AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0433090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433090 MtrunA17_Chr3g0138671 97.792 634 4 1 1 634 1 624 0.0 1277
Msa0433090 MtrunA17_Chr4g0063141 50.203 492 237 4 20 509 23 508 1.91e-165 496
Msa0433090 MtrunA17_Chr8g0356081 41.282 671 331 10 23 634 20 686 5.82e-162 480
Msa0433090 MtrunA17_Chr2g0277651 45.437 504 266 5 17 519 39 534 4.07e-145 441
Msa0433090 MtrunA17_Chr1g0148981 42.442 516 233 6 39 496 48 557 5.57e-131 409
Msa0433090 MtrunA17_Chr3g0138131 49.081 381 185 4 40 417 59 433 8.31e-121 367
Msa0433090 MtrunA17_Chr2g0286031 50.538 372 172 2 131 502 21 380 1.44e-116 363
Msa0433090 MtrunA17_Chr5g0434371 36.152 473 283 9 40 502 78 541 8.39e-91 299
Msa0433090 MtrunA17_Chr4g0063071 28.846 260 172 4 269 519 5 260 3.92e-29 116
Msa0433090 MtrunA17_Chr2g0286041 46.903 113 59 1 13 125 21 132 1.94e-27 107
Msa0433090 MtrunA17_Chr4g0062561 27.650 217 149 3 79 295 4 212 9.01e-19 90.9
Msa0433090 MtrunA17_Chr4g0062571 28.571 217 142 4 79 295 4 207 1.65e-18 85.1
Msa0433090 MtrunA17_Chr4g0001481 25.123 203 149 2 243 442 380 582 2.39e-16 83.2
Msa0433090 MtrunA17_Chr4g0073941 21.996 491 292 15 39 442 91 577 2.57e-16 82.8
Msa0433090 MtrunA17_Chr4g0063081 31.694 183 115 4 56 234 3 179 7.66e-15 73.6
Msa0433090 MtrunA17_Chr8g0347121 23.153 203 153 2 243 442 337 539 6.39e-14 75.1
Msa0433090 MtrunA17_Chr1g0158861 21.145 454 280 14 92 472 143 591 7.77e-14 75.1
Msa0433090 MtrunA17_Chr1g0181121 22.831 219 165 3 241 455 314 532 2.92e-13 73.2
Msa0433090 MtrunA17_Chr4g0028861 22.120 217 165 3 243 455 396 612 2.66e-12 70.1
Msa0433090 MtrunA17_Chr7g0275581 25.980 204 146 3 243 442 358 560 5.15e-12 68.9
Msa0433090 MtrunA17_Chr3g0125651 22.167 203 155 2 243 442 315 517 9.53e-12 68.2
Msa0433090 MtrunA17_Chr3g0126541 22.059 204 154 3 243 442 353 555 1.07e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433090 AT4G32650.3 59.048 630 243 7 8 633 42 660 0.0 704
Msa0433090 AT4G32650.1 58.216 639 235 8 8 633 42 661 0.0 703
Msa0433090 AT4G32650.2 59.567 554 212 4 8 551 42 593 0.0 642
Msa0433090 AT5G46240.1 42.057 661 330 8 15 632 23 673 3.56e-166 491
Msa0433090 AT2G26650.1 44.580 572 276 8 20 559 26 588 1.22e-161 485
Msa0433090 AT4G18290.1 49.068 483 242 3 21 503 29 507 6.46e-150 450
Msa0433090 AT4G18290.2 49.068 483 242 3 21 503 40 518 8.57e-150 450
Msa0433090 AT4G32500.1 45.674 497 260 4 20 511 43 534 1.03e-146 447
Msa0433090 AT2G25600.1 45.766 496 259 5 20 511 47 536 5.57e-145 443
Msa0433090 AT4G22200.2 45.248 484 260 5 17 498 39 519 1.35e-135 410
Msa0433090 AT4G22200.1 45.436 482 258 5 17 496 39 517 1.72e-133 410
Msa0433090 AT2G26650.2 44.444 486 231 7 101 584 1 449 1.43e-131 404
Msa0433090 AT3G02850.3 35.667 457 277 7 44 491 74 522 1.27e-92 298
Msa0433090 AT3G02850.2 35.667 457 277 7 44 491 74 522 1.60e-91 299
Msa0433090 AT3G02850.1 35.667 457 277 7 44 491 74 522 5.49e-91 300
Msa0433090 AT5G37500.4 35.730 459 278 7 42 491 55 505 1.19e-88 291
Msa0433090 AT5G37500.1 35.730 459 278 7 42 491 55 505 4.95e-88 291
Msa0433090 AT5G37500.2 35.730 459 278 7 42 491 55 505 8.69e-88 291
Msa0433090 AT5G37500.3 35.477 451 274 7 50 491 9 451 7.26e-85 282
Msa0433090 AT1G19780.2 24.390 205 152 2 241 442 164 368 2.39e-15 79.7
Msa0433090 AT1G19780.1 24.390 205 152 2 241 442 375 579 4.04e-15 79.7
Msa0433090 AT1G15990.1 23.902 205 153 2 241 442 369 573 9.88e-15 78.2
Msa0433090 AT5G57940.3 23.645 203 152 2 243 442 360 562 1.03e-13 75.1
Msa0433090 AT5G57940.1 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa0433090 AT5G57940.2 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa0433090 AT2G46430.1 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa0433090 AT2G46430.2 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa0433090 AT4G30560.5 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0433090 AT4G30560.2 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0433090 AT4G30560.3 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa0433090 AT4G30560.1 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa0433090 AT4G30560.4 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa0433090 AT2G23980.6 22.439 205 156 2 241 442 354 558 5.94e-12 69.3
Msa0433090 AT2G23980.9 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0433090 AT2G23980.10 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0433090 AT2G23980.1 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0433090 AT2G23980.4 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0433090 AT2G23980.5 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa0433090 AT2G23980.3 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0433090 AT2G23980.2 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0433090 AT2G23980.8 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0433090 AT2G23980.7 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa0433090 AT5G53130.1 21.296 216 162 3 230 442 347 557 3.59e-11 67.0
Msa0433090 AT1G01340.1 23.039 204 152 3 243 442 337 539 7.05e-11 65.9
Msa0433090 AT1G01340.2 23.267 202 150 3 245 442 344 544 7.65e-11 65.9

Find 138 sgRNAs with CRISPR-Local

Find 482 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGCATATTTCTACATTT+TGG 0.153780 3_2:-85392423 Msa0433090:CDS
CTTCCCAATCCACGTGTTTC+CGG 0.184950 3_2:+85394249 None:intergenic
GCCTTCCCATCTTCATTAAA+TGG 0.195859 3_2:+85391518 Msa0433080:intron
ATAACTCATCGTCCTCTCTT+AGG 0.208567 3_2:+85388956 Msa0433080:intron
AGATTGTAATTGTCTCTATT+TGG 0.212418 3_2:+85388914 Msa0433080:intron
CTTCTACTTCTCACTGTATA+AGG 0.266754 3_2:+85391593 Msa0433080:intron
CCCAACGAAAACATTGAAAA+TGG 0.273238 3_2:-85389358 Msa0433090:CDS
CTGTATGCAGAGAACAAGTT+TGG 0.290869 3_2:-85389036 Msa0433090:intron
CAGTTTATGAAGGGCCTAAA+AGG 0.301144 3_2:-85391189 Msa0433090:CDS
GACGTTCAAGCGGCGAAATA+AGG 0.317410 3_2:-85395989 Msa0433090:CDS
ATTTGGTCCTTCAAACCTTC+TGG 0.317911 3_2:+85392762 None:intergenic
