 | Msa0749140:CDS | 50.0% | |
| TACCGACATTTCAAGCCCAG+TGG | + | chr5_2:2537607-2537626 | Msa0749140:CDS | 50.0% | |
| TGCCACTGGGCTTGAAATGT+CGG | - | chr5_2:2537612-2537631 | None:intergenic | 50.0% | |
| AACAAGGACTTGGCAGAACC+TGG | - | chr5_2:2537644-2537663 | None:intergenic | 50.0% | |
| CTTACTTGAACCCGTCTGTG+TGG | - | chr5_2:2537768-2537787 | None:intergenic | 50.0% | |
| TTACAGGACAGAGACGCCAT+GGG | - | chr5_2:2538061-2538080 | None:intergenic | 50.0% | |
| TGGTGCAGAGCCAAATTGGA+AGG | - | chr5_2:2538118-2538137 | None:intergenic | 50.0% | |
| AAGCAAGACATGCTAGCTGG+TGG | - | chr5_2:2538230-2538249 | None:intergenic | 50.0% | |
| ! | GTCCGACTCTAAGGGACTTA+CGG | + | chr5_2:2538325-2538344 | Msa0749140:CDS | 50.0% |
| CTCCGTAAGTCCCTTAGAGT+CGG | - | chr5_2:2538330-2538349 | None:intergenic | 50.0% | |
| GAGCTTCAGAGAATGGGAGT+TGG | + | chr5_2:2538347-2538366 | Msa0749140:CDS | 50.0% | |
| AAGTACTCGAGCCTTTGCAG+TGG | - | chr5_2:2538454-2538473 | None:intergenic | 50.0% | |
| CGCAAAGAGAATGATGAGCC+AGG | + | chr5_2:2538824-2538843 | Msa0749140:CDS | 50.0% | |
| CGGGATTGGAGTGAACCTAG+TGG | + | chr5_2:2536927-2536946 | Msa0749140:CDS | 55.0% | |
| CTCATTGCCTTGGGGAATGG+AGG | + | chr5_2:2537346-2537365 | Msa0749140:CDS | 55.0% | |
| !! | GTTTGACGAGGAGCACTCGA+AGG | + | chr5_2:2537405-2537424 | Msa0749140:CDS | 55.0% |
| GAATGTGGGCTCTTGGCTTC+TGG | + | chr5_2:2537527-2537546 | Msa0749140:CDS | 55.0% | |
| CTTGGCAGAACCTGGCAAGA+GGG | - | chr5_2:2537636-2537655 | None:intergenic | 55.0% | |
| ACTTGGCAGAACCTGGCAAG+AGG | - | chr5_2:2537637-2537656 | None:intergenic | 55.0% | |
| ACTTGAACCCGTCTGTGTGG+AGG | - | chr5_2:2537765-2537784 | None:intergenic | 55.0% | |
| CTTACAGGACAGAGACGCCA+TGG | - | chr5_2:2538062-2538081 | None:intergenic | 55.0% | |
| TACTCGAGCCTTTGCAGTGG+CGG | - | chr5_2:2538451-2538470 | None:intergenic | 55.0% | |
| CTCTACGGAGGATCACATGC+CGG | + | chr5_2:2538667-2538686 | Msa0749140:CDS | 55.0% | |
| TCTACGGAGGATCACATGCC+GGG | + | chr5_2:2538668-2538687 | Msa0749140:CDS | 55.0% | |
| AGGTTTACTGGGATCCACCC+CGG | - | chr5_2:2538689-2538708 | None:intergenic | 55.0% | |
| TCGATGTCAAGGCGGCTAAG+AGG | - | chr5_2:2538742-2538761 | None:intergenic | 55.0% | |
| CTTAGCCGCCTTGACATCGA+TGG | + | chr5_2:2538742-2538761 | Msa0749140:CDS | 55.0% | |
| CGGGATTGGAGTGAACCTAG+TGG | + | chr5_2:2536927-2536946 | Msa0749140:CDS | 55.0% | |
