Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792890 | RHN53852.1 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792890 | sp|Q9LQL2|PTR14_ARATH | 73.710 | 601 | 148 | 3 | 1 | 598 | 1 | 594 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792890 | A0A396HKH9 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0792890 | 0.825627 | 4.229313e-54 | -8.615850e-47 |
| Msa0004990 | Msa0792890 | 0.808262 | 3.376440e-50 | -8.615850e-47 |
| Msa0014280 | Msa0792890 | 0.801994 | 6.923227e-49 | -8.615850e-47 |
| Msa0044120 | Msa0792890 | 0.815858 | 7.454491e-52 | -8.615850e-47 |
| Msa0053040 | Msa0792890 | 0.811564 | 6.573890e-51 | -8.615850e-47 |
| Msa0080100 | Msa0792890 | -0.802904 | 4.496523e-49 | -8.615850e-47 |
| Msa0095910 | Msa0792890 | 0.802295 | 6.004572e-49 | -8.615850e-47 |
| Msa0098380 | Msa0792890 | 0.820326 | 7.275515e-53 | -8.615850e-47 |
| Msa0107830 | Msa0792890 | 0.829680 | 4.495061e-55 | -8.615850e-47 |
| Msa0614960 | Msa0792890 | 0.811696 | 6.151621e-51 | -8.615850e-47 |
| Msa0629030 | Msa0792890 | 0.850282 | 1.877712e-60 | -8.615850e-47 |
| Msa0629040 | Msa0792890 | 0.800497 | 1.401777e-48 | -8.615850e-47 |
| Msa0651820 | Msa0792890 | 0.811329 | 7.392720e-51 | -8.615850e-47 |
| Msa0652590 | Msa0792890 | 0.827700 | 1.353228e-54 | -8.615850e-47 |
| Msa0655370 | Msa0792890 | 0.817178 | 3.773262e-52 | -8.615850e-47 |
| Msa0657260 | Msa0792890 | 0.823385 | 1.424907e-53 | -8.615850e-47 |
| Msa0666580 | Msa0792890 | 0.851369 | 9.282548e-61 | -8.615850e-47 |
| Msa0699170 | Msa0792890 | 0.813280 | 2.772305e-51 | -8.615850e-47 |
| Msa0701490 | Msa0792890 | 0.824691 | 7.037813e-54 | -8.615850e-47 |
| Msa0701560 | Msa0792890 | 0.825829 | 3.785903e-54 | -8.615850e-47 |
| Msa0716620 | Msa0792890 | 0.823352 | 1.450727e-53 | -8.615850e-47 |
| Msa0727230 | Msa0792890 | 0.812096 | 5.033460e-51 | -8.615850e-47 |
| Msa0728520 | Msa0792890 | 0.808162 | 3.547207e-50 | -8.615850e-47 |
| Msa0743370 | Msa0792890 | 0.807238 | 5.572301e-50 | -8.615850e-47 |
| Msa0744550 | Msa0792890 | 0.803406 | 3.539171e-49 | -8.615850e-47 |
| Msa0744560 | Msa0792890 | 0.803183 | 3.937253e-49 | -8.615850e-47 |
| Msa0744710 | Msa0792890 | 0.807137 | 5.855381e-50 | -8.615850e-47 |
| Msa0747710 | Msa0792890 | 0.816478 | 5.418069e-52 | -8.615850e-47 |
| Msa0749140 | Msa0792890 | 0.993915 | 3.650557e-203 | -8.615850e-47 |
| Msa0750790 | Msa0792890 | 0.834090 | 3.663465e-56 | -8.615850e-47 |
| Msa0750830 | Msa0792890 | 0.831648 | 1.481992e-55 | -8.615850e-47 |
| Msa0753410 | Msa0792890 | 0.820536 | 6.513446e-53 | -8.615850e-47 |
| Msa0772350 | Msa0792890 | 0.838782 | 2.344272e-57 | -8.615850e-47 |
| Msa0776540 | Msa0792890 | 0.806059 | 9.887900e-50 | -8.615850e-47 |
| Msa0777600 | Msa0792890 | 0.802837 | 4.641455e-49 | -8.615850e-47 |
| Msa0792890 | Msa0793270 | 0.807069 | 6.050714e-50 | -8.615850e-47 |
| Msa0792890 | Msa0794200 | 0.839750 | 1.314259e-57 | -8.615850e-47 |
| Msa0792890 | Msa0794240 | 0.811271 | 7.610875e-51 | -8.615850e-47 |
| Msa0792890 | Msa0795320 | 0.836181 | 1.087419e-56 | -8.615850e-47 |
| Msa0792890 | Msa0795330 | 0.809108 | 2.226821e-50 | -8.615850e-47 |
| Msa0792890 | Msa0799110 | 0.802806 | 4.710857e-49 | -8.615850e-47 |
| Msa0792890 | Msa0799120 | 0.802890 | 4.525552e-49 | -8.615850e-47 |
| Msa0792890 | Msa0826240 | 0.813256 | 2.806195e-51 | -8.615850e-47 |
| Msa0792890 | Msa0826360 | 0.810403 | 1.173097e-50 | -8.615850e-47 |
| Msa0792890 | Msa0828910 | 0.998495 | 9.272731e-267 | -8.615850e-47 |
| Msa0792890 | Msa0865830 | 0.816262 | 6.054905e-52 | -8.615850e-47 |
| Msa0792890 | Msa0874750 | 0.842380 | 2.678429e-58 | -8.615850e-47 |
| Msa0792890 | Msa0878090 | -0.800875 | 1.174049e-48 | -8.615850e-47 |
| Msa0792890 | Msa0910560 | 0.828370 | 9.338043e-55 | -8.615850e-47 |
| Msa0792890 | Msa0910590 | 0.834622 | 2.693878e-56 | -8.615850e-47 |
| Msa0792890 | Msa0948430 | 0.841172 | 5.583090e-58 | -8.615850e-47 |
| Msa0792890 | Msa0976400 | 0.857272 | 1.826999e-62 | -8.615850e-47 |
| Msa0792890 | Msa0985380 | 0.844913 | 5.629891e-59 | -8.615850e-47 |
| Msa0792890 | Msa1023430 | 0.849763 | 2.623790e-60 | -8.615850e-47 |
| Msa0792890 | Msa1030210 | 0.805611 | 1.227824e-49 | -8.615850e-47 |
| Msa0792890 | Msa1031060 | 0.803773 | 2.970794e-49 | -8.615850e-47 |
| Msa0792890 | Msa1035050 | 0.831224 | 1.884611e-55 | -8.615850e-47 |
| Msa0792890 | Msa1040330 | 0.803061 | 4.172523e-49 | -8.615850e-47 |
| Msa0792890 | Msa1061840 | 0.836377 | 9.696157e-57 | -8.615850e-47 |
| Msa0792890 | Msa1069250 | 0.821912 | 3.136274e-53 | -8.615850e-47 |
| Msa0792890 | Msa1071350 | 0.807926 | 3.981194e-50 | -8.615850e-47 |
| Msa0792890 | Msa1075090 | 0.817253 | 3.629323e-52 | -8.615850e-47 |
| Msa0792890 | Msa1085820 | 0.845489 | 3.933339e-59 | -8.615850e-47 |
| Msa0792890 | Msa1107220 | 0.800401 | 1.466413e-48 | -8.615850e-47 |
| Msa0792890 | Msa1107510 | 0.844886 | 5.727004e-59 | -8.615850e-47 |
| Msa0792890 | Msa1110900 | 0.819054 | 1.420316e-52 | -8.615850e-47 |
| Msa0792890 | Msa1119670 | 0.802030 | 6.805613e-49 | -8.615850e-47 |
| Msa0792890 | Msa1131120 | 0.815605 | 8.487950e-52 | -8.615850e-47 |
| Msa0792890 | Msa1136630 | 0.800527 | 1.382378e-48 | -8.615850e-47 |
| Msa0792890 | Msa1137750 | 0.807927 | 3.980025e-50 | -8.615850e-47 |
| Msa0792890 | Msa1151070 | 0.836804 | 7.547991e-57 | -8.615850e-47 |
| Msa0792890 | Msa1185270 | 0.804450 | 2.147714e-49 | -8.615850e-47 |
| Msa0792890 | Msa1191270 | 0.805298 | 1.427848e-49 | -8.615850e-47 |
| Msa0792890 | Msa1202110 | 0.821395 | 4.129793e-53 | -8.615850e-47 |
| Msa0792890 | Msa1211610 | 0.803721 | 3.044711e-49 | -8.615850e-47 |
| Msa0792890 | Msa1235960 | -0.801321 | 9.515056e-49 | -8.615850e-47 |
| Msa0792890 | Msa1235990 | -0.803320 | 3.688379e-49 | -8.615850e-47 |
| Msa0792890 | Msa1239190 | 0.809862 | 1.534121e-50 | -8.615850e-47 |
| Msa0792890 | Msa1254870 | 0.820316 | 7.316793e-53 | -8.615850e-47 |
| Msa0792890 | Msa1262320 | 0.807138 | 5.852194e-50 | -8.615850e-47 |
| Msa0792890 | Msa1292560 | 0.810671 | 1.026302e-50 | -8.615850e-47 |
| Msa0792890 | Msa1328430 | 0.819452 | 1.152868e-52 | -8.615850e-47 |
| Msa0792890 | Msa1349420 | 0.812912 | 3.339330e-51 | -8.615850e-47 |
| Msa0792890 | Msa1364690 | 0.835836 | 1.330809e-56 | -8.615850e-47 |
| Msa0792890 | Msa1369720 | 0.827198 | 1.786232e-54 | -8.615850e-47 |
| Msa0792890 | Msa1390200 | 0.800145 | 1.653668e-48 | -8.615850e-47 |
| Msa0792890 | Msa1398120 | 0.830725 | 2.498369e-55 | -8.615850e-47 |
| Msa0792890 | Msa1405040 | -0.808152 | 3.564432e-50 | -8.615850e-47 |
| Msa0792890 | Msa1437590 | 0.837534 | 4.911880e-57 | -8.615850e-47 |
| Msa0792890 | Msa1447140 | 0.810245 | 1.268777e-50 | -8.615850e-47 |
| Msa0792890 | Msa1453890 | 0.814399 | 1.571340e-51 | -8.615850e-47 |
| Msa0792890 | Msa1463640 | 0.800411 | 1.459562e-48 | -8.615850e-47 |
| Msa0129290 | Msa0792890 | 0.842078 | 3.220219e-58 | -8.615850e-47 |
| Msa0183730 | Msa0792890 | 0.811800 | 5.839783e-51 | -8.615850e-47 |
| Msa0186240 | Msa0792890 | 0.802205 | 6.266591e-49 | -8.615850e-47 |
| Msa0191470 | Msa0792890 | 0.815498 | 8.964667e-52 | -8.615850e-47 |
| Msa0196420 | Msa0792890 | 0.815018 | 1.145897e-51 | -8.615850e-47 |
| Msa0200090 | Msa0792890 | 0.830752 | 2.460110e-55 | -8.615850e-47 |
| Msa0238330 | Msa0792890 | 0.819578 | 1.078807e-52 | -8.615850e-47 |
| Msa0390200 | Msa0792890 | 0.826637 | 2.432197e-54 | -8.615850e-47 |
| Msa0421080 | Msa0792890 | 0.808308 | 3.301634e-50 | -8.615850e-47 |
| Msa0433090 | Msa0792890 | 0.835893 | 1.286738e-56 | -8.615850e-47 |
| Msa0434910 | Msa0792890 | 0.801777 | 7.671008e-49 | -8.615850e-47 |
| Msa0242720 | Msa0792890 | 0.800365 | 1.491387e-48 | -8.615850e-47 |
| Msa0257760 | Msa0792890 | 0.801275 | 9.722030e-49 | -8.615850e-47 |
| Msa0267700 | Msa0792890 | 0.827282 | 1.704859e-54 | -8.615850e-47 |
| Msa0271700 | Msa0792890 | 0.838735 | 2.409776e-57 | -8.615850e-47 |
| Msa0271720 | Msa0792890 | 0.829259 | 5.688334e-55 | -8.615850e-47 |
| Msa0275730 | Msa0792890 | 0.820364 | 7.134153e-53 | -8.615850e-47 |
| Msa0310190 | Msa0792890 | 0.810297 | 1.236524e-50 | -8.615850e-47 |
| Msa0312300 | Msa0792890 | 0.814794 | 1.284970e-51 | -8.615850e-47 |
| Msa0320130 | Msa0792890 | 0.803583 | 3.252600e-49 | -8.615850e-47 |
| Msa0320140 | Msa0792890 | 0.810486 | 1.125508e-50 | -8.615850e-47 |
| Msa0324810 | Msa0792890 | 0.805671 | 1.192993e-49 | -8.615850e-47 |
| Msa0336550 | Msa0792890 | -0.800876 | 1.173058e-48 | -8.615850e-47 |
| Msa0493870 | Msa0792890 | 0.806922 | 6.499871e-50 | -8.615850e-47 |
| Msa0510870 | Msa0792890 | 0.809357 | 1.969592e-50 | -8.615850e-47 |
| Msa0522170 | Msa0792890 | 0.800331 | 1.515545e-48 | -8.615850e-47 |
| Msa0524710 | Msa0792890 | 0.836985 | 6.785889e-57 | -8.615850e-47 |
| Msa0554770 | Msa0792890 | -0.805408 | 1.354450e-49 | -8.615850e-47 |
| Msa0561830 | Msa0792890 | 0.821295 | 4.356565e-53 | -8.615850e-47 |
| Msa0565120 | Msa0792890 | 0.814160 | 1.774268e-51 | -8.615850e-47 |
| Msa0588730 | Msa0792890 | 0.822083 | 2.863993e-53 | -8.615850e-47 |