GACATTCTTTGTGGCTTACT+TGG 0.330293 3_2:-85395627 Msa0433090:CDS
TTCCCAATCCACGTGTTTCC+GGG 0.336300 3_2:+85394250 None:intergenic
GTACCTATATCTGCGATCAT+AGG 0.339717 3_2:+85395875 None:intergenic
TTAAGGTTACCTTCTTCATA+TGG 0.341526 3_2:+85390224 Msa0433080:intron
CACGACAGAGGGGAAGTCTT+TGG 0.343113 3_2:-85394705 Msa0433090:CDS
GGAAGCATGGTAGGAGAAAT+AGG 0.351752 3_2:-85391638 Msa0433090:CDS
AACAGAATTTCTGAGTGATT+TGG 0.351877 3_2:-85391139 Msa0433090:CDS
ATTTCTCCTACCATGCTTCC+AGG 0.352995 3_2:+85391641 Msa0433080:intron
CCGTACAATCCACAGGATTA+AGG 0.353518 3_2:+85390207 Msa0433080:intron
GGGCCTAAAAGGCGGGGTGC+TGG 0.361204 3_2:-85391178 Msa0433090:CDS
CATAATCCTGACATTCTTTG+TGG 0.363443 3_2:-85395636 Msa0433090:CDS
ACCTGATAGCAATCTTCTTA+TGG 0.365107 3_2:+85395576 None:intergenic
AAAAGATCTTCGACTGAATC+TGG 0.370035 3_2:+85389310 Msa0433080:intron
GCTTTCAGAGAGATGTCAAT+TGG 0.377539 3_2:-85395707 Msa0433090:CDS
ATACCGGCTCTAATTGCTTT+AGG 0.395979 3_2:+85392672 None:intergenic
GTGAAACCATTTAATGAAGA+TGG 0.396083 3_2:-85391524 Msa0433090:CDS
AAGAGGAAGCAAAATTCTTA+TGG 0.402959 3_2:-85389010 Msa0433090:CDS
CTTCTCACTGTATAAGGTTG+TGG 0.405620 3_2:+85391599 Msa0433080:intron
TTTGGTCCTTCAAACCTTCT+GGG 0.406751 3_2:+85392763 None:intergenic
GGCCTCACTGCATATATTAT+CGG 0.406985 3_2:-85394070 Msa0433090:CDS
TTTAAAGAATGGGTCTGAAC+AGG 0.414172 3_2:-85392285 Msa0433090:intron
AGTTGGTATATCTGCTGAAA+TGG 0.417497 3_2:+85394744 None:intergenic
CACCCGGAAACACGTGGATT+GGG 0.429696 3_2:-85394252 Msa0433090:CDS
AGGTCGAAGTAACCTTCATC+AGG 0.430867 3_2:+85395918 None:intergenic
TCACCCGGAAACACGTGGAT+TGG 0.431953 3_2:-85394253 Msa0433090:CDS
TAACTCATCGTCCTCTCTTA+GGG 0.435806 3_2:+85388957 Msa0433080:intron
AAACACGTGGATTGGGAAGC+AGG 0.440143 3_2:-85394245 Msa0433090:CDS
CTCCCTATGATCGCAGATAT+AGG 0.444080 3_2:-85395878 Msa0433090:intron
GCTGTGTATGTGCCAACATT+TGG 0.448804 3_2:+85392745 None:intergenic
TTATTCTACTCAGTTTATGA+AGG 0.454225 3_2:-85391199 Msa0433090:intron
TATCGGAAACATGACAAATC+TGG 0.454837 3_2:-85394053 Msa0433090:CDS
GATGATCGATTCGTATAAGC+TGG 0.455732 3_2:+85391564 Msa0433080:intron
ACCATAAGAAGATTGCTATC+AGG 0.463306 3_2:-85395577 Msa0433090:intron
CTCCATAGCCAACAGTGGTA+AGG 0.464281 3_2:+85394155 None:intergenic
GAAAAGATGCTGAGCAATAC+CGG 0.467875 3_2:+85392656 None:intergenic
TTATGAAGGGCCTAAAAGGC+GGG 0.476754 3_2:-85391185 Msa0433090:CDS
TTCTGAACATGCTTAGACTC+TGG 0.476763 3_2:-85394680 Msa0433090:CDS
TACCTATATCTGCGATCATA+GGG 0.482588 3_2:+85395876 None:intergenic
TTCTCACTGTATAAGGTTGT+GGG 0.485398 3_2:+85391600 Msa0433080:intron
TTTGGCACTAATCCTGATGA+AGG 0.487192 3_2:-85395930 Msa0433090:CDS
CTATTTGCAGTGCATTTCAC+AGG 0.490090 3_2:-85394310 Msa0433090:CDS
CTTTCAGAGAGATGTCAATT+GGG 0.493184 3_2:-85395706 Msa0433090:CDS
TCATCATCATTTCAAGCAGC+TGG 0.493382 3_2:-85391546 Msa0433090:CDS
ATTGTAACCCTTACCACTGT+TGG 0.494420 3_2:-85394163 Msa0433090:CDS
ACCAAAATGTAGAAATATGC+CGG 0.496163 3_2:+85392422 None:intergenic
TGCTTAGACTCTGGCGATTG+AGG 0.497213 3_2:-85394671 Msa0433090:CDS
CGGCTCTAATTGCTTTAGGC+AGG 0.497294 3_2:+85392676 None:intergenic
ACCCTTACCACTGTTGGCTA+TGG 0.497731 3_2:-85394157 Msa0433090:CDS
AGTAAGCCACAAAGAATGTC+AGG 0.501626 3_2:+85395630 None:intergenic
AGCAAAATTCTTATGGCTGA+TGG 0.505553 3_2:-85389003 Msa0433090:CDS
GATTATGTCAAATGCAAAGA+AGG 0.505830 3_2:+85395652 None:intergenic
CAAACATTTATTCTTCCCCA+TGG 0.507553 3_2:-85394784 Msa0433090:CDS
AAGCATAGGAGTGTCGGATC+GGG 0.514286 3_2:-85394211 Msa0433090:CDS
ACAGGCTAGAGAAAGACATC+AGG 0.515409 3_2:-85394488 Msa0433090:intron
ACAGCAAGAAGAAGTGCTAC+AGG 0.515890 3_2:-85392700 Msa0433090:CDS
TGGACTCCCAGAAGGTTTGA+AGG 0.517610 3_2:-85392769 Msa0433090:CDS
CCTTAATCCTGTGGATTGTA+CGG 0.517898 3_2:-85390207 Msa0433090:CDS
AAATTTATTTAAAGGAGTCT+CGG 0.522060 3_2:-85392613 Msa0433090:CDS
TAAAAGACTGCTAGAAATTG+AGG 0.525967 3_2:+85395959 None:intergenic
AAGCGGCGAAATAAGGAACT+TGG 0.532471 3_2:-85395982 Msa0433090:CDS
CTAGATCCTGGAAGCATGGT+AGG 0.533447 3_2:-85391647 Msa0433090:CDS
GAAGAAAATCCATATGAAGA+AGG 0.533805 3_2:-85390233 Msa0433090:CDS
GCAAACGTTCCTAGTGGTAT+TGG 0.536240 3_2:-85395765 Msa0433090:CDS
TGAAACCATTTAATGAAGAT+GGG 0.540227 3_2:-85391523 Msa0433090:CDS
CAGATATACCAACTTATAGC+AGG 0.540823 3_2:-85394735 Msa0433090:CDS
CATCTTGCAAAATGAGATGC+CGG 0.542003 3_2:-85392441 Msa0433090:CDS
AAGATGATGTCAACCTTTGA+CGG 0.542979 3_2:+85392458 None:intergenic
GTGGATTGGGAAGCAGGTAG+AGG 0.543328 3_2:-85394239 Msa0433090:CDS
ACCATTTAATGAAGATGGGA+AGG 0.544586 3_2:-85391519 Msa0433090:CDS
TCCATAGCCAACAGTGGTAA+GGG 0.545277 3_2:+85394156 None:intergenic
AACGTTCCTAGTGGTATTGG+TGG 0.546659 3_2:-85395762 Msa0433090:CDS
GACTAGGCTTGACAGTGGAC+TGG 0.551907 3_2:+85389411 Msa0433080:intron
TATTCTACTCAGTTTATGAA+GGG 0.552678 3_2:-85391198 Msa0433090:intron
CTCAGAAATTCTGTTACATA+CGG 0.553507 3_2:+85391147 Msa0433080:intron
TGTTTCCGGGTGATTTGTGA+TGG 0.553957 3_2:+85394263 None:intergenic
CAGGCAAATCACACGACAGA+GGG 0.557635 3_2:-85394716 Msa0433090:CDS
TAAGCATAGGAGTGTCGGAT+CGG 0.559099 3_2:-85394212 Msa0433090:CDS
TCCACGAACCTGAGTAAAGT+TGG 0.560743 3_2:+85391487 Msa0433080:intron
TCAGGATTAGTGCCAAATGC+TGG 0.561152 3_2:+85395936 None:intergenic
AGAGTGGAAGCTAGATCCAT+GGG 0.562419 3_2:+85394768 None:intergenic
TCTGGTAGGATAATGAGCTT+TGG 0.563514 3_2:+85389328 Msa0433080:intron
GCAGCATCCGACACAAAATG+AGG 0.564454 3_2:-85390285 Msa0433090:intron
TCTCTGAAAGCTAACTCGAA+TGG 0.564788 3_2:+85395719 None:intergenic
TATTGGTGGTGTACTCAGCA+TGG 0.565665 3_2:-85395748 Msa0433090:CDS
GAACGTCTTCTAACTAGAGA+TGG 0.577143 3_2:+85396005 None:intergenic
GTTACACTTACTCCATGTAC+TGG 0.577805 3_2:-85394189 Msa0433090:CDS
AATTATCACCAACTTTACTC+AGG 0.579672 3_2:-85391495 Msa0433090:intron
CAGAGTGGAAGCTAGATCCA+TGG 0.582011 3_2:+85394767 None:intergenic
AGATGATGTCAACCTTTGAC+GGG 0.585146 3_2:+85392459 None:intergenic
TCTTCTTATGGTCATCAACA+AGG 0.589359 3_2:+85395588 None:intergenic
CAAACTAGATCCTGGAAGCA+TGG 0.592017 3_2:-85391651 Msa0433090:CDS