| CTCATTGCCTTGGGGAATGG+AGG | + | chr5_2:2537346-2537365 | Msa0749140:CDS | 55.0% | |
| !! | GTTTGACGAGGAGCACTCGA+AGG | + | chr5_2:2537405-2537424 | Msa0749140:CDS | 55.0% |
| GAATGTGGGCTCTTGGCTTC+TGG | + | chr5_2:2537527-2537546 | Msa0749140:CDS | 55.0% | |
| CTTGGCAGAACCTGGCAAGA+GGG | - | chr5_2:2537636-2537655 | None:intergenic | 55.0% | |
| ACTTGGCAGAACCTGGCAAG+AGG | - | chr5_2:2537637-2537656 | None:intergenic | 55.0% | |
| ACTTGAACCCGTCTGTGTGG+AGG | - | chr5_2:2537765-2537784 | None:intergenic | 55.0% | |
| CTTACAGGACAGAGACGCCA+TGG | - | chr5_2:2538062-2538081 | None:intergenic | 55.0% | |
| TACTCGAGCCTTTGCAGTGG+CGG | - | chr5_2:2538451-2538470 | None:intergenic | 55.0% | |
| CTCTACGGAGGATCACATGC+CGG | + | chr5_2:2538667-2538686 | Msa0749140:CDS | 55.0% | |
| TCTACGGAGGATCACATGCC+GGG | + | chr5_2:2538668-2538687 | Msa0749140:CDS | 55.0% | |
| AGGTTTACTGGGATCCACCC+CGG | - | chr5_2:2538689-2538708 | None:intergenic | 55.0% | |
| TCGATGTCAAGGCGGCTAAG+AGG | - | chr5_2:2538742-2538761 | None:intergenic | 55.0% | |
| CTTAGCCGCCTTGACATCGA+TGG | + | chr5_2:2538742-2538761 | Msa0749140:CDS | 55.0% | |
| CGGGGCTGATCAGTTTGACG+AGG | + | chr5_2:2537393-2537412 | Msa0749140:CDS | 60.0% | |
| !! | TGACGAGGAGCACTCGAAGG+AGG | + | chr5_2:2537408-2537427 | Msa0749140:CDS | 60.0% |
| !! | GACGAGGAGCACTCGAAGGA+GGG | + | chr5_2:2537409-2537428 | Msa0749140:CDS | 60.0% |
| ! | CTTGGCTTCTGGCTGTCTGC+AGG | + | chr5_2:2537538-2537557 | Msa0749140:CDS | 60.0% |
| CTGGCAAGAGGGTTGCCACT+GGG | - | chr5_2:2537625-2537644 | None:intergenic | 60.0% | |
| GGTTGGAACAGGCGCCTTTC+TGG | - | chr5_2:2538040-2538059 | None:intergenic | 60.0% | |
| ! | AAGGCGCCTGTTCCAACCCA+TGG | + | chr5_2:2538042-2538061 | Msa0749140:CDS | 60.0% |
| !! | GAGACGCCATGGGTTGGAAC+AGG | - | chr5_2:2538051-2538070 | None:intergenic | 60.0% |
| AGGACAGAGACGCCATGGGT+TGG | - | chr5_2:2538057-2538076 | None:intergenic | 60.0% | |
| CTTTGCAGTGGCGGCAGTCT+TGG | - | chr5_2:2538442-2538461 | None:intergenic | 60.0% | |
| CAAGACTGCCGCCACTGCAA+AGG | + | chr5_2:2538440-2538459 | Msa0749140:CDS | 60.0% | |
| CTACGGAGGATCACATGCCG+GGG | + | chr5_2:2538669-2538688 | Msa0749140:CDS | 60.0% | |
| CGGGGCTGATCAGTTTGACG+AGG | + | chr5_2:2537393-2537412 | Msa0749140:CDS | 60.0% | |
| !! | TGACGAGGAGCACTCGAAGG+AGG | + | chr5_2:2537408-2537427 | Msa0749140:CDS | 60.0% |