| Msa0594250 | Msa0792890 | 0.801957 | 7.044780e-49 | -8.615850e-47 |
| Msa0597820 | Msa0792890 | 0.811443 | 6.983562e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792890 | MtrunA17_Chr5g0400371 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Msa0792890 | MtrunA17_Chr4g0054891 | 80.000 | 605 | 108 | 3 | 1 | 605 | 77 | 668 | 0.0 | 1003 |
| Msa0792890 | MtrunA17_Chr7g0217461 | 68.089 | 586 | 173 | 5 | 23 | 597 | 5 | 587 | 0.0 | 803 |
| Msa0792890 | MtrunA17_Chr1g0213711 | 59.310 | 580 | 221 | 8 | 20 | 599 | 4 | 568 | 0.0 | 685 |
| Msa0792890 | MtrunA17_Chr7g0214461 | 60.579 | 553 | 208 | 5 | 36 | 588 | 72 | 614 | 0.0 | 680 |
| Msa0792890 | MtrunA17_Chr7g0218851 | 59.720 | 571 | 213 | 7 | 36 | 599 | 40 | 600 | 0.0 | 659 |
| Msa0792890 | MtrunA17_Chr4g0011471 | 53.832 | 535 | 240 | 3 | 56 | 588 | 30 | 559 | 0.0 | 588 |
| Msa0792890 | MtrunA17_Chr4g0011041 | 47.595 | 582 | 298 | 4 | 10 | 588 | 4 | 581 | 0.0 | 548 |
| Msa0792890 | MtrunA17_Chr8g0375311 | 43.471 | 582 | 323 | 4 | 6 | 586 | 4 | 580 | 8.35e-178 | 516 |
| Msa0792890 | MtrunA17_Chr8g0375351 | 43.739 | 567 | 313 | 4 | 21 | 586 | 19 | 580 | 2.29e-169 | 494 |
| Msa0792890 | MtrunA17_Chr8g0375291 | 43.253 | 578 | 320 | 5 | 8 | 582 | 4 | 576 | 2.34e-169 | 494 |
| Msa0792890 | MtrunA17_Chr3g0104011 | 44.425 | 565 | 305 | 5 | 23 | 585 | 3 | 560 | 3.56e-169 | 493 |
| Msa0792890 | MtrunA17_Chr8g0375341 | 43.034 | 567 | 317 | 4 | 21 | 586 | 19 | 580 | 1.27e-168 | 493 |
| Msa0792890 | MtrunA17_Chr7g0241741 | 43.009 | 565 | 313 | 5 | 23 | 586 | 3 | 559 | 1.60e-163 | 479 |
| Msa0792890 | MtrunA17_Chr8g0375321 | 42.355 | 569 | 322 | 4 | 19 | 586 | 14 | 577 | 6.92e-163 | 478 |
| Msa0792890 | MtrunA17_Chr8g0375331 | 41.975 | 567 | 323 | 4 | 21 | 586 | 3 | 564 | 2.13e-159 | 468 |
| Msa0792890 | MtrunA17_Chr4g0005901 | 42.179 | 569 | 318 | 6 | 28 | 594 | 18 | 577 | 2.64e-159 | 468 |
| Msa0792890 | MtrunA17_Chr8g0375361 | 42.504 | 567 | 320 | 4 | 21 | 586 | 18 | 579 | 9.90e-148 | 439 |
| Msa0792890 | MtrunA17_Chr7g0261811 | 38.664 | 569 | 335 | 6 | 21 | 585 | 6 | 564 | 2.84e-143 | 428 |
| Msa0792890 | MtrunA17_Chr7g0261771 | 36.979 | 576 | 345 | 6 | 16 | 585 | 5 | 568 | 2.90e-141 | 423 |
| Msa0792890 | MtrunA17_Chr3g0142101 | 37.774 | 593 | 337 | 10 | 12 | 599 | 8 | 573 | 1.26e-139 | 418 |
| Msa0792890 | MtrunA17_Chr1g0187241 | 36.637 | 565 | 344 | 5 | 25 | 585 | 9 | 563 | 6.23e-139 | 417 |
| Msa0792890 | MtrunA17_Chr7g0261881 | 35.677 | 569 | 352 | 5 | 21 | 585 | 6 | 564 | 1.77e-137 | 413 |
| Msa0792890 | MtrunA17_Chr1g0166791 | 35.929 | 565 | 352 | 4 | 23 | 585 | 5 | 561 | 5.25e-134 | 404 |
| Msa0792890 | MtrunA17_Chr7g0261791 | 37.390 | 567 | 338 | 7 | 25 | 585 | 12 | 567 | 2.11e-131 | 397 |
| Msa0792890 | MtrunA17_Chr3g0142091 | 37.303 | 571 | 335 | 7 | 21 | 586 | 5 | 557 | 2.92e-131 | 396 |
| Msa0792890 | MtrunA17_Chr3g0112671 | 36.598 | 582 | 346 | 9 | 11 | 589 | 2 | 563 | 6.03e-131 | 395 |
| Msa0792890 | MtrunA17_Chr5g0399061 | 37.797 | 590 | 351 | 10 | 16 | 597 | 2 | 583 | 2.26e-130 | 394 |
| Msa0792890 | MtrunA17_Chr1g0166711 | 35.763 | 590 | 360 | 6 | 26 | 605 | 9 | 589 | 3.44e-129 | 392 |
| Msa0792890 | MtrunA17_Chr7g0261851 | 38.328 | 574 | 340 | 5 | 16 | 585 | 2 | 565 | 5.80e-128 | 389 |
| Msa0792890 | MtrunA17_Chr5g0399071 | 37.197 | 578 | 352 | 6 | 28 | 599 | 11 | 583 | 3.45e-127 | 386 |
| Msa0792890 | MtrunA17_Chr1g0166741 | 35.169 | 563 | 350 | 4 | 26 | 587 | 11 | 559 | 5.06e-126 | 383 |
| Msa0792890 | MtrunA17_Chr4g0063591 | 39.362 | 564 | 323 | 8 | 28 | 586 | 8 | 557 | 1.04e-122 | 374 |
| Msa0792890 | MtrunA17_Chr7g0240381 | 35.140 | 572 | 350 | 9 | 21 | 589 | 8 | 561 | 1.17e-122 | 374 |
| Msa0792890 | MtrunA17_Chr4g0008651 | 34.583 | 587 | 366 | 10 | 6 | 589 | 1 | 572 | 7.24e-122 | 373 |
| Msa0792890 | MtrunA17_Chr5g0422881 | 36.491 | 570 | 350 | 8 | 42 | 605 | 20 | 583 | 3.45e-121 | 371 |
| Msa0792890 | MtrunA17_Chr4g0056431 | 36.581 | 585 | 359 | 10 | 23 | 599 | 6 | 586 | 1.48e-120 | 369 |
| Msa0792890 | MtrunA17_Chr3g0112611 | 34.021 | 582 | 367 | 9 | 13 | 589 | 3 | 572 | 1.65e-119 | 367 |
| Msa0792890 | MtrunA17_Chr3g0114501 | 34.542 | 579 | 358 | 10 | 25 | 596 | 5 | 569 | 2.32e-116 | 358 |
| Msa0792890 | MtrunA17_Chr1g0166771 | 36.149 | 509 | 310 | 4 | 63 | 570 | 12 | 506 | 3.04e-116 | 357 |
| Msa0792890 | MtrunA17_Chr4g0059991 | 33.793 | 580 | 365 | 6 | 15 | 586 | 3 | 571 | 5.90e-116 | 358 |
| Msa0792890 | MtrunA17_Chr3g0077151 | 37.500 | 576 | 311 | 11 | 19 | 585 | 5 | 540 | 7.75e-115 | 353 |
| Msa0792890 | MtrunA17_Chr4g0014871 | 35.000 | 580 | 336 | 11 | 16 | 585 | 2 | 550 | 4.51e-113 | 349 |
| Msa0792890 | MtrunA17_Chr4g0014791 | 34.957 | 575 | 338 | 9 | 16 | 585 | 3 | 546 | 4.62e-111 | 343 |
| Msa0792890 | MtrunA17_Chr4g0014841 | 35.652 | 575 | 334 | 9 | 16 | 585 | 3 | 546 | 7.02e-111 | 343 |
| Msa0792890 | MtrunA17_Chr4g0059981 | 32.508 | 606 | 387 | 10 | 12 | 602 | 4 | 602 | 1.33e-110 | 344 |
| Msa0792890 | MtrunA17_Chr4g0059971 | 32.765 | 586 | 378 | 9 | 11 | 586 | 3 | 582 | 1.34e-110 | 343 |
| Msa0792890 | MtrunA17_Chr4g0014801 | 35.529 | 577 | 335 | 11 | 16 | 585 | 2 | 548 | 4.58e-109 | 338 |
| Msa0792890 | MtrunA17_Chr5g0415791 | 34.342 | 562 | 354 | 9 | 42 | 593 | 29 | 585 | 4.86e-109 | 340 |
| Msa0792890 | MtrunA17_Chr5g0439381 | 35.971 | 556 | 332 | 6 | 30 | 582 | 16 | 550 | 3.26e-108 | 337 |
| Msa0792890 | MtrunA17_Chr7g0255621 | 32.470 | 579 | 381 | 8 | 25 | 599 | 3 | 575 | 1.65e-107 | 336 |
| Msa0792890 | MtrunA17_Chr7g0255601 | 33.276 | 577 | 373 | 8 | 29 | 598 | 14 | 585 | 4.19e-107 | 335 |
| Msa0792890 | MtrunA17_Chr8g0362781 | 31.295 | 556 | 373 | 4 | 38 | 586 | 26 | 579 | 5.45e-105 | 329 |
| Msa0792890 | MtrunA17_Chr4g0014781 | 34.375 | 576 | 342 | 9 | 16 | 585 | 3 | 548 | 1.62e-103 | 324 |
| Msa0792890 | MtrunA17_Chr7g0261661 | 37.856 | 457 | 270 | 5 | 133 | 585 | 4 | 450 | 4.98e-103 | 321 |
| Msa0792890 | MtrunA17_Chr7g0214731 | 33.813 | 556 | 349 | 8 | 43 | 586 | 62 | 610 | 6.10e-103 | 325 |
| Msa0792890 | MtrunA17_Chr2g0276751 | 33.922 | 566 | 347 | 8 | 23 | 585 | 19 | 560 | 1.15e-102 | 323 |
| Msa0792890 | MtrunA17_Chr7g0261751 | 35.270 | 482 | 281 | 6 | 16 | 467 | 5 | 485 | 4.84e-102 | 319 |
| Msa0792890 | MtrunA17_Chr2g0284701 | 31.864 | 590 | 389 | 8 | 16 | 593 | 5 | 593 | 8.96e-102 | 321 |
| Msa0792890 | MtrunA17_Chr7g0255611 | 30.862 | 580 | 392 | 7 | 24 | 599 | 11 | 585 | 4.74e-101 | 319 |
| Msa0792890 | MtrunA17_Chr1g0193391 | 32.264 | 592 | 358 | 11 | 30 | 599 | 3 | 573 | 2.13e-100 | 317 |
| Msa0792890 | MtrunA17_Chr8g0353031 | 32.628 | 567 | 348 | 9 | 43 | 599 | 19 | 561 | 2.64e-100 | 316 |
| Msa0792890 | MtrunA17_Chr1g0166731 | 36.601 | 459 | 280 | 4 | 129 | 585 | 9 | 458 | 6.01e-97 | 304 |
| Msa0792890 | MtrunA17_Chr8g0362711 | 32.635 | 573 | 353 | 7 | 31 | 586 | 13 | 569 | 1.14e-95 | 304 |
| Msa0792890 | MtrunA17_Chr7g0271221 | 31.463 | 588 | 366 | 10 | 21 | 604 | 4 | 558 | 5.64e-95 | 303 |
| Msa0792890 | MtrunA17_Chr5g0415961 | 31.218 | 583 | 370 | 9 | 21 | 586 | 2 | 570 | 2.40e-93 | 298 |
| Msa0792890 | MtrunA17_Chr4g0069581 | 34.528 | 530 | 326 | 9 | 60 | 586 | 4 | 515 | 5.11e-93 | 297 |
| Msa0792890 | MtrunA17_Chr3g0133341 | 29.840 | 563 | 373 | 7 | 38 | 594 | 10 | 556 | 3.75e-92 | 295 |
| Msa0792890 | MtrunA17_Chr8g0379971 | 32.060 | 602 | 380 | 9 | 24 | 598 | 2 | 601 | 1.65e-91 | 294 |
| Msa0792890 | MtrunA17_Chr7g0261731 | 38.244 | 353 | 207 | 2 | 16 | 366 | 5 | 348 | 8.36e-91 | 284 |
| Msa0792890 | MtrunA17_Chr4g0060001 | 30.756 | 569 | 380 | 8 | 16 | 578 | 2 | 562 | 2.62e-90 | 291 |
| Msa0792890 | MtrunA17_Chr7g0240271 | 28.814 | 590 | 405 | 8 | 15 | 599 | 2 | 581 | 1.08e-88 | 286 |
| Msa0792890 | MtrunA17_Chr1g0157601 | 30.855 | 538 | 355 | 9 | 54 | 585 | 27 | 553 | 3.29e-86 | 279 |
| Msa0792890 | MtrunA17_Chr8g0390331 | 29.837 | 553 | 375 | 7 | 41 | 589 | 14 | 557 | 5.61e-86 | 279 |
| Msa0792890 | MtrunA17_Chr4g0014861 | 35.581 | 430 | 255 | 7 | 161 | 585 | 13 | 425 | 6.28e-86 | 274 |
| Msa0792890 | MtrunA17_Chr8g0362801 | 32.974 | 464 | 299 | 9 | 130 | 586 | 1 | 459 | 1.32e-83 | 270 |
| Msa0792890 | MtrunA17_Chr3g0082631 | 34.763 | 443 | 270 | 8 | 164 | 593 | 30 | 466 | 1.36e-83 | 270 |
| Msa0792890 | MtrunA17_Chr1g0157611 | 30.442 | 565 | 376 | 8 | 41 | 599 | 15 | 568 | 4.86e-82 | 268 |
| Msa0792890 | MtrunA17_Chr2g0331511 | 28.623 | 552 | 380 | 9 | 54 | 598 | 33 | 577 | 4.65e-80 | 265 |
| Msa0792890 | MtrunA17_Chr1g0177591 | 29.210 | 582 | 376 | 13 | 14 | 585 | 9 | 564 | 1.94e-79 | 261 |
| Msa0792890 | MtrunA17_Chr1g0157621 | 29.128 | 539 | 367 | 7 | 63 | 599 | 1 | 526 | 1.88e-78 | 258 |
| Msa0792890 | MtrunA17_Chr5g0415841 | 30.388 | 464 | 309 | 7 | 130 | 586 | 1 | 457 | 4.93e-78 | 254 |
| Msa0792890 | MtrunA17_Chr1g0147631 | 28.715 | 599 | 398 | 14 | 16 | 601 | 2 | 584 | 1.26e-77 | 257 |
| Msa0792890 | MtrunA17_Chr4g0003761 | 28.188 | 596 | 408 | 12 | 10 | 599 | 2 | 583 | 1.45e-77 | 257 |
| Msa0792890 | MtrunA17_Chr7g0235521 | 30.303 | 462 | 312 | 7 | 142 | 598 | 13 | 469 | 1.40e-76 | 251 |