ATTGGTGGTGTACTCAGCAT+GGG 0.592623 3_2:-85395747 Msa0433090:CDS
AGATCTATGCGCCCTAAGAG+AGG 0.595067 3_2:-85388968 Msa0433090:CDS
CTGCCTAAAGCAATTAGAGC+CGG 0.596573 3_2:-85392675 Msa0433090:CDS
GATCTTCGACTGAATCTGGT+AGG 0.597089 3_2:+85389314 Msa0433080:intron
ATGATCGATTCGTATAAGCT+GGG 0.597906 3_2:+85391565 Msa0433080:intron
GCTTTCCATCACAAATCACC+CGG 0.601397 3_2:-85394268 Msa0433090:CDS
CTCTGTCAGAACCTTTGCCA+TGG 0.604556 3_2:-85394020 Msa0433090:intron
TTTCGTTGGGGTGATGTCCG+TGG 0.604677 3_2:+85389371 Msa0433080:intron
TTTATGAAGGGCCTAAAAGG+CGG 0.604730 3_2:-85391186 Msa0433090:CDS
TGCAGAAAATACAACGGAGA+AGG 0.604909 3_2:-85394125 Msa0433090:CDS
AGCAGAATACTACCCGTCAA+AGG 0.606939 3_2:-85392471 Msa0433090:CDS
AGGTTTGAAGGACCAAATGT+TGG 0.607435 3_2:-85392757 Msa0433090:CDS
GTGATTTGCCTGCTATAAGT+TGG 0.611642 3_2:+85394727 None:intergenic
TTACTGACCGTACAATCCAC+AGG 0.616689 3_2:+85390200 Msa0433080:intron
AACAAGATCAGCAATCAACA+TGG 0.622158 3_2:+85395682 None:intergenic
GGTTACAATAGACCAGTACA+TGG 0.630208 3_2:+85394177 None:intergenic
AGAAGGTAACCTTAATCCTG+TGG 0.632695 3_2:-85390216 Msa0433090:CDS
CGGAAACATGACAAATCTGG+TGG 0.634913 3_2:-85394050 Msa0433090:CDS
GTGTTAGTGAGCTCTTCTCA+AGG 0.639360 3_2:-85394647 Msa0433090:intron
TCTGAGTGATTTGGAAGACG+AGG 0.639686 3_2:-85391130 Msa0433090:intron
CAGCATCCGACACAAAATGA+GGG 0.640928 3_2:-85390284 Msa0433090:CDS
CCGATTAGAGTCAAAATCCA+CGG 0.641853 3_2:-85389388 Msa0433090:CDS
TATGAAGGGCCTAAAAGGCG+GGG 0.644259 3_2:-85391184 Msa0433090:CDS
ACAAATCACCCGGAAACACG+TGG 0.645837 3_2:-85394258 Msa0433090:CDS
CTAGTTAGAAGACGTTCAAG+CGG 0.648284 3_2:-85395999 Msa0433090:CDS
AGTACACCACCAATACCACT+AGG 0.675337 3_2:+85395756 None:intergenic
CAGGCTAGAGAAAGACATCA+GGG 0.679388 3_2:-85394487 Msa0433090:CDS
GCAGGCAAATCACACGACAG+AGG 0.680984 3_2:-85394717 Msa0433090:CDS
TAAATCTCCATAGCCAACAG+TGG 0.683311 3_2:+85394150 None:intergenic
TTTACATGCAGAAAATACAA+CGG 0.691098 3_2:-85394131 Msa0433090:CDS
TATCTGCTGAAATGGCAGAG+TGG 0.713852 3_2:+85394752 None:intergenic
ATTGTGGCAAACGTTCCTAG+TGG 0.719275 3_2:-85395771 Msa0433090:CDS
ATCGGGACTAGGCTTGACAG+TGG 0.726298 3_2:+85389406 Msa0433080:intron
AGGCAAATCACACGACAGAG+GGG 0.735317 3_2:-85394715 Msa0433090:CDS
TTCCGATAATATATGCAGTG+AGG 0.738037 3_2:+85394068 None:intergenic
GAGTGGAAGCTAGATCCATG+GGG 0.775567 3_2:+85394769 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAATAATTGTATTA+AGG + chr3_2:85389024-85389043 Msa0433080:intron 10.0%
!!! ATCAATAGTATTAAAATTTT+CGG + chr3_2:85389486-85389505 Msa0433080:intron 10.0%
!! GAAAAAACAAATTTATTTAA+AGG - chr3_2:85392236-85392255 Msa0433090:intron 10.0%
!!! AAACAGATTTATTTTAATTT+TGG - chr3_2:85394492-85394511 Msa0433090:intron 10.0%
!!! GAAAATTTTAATACTATTGA+TGG - chr3_2:85389485-85389504 Msa0433090:intron 15.0%
!! AAAAAAAAAAAACTACCAAA+GGG + chr3_2:85389535-85389554 Msa0433080:intron 15.0%
!! AAAAAAAAAAAAACTACCAA+AGG + chr3_2:85389536-85389555 Msa0433080:intron 15.0%
!! AAACTTAAATTCATTTCTTT+AGG - chr3_2:85390250-85390269 Msa0433090:CDS 15.0%
!!! AATTTTTTGAAGATTTTTCA+TGG - chr3_2:85390862-85390881 Msa0433090:intron 15.0%
!!! CGTTTTTAATATAAGAAATT+AGG + chr3_2:85391386-85391405 Msa0433080:intron 15.0%
!!! ATATTGTAATATTTTGTTGA+AGG + chr3_2:85392057-85392076 Msa0433080:three_prime_UTR 15.0%
!! TTATTATAATTTCTGAACTA+TGG - chr3_2:85392804-85392823 Msa0433090:CDS 15.0%
!! AAATACTTTGTATAAAACAT+TGG + chr3_2:85393117-85393136 None:intergenic 15.0%
!! AACATTAATATAGAAAGATA+TGG + chr3_2:85393629-85393648 None:intergenic 15.0%
!! AATAGAATATATAAGTATCA+TGG - chr3_2:85394250-85394269 Msa0433090:CDS 15.0%
!!! AAAAAATTAAAGACGTTTTA+CGG - chr3_2:85394426-85394445 Msa0433090:intron 15.0%
!! TTAAACAAAAAGTTATTAAG+TGG + chr3_2:85394915-85394934 None:intergenic 15.0%
!!! TTTTTGTGCATTTATATATT+AGG + chr3_2:85395400-85395419 None:intergenic 15.0%
!!! GAGCAATAACATATTTTTTT+AGG + chr3_2:85388962-85388981 Msa0433080:intron 20.0%
!! AAAAAAAAAAACTACCAAAG+GGG + chr3_2:85389534-85389553 Msa0433080:intron 20.0%
!! TTATCTATACCAATATACAA+AGG - chr3_2:85389588-85389607 Msa0433090:intron 20.0%
!! TATCTATACCAATATACAAA+GGG - chr3_2:85389589-85389608 Msa0433090:intron 20.0%
!!! TACTTTCAGTTTTGTTTAAT+TGG - chr3_2:85389971-85389990 Msa0433090:intron 20.0%
!!! GATTATTGAGTTTTCATAAT+AGG - chr3_2:85390045-85390064 Msa0433090:intron 20.0%
!!! ATTTCTTTAGGATATTTTTG+TGG - chr3_2:85390262-85390281 Msa0433090:CDS 20.0%
!!! TTTCTTTAGGATATTTTTGT+GGG - chr3_2:85390263-85390282 Msa0433090:CDS 20.0%
!!! ATTTGATGGTATATCTTATT+TGG + chr3_2:85390469-85390488 Msa0433080:intron 20.0%
!!! TTTTATATGCTGTTTAACAT+CGG - chr3_2:85390766-85390785 Msa0433090:intron 20.0%
!! AATCTTCAAAAAATTTACCA+TGG + chr3_2:85390857-85390876 Msa0433080:intron 20.0%
!! AAATCTAATCTACTTTAATC+TGG - chr3_2:85391092-85391111 Msa0433090:intron 20.0%
!!! TAGTTTTTTAGTTTGTTTTC+CGG + chr3_2:85391141-85391160 Msa0433080:intron 20.0%
!! AAAGTTATGAAAGAATTTCA+CGG + chr3_2:85391541-85391560 Msa0433080:intron 20.0%
!! AATAACTTCGATATTTCAAT+TGG + chr3_2:85391651-85391670 Msa0433080:intron 20.0%
!! TAGGGAAATAAAAATGTTAA+GGG - chr3_2:85391853-85391872 Msa0433090:intron 20.0%
!! AAATTAAGCAAATCTACTAT+TGG + chr3_2:85391903-85391922 Msa0433080:intron 20.0%
!! AAATTTATTTAAAGGAGTCT+CGG - chr3_2:85392244-85392263 Msa0433090:intron 20.0%
!!! ATGTGTTGATTTTAAAGAAT+GGG - chr3_2:85392562-85392581 Msa0433090:intron 20.0%
!! CTTGTATATTTAGAAATTTC+AGG + chr3_2:85393513-85393532 None:intergenic 20.0%
!! CTGAAATTTCTAAATATACA+AGG - chr3_2:85393511-85393530 Msa0433090:intron 20.0%
!!! TATTGGTGATTGAAATTTAA+AGG + chr3_2:85393763-85393782 None:intergenic 20.0%
!! ATTGTATATAAGTTTGTCTA+AGG + chr3_2:85393935-85393954 None:intergenic 20.0%
!! AATACATATATTAACATCTC+AGG - chr3_2:85394219-85394238 Msa0433090:CDS 20.0%
!! ATACATATATTAACATCTCA+GGG - chr3_2:85394220-85394239 Msa0433090:CDS 20.0%
!! AATCATGTGATATTACTAAA+TGG - chr3_2:85394961-85394980 Msa0433090:intron 20.0%