| !! | GACGAGGAGCACTCGAAGGA+GGG | + | chr5_2:2537409-2537428 | Msa0749140:CDS | 60.0% |
| ! | CTTGGCTTCTGGCTGTCTGC+AGG | + | chr5_2:2537538-2537557 | Msa0749140:CDS | 60.0% |
| CTGGCAAGAGGGTTGCCACT+GGG | - | chr5_2:2537625-2537644 | None:intergenic | 60.0% | |
| GGTTGGAACAGGCGCCTTTC+TGG | - | chr5_2:2538040-2538059 | None:intergenic | 60.0% | |
| ! | AAGGCGCCTGTTCCAACCCA+TGG | + | chr5_2:2538042-2538061 | Msa0749140:CDS | 60.0% |
| !! | GAGACGCCATGGGTTGGAAC+AGG | - | chr5_2:2538051-2538070 | None:intergenic | 60.0% |
| AGGACAGAGACGCCATGGGT+TGG | - | chr5_2:2538057-2538076 | None:intergenic | 60.0% | |
| CTTTGCAGTGGCGGCAGTCT+TGG | - | chr5_2:2538442-2538461 | None:intergenic | 60.0% | |
| CAAGACTGCCGCCACTGCAA+AGG | + | chr5_2:2538440-2538459 | Msa0749140:CDS | 60.0% | |
| CTACGGAGGATCACATGCCG+GGG | + | chr5_2:2538669-2538688 | Msa0749140:CDS | 60.0% | |
| CCTGGCAAGAGGGTTGCCAC+TGG | - | chr5_2:2537626-2537645 | None:intergenic | 65.0% | |
| CCAGTGGCAACCCTCTTGCC+AGG | + | chr5_2:2537623-2537642 | Msa0749140:CDS | 65.0% | |
| CCTGGCAAGAGGGTTGCCAC+TGG | - | chr5_2:2537626-2537645 | None:intergenic | 65.0% | |
| CCAGTGGCAACCCTCTTGCC+AGG | + | chr5_2:2537623-2537642 | Msa0749140:CDS | 65.0% | |
| CGGAGGATCACATGCCGGGG+TGG | + | chr5_2:2538672-2538691 | Msa0749140:CDS | 70.0% | |
| CGGAGGATCACATGCCGGGG+TGG | + | chr5_2:2538672-2538691 | Msa0749140:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 2536898 | 2538862 | 2536898 | ID=Msa0749140;Name=Msa0749140 |
| chr5_2 | mRNA | 2536898 | 2538862 | 2536898 | ID=Msa0749140-mRNA-1;Parent=Msa0749140;Name=Msa0749140-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0|0|1|1|1|3|0|544 |
| chr5_2 | exon | 2536898 | 2537098 | 2536898 | ID=Msa0749140-mRNA-1:exon:782;Parent=Msa0749140-mRNA-1 |
| chr5_2 | exon | 2537220 | 2537782 | 2537220 | ID=Msa0749140-mRNA-1:exon:783;Parent=Msa0749140-mRNA-1 |
| chr5_2 | exon | 2537992 | 2538862 | 2537992 | ID=Msa0749140-mRNA-1:exon:784;Parent=Msa0749140-mRNA-1 |
| chr5_2 | CDS | 2536898 | 2537098 | 2536898 | ID=Msa0749140-mRNA-1:cds;Parent=Msa0749140-mRNA-1 |
| chr5_2 | CDS | 2537220 | 2537782 | 2537220 | ID=Msa0749140-mRNA-1:cds;Parent=Msa0749140-mRNA-1 |
| chr5_2 | CDS | 2537992 | 2538862 | 2537992 | ID=Msa0749140-mRNA-1:cds;Parent=Msa0749140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