| Msa0792890 | MtrunA17_Chr7g0240281 | 28.214 | 599 | 410 | 10 | 16 | 604 | 3 | 591 | 2.75e-76 | 254 |
| Msa0792890 | MtrunA17_Chr7g0240131 | 30.087 | 462 | 313 | 7 | 142 | 598 | 13 | 469 | 3.02e-75 | 248 |
| Msa0792890 | MtrunA17_Chr8g0379991 | 31.779 | 579 | 350 | 11 | 60 | 598 | 1 | 574 | 5.21e-75 | 250 |
| Msa0792890 | MtrunA17_Chr2g0331481 | 27.978 | 554 | 386 | 8 | 54 | 602 | 37 | 582 | 1.60e-74 | 250 |
| Msa0792890 | MtrunA17_Chr7g0240181 | 29.870 | 462 | 314 | 7 | 142 | 598 | 13 | 469 | 3.21e-74 | 245 |
| Msa0792890 | MtrunA17_Chr7g0240211 | 29.870 | 462 | 314 | 7 | 142 | 598 | 13 | 469 | 3.64e-74 | 245 |
| Msa0792890 | MtrunA17_Chr2g0331521 | 26.773 | 564 | 398 | 9 | 42 | 599 | 22 | 576 | 1.96e-72 | 243 |
| Msa0792890 | MtrunA17_Chr2g0331471 | 27.428 | 587 | 409 | 9 | 25 | 602 | 67 | 645 | 2.02e-72 | 246 |
| Msa0792890 | MtrunA17_Chr2g0325951 | 30.212 | 566 | 366 | 11 | 29 | 586 | 1 | 545 | 3.25e-71 | 239 |
| Msa0792890 | MtrunA17_Chr1g0177611 | 31.556 | 450 | 280 | 11 | 141 | 585 | 9 | 435 | 9.14e-71 | 235 |
| Msa0792890 | MtrunA17_Chr6g0451841 | 29.130 | 563 | 343 | 11 | 44 | 585 | 6 | 533 | 1.10e-70 | 237 |
| Msa0792890 | MtrunA17_Chr2g0325961 | 30.159 | 567 | 366 | 10 | 29 | 586 | 1 | 546 | 2.22e-69 | 234 |
| Msa0792890 | MtrunA17_Chr7g0240151 | 29.004 | 462 | 300 | 8 | 142 | 598 | 13 | 451 | 9.24e-68 | 228 |
| Msa0792890 | MtrunA17_Chr2g0326211 | 29.145 | 573 | 363 | 11 | 29 | 586 | 1 | 545 | 1.11e-67 | 229 |
| Msa0792890 | MtrunA17_Chr2g0331461 | 29.084 | 557 | 377 | 8 | 54 | 602 | 37 | 583 | 9.94e-66 | 226 |
| Msa0792890 | MtrunA17_Chr3g0142111 | 36.538 | 312 | 189 | 3 | 16 | 323 | 20 | 326 | 1.36e-65 | 218 |
| Msa0792890 | MtrunA17_Chr1g0177631 | 30.512 | 449 | 286 | 11 | 141 | 585 | 9 | 435 | 2.82e-65 | 220 |
| Msa0792890 | MtrunA17_Chr3g0112631 | 36.201 | 279 | 167 | 6 | 316 | 589 | 3 | 275 | 2.54e-59 | 200 |
| Msa0792890 | MtrunA17_Chr3g0142121 | 36.972 | 284 | 159 | 6 | 317 | 599 | 11 | 275 | 3.40e-57 | 194 |
| Msa0792890 | MtrunA17_Chr7g0234381 | 31.787 | 431 | 259 | 9 | 156 | 585 | 22 | 418 | 1.41e-50 | 180 |
| Msa0792890 | MtrunA17_Chr7g0234151 | 31.494 | 435 | 255 | 10 | 156 | 585 | 22 | 418 | 1.99e-50 | 180 |
| Msa0792890 | MtrunA17_Chr4g0060071 | 31.379 | 290 | 183 | 6 | 299 | 586 | 21 | 296 | 9.08e-45 | 161 |
| Msa0792890 | MtrunA17_Chr7g0234181 | 29.698 | 431 | 268 | 10 | 156 | 585 | 17 | 413 | 2.53e-44 | 163 |
| Msa0792890 | MtrunA17_Chr7g0261721 | 35.354 | 198 | 122 | 3 | 391 | 585 | 4 | 198 | 1.27e-34 | 131 |
| Msa0792890 | MtrunA17_Chr3g0112651 | 34.921 | 189 | 117 | 3 | 129 | 317 | 21 | 203 | 1.46e-31 | 122 |
| Msa0792890 | MtrunA17_Chr1g0147591 | 28.351 | 194 | 130 | 3 | 171 | 361 | 9 | 196 | 1.07e-29 | 116 |
| Msa0792890 | MtrunA17_Chr7g0261671 | 40.541 | 111 | 66 | 0 | 16 | 126 | 6 | 116 | 9.06e-25 | 99.8 |
| Msa0792890 | MtrunA17_Chr7g0261831 | 33.544 | 158 | 94 | 4 | 273 | 428 | 3 | 151 | 2.09e-21 | 93.2 |
| Msa0792890 | MtrunA17_Chr4g0014851 | 41.000 | 100 | 59 | 0 | 29 | 128 | 17 | 116 | 3.31e-20 | 88.2 |
| Msa0792890 | MtrunA17_Chr2g0326221 | 29.515 | 227 | 130 | 6 | 361 | 586 | 24 | 221 | 8.56e-20 | 88.6 |
| Msa0792890 | MtrunA17_Chr1g0166721 | 33.654 | 104 | 69 | 0 | 25 | 128 | 8 | 111 | 2.79e-19 | 84.7 |
| Msa0792890 | MtrunA17_Chr4g0060061 | 33.600 | 125 | 78 | 1 | 150 | 274 | 9 | 128 | 2.83e-18 | 81.6 |
| Msa0792890 | MtrunA17_Chr3g0112661 | 41.379 | 87 | 51 | 0 | 30 | 116 | 19 | 105 | 5.63e-17 | 77.8 |
| Msa0792890 | MtrunA17_Chr3g0082621 | 41.538 | 65 | 38 | 0 | 64 | 128 | 8 | 72 | 1.35e-12 | 63.9 |
| Msa0792890 | MtrunA17_Chr8g0382591 | 32.710 | 107 | 70 | 2 | 316 | 420 | 3 | 109 | 1.53e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0792890 | AT1G32450.1 | 73.710 | 601 | 148 | 3 | 1 | 598 | 1 | 594 | 0.0 | 924 |
| Msa0792890 | AT4G21680.1 | 68.366 | 569 | 173 | 4 | 25 | 589 | 9 | 574 | 0.0 | 793 |
| Msa0792890 | AT5G19640.1 | 56.610 | 590 | 235 | 5 | 16 | 604 | 31 | 600 | 0.0 | 670 |
| Msa0792890 | AT3G54140.1 | 43.717 | 565 | 311 | 5 | 23 | 586 | 3 | 561 | 2.19e-172 | 502 |
| Msa0792890 | AT3G54140.2 | 43.717 | 565 | 311 | 5 | 23 | 586 | 3 | 561 | 2.19e-172 | 502 |
| Msa0792890 | AT2G02040.1 | 43.548 | 558 | 309 | 4 | 30 | 586 | 27 | 579 | 1.08e-168 | 493 |
| Msa0792890 | AT1G62200.1 | 42.123 | 584 | 325 | 7 | 6 | 586 | 13 | 586 | 2.67e-164 | 482 |
| Msa0792890 | AT1G62200.2 | 40.131 | 613 | 325 | 8 | 6 | 586 | 13 | 615 | 1.11e-157 | 466 |
| Msa0792890 | AT1G62200.3 | 40.131 | 613 | 325 | 8 | 6 | 586 | 27 | 629 | 1.75e-157 | 466 |
| Msa0792890 | AT5G01180.2 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0792890 | AT5G01180.3 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0792890 | AT5G01180.1 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0792890 | AT2G02020.1 | 38.869 | 566 | 299 | 7 | 16 | 579 | 14 | 534 | 4.16e-139 | 416 |
| Msa0792890 | AT2G26690.1 | 36.897 | 580 | 351 | 7 | 28 | 605 | 8 | 574 | 1.47e-125 | 382 |
| Msa0792890 | AT5G46050.1 | 35.501 | 569 | 352 | 7 | 21 | 585 | 4 | 561 | 6.02e-125 | 380 |
| Msa0792890 | AT5G46040.1 | 35.026 | 571 | 354 | 9 | 21 | 586 | 4 | 562 | 1.06e-122 | 375 |
| Msa0792890 | AT3G54450.1 | 35.915 | 568 | 331 | 10 | 42 | 599 | 11 | 555 | 8.16e-121 | 369 |
| Msa0792890 | AT1G12110.1 | 37.119 | 590 | 351 | 10 | 21 | 600 | 5 | 584 | 5.01e-120 | 368 |
| Msa0792890 | AT3G53960.1 | 34.256 | 578 | 366 | 9 | 16 | 589 | 9 | 576 | 2.20e-117 | 362 |
| Msa0792890 | AT2G02020.2 | 35.866 | 566 | 295 | 9 | 16 | 579 | 14 | 513 | 5.99e-117 | 358 |
| Msa0792890 | AT2G37900.1 | 33.333 | 573 | 364 | 7 | 19 | 589 | 13 | 569 | 6.04e-117 | 360 |
| Msa0792890 | AT2G26690.2 | 36.727 | 550 | 333 | 7 | 58 | 605 | 5 | 541 | 3.29e-116 | 357 |
| Msa0792890 | AT2G26690.3 | 37.153 | 541 | 325 | 7 | 67 | 605 | 2 | 529 | 4.58e-116 | 356 |
| Msa0792890 | AT2G40460.1 | 35.626 | 567 | 340 | 10 | 28 | 587 | 8 | 556 | 1.08e-112 | 349 |
| Msa0792890 | AT1G69870.1 | 33.157 | 567 | 367 | 8 | 41 | 599 | 48 | 610 | 1.90e-112 | 350 |
| Msa0792890 | AT5G13400.1 | 34.043 | 564 | 356 | 7 | 33 | 586 | 52 | 609 | 1.19e-108 | 340 |
| Msa0792890 | AT1G59740.1 | 34.775 | 601 | 361 | 12 | 7 | 597 | 3 | 582 | 2.06e-108 | 338 |
| Msa0792890 | AT1G68570.1 | 34.790 | 595 | 364 | 13 | 15 | 600 | 2 | 581 | 2.37e-107 | 335 |
| Msa0792890 | AT1G68570.2 | 35.443 | 553 | 341 | 10 | 57 | 600 | 6 | 551 | 2.14e-105 | 330 |
| Msa0792890 | AT1G72140.1 | 34.159 | 565 | 324 | 8 | 32 | 585 | 22 | 549 | 3.45e-103 | 323 |
| Msa0792890 | AT1G33440.1 | 36.077 | 571 | 335 | 10 | 24 | 585 | 18 | 567 | 8.12e-102 | 321 |
| Msa0792890 | AT1G18880.1 | 32.264 | 561 | 365 | 9 | 48 | 599 | 23 | 577 | 1.18e-100 | 318 |
| Msa0792890 | AT1G72125.1 | 33.913 | 575 | 349 | 9 | 18 | 585 | 3 | 553 | 1.28e-100 | 317 |
| Msa0792890 | AT1G27080.1 | 33.512 | 561 | 353 | 10 | 44 | 599 | 14 | 559 | 1.33e-100 | 317 |
| Msa0792890 | AT2G37900.2 | 33.267 | 505 | 319 | 7 | 87 | 589 | 2 | 490 | 4.93e-100 | 313 |
| Msa0792890 | AT3G21670.1 | 34.286 | 560 | 342 | 7 | 30 | 582 | 12 | 552 | 7.34e-100 | 316 |
| Msa0792890 | AT1G22540.1 | 32.979 | 564 | 346 | 8 | 32 | 590 | 18 | 554 | 2.11e-97 | 308 |
| Msa0792890 | AT5G46050.2 | 36.304 | 460 | 278 | 7 | 130 | 585 | 1 | 449 | 4.08e-97 | 305 |
| Msa0792890 | AT1G72120.1 | 33.043 | 575 | 350 | 9 | 18 | 585 | 3 | 549 | 1.99e-96 | 306 |
| Msa0792890 | AT1G72130.1 | 34.909 | 550 | 304 | 9 | 45 | 585 | 26 | 530 | 3.11e-96 | 305 |
| Msa0792890 | AT5G62680.1 | 32.182 | 550 | 356 | 9 | 48 | 586 | 47 | 590 | 6.03e-96 | 306 |
| Msa0792890 | AT3G47960.1 | 31.145 | 594 | 375 | 11 | 4 | 586 | 36 | 606 | 3.72e-95 | 305 |
| Msa0792890 | AT1G27080.2 | 33.083 | 532 | 336 | 10 | 73 | 599 | 1 | 517 | 1.83e-93 | 298 |
| Msa0792890 | AT1G22550.1 | 32.702 | 581 | 348 | 10 | 19 | 585 | 5 | 556 | 1.17e-90 | 291 |
| Msa0792890 | AT1G22570.1 | 33.214 | 557 | 340 | 10 | 19 | 566 | 5 | 538 | 1.05e-89 | 288 |
| Msa0792890 | AT1G69850.1 | 30.324 | 587 | 391 | 8 | 21 | 593 | 2 | 584 | 4.78e-87 | 282 |
| Msa0792890 | AT5G62730.1 | 30.835 | 587 | 356 | 12 | 17 | 585 | 28 | 582 | 5.86e-87 | 282 |
| Msa0792890 | AT1G22570.2 | 33.984 | 512 | 306 | 10 | 64 | 566 | 13 | 501 | 2.16e-84 | 273 |
| Msa0792890 | AT1G27040.1 | 29.381 | 565 | 383 | 6 | 30 | 591 | 13 | 564 | 5.68e-83 | 271 |
| Msa0792890 | AT1G27040.2 | 29.381 | 565 | 383 | 6 | 30 | 591 | 9 | 560 | 7.13e-83 | 271 |
| Msa0792890 | AT1G52190.1 | 28.419 | 563 | 376 | 10 | 41 | 585 | 13 | 566 | 2.67e-81 | 268 |
| Msa0792890 | AT5G62730.2 | 30.741 | 553 | 334 | 11 | 50 | 585 | 3 | 523 | 6.53e-81 | 265 |
| Msa0792890 | AT3G45720.1 | 28.731 | 536 | 355 | 7 | 66 | 598 | 41 | 552 | 1.83e-80 | 264 |
| Msa0792890 | AT3G16180.1 | 29.451 | 601 | 391 | 14 | 16 | 599 | 2 | 586 | 6.69e-80 | 263 |
| Msa0792890 | AT3G45650.1 | 29.138 | 580 | 376 | 11 | 24 | 599 | 2 | 550 | 2.83e-79 | 261 |
| Msa0792890 | AT3G45680.1 | 28.897 | 571 | 378 | 9 | 30 | 598 | 8 | 552 | 5.10e-79 | 260 |
| Msa0792890 | AT3G45710.1 | 29.264 | 557 | 369 | 7 | 44 | 598 | 21 | 554 | 9.74e-79 | 259 |