!! ATTTATATATTAGGTAAGCA+GGG + chr3_2:85395391-85395410 None:intergenic 20.0%
! ATCTATACCAATATACAAAG+GGG - chr3_2:85389590-85389609 Msa0433090:intron 25.0%
! GTACAAAATATTGAAGTGAA+GGG + chr3_2:85389758-85389777 Msa0433080:intron 25.0%
! TTTAATCAAGTATTCGTTGT+TGG - chr3_2:85389845-85389864 Msa0433090:intron 25.0%
!!! TATTTGGTGTCAAGATAAAA+GGG + chr3_2:85389914-85389933 Msa0433080:intron 25.0%
! ACAAAACTGAAAGTAAATCT+AGG + chr3_2:85389966-85389985 Msa0433080:intron 25.0%
! CAATAATCATGAGAAAATAG+AGG + chr3_2:85390033-85390052 Msa0433080:intron 25.0%
! GTTTAGTTACAAGTTACAAA+TGG + chr3_2:85390335-85390354 Msa0433080:intron 25.0%
! ACCATCAAATTGTCTAATTT+AGG - chr3_2:85390479-85390498 Msa0433090:intron 25.0%
! ACCTAAATTAGACAATTTGA+TGG + chr3_2:85390483-85390502 Msa0433080:intron 25.0%
! TTTACATGCAGAAAATACAA+CGG - chr3_2:85390726-85390745 Msa0433090:intron 25.0%
!!! ATTTTTGAGATACTTACAGT+GGG + chr3_2:85391042-85391061 Msa0433080:intron 25.0%
!!! TATTTTTGAGATACTTACAG+TGG + chr3_2:85391043-85391062 Msa0433080:intron 25.0%
!! TTCTAGTATATTTGTTGCAA+TGG + chr3_2:85391166-85391185 Msa0433080:intron 25.0%
! ATACTACAAAGGAGTAAAAA+AGG - chr3_2:85391212-85391231 Msa0433090:intron 25.0%
! TACTACAAAGGAGTAAAAAA+GGG - chr3_2:85391213-85391232 Msa0433090:intron 25.0%
! AAAAACTTAGAGTTAGGAAA+TGG + chr3_2:85391288-85391307 Msa0433080:intron 25.0%
! TAGCATAAAAACTTAGAGTT+AGG + chr3_2:85391294-85391313 Msa0433080:intron 25.0%
! TTCTTATATTAAAAACGCCA+AGG - chr3_2:85391389-85391408 Msa0433090:intron 25.0%
! TTTGAGTAAAAAGAGAACTT+AGG + chr3_2:85391580-85391599 Msa0433080:intron 25.0%
!! TTTCAATTGGTGAATTTTGA+GGG + chr3_2:85391638-85391657 Msa0433080:intron 25.0%
!! ATTTCAATTGGTGAATTTTG+AGG + chr3_2:85391639-85391658 Msa0433080:intron 25.0%
! GTAGGGAAATAAAAATGTTA+AGG - chr3_2:85391852-85391871 Msa0433090:intron 25.0%
!! AAAAATGTTAAGGGTTTTTC+AGG - chr3_2:85391862-85391881 Msa0433090:intron 25.0%
! TATAATTATATGCTTCACAG+AGG - chr3_2:85392027-85392046 Msa0433090:intron 25.0%
! ATAATTATATGCTTCACAGA+GGG - chr3_2:85392028-85392047 Msa0433090:intron 25.0%
!! AAAAAGAAGTTTTACCATCT+GGG + chr3_2:85392282-85392301 Msa0433080:three_prime_UTR 25.0%
!! AAAAAAGAAGTTTTACCATC+TGG + chr3_2:85392283-85392302 Msa0433080:three_prime_UTR 25.0%
!!! TATTTCTACATTTTGGTATC+TGG - chr3_2:85392441-85392460 Msa0433090:CDS 25.0%
!!! GATGTGTTGATTTTAAAGAA+TGG - chr3_2:85392561-85392580 Msa0433090:intron 25.0%
!!! AATATGTTTTGAAGTTATGC+AGG + chr3_2:85392852-85392871 None:intergenic 25.0%
! ATCTTAATCAGACAAGTAAA+TGG - chr3_2:85393016-85393035 Msa0433090:intron 25.0%
! TGAAACCATTTAATGAAGAT+GGG - chr3_2:85393334-85393353 Msa0433090:intron 25.0%
! AGAAATTTCAGGAAAAATGT+GGG + chr3_2:85393502-85393521 None:intergenic 25.0%
! TAGAAATTTCAGGAAAAATG+TGG + chr3_2:85393503-85393522 None:intergenic 25.0%
! TTATTCTACTCAGTTTATGA+AGG - chr3_2:85393658-85393677 Msa0433090:intron 25.0%
! TATTCTACTCAGTTTATGAA+GGG - chr3_2:85393659-85393678 Msa0433090:intron 25.0%
! GTGATTGAAATTTAAAGGAA+AGG + chr3_2:85393758-85393777 None:intergenic 25.0%
! AAAAGATGCAAAAAAATCCA+TGG - chr3_2:85393880-85393899 Msa0433090:intron 25.0%
!!! TAAAGTCTTTATTTTCTGGA+GGG + chr3_2:85394462-85394481 None:intergenic 25.0%
!!! ATAAAGTCTTTATTTTCTGG+AGG + chr3_2:85394463-85394482 None:intergenic 25.0%
! TCCAGAAAATAAAGACTTTA+TGG - chr3_2:85394462-85394481 Msa0433090:CDS 25.0%
! ATTTATGAGCATGATTATGA+GGG - chr3_2:85394780-85394799 Msa0433090:CDS 25.0%
!! TTAAAGTTGTTGTAAGTTGA+CGG + chr3_2:85394873-85394892 None:intergenic 25.0%
! ATGACAGTAATATATTGCTA+TGG - chr3_2:85395242-85395261 Msa0433090:intron 25.0%
! CATTTATATATTAGGTAAGC+AGG + chr3_2:85395392-85395411 None:intergenic 25.0%
! TAATCCAAAGATAGAAATAG+AGG - chr3_2:85395677-85395696 Msa0433090:CDS 25.0%
! AATCCAAAGATAGAAATAGA+GGG - chr3_2:85395678-85395697 Msa0433090:CDS 25.0%
! AGATTGTAATTGTCTCTATT+TGG + chr3_2:85395946-85395965 None:intergenic 25.0%
TAAAAGACTGCTAGAAATTG+AGG + chr3_2:85388901-85388920 Msa0433080:intron 30.0%
CAAGTTTGTGATATAGATTG+TGG - chr3_2:85389070-85389089 Msa0433090:intron 30.0%
GATTATGTCAAATGCAAAGA+AGG + chr3_2:85389208-85389227 Msa0433080:intron 30.0%
GTATAGATAACAACTACCAA+GGG + chr3_2:85389578-85389597 Msa0433080:intron 30.0%
!!! ACTTTTGGGTTGGATTTTTT+CGG - chr3_2:85389622-85389641 Msa0433090:intron 30.0%
CAATATTGCTTCTATTGTTG+TGG + chr3_2:85389657-85389676 Msa0433080:intron 30.0%
CACAACAATAGAAGCAATAT+TGG - chr3_2:85389655-85389674 Msa0433090:intron 30.0%
GGTACAAAATATTGAAGTGA+AGG + chr3_2:85389759-85389778 Msa0433080:intron 30.0%
! TTGTACCATTTTATCGTTCA+TGG - chr3_2:85389772-85389791 Msa0433090:intron 30.0%
ATTGTCCATGAACGATAAAA+TGG + chr3_2:85389780-85389799 Msa0433080:intron 30.0%
TCGTTCATGGACAATAAAAA+TGG - chr3_2:85389785-85389804 Msa0433090:intron 30.0%
AGTTTGTATGTCTTCATTCT+TGG - chr3_2:85389869-85389888 Msa0433090:intron 30.0%
!! ATTTGGTGTCAAGATAAAAG+GGG + chr3_2:85389913-85389932 Msa0433080:intron 30.0%
!! CTATTTGGTGTCAAGATAAA+AGG + chr3_2:85389915-85389934 Msa0433080:intron 30.0%
!! ATTTTGAGCTTCACTTTTGT+TGG - chr3_2:85390508-85390527 Msa0433090:intron 30.0%
!!! CACTTTTGTTGGTTTATCAT+AGG - chr3_2:85390519-85390538 Msa0433090:intron 30.0%
CAAAAAATTTACCATGGCAA+AGG + chr3_2:85390851-85390870 Msa0433080:intron 30.0%
!!! ATAGTTTTATGTCTTCCTAG+TGG - chr3_2:85390933-85390952 Msa0433090:intron 30.0%
TAAAGGAAGAAAACACAGTA+AGG - chr3_2:85390960-85390979 Msa0433090:intron 30.0%
CTAATCTACTTTAATCTGGT+TGG - chr3_2:85391096-85391115 Msa0433090:intron 30.0%
!! TACTTTAATCTGGTTGGTAA+GGG - chr3_2:85391102-85391121 Msa0433090:intron 30.0%
TAAGGGAACAAATTAACATC+CGG - chr3_2:85391119-85391138 Msa0433090:intron 30.0%
CTAGAAACTTAAGACTTGAT+TGG - chr3_2:85391180-85391199 Msa0433090:CDS 30.0%
GGTTATAAGTGATACTACAA+AGG - chr3_2:85391201-85391220 Msa0433090:intron 30.0%
ACTACAAAGGAGTAAAAAAG+GGG - chr3_2:85391214-85391233 Msa0433090:intron 30.0%
TGAAAGTTGACTAGGATATA+GGG + chr3_2:85391428-85391447 Msa0433080:intron 30.0%
CTGCATTCAAATCTCTATTA+TGG - chr3_2:85391454-85391473 Msa0433090:intron 30.0%
TTTGAAGAGAGAATTCTGTT+GGG + chr3_2:85391687-85391706 Msa0433080:intron 30.0%
TACTCTATTAACATATTCGG+AGG + chr3_2:85391835-85391854 Msa0433080:intron 30.0%
TCCGAATATGTTAATAGAGT+AGG - chr3_2:85391834-85391853 Msa0433090:intron 30.0%
CCCTACTCTATTAACATATT+CGG + chr3_2:85391838-85391857 Msa0433080:intron 30.0%
CCGAATATGTTAATAGAGTA+GGG - chr3_2:85391835-85391854 Msa0433090:intron 30.0%
TTACAATATGCGAGCAAAAA+TGG - chr3_2:85392068-85392087 Msa0433090:intron 30.0%
!!! TTGTTTTTTCAACTACGTTG+TGG + chr3_2:85392226-85392245 Msa0433080:three_prime_UTR 30.0%
ACCAAAATGTAGAAATATGC+CGG + chr3_2:85392438-85392457 None:intergenic 30.0%
! TCTGAAATCAATTGTCTGTT+TGG + chr3_2:85392609-85392628 None:intergenic 30.0%
TTAGTATCTGTTGTCTAAGT+GGG + chr3_2:85392745-85392764 None:intergenic 30.0%
TTTAGTATCTGTTGTCTAAG+TGG + chr3_2:85392746-85392765 None:intergenic 30.0%
AATTTCTGAACTATGGAGAT+CGG - chr3_2:85392811-85392830 Msa0433090:CDS 30.0%
! ACTAGGAACAATACATTTTG+AGG - chr3_2:85393069-85393088 Msa0433090:intron 30.0%
! CTAGGAACAATACATTTTGA+GGG - chr3_2:85393070-85393089 Msa0433090:intron 30.0%
! TTTTTGTTCAAACTAGATCC+TGG - chr3_2:85393198-85393217 Msa0433090:intron 30.0%
GTGAAACCATTTAATGAAGA+TGG - chr3_2:85393333-85393352 Msa0433090:intron 30.0%
AATTATCACCAACTTTACTC+AGG - chr3_2:85393362-85393381 Msa0433090:intron 30.0%
CAAATGTGTATTTGTGTTTG+TGG + chr3_2:85393422-85393441 None:intergenic 30.0%
GAAATTTCAGGAAAAATGTG+GGG + chr3_2:85393501-85393520 None:intergenic 30.0%
!!! TCATATTTTTGAGGTCTTTG+TGG + chr3_2:85393570-85393589 None:intergenic 30.0%
!! GGAATTTGGTCATATTTTTG+AGG + chr3_2:85393579-85393598 None:intergenic 30.0%
AAGTTTGTATGAAGGGAATT+TGG + chr3_2:85393593-85393612 None:intergenic 30.0%
TATAGAAAGATATGGACTTG+TGG + chr3_2:85393621-85393640 None:intergenic 30.0%
CTCAGAAATTCTGTTACATA+CGG + chr3_2:85393713-85393732 None:intergenic 30.0%
AACAGAATTTCTGAGTGATT+TGG - chr3_2:85393718-85393737 Msa0433090:intron 30.0%
!!! TTTTTTGCCAAGAAGAGTAT+TGG + chr3_2:85393780-85393799 None:intergenic 30.0%
TATGCGATGTTTAATATCCA+TGG + chr3_2:85393900-85393919 None:intergenic 30.0%
! TTTGTCTAAGGTTTAGCTAT+GGG + chr3_2:85393923-85393942 None:intergenic 30.0%
ACAATTAGTACTTTAGTGTG+TGG - chr3_2:85393950-85393969 Msa0433090:intron 30.0%
CAATTAGTACTTTAGTGTGT+GGG - chr3_2:85393951-85393970 Msa0433090:intron 30.0%
! CAGGAATAACTTTTTACTTC+TGG + chr3_2:85393990-85394009 None:intergenic 30.0%
! AAAACATGGTTTAAAGCTGA+TGG + chr3_2:85394036-85394055 None:intergenic 30.0%
!!! TTAAACCATGTTTTGAGGAA+AGG - chr3_2:85394042-85394061 Msa0433090:CDS 30.0%
!!! TAAACCATGTTTTGAGGAAA+GGG - chr3_2:85394043-85394062 Msa0433090:CDS 30.0%
! TTCTTTTATCCTTCACTTCT+TGG + chr3_2:85394071-85394090 None:intergenic 30.0%
TAACAATGTGTGTGTATACA+TGG - chr3_2:85394300-85394319 Msa0433090:CDS 30.0%
!!! GCGTAACATTTTTTTCTTTC+TGG + chr3_2:85394399-85394418 None:intergenic 30.0%
! AAATTAAAGACGTTTTACGG+TGG - chr3_2:85394429-85394448 Msa0433090:intron 30.0%
!!! GCCATAAAGTCTTTATTTTC+TGG + chr3_2:85394466-85394485 None:intergenic 30.0%
AAATAAAGACTTTATGGCAC+AGG - chr3_2:85394468-85394487 Msa0433090:CDS 30.0%
TTTGTACAGATGTAAATGTG+TGG + chr3_2:85394518-85394537 None:intergenic 30.0%
! CTTCATATGGATTTTCTTCA+TGG + chr3_2:85394623-85394642 None:intergenic 30.0%
GAAGAAAATCCATATGAAGA+AGG - chr3_2:85394624-85394643 Msa0433090:intron 30.0%
TTAAGGTTACCTTCTTCATA+TGG + chr3_2:85394636-85394655 None:intergenic 30.0%
GATGATAACACTAAATGAGT+GGG - chr3_2:85394682-85394701 Msa0433090:CDS 30.0%
TCATGCTCATAAATCTTTCT+GGG + chr3_2:85394774-85394793 None:intergenic 30.0%
ATCATGCTCATAAATCTTTC+TGG + chr3_2:85394775-85394794 None:intergenic 30.0%
GATTTATGAGCATGATTATG+AGG - chr3_2:85394779-85394798 Msa0433090:CDS 30.0%
! AATTTGAGATTGCCATTCAA+AGG - chr3_2:85394831-85394850 Msa0433090:intron 30.0%
GGATATAATCAAATGGTACT+AGG + chr3_2:85395008-85395027 None:intergenic 30.0%
TTGGTAGGGATATAATCAAA+TGG + chr3_2:85395015-85395034 None:intergenic 30.0%
TTAACACTAACACTTACACT+TGG + chr3_2:85395034-85395053 None:intergenic 30.0%
AGTAATATATTGCTATGGCA+AGG - chr3_2:85395247-85395266 Msa0433090:intron 30.0%
ACACTGAAGAAAAAAAACCT+AGG + chr3_2:85395276-85395295 None:intergenic 30.0%
ATGCACAAAAAAATTAACGC+AGG - chr3_2:85395409-85395428 Msa0433090:intron 30.0%
! CATTTTCAATGTTTTCGTTG+GGG + chr3_2:85395501-85395520 None:intergenic 30.0%
! CCATTTTCAATGTTTTCGTT+GGG + chr3_2:85395502-85395521 None:intergenic 30.0%
! TCCATTTTCAATGTTTTCGT+TGG + chr3_2:85395503-85395522 None:intergenic 30.0%
! GAAACTACTCAGAATCTTTT+GGG + chr3_2:85395624-85395643 None:intergenic 30.0%
! TGAAACTACTCAGAATCTTT+TGG + chr3_2:85395625-85395644 None:intergenic 30.0%
AAAGATTCTGAGTAGTTTCA+CGG - chr3_2:85395625-85395644 Msa0433090:CDS 30.0%
ATCCAAAGATAGAAATAGAG+GGG - chr3_2:85395679-85395698 Msa0433090:CDS 30.0%
GGTGGAATTAAAATGAAGAA+GGG + chr3_2:85395730-85395749 None:intergenic 30.0%
!!! TTTTTATTATGAAGCGCTGT+GGG + chr3_2:85395751-85395770 None:intergenic 30.0%
!!! ATTTTTATTATGAAGCGCTG+TGG + chr3_2:85395752-85395771 None:intergenic 30.0%
TATTCTTGCATTCATAGTTG+TGG - chr3_2:85395795-85395814 Msa0433090:intron 30.0%
AAGAGGAAGCAAAATTCTTA+TGG - chr3_2:85395847-85395866 Msa0433090:intron 30.0%
TAAAGTAAGAAAAACACGCA+TGG - chr3_2:85395997-85396016 Msa0433090:CDS 30.0%
TACCTATATCTGCGATCATA+GGG + chr3_2:85388984-85389003 Msa0433080:intron 35.0%
CTTTCAGAGAGATGTCAATT+GGG - chr3_2:85389151-85389170 Msa0433090:intron 35.0%
AACAAGATCAGCAATCAACA+TGG + chr3_2:85389178-85389197 Msa0433080:intron 35.0%
CATAATCCTGACATTCTTTG+TGG - chr3_2:85389221-85389240 Msa0433090:intron 35.0%
TCTTCTTATGGTCATCAACA+AGG + chr3_2:85389272-85389291 Msa0433080:intron 35.0%
ACCATAAGAAGATTGCTATC+AGG - chr3_2:85389280-85389299 Msa0433090:intron 35.0%
ACCTGATAGCAATCTTCTTA+TGG + chr3_2:85389284-85389303 Msa0433080:intron 35.0%