| Msa0792890 | AT1G27040.3 | 29.609 | 537 | 362 | 6 | 58 | 591 | 9 | 532 | 5.59e-78 | 257 |
| Msa0792890 | AT5G14940.1 | 29.359 | 562 | 329 | 15 | 64 | 599 | 27 | 546 | 1.23e-76 | 254 |
| Msa0792890 | AT1G72130.2 | 34.234 | 444 | 248 | 7 | 151 | 585 | 4 | 412 | 5.06e-75 | 246 |
| Msa0792890 | AT1G72130.3 | 34.234 | 444 | 248 | 7 | 151 | 585 | 4 | 412 | 5.06e-75 | 246 |
| Msa0792890 | AT3G45660.1 | 29.020 | 541 | 353 | 10 | 62 | 598 | 39 | 552 | 8.29e-75 | 249 |
| Msa0792890 | AT3G45660.3 | 29.020 | 541 | 353 | 10 | 62 | 598 | 39 | 552 | 8.29e-75 | 249 |
| Msa0792890 | AT3G45650.2 | 28.053 | 606 | 375 | 12 | 24 | 599 | 2 | 576 | 1.23e-74 | 249 |
| Msa0792890 | AT3G45660.2 | 29.020 | 541 | 353 | 10 | 62 | 598 | 60 | 573 | 1.31e-74 | 249 |
| Msa0792890 | AT5G28470.2 | 27.687 | 549 | 388 | 5 | 41 | 587 | 14 | 555 | 1.99e-74 | 248 |
| Msa0792890 | AT1G69860.1 | 30.459 | 545 | 354 | 11 | 48 | 586 | 22 | 547 | 5.08e-74 | 247 |
| Msa0792890 | AT3G45700.1 | 27.599 | 558 | 372 | 8 | 43 | 598 | 15 | 542 | 4.62e-72 | 241 |
| Msa0792890 | AT5G28470.1 | 27.505 | 549 | 387 | 6 | 41 | 587 | 14 | 553 | 1.49e-71 | 241 |
| Msa0792890 | AT3G25260.1 | 27.828 | 557 | 345 | 11 | 34 | 585 | 11 | 515 | 7.46e-67 | 227 |
| Msa0792890 | AT3G01350.1 | 27.778 | 558 | 354 | 12 | 64 | 596 | 27 | 560 | 3.07e-65 | 224 |
| Msa0792890 | AT3G45690.1 | 26.297 | 559 | 347 | 10 | 43 | 600 | 17 | 511 | 2.91e-63 | 217 |
| Msa0792890 | AT3G25280.1 | 26.655 | 574 | 362 | 14 | 17 | 585 | 2 | 521 | 7.03e-57 | 200 |
| Msa0792890 | AT2G38100.1 | 23.993 | 546 | 368 | 16 | 62 | 599 | 9 | 515 | 1.57e-33 | 135 |
| Msa0792890 | AT2G38100.3 | 23.993 | 546 | 368 | 16 | 62 | 599 | 15 | 521 | 1.74e-33 | 135 |
| Msa0792890 | AT2G38100.2 | 23.881 | 536 | 362 | 15 | 72 | 599 | 2 | 499 | 1.80e-33 | 134 |
| Msa0792890 | AT5G11570.1 | 30.000 | 250 | 163 | 5 | 338 | 585 | 237 | 476 | 1.41e-29 | 122 |
| Msa0792890 | AT5G11570.1 | 30.093 | 216 | 144 | 4 | 54 | 266 | 23 | 234 | 3.08e-22 | 100 |
Find 161 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGAACAGGCGCCTTTC+TGG | 0.168501 | 5_3:+4696155 | None:intergenic |
| TAAAACATGTGCTGTCTTTC+AGG | 0.175129 | 5_3:-4697115 | Msa0792890:CDS |
| CTTTCCTAAGTGACTCTTAT+TGG | 0.215786 | 5_3:-4697146 | Msa0792890:CDS |
| ACTTCTTCAACTTGACTTAC+AGG | 0.233280 | 5_3:+4696118 | None:intergenic |
| TACTGAGACTCCTTCCAATT+TGG | 0.238205 | 5_3:-4696087 | Msa0792890:CDS |
| CTGGACTAGTTGAATGTTAT+AGG | 0.257127 | 5_3:-4695790 | Msa0792890:CDS |
| GAATGTGGGCTCTTGGCTTC+TGG | 0.265662 | 5_3:-4696665 | Msa0792890:CDS |
| TTTCCTAAGTGACTCTTATT+GGG | 0.274400 | 5_3:-4697145 | Msa0792890:CDS |
| AGCTGACCATCTTCCAGATT+TGG | 0.275707 | 5_3:+4700357 | None:intergenic |
| CCAGATTTGGCTCTTATTGC+AGG | 0.276985 | 5_3:+4700370 | None:intergenic |
| TGACCTTTATTGAGGTTTAC+TGG | 0.278086 | 5_3:+4695494 | None:intergenic |
| ATCCCTCAGTATGCACTTAT+AGG | 0.280570 | 5_3:-4695701 | Msa0792890:CDS |
| CTTTGCAGTGGCGGCAGTCT+TGG | 0.311213 | 5_3:+4695753 | None:intergenic |
| GATTCATTCCCACAACCTTT+AGG | 0.315220 | 5_3:+4696927 | None:intergenic |
| TCTACCTAGCTTTGAACTTT+GGG | 0.317823 | 5_3:-4696731 | Msa0792890:CDS |
| CGAGTACTTTGAGCATCTTC+TGG | 0.327628 | 5_3:-4695727 | Msa0792890:CDS |
| CCACTTTGCACATGCAATAT+AGG | 0.335349 | 5_3:+4695418 | None:intergenic |
| TTCTACCTAGCTTTGAACTT+TGG | 0.355047 | 5_3:-4696732 | Msa0792890:CDS |
| GAAAACCACCGAGTATATTA+TGG | 0.363778 | 5_3:+4696057 | None:intergenic |
| CTTGGCTTCTGGCTGTCTGC+AGG | 0.364129 | 5_3:-4696654 | Msa0792890:CDS |
| CAACCGAATATTGCCACATT+CGG | 0.367343 | 5_3:-4696819 | Msa0792890:CDS |
| CAACTATGTAAGTAGCTTAC+TGG | 0.367530 | 5_3:-4695567 | Msa0792890:CDS |
| TCAATAAAGGTCACCTAGAT+AGG | 0.368292 | 5_3:-4695484 | Msa0792890:CDS |
| AAACAATATCAGTGCGATAA+AGG | 0.368557 | 5_3:+4696626 | None:intergenic |
| TCAGAAGAATTGACTCTAGA+TGG | 0.370202 | 5_3:-4700415 | Msa0792890:CDS |
| TCGATCTATCTCATTGCCTT+GGG | 0.371691 | 5_3:-4696855 | Msa0792890:CDS |
| GCACTGATATTGTTTCTTGT+TGG | 0.378724 | 5_3:-4696618 | Msa0792890:CDS |
| ATTATGGTGCAGAGCCAAAT+TGG | 0.381296 | 5_3:+4696073 | None:intergenic |
| TTTGTTGTGATGAAGGTTCT+TGG | 0.383790 | 5_3:-4696215 | Msa0792890:intron |
| AACCGAATATTGCCACATTC+GGG | 0.389216 | 5_3:-4696818 | Msa0792890:CDS |
| TTGATTAAACCTAAAGGTTG+TGG | 0.389825 | 5_3:-4696936 | Msa0792890:CDS |
| TACATAGTTGCCGAGGGAAA+TGG | 0.392484 | 5_3:+4695580 | None:intergenic |
| GCCCCGAATGTGGCAATATT+CGG | 0.395016 | 5_3:+4696816 | None:intergenic |
| TACAAGTCATCTCCATTTGA+TGG | 0.396660 | 5_3:+4696498 | None:intergenic |
| CCAGATGGCTTAAAGAGTTT+CGG | 0.398986 | 5_3:-4695623 | Msa0792890:CDS |
| CCGAAACTCTTTAAGCCATC+TGG | 0.412448 | 5_3:+4695623 | None:intergenic |
| CTCGATCTATCTCATTGCCT+TGG | 0.417455 | 5_3:-4696856 | Msa0792890:CDS |
| GATGGAAGTGTTGATTTCAA+TGG | 0.424543 | 5_3:-4700397 | Msa0792890:CDS |
| TGATTAAACCTAAAGGTTGT+GGG | 0.432667 | 5_3:-4696935 | Msa0792890:CDS |
| CCATTTGCTCACATTGTTAG+CGG | 0.435931 | 5_3:+4697203 | None:intergenic |
| TTTGTCCTACCACCCTTGTC+AGG | 0.440304 | 5_3:+4697238 | None:intergenic |
| AAAGTTGAAATGCCATCAAA+TGG | 0.443101 | 5_3:-4696510 | Msa0792890:CDS |
| CCTGCAATAAGAGCCAAATC+TGG | 0.443888 | 5_3:-4700370 | Msa0792890:CDS |
| GAGACGCCATGGGTTGGAAC+AGG | 0.445766 | 5_3:+4696144 | None:intergenic |
| CACCATTCTCGTCTATTTCG+AGG | 0.447297 | 5_3:-4696694 | Msa0792890:CDS |
| AGAGGAAGTAAAACCTATCT+AGG | 0.447626 | 5_3:+4695471 | None:intergenic |
| CTCTTCTTGATTAAACCTAA+AGG | 0.452670 | 5_3:-4696942 | Msa0792890:CDS |
| TTGATGCAGCAACAAGGACT+TGG | 0.457746 | 5_3:+4696541 | None:intergenic |
| CTCGTCTATTTCGAGGATGA+AGG | 0.458526 | 5_3:-4696687 | Msa0792890:CDS |
| TATCTCATTGCCTTGGGGAA+TGG | 0.461561 | 5_3:-4696849 | Msa0792890:CDS |
| ATGTGGAAAACATTCAAGTT+GGG | 0.461991 | 5_3:-4696898 | Msa0792890:CDS |
| CTGAGGTGTTTATGTATGTA+GGG | 0.463211 | 5_3:-4695673 | Msa0792890:CDS |
| GATGAAGGAATGTGGGCTCT+TGG | 0.464285 | 5_3:-4696672 | Msa0792890:CDS |
| GAACCAATGTCTGGCAACTC+TGG | 0.466451 | 5_3:-4697295 | Msa0792890:CDS |
| TCTACGGAGGATCACATGCC+GGG | 0.468350 | 5_3:-4695524 | Msa0792890:CDS |
| CCGCTAACAATGTGAGCAAA+TGG | 0.471071 | 5_3:-4697203 | Msa0792890:CDS |
| TCTGAGGTGTTTATGTATGT+AGG | 0.471453 | 5_3:-4695674 | Msa0792890:CDS |
| GTCCGACTCTAAGGGACTTA+CGG | 0.471843 | 5_3:-4695867 | Msa0792890:CDS |
| TCGAATTCTCGATCCATTTG+TGG | 0.474043 | 5_3:-4695903 | Msa0792890:CDS |
| CCTGGCAAGAGGGTTGCCAC+TGG | 0.476047 | 5_3:+4696569 | None:intergenic |
| AATGTGGAAAACATTCAAGT+TGG | 0.478518 | 5_3:-4696899 | Msa0792890:CDS |
| ACTTACGGAGCTTCAGAGAA+TGG | 0.483312 | 5_3:-4695852 | Msa0792890:CDS |
| TATCTAGGTGACCTTTATTG+AGG | 0.485934 | 5_3:+4695486 | None:intergenic |
| AAACATTCAAGTTGGGAGAT+GGG | 0.491686 | 5_3:-4696891 | Msa0792890:CDS |
| AGAGTTAGAAGTCTCTAAAG+AGG | 0.492373 | 5_3:-4700708 | Msa0792890:intron |
| CGAATTCTCGATCCATTTGT+GGG | 0.495488 | 5_3:-4695902 | Msa0792890:CDS |
| CCAGTGGCAACCCTCTTGCC+AGG | 0.497542 | 5_3:-4696569 | Msa0792890:CDS |
| AACAAGGACTTGGCAGAACC+TGG | 0.499858 | 5_3:+4696551 | None:intergenic |
| GTGGTACAAGAGTATACAGC+TGG | 0.502476 | 5_3:-4695399 | Msa0792890:CDS |
| AAAACATTCAAGTTGGGAGA+TGG | 0.502988 | 5_3:-4696892 | Msa0792890:CDS |
| GACCTTTATTGAGGTTTACT+GGG | 0.503932 | 5_3:+4695495 | None:intergenic |
| TGTTTACATCTTCTCTCTAG+TGG | 0.504895 | 5_3:-4697172 | Msa0792890:CDS |
| ATCCCAGTAAACCTCAATAA+AGG | 0.507470 | 5_3:-4695497 | Msa0792890:CDS |
| GTAATAGCAATGGTTTCAGC+TGG | 0.515102 | 5_3:-4695809 | Msa0792890:CDS |
| CAAGACTGCCGCCACTGCAA+AGG | 0.518476 | 5_3:-4695752 | Msa0792890:CDS |
| CTCATTGCCTTGGGGAATGG+AGG | 0.519787 | 5_3:-4696846 | Msa0792890:CDS |
| TGCATGACATCCATTTCCCT+CGG | 0.522165 | 5_3:-4695590 | Msa0792890:CDS |
| GAGGTACGATGACAAGGATA+AGG | 0.524291 | 5_3:+4696962 | None:intergenic |
| TCGATGTCAAGGCGGCTAAG+AGG | 0.525443 | 5_3:+4695453 | None:intergenic |
| CTGGCAAGAGGGTTGCCACT+GGG | 0.527982 | 5_3:+4696570 | None:intergenic |
| CTCTACGGAGGATCACATGC+CGG | 0.528318 | 5_3:-4695525 | Msa0792890:CDS |
| ATGCCAGAGTTGCCAGACAT+TGG | 0.529945 | 5_3:+4697292 | None:intergenic |
| GGCTTGAAATGTCGGTACTT+TGG | 0.530731 | 5_3:+4696591 | None:intergenic |
| TACTCGAGCCTTTGCAGTGG+CGG | 0.530816 | 5_3:+4695744 | None:intergenic |
| GTTGCCCAAAGTTCAAAGCT+AGG | 0.531984 | 5_3:+4696727 | None:intergenic |
| TGCCACTGGGCTTGAAATGT+CGG | 0.534487 | 5_3:+4696583 | None:intergenic |
| AACATTCAAGTTGGGAGATG+GGG | 0.535122 | 5_3:-4696890 | Msa0792890:CDS |
| CTTACGGAGCTTCAGAGAAT+GGG | 0.535433 | 5_3:-4695851 | Msa0792890:CDS |
| TTCAATGCTCAAACACCAGA+TGG | 0.538636 | 5_3:-4695638 | Msa0792890:CDS |
| AAATCTGGAAGATGGTCAGC+TGG | 0.539495 | 5_3:-4700355 | Msa0792890:CDS |
| AAGGCGCCTGTTCCAACCCA+TGG | 0.544927 | 5_3:-4696150 | Msa0792890:CDS |
| CTTAGCCGCCTTGACATCGA+TGG | 0.545584 | 5_3:-4695450 | Msa0792890:CDS |
| TTGATCAGTGAACCAATGTC+TGG | 0.547412 | 5_3:-4697304 | Msa0792890:intron |
| GTTTACATCTTCTCTCTAGT+GGG | 0.548661 | 5_3:-4697171 | Msa0792890:CDS |
| TGTTATAGCTGTAATAGCAA+TGG | 0.550110 | 5_3:-4695819 | Msa0792890:CDS |
| AAGTCCTTGTTGCTGCATCA+AGG | 0.550980 | 5_3:-4696539 | Msa0792890:CDS |
| CAAGAAGAGGTACGATGACA+AGG | 0.553042 | 5_3:+4696956 | None:intergenic |
| TCAAAGCAAGACATGCTAGC+TGG | 0.554527 | 5_3:+4695962 | None:intergenic |
| AATTAGACTTTGAAGCTACC+TGG | 0.558655 | 5_3:+4695350 | None:intergenic |
| CGCAAAGAGAATGATGAGCC+AGG | 0.562335 | 5_3:-4695368 | Msa0792890:CDS |
| TAGGTAGAAGTAGCTAAAGA+AGG | 0.563359 | 5_3:+4696746 | None:intergenic |
| TAAGAGCCAAATCTGGAAGA+TGG | 0.566680 | 5_3:-4700363 | Msa0792890:CDS |
| TTCCCCAATAAGAGTCACTT+AGG | 0.572082 | 5_3:+4697142 | None:intergenic |
| AGGACAGAGACGCCATGGGT+TGG | 0.573128 | 5_3:+4696138 | None:intergenic |
| ATCCTCGAAATAGACGAGAA+TGG | 0.573136 | 5_3:+4696692 | None:intergenic |
| CTTTCCTTGATGCAGCAACA+AGG | 0.573520 | 5_3:+4696535 | None:intergenic |
| CTTTAGGTTTAATCAAGAAG+AGG | 0.576154 | 5_3:+4696943 | None:intergenic |
| AACAATGTGAGCAAATGGAC+TGG | 0.581553 | 5_3:-4697198 | Msa0792890:CDS |
| GAGCTTCAGAGAATGGGAGT+TGG | 0.583029 | 5_3:-4695845 | Msa0792890:CDS |
| TTCCTAAGTGACTCTTATTG+GGG | 0.583654 | 5_3:-4697144 | Msa0792890:CDS |
| AATTAAGTCCATCGATGTCA+AGG | 0.584514 | 5_3:+4695442 | None:intergenic |
| CGAATGTGGCAATATTCGGT+TGG | 0.585478 | 5_3:+4696820 | None:intergenic |
| CGATCTATCTCATTGCCTTG+GGG | 0.585703 | 5_3:-4696854 | Msa0792890:CDS |
| AGCTACTTACATAGTTGCCG+AGG | 0.588531 | 5_3:+4695573 | None:intergenic |
| CTCCGTAAGTCCCTTAGAGT+CGG | 0.591568 | 5_3:+4695865 | None:intergenic |
| CTTGTATAACATGGATACAA+AGG | 0.592055 | 5_3:-4696481 | Msa0792890:CDS |
| GACGAGGAGCACTCGAAGGA+GGG | 0.592862 | 5_3:-4696783 | Msa0792890:CDS |
| ATTTCGAGGATGAAGGAATG+TGG | 0.593541 | 5_3:-4696680 | Msa0792890:CDS |
| AGAGATCAAGATAACCAGAA+AGG | 0.593846 | 5_3:-4696169 | Msa0792890:CDS |
| CTCCTATAAGTGCATACTGA+GGG | 0.598714 | 5_3:+4695699 | None:intergenic |
| AGGTTTACTGGGATCCACCC+CGG | 0.598989 | 5_3:+4695506 | None:intergenic |
| TGACGAGGAGCACTCGAAGG+AGG | 0.599052 | 5_3:-4696784 | Msa0792890:CDS |
| CTTACAGGACAGAGACGCCA+TGG | 0.599282 | 5_3:+4696133 | None:intergenic |
| CTTGGCAGAACCTGGCAAGA+GGG | 0.603089 | 5_3:+4696559 | None:intergenic |
| ACCTAGTGGTATTCCTGACA+AGG | 0.604915 | 5_3:-4697251 | Msa0792890:CDS |
| TGGAGATGACTTGTATAACA+TGG | 0.607014 | 5_3:-4696490 | Msa0792890:CDS |
| ACTTGGCAGAACCTGGCAAG+AGG | 0.608237 | 5_3:+4696558 | None:intergenic |
| TGGTGCAGAGCCAAATTGGA+AGG | 0.610894 | 5_3:+4696077 | None:intergenic |
| AAACTGATCAGCCCCGAATG+TGG | 0.611538 | 5_3:+4696806 | None:intergenic |
| TGTAGTTATGAAGATCTCTA+CGG | 0.612602 | 5_3:-4695540 | Msa0792890:CDS |
| TACTCTGAAATTGTAAACAG+TGG | 0.613535 | 5_3:+4695988 | None:intergenic |
| ATTTGGCTCTTATTGCAGGA+CGG | 0.614770 | 5_3:+4700374 | None:intergenic |
| CGGGGCTGATCAGTTTGACG+AGG | 0.615131 | 5_3:-4696799 | Msa0792890:CDS |
| GTATTCCTGACAAGGGTGGT+AGG | 0.618180 | 5_3:-4697243 | Msa0792890:CDS |
| TTTCGAGGATGAAGGAATGT+GGG | 0.619267 | 5_3:-4696679 | Msa0792890:CDS |
| CGGAGGATCACATGCCGGGG+TGG | 0.619996 | 5_3:-4695520 | Msa0792890:CDS |
| GAAGGAGGGTCACAATAAAG+TGG | 0.621467 | 5_3:-4696769 | Msa0792890:CDS |
| ACTTGAACCCGTCTGTGTGG+AGG | 0.629185 | 5_3:+4696430 | None:intergenic |
| TGCACTTATAGGAGCTTCTG+AGG | 0.629617 | 5_3:-4695690 | Msa0792890:CDS |
| GCTCTGCACCATAATATACT+CGG | 0.638311 | 5_3:-4696065 | Msa0792890:CDS |
| CCCTTGTCAGGAATACCACT+AGG | 0.642342 | 5_3:+4697250 | None:intergenic |
| CCTATATTGCATGTGCAAAG+TGG | 0.646472 | 5_3:-4695418 | Msa0792890:CDS |
| GTTTGACGAGGAGCACTCGA+AGG | 0.649207 | 5_3:-4696787 | Msa0792890:CDS |
| GCTCCTATAAGTGCATACTG+AGG | 0.657896 | 5_3:+4695698 | None:intergenic |
| TTGGTAACCTCCATTCCCCA+AGG | 0.658810 | 5_3:+4696839 | None:intergenic |
| ACCGAATATTGCCACATTCG+GGG | 0.660107 | 5_3:-4696817 | Msa0792890:CDS |
| CTTACTTGAACCCGTCTGTG+TGG | 0.660599 | 5_3:+4696427 | None:intergenic |
| CGGGATTGGAGTGAACCTAG+TGG | 0.661833 | 5_3:-4697265 | Msa0792890:CDS |
| TTACAGGACAGAGACGCCAT+GGG | 0.668038 | 5_3:+4696134 | None:intergenic |
| AAGCAAGACATGCTAGCTGG+TGG | 0.671852 | 5_3:+4695965 | None:intergenic |
| AAGTACTCGAGCCTTTGCAG+TGG | 0.678677 | 5_3:+4695741 | None:intergenic |
| GCTACTTACATAGTTGCCGA+GGG | 0.679598 | 5_3:+4695574 | None:intergenic |
| CTACGGAGGATCACATGCCG+GGG | 0.680505 | 5_3:-4695523 | Msa0792890:CDS |
| CCTAGTGGTATTCCTGACAA+GGG | 0.693962 | 5_3:-4697250 | Msa0792890:CDS |
| AGTGGTATTCCTGACAAGGG+TGG | 0.695849 | 5_3:-4697247 | Msa0792890:CDS |
| TGGTACAAGAGTATACAGCT+GGG | 0.699684 | 5_3:-4695398 | Msa0792890:CDS |
| GGGAATGAATCAATTCAATG+TGG | 0.710897 | 5_3:-4696915 | Msa0792890:CDS |
| AGTTATGAAGATCTCTACGG+AGG | 0.723212 | 5_3:-4695537 | Msa0792890:CDS |
| TACCGACATTTCAAGCCCAG+TGG | 0.725447 | 5_3:-4696585 | Msa0792890:CDS |
| TAAGTCCATCGATGTCAAGG+CGG | 0.726934 | 5_3:+4695445 | None:intergenic |
| CTGCACCATAATATACTCGG+TGG | 0.739304 | 5_3:-4696062 | Msa0792890:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAATAAAATTAATA+TGG | + | chr5_3:4695795-4695814 | None:intergenic | 0.0% |
| !!! | AAATTACAACTATTTTTTTA+AGG | - | chr5_3:4696897-4696916 | Msa0792890:CDS | 10.0% |
| !!! | GAAAATTTTAATAAAAAGAA+AGG | - | chr5_3:4697063-4697082 | Msa0792890:intron | 10.0% |
| !!! | AAATTTTAATAAAAAGAAAG+GGG | - | chr5_3:4697065-4697084 | Msa0792890:intron | 10.0% |
| !! | AAAGTAATATATAAAATTCA+TGG | - | chr5_3:4698099-4698118 | Msa0792890:intron | 10.0% |
| !! | TAGTTGAAAAAAAACAAAAA+AGG | - | chr5_3:4696275-4696294 | Msa0792890:intron | 15.0% |
| !!! | TTATCAGTTTTATGTATAAA+AGG | - | chr5_3:4696422-4696441 | Msa0792890:intron | 15.0% |
| !! | ATAATGTTAAAGAATTATTG+TGG | - | chr5_3:4696632-4696651 | Msa0792890:CDS | 15.0% |
| !! | TAATGTTAAAGAATTATTGT+GGG | - | chr5_3:4696633-4696652 | Msa0792890:CDS | 15.0% |
| !! | TTTAGATGTATATATTTATG+AGG | - | chr5_3:4697004-4697023 | Msa0792890:intron | 15.0% |
| !!! | ATAAATTTTCTCTTATATAC+TGG | - | chr5_3:4698024-4698043 | Msa0792890:intron | 15.0% |
| !! | CAAAATTAGCTAAATAATAT+TGG | + | chr5_3:4699749-4699768 | None:intergenic | 15.0% |
| !!! | CAATATTATTTAGCTAATTT+TGG | - | chr5_3:4699747-4699766 | Msa0792890:intron | 15.0% |
| !!! | GTATGTCAAAAACAATTTTA+AGG | + | chr5_3:4695465-4695484 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTCAACTAACA+AGG | + | chr5_3:4696272-4696291 | None:intergenic | 20.0% |
| !!! | ATTTTAGATAGCTTATCATA+AGG | - | chr5_3:4696341-4696360 | Msa0792890:intron | 20.0% |
| !!! | TTACAACTTCATTTTTTTGA+AGG | - | chr5_3:4696927-4696946 | Msa0792890:CDS | 20.0% |
| !!! | ATGATCGATTTACTTTTTTA+TGG | - | chr5_3:4697030-4697049 | Msa0792890:intron | 20.0% |
| !!! | ACTTTTTTATGGTGTAAAAA+AGG | - | chr5_3:4697041-4697060 | Msa0792890:intron | 20.0% |
| !! | ATGAGTCAATTTATTGTATT+TGG | + | chr5_3:4697353-4697372 | None:intergenic | 20.0% |
| !!! | ACTCATTCTAGTAATTTTAT+AGG | + | chr5_3:4697382-4697401 | None:intergenic | 20.0% |
| !! | TTAAATTAACCCACTTAAAT+TGG | + | chr5_3:4697881-4697900 | None:intergenic | 20.0% |
| !!! | TTTAACTACTTTTTTCCAAA+AGG | + | chr5_3:4698141-4698160 | None:intergenic | 20.0% |
| !! | TATAAACACCATCTTATTAA+TGG | + | chr5_3:4698237-4698256 | None:intergenic | 20.0% |
| !!! | TGTTTATAGTGCTTTTATAA+AGG | - | chr5_3:4698249-4698268 | Msa0792890:intron | 20.0% |
| !! | AATATATTGTTAGGTTACTT+AGG | + | chr5_3:4698288-4698307 | None:intergenic | 20.0% |
| !! | TATTATGTTATCTATATGCA+TGG | + | chr5_3:4698432-4698451 | None:intergenic | 20.0% |
| !! | TCACTATAATATTAAGAACA+TGG | - | chr5_3:4698709-4698728 | Msa0792890:intron | 20.0% |
| ! | AGAGGAATAATGTACATATT+TGG | + | chr5_3:4695418-4695437 | None:intergenic | 25.0% |
| !!! | CATGGTTTTAAGAATTAAAG+AGG | + | chr5_3:4695436-4695455 | None:intergenic | 25.0% |
| !! | TGTTTTCGTAAGAAAAAGTA+TGG | + | chr5_3:4696052-4696071 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCCTCAAATTCC+CGG | + | chr5_3:4696152-4696171 | None:intergenic | 25.0% |
| ! | CATAAGGAATAGTAAATGAA+AGG | - | chr5_3:4696357-4696376 | Msa0792890:intron | 25.0% |
| !! | AAAAGGAAAAACGAAAGTTT+TGG | - | chr5_3:4696439-4696458 | Msa0792890:CDS | 25.0% |
| !! | TTTGAATTTTGTATGCCAAA+TGG | + | chr5_3:4696473-4696492 | None:intergenic | 25.0% |
| !!! | TACCTAAACAATTCGTTTTT+TGG | - | chr5_3:4696789-4696808 | Msa0792890:CDS | 25.0% |
| !!! | GTCAATTAAAGTTGATGTAT+TGG | - | chr5_3:4697314-4697333 | Msa0792890:intron | 25.0% |
| ! | TTATTCTGAGTATGGAAAAT+TGG | - | chr5_3:4697553-4697572 | Msa0792890:intron | 25.0% |
| ! | TCACATCTATAATCTTCTTT+AGG | - | chr5_3:4697582-4697601 | Msa0792890:intron | 25.0% |
| !! | ATGAAAATCAACAATCCTTT+TGG | - | chr5_3:4698123-4698142 | Msa0792890:intron | 25.0% |
| !! | GACTGAAATAATTTTGTACA+AGG | + | chr5_3:4698519-4698538 | None:intergenic | 25.0% |
| !!! | TTTTCTGTCTTATGTTGTTT+TGG | + | chr5_3:4698581-4698600 | None:intergenic | 25.0% |
| !!! | GCTAAAAATAAAAGAGTGTT+TGG | + | chr5_3:4699022-4699041 | None:intergenic | 25.0% |
| ! | TGACTAATCAATAAATCTTC+TGG | - | chr5_3:4699058-4699077 | Msa0792890:intron | 25.0% |
| !!! | ACACACATAAGAAAGTATTA+TGG | + | chr5_3:4699695-4699714 | None:intergenic | 25.0% |