CCATACTTTCTACATCAACA+CGG - chr3_2:85389313-85389332 Msa0433090:CDS 35.0%
TTAGTCTCAACGATTCCAAA+GGG + chr3_2:85389428-85389447 Msa0433080:intron 35.0%
! ATTAGTCTCAACGATTCCAA+AGG + chr3_2:85389429-85389448 Msa0433080:intron 35.0%
! GTTGAGACTAATCATTGACT+CGG - chr3_2:85389437-85389456 Msa0433090:intron 35.0%
TGTTGACAAAATGTTACCCT+TGG - chr3_2:85389559-85389578 Msa0433090:intron 35.0%
GGTATAGATAACAACTACCA+AGG + chr3_2:85389579-85389598 Msa0433080:intron 35.0%
GATGAATCCCCTTTGTATAT+TGG + chr3_2:85389600-85389619 Msa0433080:intron 35.0%
! AAGGGGATTCATCAAACTTT+TGG - chr3_2:85389607-85389626 Msa0433090:intron 35.0%
! AGGGGATTCATCAAACTTTT+GGG - chr3_2:85389608-85389627 Msa0433090:intron 35.0%
!! GATTCATCAAACTTTTGGGT+TGG - chr3_2:85389612-85389631 Msa0433090:intron 35.0%
!! TTTGGTGTCAAGATAAAAGG+GGG + chr3_2:85389912-85389931 Msa0433080:intron 35.0%
GACAGAGTGAAGTAACTATT+TGG + chr3_2:85389930-85389949 Msa0433080:intron 35.0%
CAAACATTTATTCTTCCCCA+TGG - chr3_2:85390073-85390092 Msa0433090:intron 35.0%
! AGTTGGTATATCTGCTGAAA+TGG + chr3_2:85390116-85390135 Msa0433080:intron 35.0%
CAGATATACCAACTTATAGC+AGG - chr3_2:85390122-85390141 Msa0433090:intron 35.0%
! AGGTAGAGGATTTTAAGCAT+AGG - chr3_2:85390632-85390651 Msa0433090:intron 35.0%
!! GATTTTAAGCATAGGAGTGT+CGG - chr3_2:85390640-85390659 Msa0433090:intron 35.0%
TTCCGATAATATATGCAGTG+AGG + chr3_2:85390792-85390811 Msa0433080:intron 35.0%
TATCGGAAACATGACAAATC+TGG - chr3_2:85390804-85390823 Msa0433090:intron 35.0%
AGAATGCAATGCTAAGTCAA+GGG + chr3_2:85390896-85390915 Msa0433080:intron 35.0%
TAGAATGCAATGCTAAGTCA+AGG + chr3_2:85390897-85390916 Msa0433080:intron 35.0%
! TTCTTCCTTTAACTTCCACT+AGG + chr3_2:85390951-85390970 Msa0433080:intron 35.0%
! CTACTTTAATCTGGTTGGTA+AGG - chr3_2:85391101-85391120 Msa0433090:intron 35.0%
ATATAGTATTTACCACCTCC+AGG - chr3_2:85391260-85391279 Msa0433090:intron 35.0%
TGCTATTAAGTTTGTCAAGC+AGG - chr3_2:85391309-85391328 Msa0433090:intron 35.0%
GCTATTAAGTTTGTCAAGCA+GGG - chr3_2:85391310-85391329 Msa0433090:intron 35.0%
CTGAAAGTTGACTAGGATAT+AGG + chr3_2:85391429-85391448 Msa0433080:intron 35.0%
AGTTAAGCTGAAAGTTGACT+AGG + chr3_2:85391436-85391455 Msa0433080:intron 35.0%
TTGAAGAGAGAATTCTGTTG+GGG + chr3_2:85391686-85391705 Msa0433080:intron 35.0%
GTTTGAAGAGAGAATTCTGT+TGG + chr3_2:85391688-85391707 Msa0433080:intron 35.0%
! GGATGATTTTATATCCCAGA+TGG - chr3_2:85392265-85392284 Msa0433090:intron 35.0%
AAGATGATGTCAACCTTTGA+CGG + chr3_2:85392402-85392421 None:intergenic 35.0%
TACAGTTCATACTCTAGTAC+TGG - chr3_2:85392496-85392515 Msa0433090:intron 35.0%
ACTAAACCATTTCTAATCGC+AGG - chr3_2:85392539-85392558 Msa0433090:intron 35.0%
TTTAAAGAATGGGTCTGAAC+AGG - chr3_2:85392572-85392591 Msa0433090:intron 35.0%
AAACATATTGCATCAACCTG+AGG - chr3_2:85392863-85392882 Msa0433090:intron 35.0%
GTCTGATTAAGATGTTCTCT+AGG + chr3_2:85393009-85393028 None:intergenic 35.0%
AGACAAGTAAATGGAACAGA+AGG - chr3_2:85393025-85393044 Msa0433090:intron 35.0%
TATTTGTGCCTCTTAGCTAA+TGG - chr3_2:85393132-85393151 Msa0433090:intron 35.0%
TATGAGCTTAGCAATGCAAT+GGG + chr3_2:85393165-85393184 None:intergenic 35.0%
TTATGAGCTTAGCAATGCAA+TGG + chr3_2:85393166-85393185 None:intergenic 35.0%
TTCTCACTGTATAAGGTTGT+GGG + chr3_2:85393260-85393279 None:intergenic 35.0%
CTTCTACTTCTCACTGTATA+AGG + chr3_2:85393267-85393286 None:intergenic 35.0%
!! ATGATCGATTCGTATAAGCT+GGG + chr3_2:85393295-85393314 None:intergenic 35.0%
ACCATTTAATGAAGATGGGA+AGG - chr3_2:85393338-85393357 Msa0433090:intron 35.0%
GGACATGAAGTTTGTATGAA+GGG + chr3_2:85393600-85393619 None:intergenic 35.0%
TGGACATGAAGTTTGTATGA+AGG + chr3_2:85393601-85393620 None:intergenic 35.0%
TCAATCACCAATACTCTTCT+TGG - chr3_2:85393770-85393789 Msa0433090:intron 35.0%
! GTTTGTCTAAGGTTTAGCTA+TGG + chr3_2:85393924-85393943 None:intergenic 35.0%
!!! CCAAGATCTTTTGGAATTTC+AGG + chr3_2:85394009-85394028 None:intergenic 35.0%
CCTGAAATTCCAAAAGATCT+TGG - chr3_2:85394006-85394025 Msa0433090:intron 35.0%
! GATGGATAACCAAGATCTTT+TGG + chr3_2:85394018-85394037 None:intergenic 35.0%
!!! CAGCTTTAAACCATGTTTTG+AGG - chr3_2:85394037-85394056 Msa0433090:CDS 35.0%
!!! AAACCATGTTTTGAGGAAAG+GGG - chr3_2:85394044-85394063 Msa0433090:CDS 35.0%
ATTCTTTCGTTCAAAGGAAG+TGG + chr3_2:85394192-85394211 None:intergenic 35.0%
TTCACGATTCTTTCGTTCAA+AGG + chr3_2:85394198-85394217 None:intergenic 35.0%
ATGTAAACCATTGCGAGAAT+TGG + chr3_2:85394277-85394296 None:intergenic 35.0%
GGATGATAACACTAAATGAG+TGG - chr3_2:85394681-85394700 Msa0433090:CDS 35.0%
AAGAACCAGTTGACATTCAA+GGG - chr3_2:85394731-85394750 Msa0433090:CDS 35.0%
ACATGATTACACGATCAGAT+TGG + chr3_2:85394949-85394968 None:intergenic 35.0%
ACTAACACTTACACTTGGTA+GGG + chr3_2:85395029-85395048 None:intergenic 35.0%
!!! GCTGCTTTTTTGAATAAACC+AGG + chr3_2:85395126-85395145 None:intergenic 35.0%
AACTAAGATTGCAATCAAGC+TGG + chr3_2:85395199-85395218 None:intergenic 35.0%
! TTACTGTCATCTAGAGTTTG+AGG + chr3_2:85395232-85395251 None:intergenic 35.0%
! CATATCAAGTTGTGACACTA+CGG + chr3_2:85395309-85395328 None:intergenic 35.0%
CCCAACGAAAACATTGAAAA+TGG - chr3_2:85395499-85395518 Msa0433090:intron 35.0%
AAAAGATCTTCGACTGAATC+TGG + chr3_2:85395550-85395569 None:intergenic 35.0%
TCCAAAGATAGAAATAGAGG+GGG - chr3_2:85395680-85395699 Msa0433090:CDS 35.0%
GGGTGGAATTAAAATGAAGA+AGG + chr3_2:85395731-85395750 None:intergenic 35.0%
GAGAACAAGTTTGGAAAAAG+AGG - chr3_2:85395830-85395849 Msa0433090:intron 35.0%
AGCAAAATTCTTATGGCTGA+TGG - chr3_2:85395854-85395873 Msa0433090:intron 35.0%
GAACGTCTTCTAACTAGAGA+TGG + chr3_2:85388855-85388874 Msa0433080:intron 40.0%
CTAGTTAGAAGACGTTCAAG+CGG - chr3_2:85388858-85388877 Msa0433090:three_prime_UTR 40.0%
! AGCAGTCTTTTACCAGCATT+TGG - chr3_2:85388909-85388928 Msa0433090:three_prime_UTR 40.0%
TTTGGCACTAATCCTGATGA+AGG - chr3_2:85388927-85388946 Msa0433090:exon 40.0%
GTACCTATATCTGCGATCAT+AGG + chr3_2:85388985-85389004 Msa0433080:intron 40.0%
AACTTGTCATTACACAGCAC+AGG + chr3_2:85389056-85389075 Msa0433080:intron 40.0%