| !!! | TCAAATCATTTTAGTTCAGT+AGG | + | chr5_3:4699822-4699841 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTTTTCCCACAAA+TGG | + | chr5_3:4700184-4700203 | None:intergenic | 25.0% |
| !! | ACAATTTTAAGGATGCTTCA+TGG | + | chr5_3:4695454-4695473 | None:intergenic | 30.0% |
| TTGCAAGACATTTGATATTC+TGG | + | chr5_3:4695932-4695951 | None:intergenic | 30.0% | |
| TCTTAAAGCTTATTGAATCC+CGG | - | chr5_3:4696130-4696149 | Msa0792890:CDS | 30.0% | |
| !!! | TTTTTTTTCCTCAAATTCCC+GGG | + | chr5_3:4696151-4696170 | None:intergenic | 30.0% |
| TACGTATAGTTTATGATAGC+TGG | - | chr5_3:4696207-4696226 | Msa0792890:intron | 30.0% | |
| CAAGTTTAAGCATGTGAATT+CGG | + | chr5_3:4696574-4696593 | None:intergenic | 30.0% | |
| TTGCTTCACACTTACTTATT+TGG | - | chr5_3:4696594-4696613 | Msa0792890:CDS | 30.0% | |
| TGCTTCACACTTACTTATTT+GGG | - | chr5_3:4696595-4696614 | Msa0792890:CDS | 30.0% | |
| ATAATGTCCTTCCCTTAAAA+GGG | + | chr5_3:4696722-4696741 | None:intergenic | 30.0% | |
| ! | ATGATCTAAAGTTTGACTGA+AGG | - | chr5_3:4696740-4696759 | Msa0792890:CDS | 30.0% |
| CACCAAAAAACGAATTGTTT+AGG | + | chr5_3:4696794-4696813 | None:intergenic | 30.0% | |
| GTGAATATTCATAGTCATAG+AGG | - | chr5_3:4697097-4697116 | Msa0792890:intron | 30.0% | |
| !!! | TTTTTAGTTACCATAGTTCC+CGG | + | chr5_3:4697154-4697173 | None:intergenic | 30.0% |
| ! | TGATAAGATTTTGCACTACT+TGG | - | chr5_3:4697240-4697259 | Msa0792890:CDS | 30.0% |
| ! | GATAAGATTTTGCACTACTT+GGG | - | chr5_3:4697241-4697260 | Msa0792890:CDS | 30.0% |
| ATGTAACCAAATGATCATGT+GGG | - | chr5_3:4697292-4697311 | Msa0792890:CDS | 30.0% | |
| GAGTAATAATTAGCCCAAAA+TGG | - | chr5_3:4697398-4697417 | Msa0792890:intron | 30.0% | |
| ! | CCAATTTACTCTTCCATTTT+GGG | + | chr5_3:4697414-4697433 | None:intergenic | 30.0% |
| ! | ACCAATTTACTCTTCCATTT+TGG | + | chr5_3:4697415-4697434 | None:intergenic | 30.0% |
| !!! | GGTATACTTTTTTTGACAAG+AGG | - | chr5_3:4697465-4697484 | Msa0792890:intron | 30.0% |
| !!! | TACTTTTTTTGACAAGAGGT+TGG | - | chr5_3:4697469-4697488 | Msa0792890:intron | 30.0% |
| TACTAACTACCTAGTTATTG+AGG | - | chr5_3:4697502-4697521 | Msa0792890:intron | 30.0% | |
| ACTAACTACCTAGTTATTGA+GGG | - | chr5_3:4697503-4697522 | Msa0792890:intron | 30.0% | |
| GTTGATTAATATGCATGCTA+TGG | - | chr5_3:4697529-4697548 | Msa0792890:intron | 30.0% | |
| TTGTTTCGTGTAAGTTAGTT+TGG | - | chr5_3:4697605-4697624 | Msa0792890:intron | 30.0% | |
| ! | TTGCATGGAAGTATATTACT+TGG | + | chr5_3:4697652-4697671 | None:intergenic | 30.0% |
| TCACGTAATATACATTTGCA+TGG | + | chr5_3:4697667-4697686 | None:intergenic | 30.0% | |
| ! | TAATGTATGCTTTGAGTAAG+TGG | - | chr5_3:4697927-4697946 | Msa0792890:intron | 30.0% |
| ! | AATGTATGCTTTGAGTAAGT+GGG | - | chr5_3:4697928-4697947 | Msa0792890:intron | 30.0% |
| ATACTGGTACTCAAAAAGAA+TGG | - | chr5_3:4698040-4698059 | Msa0792890:intron | 30.0% | |
| ! | CTTGAAGACACTTTTGTATA+TGG | + | chr5_3:4698067-4698086 | None:intergenic | 30.0% |
| CATCTTATTAATGGTTTCAG+AGG | + | chr5_3:4698228-4698247 | None:intergenic | 30.0% | |
| !! | CTCTGAAACCATTAATAAGA+TGG | - | chr5_3:4698226-4698245 | Msa0792890:intron | 30.0% |
| TTTCCTAAGTGACTCTTATT+GGG | - | chr5_3:4698926-4698945 | Msa0792890:intron | 30.0% | |
| !! | TGGCTTTGATATATATGACA+GGG | - | chr5_3:4699078-4699097 | Msa0792890:intron | 30.0% |
| ! | CTTTAGGTTTAATCAAGAAG+AGG | + | chr5_3:4699131-4699150 | None:intergenic | 30.0% |
| CTCTTCTTGATTAAACCTAA+AGG | - | chr5_3:4699129-4699148 | Msa0792890:intron | 30.0% | |
| TTGATTAAACCTAAAGGTTG+TGG | - | chr5_3:4699135-4699154 | Msa0792890:intron | 30.0% | |
| TGATTAAACCTAAAGGTTGT+GGG | - | chr5_3:4699136-4699155 | Msa0792890:intron | 30.0% | |
| AATGTGGAAAACATTCAAGT+TGG | - | chr5_3:4699172-4699191 | Msa0792890:intron | 30.0% | |
| ! | ATGTGGAAAACATTCAAGTT+GGG | - | chr5_3:4699173-4699192 | Msa0792890:intron | 30.0% |
| AAACAATATCAGTGCGATAA+AGG | + | chr5_3:4699448-4699467 | None:intergenic | 30.0% | |
| AAAGTTGAAATGCCATCAAA+TGG | - | chr5_3:4699561-4699580 | Msa0792890:intron | 30.0% | |
| CTTGTATAACATGGATACAA+AGG | - | chr5_3:4699590-4699609 | Msa0792890:intron | 30.0% | |
| !!! | TCCATTTTTTGTTGTGATGA+AGG | - | chr5_3:4699849-4699868 | Msa0792890:intron | 30.0% |
| ACCTTCATCACAACAAAAAA+TGG | + | chr5_3:4699853-4699872 | None:intergenic | 30.0% | |
| ! | ATTGTAAACAGTGGTTTTCA+TGG | + | chr5_3:4700077-4700096 | None:intergenic | 30.0% |
| !! | TACTCTGAAATTGTAAACAG+TGG | + | chr5_3:4700086-4700105 | None:intergenic | 30.0% |
| TGTTATAGCTGTAATAGCAA+TGG | - | chr5_3:4700252-4700271 | Msa0792890:intron | 30.0% | |
| TGTAGTTATGAAGATCTCTA+CGG | - | chr5_3:4700531-4700550 | Msa0792890:intron | 30.0% | |
| ! | AGAGTTAGAAGTCTCTAAAG+AGG | - | chr5_3:4695363-4695382 | Msa0792890:CDS | 35.0% |
| ! | TCAGAAGAATTGACTCTAGA+TGG | - | chr5_3:4695656-4695675 | Msa0792890:CDS | 35.0% |
| !! | GATGGAAGTGTTGATTTCAA+TGG | - | chr5_3:4695674-4695693 | Msa0792890:CDS | 35.0% |
| TCATTTGAACTGCACTTACT+CGG | - | chr5_3:4695958-4695977 | Msa0792890:CDS | 35.0% | |
| CTTAAAGCTTATTGAATCCC+GGG | - | chr5_3:4696131-4696150 | Msa0792890:CDS | 35.0% | |
| AGTTTATGATAGCTGGAGAA+AGG | - | chr5_3:4696214-4696233 | Msa0792890:intron | 35.0% | |
| !!! | GTTTTGGAACGTTTTCCATT+TGG | - | chr5_3:4696455-4696474 | Msa0792890:CDS | 35.0% |
| GCTTCACACTTACTTATTTG+GGG | - | chr5_3:4696596-4696615 | Msa0792890:CDS | 35.0% | |
| ! | ATGTTAACCATCCCCTTTTA+AGG | - | chr5_3:4696707-4696726 | Msa0792890:CDS | 35.0% |
| ! | TGTTAACCATCCCCTTTTAA+GGG | - | chr5_3:4696708-4696727 | Msa0792890:CDS | 35.0% |
| TAATGTCCTTCCCTTAAAAG+GGG | + | chr5_3:4696721-4696740 | None:intergenic | 35.0% | |
| CATAATGTCCTTCCCTTAAA+AGG | + | chr5_3:4696723-4696742 | None:intergenic | 35.0% | |
| CAAAATGCAGAAAAGAAGCA+TGG | - | chr5_3:4697179-4697198 | Msa0792890:CDS | 35.0% | |
| GTAGTGCAAAATCTTATCAC+TGG | + | chr5_3:4697239-4697258 | None:intergenic | 35.0% | |
| CATGTAACCAAATGATCATG+TGG | - | chr5_3:4697291-4697310 | Msa0792890:CDS | 35.0% | |
| AATTGACCCACATGATCATT+TGG | + | chr5_3:4697301-4697320 | None:intergenic | 35.0% | |
| CCCAAAATGGAAGAGTAAAT+TGG | - | chr5_3:4697411-4697430 | Msa0792890:intron | 35.0% | |
| !! | ATTGGTATTGACCCTACAAA+AGG | - | chr5_3:4697429-4697448 | Msa0792890:intron | 35.0% |
| TCAACTAACCCTCAATAACT+AGG | + | chr5_3:4697514-4697533 | None:intergenic | 35.0% | |
| GCTATGGTTTATTCTGAGTA+TGG | - | chr5_3:4697545-4697564 | Msa0792890:intron | 35.0% | |
| TAACCCACTTAAATTGGCAT+CGG | + | chr5_3:4697875-4697894 | None:intergenic | 35.0% | |
| ! | ACTTCAAAAAGCAGGTTTTG+TGG | + | chr5_3:4698196-4698215 | None:intergenic | 35.0% |
| GTGATAACACTTCAAAAAGC+AGG | + | chr5_3:4698204-4698223 | None:intergenic | 35.0% | |
| TAGGTTACTTAGGTATGCTT+AGG | + | chr5_3:4698278-4698297 | None:intergenic | 35.0% | |
| ATCTTGTGTGTGCATATGTA+TGG | - | chr5_3:4698329-4698348 | Msa0792890:intron | 35.0% | |
| ATAGACAACCCTTTACAGAA+TGG | - | chr5_3:4698362-4698381 | Msa0792890:intron | 35.0% | |
| CATCACAACCATTCTGTAAA+GGG | + | chr5_3:4698373-4698392 | None:intergenic | 35.0% | |
| TGTTTACATCTTCTCTCTAG+TGG | - | chr5_3:4698899-4698918 | Msa0792890:intron | 35.0% | |
| GTTTACATCTTCTCTCTAGT+GGG | - | chr5_3:4698900-4698919 | Msa0792890:intron | 35.0% | |
| CTTTCCTAAGTGACTCTTAT+TGG | - | chr5_3:4698925-4698944 | Msa0792890:intron | 35.0% | |
| TTCCTAAGTGACTCTTATTG+GGG | - | chr5_3:4698927-4698946 | Msa0792890:intron | 35.0% | |
| TAAAACATGTGCTGTCTTTC+AGG | - | chr5_3:4698956-4698975 | Msa0792890:intron | 35.0% | |
| !! | CTGGCTTTGATATATATGAC+AGG | - | chr5_3:4699077-4699096 | Msa0792890:intron | 35.0% |
| GGGAATGAATCAATTCAATG+TGG | - | chr5_3:4699156-4699175 | Msa0792890:intron | 35.0% | |
| !! | AAAACATTCAAGTTGGGAGA+TGG | - | chr5_3:4699179-4699198 | Msa0792890:intron | 35.0% |
| !! | AAACATTCAAGTTGGGAGAT+GGG | - | chr5_3:4699180-4699199 | Msa0792890:intron | 35.0% |
| TAGGTAGAAGTAGCTAAAGA+AGG | + | chr5_3:4699328-4699347 | None:intergenic | 35.0% | |
| !! | TTCTACCTAGCTTTGAACTT+TGG | - | chr5_3:4699339-4699358 | Msa0792890:intron | 35.0% |
| !! | TCTACCTAGCTTTGAACTTT+GGG | - | chr5_3:4699340-4699359 | Msa0792890:intron | 35.0% |
| ! | GCACTGATATTGTTTCTTGT+TGG | - | chr5_3:4699453-4699472 | Msa0792890:intron | 35.0% |
| TACAAGTCATCTCCATTTGA+TGG | + | chr5_3:4699576-4699595 | None:intergenic | 35.0% | |
| ! | TGGAGATGACTTGTATAACA+TGG | - | chr5_3:4699581-4699600 | Msa0792890:intron | 35.0% |
| AGTATTATGGTTTCAGCTGA+AGG | + | chr5_3:4699682-4699701 | None:intergenic | 35.0% | |
| ! | AGTTCAGTAGGATCTAGAAT+GGG | + | chr5_3:4699810-4699829 | None:intergenic | 35.0% |
| TAGTTCAGTAGGATCTAGAA+TGG | + | chr5_3:4699811-4699830 | None:intergenic | 35.0% | |
| ! | TTTGTTGTGATGAAGGTTCT+TGG | - | chr5_3:4699856-4699875 | Msa0792890:intron | 35.0% |
| AGAGATCAAGATAACCAGAA+AGG | - | chr5_3:4699902-4699921 | Msa0792890:intron | 35.0% | |
| ACTTCTTCAACTTGACTTAC+AGG | + | chr5_3:4699956-4699975 | None:intergenic | 35.0% | |
| GAAAACCACCGAGTATATTA+TGG | + | chr5_3:4700017-4700036 | None:intergenic | 35.0% | |
| ! | ACAAATGGCTTCTCTTTTTG+TGG | - | chr5_3:4700039-4700058 | Msa0792890:intron | 35.0% |
| ACTTAAAAAGTCCGACTCTA+AGG | - | chr5_3:4700195-4700214 | Msa0792890:intron | 35.0% | |
| CTTAAAAAGTCCGACTCTAA+GGG | - | chr5_3:4700196-4700215 | Msa0792890:intron | 35.0% | |
| !! | CTGGACTAGTTGAATGTTAT+AGG | - | chr5_3:4700281-4700300 | Msa0792890:intron | 35.0% |
| ! | TCTGAGGTGTTTATGTATGT+AGG | - | chr5_3:4700397-4700416 | Msa0792890:CDS | 35.0% |
| ! | CTGAGGTGTTTATGTATGTA+GGG | - | chr5_3:4700398-4700417 | Msa0792890:CDS | 35.0% |
| CAACTATGTAAGTAGCTTAC+TGG | - | chr5_3:4700504-4700523 | Msa0792890:intron | 35.0% | |
| ATCCCAGTAAACCTCAATAA+AGG | - | chr5_3:4700574-4700593 | Msa0792890:intron | 35.0% | |
| GACCTTTATTGAGGTTTACT+GGG | + | chr5_3:4700579-4700598 | None:intergenic | 35.0% | |
| TGACCTTTATTGAGGTTTAC+TGG | + | chr5_3:4700580-4700599 | None:intergenic | 35.0% | |
| TATCTAGGTGACCTTTATTG+AGG | + | chr5_3:4700588-4700607 | None:intergenic | 35.0% | |
| TCAATAAAGGTCACCTAGAT+AGG | - | chr5_3:4700587-4700606 | Msa0792890:intron | 35.0% | |
| AGAGGAAGTAAAACCTATCT+AGG | + | chr5_3:4700603-4700622 | None:intergenic | 35.0% | |
| AATTAAGTCCATCGATGTCA+AGG | + | chr5_3:4700632-4700651 | None:intergenic | 35.0% | |
| !! | ATTTGGCTCTTATTGCAGGA+CGG | + | chr5_3:4695700-4695719 | None:intergenic | 40.0% |
| TAAGAGCCAAATCTGGAAGA+TGG | - | chr5_3:4695708-4695727 | Msa0792890:CDS | 40.0% | |
| !!! | TGTGTGTGAGTTTTGTTACG+AGG | + | chr5_3:4695847-4695866 | None:intergenic | 40.0% |
| TATTGAATCCCGGGAATTTG+AGG | - | chr5_3:4696140-4696159 | Msa0792890:CDS | 40.0% | |
| !! | AGCTTTGTTGCATGCAAACT+TGG | - | chr5_3:4696507-4696526 | Msa0792890:CDS | 40.0% |
| TTGTTGCATGCAAACTTGGA+AGG | - | chr5_3:4696511-4696530 | Msa0792890:CDS | 40.0% | |
| GTGGATAAAGTAGAGTTAGC+TGG | + | chr5_3:4696552-4696571 | None:intergenic | 40.0% | |
| GTTTAAGCATGTGAATTCGG+TGG | + | chr5_3:4696571-4696590 | None:intergenic | 40.0% | |
| CTCAACAAAAGACAAGAGAC+CGG | - | chr5_3:4697132-4697151 | Msa0792890:CDS | 40.0% | |
| TCAACAAAAGACAAGAGACC+GGG | - | chr5_3:4697133-4697152 | Msa0792890:CDS | 40.0% | |
| ! | AAGATTTTGCACTACTTGGG+TGG | - | chr5_3:4697244-4697263 | Msa0792890:CDS | 40.0% |
| ! | GCTATCGTGATCCTTTTGTA+GGG | + | chr5_3:4697443-4697462 | None:intergenic | 40.0% |
| ! | AGCTATCGTGATCCTTTTGT+AGG | + | chr5_3:4697444-4697463 | None:intergenic | 40.0% |
| ACAAAAGGATCACGATAGCT+AGG | - | chr5_3:4697444-4697463 | Msa0792890:intron | 40.0% | |
| ATGATATAACCCACTTGCGT+TGG | - | chr5_3:4697786-4697805 | Msa0792890:intron | 40.0% | |
| ATTGATCCTAAGACCTCAAG+AGG | + | chr5_3:4697847-4697866 | None:intergenic | 40.0% | |
| AACCCACTTAAATTGGCATC+GGG | + | chr5_3:4697874-4697893 | None:intergenic | 40.0% | |
| TTGTGTGTGCATATGTATGG+TGG | - | chr5_3:4698332-4698351 | Msa0792890:intron | 40.0% | |
| CCATCACAACCATTCTGTAA+AGG | + | chr5_3:4698374-4698393 | None:intergenic | 40.0% | |
| CCTTTACAGAATGGTTGTGA+TGG | - | chr5_3:4698371-4698390 | Msa0792890:intron | 40.0% | |
| AATGGTTGTGATGGCTGATT+AGG | - | chr5_3:4698380-4698399 | Msa0792890:intron | 40.0% | |
| ! | GAAGGTGTAGATAAGCATGA+TGG | - | chr5_3:4698676-4698695 | Msa0792890:intron | 40.0% |
| TTGATCAGTGAACCAATGTC+TGG | - | chr5_3:4698767-4698786 | Msa0792890:intron | 40.0% | |
| CCATTTGCTCACATTGTTAG+CGG | + | chr5_3:4698871-4698890 | None:intergenic | 40.0% | |
| AACAATGTGAGCAAATGGAC+TGG | - | chr5_3:4698873-4698892 | Msa0792890:intron | 40.0% | |
| TTCCCCAATAAGAGTCACTT+AGG | + | chr5_3:4698932-4698951 | None:intergenic | 40.0% | |
| GATTCATTCCCACAACCTTT+AGG | + | chr5_3:4699147-4699166 | None:intergenic | 40.0% | |
| !! | AACATTCAAGTTGGGAGATG+GGG | - | chr5_3:4699181-4699200 | Msa0792890:intron | 40.0% |
| TCGATCTATCTCATTGCCTT+GGG | - | chr5_3:4699216-4699235 | Msa0792890:intron | 40.0% | |
| CAACCGAATATTGCCACATT+CGG | - | chr5_3:4699252-4699271 | Msa0792890:intron | 40.0% | |
| AACCGAATATTGCCACATTC+GGG | - | chr5_3:4699253-4699272 | Msa0792890:intron | 40.0% | |
| ATCCTCGAAATAGACGAGAA+TGG | + | chr5_3:4699382-4699401 | None:intergenic | 40.0% | |
| ATTTCGAGGATGAAGGAATG+TGG | - | chr5_3:4699391-4699410 | Msa0792890:intron | 40.0% | |
| TTTCGAGGATGAAGGAATGT+GGG | - | chr5_3:4699392-4699411 | Msa0792890:intron | 40.0% | |
| ! | GAGGATTTTTCTGTTCGCAT+CGG | + | chr5_3:4699625-4699644 | None:intergenic | 40.0% |
| AGAAAAATCCTCCACACAGA+CGG | - | chr5_3:4699633-4699652 | Msa0792890:intron | 40.0% | |
| TACTGAGACTCCTTCCAATT+TGG | - | chr5_3:4699984-4700003 | Msa0792890:intron | 40.0% | |
| ATTATGGTGCAGAGCCAAAT+TGG | + | chr5_3:4700001-4700020 | None:intergenic | 40.0% | |
| GCTCTGCACCATAATATACT+CGG | - | chr5_3:4700006-4700025 | Msa0792890:intron | 40.0% | |
| TCGAATTCTCGATCCATTTG+TGG | - | chr5_3:4700168-4700187 | Msa0792890:intron | 40.0% | |
| CGAATTCTCGATCCATTTGT+GGG | - | chr5_3:4700169-4700188 | Msa0792890:intron | 40.0% | |
| GTAATAGCAATGGTTTCAGC+TGG | - | chr5_3:4700262-4700281 | Msa0792890:intron | 40.0% | |
| ATCCCTCAGTATGCACTTAT+AGG | - | chr5_3:4700370-4700389 | Msa0792890:CDS | 40.0% | |
| CTCCTATAAGTGCATACTGA+GGG | + | chr5_3:4700375-4700394 | None:intergenic | 40.0% | |
| TTCAATGCTCAAACACCAGA+TGG | - | chr5_3:4700433-4700452 | Msa0792890:CDS | 40.0% | |
| CCAGATGGCTTAAAGAGTTT+CGG | - | chr5_3:4700448-4700467 | Msa0792890:CDS | 40.0% | |
| AGTTATGAAGATCTCTACGG+AGG | - | chr5_3:4700534-4700553 | Msa0792890:intron | 40.0% | |
| CCACTTTGCACATGCAATAT+AGG | + | chr5_3:4700656-4700675 | None:intergenic | 40.0% | |
| CCTATATTGCATGTGCAAAG+TGG | - | chr5_3:4700653-4700672 | Msa0792890:intron | 40.0% | |
| ! | TGGTACAAGAGTATACAGCT+GGG | - | chr5_3:4700673-4700692 | Msa0792890:intron | 40.0% |
| !! | CCAGATTTGGCTCTTATTGC+AGG | + | chr5_3:4695704-4695723 | None:intergenic | 45.0% |
| CCTGCAATAAGAGCCAAATC+TGG | - | chr5_3:4695701-4695720 | Msa0792890:CDS | 45.0% | |
| AGCTGACCATCTTCCAGATT+TGG | + | chr5_3:4695717-4695736 | None:intergenic | 45.0% | |
| AAATCTGGAAGATGGTCAGC+TGG | - | chr5_3:4695716-4695735 | Msa0792890:CDS | 45.0% | |
| ! | TGATAGCTGGAGAAAGGTGT+TGG | - | chr5_3:4696220-4696239 | Msa0792890:intron | 45.0% |
| !! | GAGAAAGGTGTTGGTGTTGA+TGG | - | chr5_3:4696229-4696248 | Msa0792890:intron | 45.0% |
| AAAGTAGAGTTAGCTGGCAC+TGG | + | chr5_3:4696546-4696565 | None:intergenic | 45.0% | |
| !! | AACCATCCCCTTTTAAGGGA+AGG | - | chr5_3:4696712-4696731 | Msa0792890:CDS | 45.0% |
| ! | CGGTCTCTTGTCTTTTGTTG+AGG | + | chr5_3:4697134-4697153 | None:intergenic | 45.0% |
| TCCCCGATGCCAATTTAAGT+GGG | - | chr5_3:4697869-4697888 | Msa0792890:intron | 45.0% | |
| ACCCACTTAAATTGGCATCG+GGG | + | chr5_3:4697873-4697892 | None:intergenic | 45.0% | |
| GTATACATCTGCTCTGCACT+TGG | - | chr5_3:4698643-4698662 | Msa0792890:intron | 45.0% | |
| GCACTTGGCATAAAGCATGA+AGG | - | chr5_3:4698658-4698677 | Msa0792890:intron | 45.0% | |
| ! | CTGGCAACTCTGGCATTTTT+CGG | - | chr5_3:4698786-4698805 | Msa0792890:intron | 45.0% |
| ! | TGGCAACTCTGGCATTTTTC+GGG | - | chr5_3:4698787-4698806 | Msa0792890:intron | 45.0% |
| !!! | ACTCTGGCATTTTTCGGGAT+TGG | - | chr5_3:4698792-4698811 | Msa0792890:intron | 45.0% |
| ACCTAGTGGTATTCCTGACA+AGG | - | chr5_3:4698820-4698839 | Msa0792890:intron | 45.0% | |
| CCTAGTGGTATTCCTGACAA+GGG | - | chr5_3:4698821-4698840 | Msa0792890:intron | 45.0% | |
| CCGCTAACAATGTGAGCAAA+TGG | - | chr5_3:4698868-4698887 | Msa0792890:intron | 45.0% | |
| GAGGTACGATGACAAGGATA+AGG | + | chr5_3:4699112-4699131 | None:intergenic | 45.0% | |
| ! | CAAGAAGAGGTACGATGACA+AGG | + | chr5_3:4699118-4699137 | None:intergenic | 45.0% |
| CTCGATCTATCTCATTGCCT+TGG | - | chr5_3:4699215-4699234 | Msa0792890:intron | 45.0% | |
| CGATCTATCTCATTGCCTTG+GGG | - | chr5_3:4699217-4699236 | Msa0792890:intron | 45.0% | |
| TATCTCATTGCCTTGGGGAA+TGG | - | chr5_3:4699222-4699241 | Msa0792890:intron | 45.0% | |
| CGAATGTGGCAATATTCGGT+TGG | + | chr5_3:4699254-4699273 | None:intergenic | 45.0% | |
| ACCGAATATTGCCACATTCG+GGG | - | chr5_3:4699254-4699273 | Msa0792890:intron | 45.0% | |
| GAAGGAGGGTCACAATAAAG+TGG | - | chr5_3:4699302-4699321 | Msa0792890:intron | 45.0% | |
| GTTGCCCAAAGTTCAAAGCT+AGG | + | chr5_3:4699347-4699366 | None:intergenic | 45.0% | |
| CACCATTCTCGTCTATTTCG+AGG | - | chr5_3:4699377-4699396 | Msa0792890:intron | 45.0% | |
| CTCGTCTATTTCGAGGATGA+AGG | - | chr5_3:4699384-4699403 | Msa0792890:intron | 45.0% | |
| GGCTTGAAATGTCGGTACTT+TGG | + | chr5_3:4699483-4699502 | None:intergenic | 45.0% | |
| TTGATGCAGCAACAAGGACT+TGG | + | chr5_3:4699533-4699552 | None:intergenic | 45.0% | |
| AAGTCCTTGTTGCTGCATCA+AGG | - | chr5_3:4699532-4699551 | Msa0792890:intron | 45.0% | |
| CTTTCCTTGATGCAGCAACA+AGG | + | chr5_3:4699539-4699558 | None:intergenic | 45.0% | |
| ! | GATTTTTCTGTTCGCATCGG+TGG | + | chr5_3:4699622-4699641 | None:intergenic | 45.0% |
| GAAAAATCCTCCACACAGAC+GGG | - | chr5_3:4699634-4699653 | Msa0792890:intron | 45.0% | |
| CTGTTTCATGCTTGCAGTCT+CGG | + | chr5_3:4699722-4699741 | None:intergenic | 45.0% | |
| CTGCACCATAATATACTCGG+TGG | - | chr5_3:4700009-4700028 | Msa0792890:intron | 45.0% | |