! TCTCTGAAAGCTAACTCGAA+TGG + chr3_2:85389141-85389160 Msa0433080:intron 40.0%
GCTTTCAGAGAGATGTCAAT+TGG - chr3_2:85389150-85389169 Msa0433090:intron 40.0%
AGTAAGCCACAAAGAATGTC+AGG + chr3_2:85389230-85389249 Msa0433080:intron 40.0%
GACATTCTTTGTGGCTTACT+TGG - chr3_2:85389230-85389249 Msa0433090:intron 40.0%
! CCGTGTTGATGTAGAAAGTA+TGG + chr3_2:85389316-85389335 Msa0433080:intron 40.0%
AATGACAACCCACCGTAATT+AGG - chr3_2:85389354-85389373 Msa0433090:CDS 40.0%
ATGACAACCCACCGTAATTA+GGG - chr3_2:85389355-85389374 Msa0433090:CDS 40.0%
GGATCAAAAGGCCCTAATTA+CGG + chr3_2:85389369-85389388 Msa0433080:intron 40.0%
!! ACTAATCATTGACTCGGCAA+TGG - chr3_2:85389443-85389462 Msa0433090:intron 40.0%
!! CTAATCATTGACTCGGCAAT+GGG - chr3_2:85389444-85389463 Msa0433090:intron 40.0%
! TAGTTGATGTGTTACCCCTT+TGG - chr3_2:85389517-85389536 Msa0433090:intron 40.0%
TATGACTACTCGCGTAAAGA+CGG + chr3_2:85389814-85389833 Msa0433080:intron 40.0%
AAAGGGGGTAGACAACAAAA+CGG + chr3_2:85389897-85389916 Msa0433080:intron 40.0%
! GTGATTTGCCTGCTATAAGT+TGG + chr3_2:85390133-85390152 Msa0433080:intron 40.0%
TTCTGAACATGCTTAGACTC+TGG - chr3_2:85390177-85390196 Msa0433090:intron 40.0%
AAACCTGCTAACTGTCTTAC+AGG - chr3_2:85390351-85390370 Msa0433090:intron 40.0%
CTATTTGCAGTGCATTTCAC+AGG - chr3_2:85390547-85390566 Msa0433090:intron 40.0%
GTTACACTTACTCCATGTAC+TGG - chr3_2:85390668-85390687 Msa0433090:intron 40.0%
GGTTACAATAGACCAGTACA+TGG + chr3_2:85390683-85390702 Msa0433080:intron 40.0%
ATTGTAACCCTTACCACTGT+TGG - chr3_2:85390694-85390713 Msa0433090:intron 40.0%
TAAATCTCCATAGCCAACAG+TGG + chr3_2:85390710-85390729 Msa0433080:intron 40.0%
TGCAGAAAATACAACGGAGA+AGG - chr3_2:85390732-85390751 Msa0433090:intron 40.0%
GGCCTCACTGCATATATTAT+CGG - chr3_2:85390787-85390806 Msa0433090:intron 40.0%
GTCTTCCTAGTGGAAGTTAA+AGG - chr3_2:85390943-85390962 Msa0433090:intron 40.0%
TACTTACAGTGGGAGAATGT+CGG + chr3_2:85391032-85391051 Msa0433080:intron 40.0%
GGGAAAGAAGATGTAGATCT+AGG - chr3_2:85391234-85391253 Msa0433090:intron 40.0%
! TTAGGTCTAAGAAGCATGTC+TGG + chr3_2:85391368-85391387 Msa0433080:intron 40.0%
AGGGATATTTGCTCAAACCT+TGG + chr3_2:85391409-85391428 Msa0433080:intron 40.0%
TTTGGTCCTTCAAACCTTCT+GGG + chr3_2:85392097-85392116 Msa0433080:three_prime_UTR 40.0%
ATTTGGTCCTTCAAACCTTC+TGG + chr3_2:85392098-85392117 Msa0433080:three_prime_UTR 40.0%
AGGTTTGAAGGACCAAATGT+TGG - chr3_2:85392100-85392119 Msa0433090:intron 40.0%
!! ATACCGGCTCTAATTGCTTT+AGG + chr3_2:85392188-85392207 Msa0433080:three_prime_UTR 40.0%
GAAAAGATGCTGAGCAATAC+CGG + chr3_2:85392204-85392223 Msa0433080:three_prime_UTR 40.0%
ATCTGATACCTGTGTAGTGA+TGG + chr3_2:85392361-85392380 None:intergenic 40.0%
AGATGATGTCAACCTTTGAC+GGG + chr3_2:85392401-85392420 None:intergenic 40.0%
CATCTTGCAAAATGAGATGC+CGG - chr3_2:85392416-85392435 Msa0433090:CDS 40.0%
!! GCCGGCATATTTCTACATTT+TGG - chr3_2:85392434-85392453 Msa0433090:CDS 40.0%
!! CATTTTGGTATCTGGATCAG+TGG - chr3_2:85392449-85392468 Msa0433090:CDS 40.0%
ACACATCCTGCGATTAGAAA+TGG + chr3_2:85392548-85392567 None:intergenic 40.0%
TTTGATGTGTTTGCTTCAGC+AGG + chr3_2:85392962-85392981 None:intergenic 40.0%
GCTAGGTAGTAAGAGATACT+AGG - chr3_2:85393052-85393071 Msa0433090:intron 40.0%
GAGAATTGCCATTAGCTAAG+AGG + chr3_2:85393143-85393162 None:intergenic 40.0%
CTTCTCACTGTATAAGGTTG+TGG + chr3_2:85393261-85393280 None:intergenic 40.0%
!! GATGATCGATTCGTATAAGC+TGG + chr3_2:85393296-85393315 None:intergenic 40.0%
TCATCATCATTTCAAGCAGC+TGG - chr3_2:85393311-85393330 Msa0433090:intron 40.0%
GCCTTCCCATCTTCATTAAA+TGG + chr3_2:85393342-85393361 None:intergenic 40.0%
CAGGAAAAATGTGGGGATTT+GGG + chr3_2:85393494-85393513 None:intergenic 40.0%
TCAGGAAAAATGTGGGGATT+TGG + chr3_2:85393495-85393514 None:intergenic 40.0%
! TTGTGGCTTGCAAGGATATT+TGG + chr3_2:85393553-85393572 None:intergenic 40.0%
CAGTTTATGAAGGGCCTAAA+AGG - chr3_2:85393668-85393687 Msa0433090:intron 40.0%
TTTATGAAGGGCCTAAAAGG+CGG - chr3_2:85393671-85393690 Msa0433090:intron 40.0%
AGTGTGTGGGAGAAAGATAA+CGG - chr3_2:85393964-85393983 Msa0433090:intron 40.0%
AATGTCCTGTTTGGGAGAAA+GGG + chr3_2:85394143-85394162 None:intergenic 40.0%
GTGACATGAATGTCCTGTTT+GGG + chr3_2:85394151-85394170 None:intergenic 40.0%
TCATGTCACCTAATGATGCA+TGG - chr3_2:85394162-85394181 Msa0433090:CDS 40.0%
GTGGTTATCCATGCATCATT+AGG + chr3_2:85394173-85394192 None:intergenic 40.0%
! TTTGTGCCCTCATTTTGTGT+CGG + chr3_2:85394582-85394601 None:intergenic 40.0%
AGAAGGTAACCTTAATCCTG+TGG - chr3_2:85394641-85394660 Msa0433090:intron 40.0%
! CCTTAATCCTGTGGATTGTA+CGG - chr3_2:85394650-85394669 Msa0433090:CDS 40.0%
TGAGTGGGTAGATATTGTGT+AGG - chr3_2:85394697-85394716 Msa0433090:CDS 40.0%
CAAGAACCAGTTGACATTCA+AGG - chr3_2:85394730-85394749 Msa0433090:CDS 40.0%
TTCAAGGGTTCTGCTAAACA+CGG - chr3_2:85394746-85394765 Msa0433090:CDS 40.0%
ACACAAAGTCTGCCTTTGAA+TGG + chr3_2:85394846-85394865 None:intergenic 40.0%
CACTAACACTTACACTTGGT+AGG + chr3_2:85395030-85395049 None:intergenic 40.0%
AAGATATGTCATGTGTCACG+TGG - chr3_2:85395053-85395072 Msa0433090:intron 40.0%
AGATATGTCATGTGTCACGT+GGG - chr3_2:85395054-85395073 Msa0433090:intron 40.0%
AAGATTGCCCCATGATAAAG+AGG - chr3_2:85395088-85395107 Msa0433090:intron 40.0%
TGTTGTGCCTCTTTATCATG+GGG + chr3_2:85395098-85395117 None:intergenic 40.0%
GTGTTGTGCCTCTTTATCAT+GGG + chr3_2:85395099-85395118 None:intergenic 40.0%
AGTGTTGTGCCTCTTTATCA+TGG + chr3_2:85395100-85395119 None:intergenic 40.0%
! TTTTAAGCATGAGCACAGCA+AGG + chr3_2:85395152-85395171 None:intergenic 40.0%
CGTAGTGTCACAACTTGATA+TGG - chr3_2:85395307-85395326 Msa0433090:intron 40.0%
!! TTTTGACTCTAATCGGGACT+AGG + chr3_2:85395465-85395484 None:intergenic 40.0%
!!! CGTGGATTTTGACTCTAATC+GGG + chr3_2:85395471-85395490 None:intergenic 40.0%
!!! CCGTGGATTTTGACTCTAAT+CGG + chr3_2:85395472-85395491 None:intergenic 40.0%
CCGATTAGAGTCAAAATCCA+CGG - chr3_2:85395469-85395488 Msa0433090:intron 40.0%