| ! | CTCGGTGGTTTTCACACAAA+TGG | - | chr5_3:4700024-4700043 | Msa0792890:intron | 45.0% |
| ! | GCTTCTCTTTTTGTGGAGCA+AGG | - | chr5_3:4700046-4700065 | Msa0792890:intron | 45.0% |
| TCAAAGCAAGACATGCTAGC+TGG | + | chr5_3:4700112-4700131 | None:intergenic | 45.0% | |
| ACTTACGGAGCTTCAGAGAA+TGG | - | chr5_3:4700219-4700238 | Msa0792890:intron | 45.0% | |
| CTTACGGAGCTTCAGAGAAT+GGG | - | chr5_3:4700220-4700239 | Msa0792890:intron | 45.0% | |
| CGAGTACTTTGAGCATCTTC+TGG | - | chr5_3:4700344-4700363 | Msa0792890:CDS | 45.0% | |
| GCTCCTATAAGTGCATACTG+AGG | + | chr5_3:4700376-4700395 | None:intergenic | 45.0% | |
| TGCACTTATAGGAGCTTCTG+AGG | - | chr5_3:4700381-4700400 | Msa0792890:CDS | 45.0% | |
| CCGAAACTCTTTAAGCCATC+TGG | + | chr5_3:4700451-4700470 | None:intergenic | 45.0% | |
| TGCATGACATCCATTTCCCT+CGG | - | chr5_3:4700481-4700500 | Msa0792890:intron | 45.0% | |
| TACATAGTTGCCGAGGGAAA+TGG | + | chr5_3:4700494-4700513 | None:intergenic | 45.0% | |
| GCTACTTACATAGTTGCCGA+GGG | + | chr5_3:4700500-4700519 | None:intergenic | 45.0% | |
| AGCTACTTACATAGTTGCCG+AGG | + | chr5_3:4700501-4700520 | None:intergenic | 45.0% | |
| TAAGTCCATCGATGTCAAGG+CGG | + | chr5_3:4700629-4700648 | None:intergenic | 45.0% | |
| ! | GTGGTACAAGAGTATACAGC+TGG | - | chr5_3:4700672-4700691 | Msa0792890:intron | 45.0% |
| !!! | TTTTATTTTATTATATACTT+TGG | - | chr5_3:4695801-4695820 | Msa0792890:CDS | 5.0% |
| !!! | AAAATTTTAATAAAAAGAAA+GGG | - | chr5_3:4697064-4697083 | Msa0792890:intron | 5.0% |
| !!! | TTATTTTATAATATATTGTT+AGG | + | chr5_3:4698297-4698316 | None:intergenic | 5.0% |
| !! | TGTTGGTGTTGATGGCGTAG+AGG | - | chr5_3:4696237-4696256 | Msa0792890:intron | 50.0% |
| GTCCTTCCCTTAAAAGGGGA+TGG | + | chr5_3:4696717-4696736 | None:intergenic | 50.0% | |
| AGACAAGAGACCGGGAACTA+TGG | - | chr5_3:4697141-4697160 | Msa0792890:CDS | 50.0% | |
| !! | TTGGCCTGGTGGTATTGGTT+TGG | - | chr5_3:4697805-4697824 | Msa0792890:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGGTTT+GGG | - | chr5_3:4697806-4697825 | Msa0792890:intron | 50.0% |
| !! | GTGGTATTGGTTTGGGACCT+GGG | - | chr5_3:4697813-4697832 | Msa0792890:intron | 50.0% |
| TGTGCTCCTCTTGAGGTCTT+AGG | - | chr5_3:4697838-4697857 | Msa0792890:intron | 50.0% | |
| CTCCCCGATGCCAATTTAAG+TGG | - | chr5_3:4697868-4697887 | Msa0792890:intron | 50.0% | |
| GAACCAATGTCTGGCAACTC+TGG | - | chr5_3:4698776-4698795 | Msa0792890:intron | 50.0% | |
| ATGCCAGAGTTGCCAGACAT+TGG | + | chr5_3:4698782-4698801 | None:intergenic | 50.0% | |
| CCCTTGTCAGGAATACCACT+AGG | + | chr5_3:4698824-4698843 | None:intergenic | 50.0% | |
| AGTGGTATTCCTGACAAGGG+TGG | - | chr5_3:4698824-4698843 | Msa0792890:intron | 50.0% | |
| GTATTCCTGACAAGGGTGGT+AGG | - | chr5_3:4698828-4698847 | Msa0792890:intron | 50.0% | |
| TTTGTCCTACCACCCTTGTC+AGG | + | chr5_3:4698836-4698855 | None:intergenic | 50.0% | |
| ! | TTGGTAACCTCCATTCCCCA+AGG | + | chr5_3:4699235-4699254 | None:intergenic | 50.0% |
| GCCCCGAATGTGGCAATATT+CGG | + | chr5_3:4699258-4699277 | None:intergenic | 50.0% | |
| AAACTGATCAGCCCCGAATG+TGG | + | chr5_3:4699268-4699287 | None:intergenic | 50.0% | |
| GATGAAGGAATGTGGGCTCT+TGG | - | chr5_3:4699399-4699418 | Msa0792890:intron | 50.0% | |
| TACCGACATTTCAAGCCCAG+TGG | - | chr5_3:4699486-4699505 | Msa0792890:intron | 50.0% | |
| TGCCACTGGGCTTGAAATGT+CGG | + | chr5_3:4699491-4699510 | None:intergenic | 50.0% | |
| AACAAGGACTTGGCAGAACC+TGG | + | chr5_3:4699523-4699542 | None:intergenic | 50.0% | |
| CTTACTTGAACCCGTCTGTG+TGG | + | chr5_3:4699647-4699666 | None:intergenic | 50.0% | |
| TTACAGGACAGAGACGCCAT+GGG | + | chr5_3:4699940-4699959 | None:intergenic | 50.0% | |
| TGGTGCAGAGCCAAATTGGA+AGG | + | chr5_3:4699997-4700016 | None:intergenic | 50.0% | |
| AAGCAAGACATGCTAGCTGG+TGG | + | chr5_3:4700109-4700128 | None:intergenic | 50.0% | |
| ! | GTCCGACTCTAAGGGACTTA+CGG | - | chr5_3:4700204-4700223 | Msa0792890:intron | 50.0% |
| CTCCGTAAGTCCCTTAGAGT+CGG | + | chr5_3:4700209-4700228 | None:intergenic | 50.0% | |
| GAGCTTCAGAGAATGGGAGT+TGG | - | chr5_3:4700226-4700245 | Msa0792890:intron | 50.0% | |
| AAGTACTCGAGCCTTTGCAG+TGG | + | chr5_3:4700333-4700352 | None:intergenic | 50.0% | |
| CGCAAAGAGAATGATGAGCC+AGG | - | chr5_3:4700703-4700722 | Msa0792890:intron | 50.0% | |
| ! | ATAACCCACTTGCGTTGGCC+TGG | - | chr5_3:4697791-4697810 | Msa0792890:intron | 55.0% |
| ! | TTGCGTTGGCCTGGTGGTAT+TGG | - | chr5_3:4697800-4697819 | Msa0792890:intron | 55.0% |
| GGTCCCAAACCAATACCACC+AGG | + | chr5_3:4697812-4697831 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGTTTGGGACC+TGG | - | chr5_3:4697812-4697831 | Msa0792890:intron | 55.0% |
| CGGGATTGGAGTGAACCTAG+TGG | - | chr5_3:4698806-4698825 | Msa0792890:intron | 55.0% | |
| CTCATTGCCTTGGGGAATGG+AGG | - | chr5_3:4699225-4699244 | Msa0792890:intron | 55.0% | |
| !! | GTTTGACGAGGAGCACTCGA+AGG | - | chr5_3:4699284-4699303 | Msa0792890:intron | 55.0% |
| GAATGTGGGCTCTTGGCTTC+TGG | - | chr5_3:4699406-4699425 | Msa0792890:intron | 55.0% | |
| CTTGGCAGAACCTGGCAAGA+GGG | + | chr5_3:4699515-4699534 | None:intergenic | 55.0% | |
| ACTTGGCAGAACCTGGCAAG+AGG | + | chr5_3:4699516-4699535 | None:intergenic | 55.0% | |
| ACTTGAACCCGTCTGTGTGG+AGG | + | chr5_3:4699644-4699663 | None:intergenic | 55.0% | |
| CTTACAGGACAGAGACGCCA+TGG | + | chr5_3:4699941-4699960 | None:intergenic | 55.0% | |
| TACTCGAGCCTTTGCAGTGG+CGG | + | chr5_3:4700330-4700349 | None:intergenic | 55.0% | |
| CTCTACGGAGGATCACATGC+CGG | - | chr5_3:4700546-4700565 | Msa0792890:intron | 55.0% | |
| TCTACGGAGGATCACATGCC+GGG | - | chr5_3:4700547-4700566 | Msa0792890:intron | 55.0% | |
| AGGTTTACTGGGATCCACCC+CGG | + | chr5_3:4700568-4700587 | None:intergenic | 55.0% | |
| TCGATGTCAAGGCGGCTAAG+AGG | + | chr5_3:4700621-4700640 | None:intergenic | 55.0% | |
| CTTAGCCGCCTTGACATCGA+TGG | - | chr5_3:4700621-4700640 | Msa0792890:intron | 55.0% | |
| ACCACCAGGCCAACGCAAGT+GGG | + | chr5_3:4697798-4697817 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACGCAAG+TGG | + | chr5_3:4697799-4697818 | None:intergenic | 60.0% | |
| ! | CTCAAGAGGAGCACACTCCC+AGG | + | chr5_3:4697833-4697852 | None:intergenic | 60.0% |
| ! | CTGGGAGTGTGCTCCTCTTG+AGG | - | chr5_3:4697831-4697850 | Msa0792890:intron | 60.0% |
| CGGGGCTGATCAGTTTGACG+AGG | - | chr5_3:4699272-4699291 | Msa0792890:intron | 60.0% | |
| !! | TGACGAGGAGCACTCGAAGG+AGG | - | chr5_3:4699287-4699306 | Msa0792890:intron | 60.0% |
| !! | GACGAGGAGCACTCGAAGGA+GGG | - | chr5_3:4699288-4699307 | Msa0792890:intron | 60.0% |
| ! | CTTGGCTTCTGGCTGTCTGC+AGG | - | chr5_3:4699417-4699436 | Msa0792890:intron | 60.0% |
| CTGGCAAGAGGGTTGCCACT+GGG | + | chr5_3:4699504-4699523 | None:intergenic | 60.0% | |
| GGTTGGAACAGGCGCCTTTC+TGG | + | chr5_3:4699919-4699938 | None:intergenic | 60.0% | |
| ! | AAGGCGCCTGTTCCAACCCA+TGG | - | chr5_3:4699921-4699940 | Msa0792890:intron | 60.0% |
| !! | GAGACGCCATGGGTTGGAAC+AGG | + | chr5_3:4699930-4699949 | None:intergenic | 60.0% |
| AGGACAGAGACGCCATGGGT+TGG | + | chr5_3:4699936-4699955 | None:intergenic | 60.0% | |
| CTTTGCAGTGGCGGCAGTCT+TGG | + | chr5_3:4700321-4700340 | None:intergenic | 60.0% | |
| CAAGACTGCCGCCACTGCAA+AGG | - | chr5_3:4700319-4700338 | Msa0792890:intron | 60.0% | |
| CTACGGAGGATCACATGCCG+GGG | - | chr5_3:4700548-4700567 | Msa0792890:intron | 60.0% | |
| ! | ACCCACTTGCGTTGGCCTGG+TGG | - | chr5_3:4697794-4697813 | Msa0792890:intron | 65.0% |
| CCTGGCAAGAGGGTTGCCAC+TGG | + | chr5_3:4699505-4699524 | None:intergenic | 65.0% | |
| CCAGTGGCAACCCTCTTGCC+AGG | - | chr5_3:4699502-4699521 | Msa0792890:intron | 65.0% | |
| CGGAGGATCACATGCCGGGG+TGG | - | chr5_3:4700551-4700570 | Msa0792890:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 4695352 | 4700741 | 4695352 | ID=Msa0792890;Name=Msa0792890 |
| chr5_3 | mRNA | 4695352 | 4700741 | 4695352 | ID=Msa0792890-mRNA-1;Parent=Msa0792890;Name=Msa0792890-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.25|0|1|0.75|0.8|5|0|605 |
| chr5_3 | exon | 4700709 | 4700741 | 4700709 | ID=Msa0792890-mRNA-1:exon:1855;Parent=Msa0792890-mRNA-1 |
| chr5_3 | exon | 4700341 | 4700473 | 4700341 | ID=Msa0792890-mRNA-1:exon:1854;Parent=Msa0792890-mRNA-1 |
| chr5_3 | exon | 4697101 | 4697318 | 4697101 | ID=Msa0792890-mRNA-1:exon:1853;Parent=Msa0792890-mRNA-1 |
| chr5_3 | exon | 4696432 | 4696994 | 4696432 | ID=Msa0792890-mRNA-1:exon:1852;Parent=Msa0792890-mRNA-1 |
| chr5_3 | exon | 4695352 | 4696222 | 4695352 | ID=Msa0792890-mRNA-1:exon:1851;Parent=Msa0792890-mRNA-1 |
| chr5_3 | CDS | 4700709 | 4700741 | 4700709 | ID=Msa0792890-mRNA-1:cds;Parent=Msa0792890-mRNA-1 |
| chr5_3 | CDS | 4700341 | 4700473 | 4700341 | ID=Msa0792890-mRNA-1:cds;Parent=Msa0792890-mRNA-1 |
| chr5_3 | CDS | 4697101 | 4697318 | 4697101 | ID=Msa0792890-mRNA-1:cds;Parent=Msa0792890-mRNA-1 |
| chr5_3 | CDS | 4696432 | 4696994 | 4696432 | ID=Msa0792890-mRNA-1:cds;Parent=Msa0792890-mRNA-1 |
| chr5_3 | CDS | 4695352 | 4696222 | 4695352 | ID=Msa0792890-mRNA-1:cds;Parent=Msa0792890-mRNA-1 |
| Gene Sequence |
| Protein sequence |