TCTGGTAGGATAATGAGCTT+TGG + chr3_2:85395532-85395551 None:intergenic 40.0%
! GAAGATCTTTTCAGAGTAGC+AGG - chr3_2:85395559-85395578 Msa0433090:intron 40.0%
! TCTTTTCAGAGTAGCAGGTA+TGG - chr3_2:85395564-85395583 Msa0433090:intron 40.0%
! CTTTTCAGAGTAGCAGGTAT+GGG - chr3_2:85395565-85395584 Msa0433090:intron 40.0%
CCAAAGATAGAAATAGAGGG+GGG - chr3_2:85395681-85395700 Msa0433090:CDS 40.0%
CAAAGATAGAAATAGAGGGG+GGG - chr3_2:85395682-85395701 Msa0433090:CDS 40.0%
AAAGATAGAAATAGAGGGGG+GGG - chr3_2:85395683-85395702 Msa0433090:CDS 40.0%
CTGTATGCAGAGAACAAGTT+TGG - chr3_2:85395821-85395840 Msa0433090:intron 40.0%
TAACTCATCGTCCTCTCTTA+GGG + chr3_2:85395903-85395922 None:intergenic 40.0%
ATAACTCATCGTCCTCTCTT+AGG + chr3_2:85395904-85395923 None:intergenic 40.0%
AAGCGGCGAAATAAGGAACT+TGG - chr3_2:85388875-85388894 Msa0433090:three_prime_UTR 45.0%
! TCAGGATTAGTGCCAAATGC+TGG + chr3_2:85388924-85388943 Msa0433080:intron 45.0%
AGGTCGAAGTAACCTTCATC+AGG + chr3_2:85388942-85388961 Msa0433080:intron 45.0%
CTCCCTATGATCGCAGATAT+AGG - chr3_2:85388979-85388998 Msa0433090:CDS 45.0%
ATTGTGGCAAACGTTCCTAG+TGG - chr3_2:85389086-85389105 Msa0433090:intron 45.0%
GCAAACGTTCCTAGTGGTAT+TGG - chr3_2:85389092-85389111 Msa0433090:intron 45.0%
! AACGTTCCTAGTGGTATTGG+TGG - chr3_2:85389095-85389114 Msa0433090:intron 45.0%
AGTACACCACCAATACCACT+AGG + chr3_2:85389104-85389123 Msa0433080:intron 45.0%
!! TATTGGTGGTGTACTCAGCA+TGG - chr3_2:85389109-85389128 Msa0433090:intron 45.0%
!! ATTGGTGGTGTACTCAGCAT+GGG - chr3_2:85389110-85389129 Msa0433090:intron 45.0%
CAAAAGGCCCTAATTACGGT+GGG + chr3_2:85389365-85389384 Msa0433080:intron 45.0%
TCAAAAGGCCCTAATTACGG+TGG + chr3_2:85389366-85389385 Msa0433080:intron 45.0%
ATACCTTGTGGCACCTAGTT+GGG + chr3_2:85389390-85389409 Msa0433080:intron 45.0%
AATACCTTGTGGCACCTAGT+TGG + chr3_2:85389391-85389410 Msa0433080:intron 45.0%
AAGCCATGGTCAATACCTTG+TGG + chr3_2:85389402-85389421 Msa0433080:intron 45.0%
ATTCCAAAGGGTCTAAGCCA+TGG + chr3_2:85389416-85389435 Msa0433080:intron 45.0%
AGAGTGGAAGCTAGATCCAT+GGG + chr3_2:85390092-85390111 Msa0433080:intron 45.0%
TATCTGCTGAAATGGCAGAG+TGG + chr3_2:85390108-85390127 Msa0433080:intron 45.0%
GTGTTAGTGAGCTCTTCTCA+AGG - chr3_2:85390210-85390229 Msa0433090:CDS 45.0%
ATGGCAGAACATGTGCGAAA+TGG + chr3_2:85390316-85390335 Msa0433080:intron 45.0%
TAGCCTGTAAGACAGTTAGC+AGG + chr3_2:85390357-85390376 Msa0433080:intron 45.0%
ACAGGCTAGAGAAAGACATC+AGG - chr3_2:85390369-85390388 Msa0433090:intron 45.0%
CAGGCTAGAGAAAGACATCA+GGG - chr3_2:85390370-85390389 Msa0433090:intron 45.0%
! TCACAGGCTGCGTGTATTTT+TGG - chr3_2:85390563-85390582 Msa0433090:intron 45.0%
!!! AGGCTGCGTGTATTTTTGGT+TGG - chr3_2:85390567-85390586 Msa0433090:intron 45.0%
GCTTTCCATCACAAATCACC+CGG - chr3_2:85390589-85390608 Msa0433090:intron 45.0%
! TGTTTCCGGGTGATTTGTGA+TGG + chr3_2:85390597-85390616 Msa0433080:intron 45.0%
!! TAAGCATAGGAGTGTCGGAT+CGG - chr3_2:85390645-85390664 Msa0433090:intron 45.0%
TCCATAGCCAACAGTGGTAA+GGG + chr3_2:85390704-85390723 Msa0433080:intron 45.0%
CGGAAACATGACAAATCTGG+TGG - chr3_2:85390807-85390826 Msa0433090:intron 45.0%
TAGAGTTAGGAAATGGAGCC+TGG + chr3_2:85391281-85391300 Msa0433080:intron 45.0%
! AGCAAAAATGGACTCCCAGA+AGG - chr3_2:85392080-85392099 Msa0433090:intron 45.0%
GCTGTGTATGTGCCAACATT+TGG + chr3_2:85392115-85392134 Msa0433080:three_prime_UTR 45.0%
!! ACAGCAAGAAGAAGTGCTAC+AGG - chr3_2:85392157-85392176 Msa0433090:intron 45.0%
CTGCCTAAAGCAATTAGAGC+CGG - chr3_2:85392182-85392201 Msa0433090:intron 45.0%
CATGACATCCATCACTACAC+AGG - chr3_2:85392350-85392369 Msa0433090:intron 45.0%
AGCAGAATACTACCCGTCAA+AGG - chr3_2:85392386-85392405 Msa0433090:intron 45.0%
ATGGGTCTGAACAGGTATGA+TGG - chr3_2:85392580-85392599 Msa0433090:intron 45.0%
AACCTGAGGCAGAAGTCATT+TGG - chr3_2:85392877-85392896 Msa0433090:intron 45.0%
ACCTGAGGCAGAAGTCATTT+GGG - chr3_2:85392878-85392897 Msa0433090:intron 45.0%
CAAACTAGATCCTGGAAGCA+TGG - chr3_2:85393206-85393225 Msa0433090:intron 45.0%
ATTTCTCCTACCATGCTTCC+AGG + chr3_2:85393219-85393238 None:intergenic 45.0%
! GGAAGCATGGTAGGAGAAAT+AGG - chr3_2:85393219-85393238 Msa0433090:intron 45.0%
ACCAACTTTACTCAGGTTCG+TGG - chr3_2:85393369-85393388 Msa0433090:intron 45.0%
TCCACGAACCTGAGTAAAGT+TGG + chr3_2:85393373-85393392 None:intergenic 45.0%
TTATGAAGGGCCTAAAAGGC+GGG - chr3_2:85393672-85393691 Msa0433090:intron 45.0%
! TCTGAGTGATTTGGAAGACG+AGG - chr3_2:85393727-85393746 Msa0433090:intron 45.0%
AGCTCTTCACTGATCTAGTG+AGG - chr3_2:85393809-85393828 Msa0433090:intron 45.0%
ATGTCCTGTTTGGGAGAAAG+GGG + chr3_2:85394142-85394161 None:intergenic 45.0%
GAATGTCCTGTTTGGGAGAA+AGG + chr3_2:85394144-85394163 None:intergenic 45.0%
GGTGACATGAATGTCCTGTT+TGG + chr3_2:85394152-85394171 None:intergenic 45.0%
TCATGGACCAATTCTCGCAA+TGG - chr3_2:85394267-85394286 Msa0433090:CDS 45.0%
CAGCATCCGACACAAAATGA+GGG - chr3_2:85394573-85394592 Msa0433090:intron 45.0%
CCGTACAATCCACAGGATTA+AGG + chr3_2:85394653-85394672 None:intergenic 45.0%
TTACTGACCGTACAATCCAC+AGG + chr3_2:85394660-85394679 None:intergenic 45.0%
! TGTGGATTGTACGGTCAGTA+AGG - chr3_2:85394659-85394678 Msa0433090:CDS 45.0%
! GTGGATTGTACGGTCAGTAA+GGG - chr3_2:85394660-85394679 Msa0433090:CDS 45.0%
CAGAACCCTTGAATGTCAAC+TGG + chr3_2:85394739-85394758 None:intergenic 45.0%
GATATGTCATGTGTCACGTG+GGG - chr3_2:85395055-85395074 Msa0433090:intron 45.0%
! AAGAGGCACAACACTAATCC+TGG - chr3_2:85395105-85395124 Msa0433090:intron 45.0%
GATCTTCGACTGAATCTGGT+AGG + chr3_2:85395546-85395565 None:intergenic 45.0%
!! CCCCCCTCTATTTCTATCTT+TGG + chr3_2:85395684-85395703 None:intergenic 45.0%
AAGATAGAAATAGAGGGGGG+GGG - chr3_2:85395684-85395703 Msa0433090:CDS 45.0%
!! TTATTATGAAGCGCTGTGGG+TGG + chr3_2:85395748-85395767 None:intergenic 45.0%
!! ATTTATTAAAATTTAATTGT+AGG + chr3_2:85391721-85391740 Msa0433080:intron 5.0%
GACGTTCAAGCGGCGAAATA+AGG - chr3_2:85388868-85388887 Msa0433090:three_prime_UTR 50.0%
! AGGGCCTTTTGATCCCAACT+AGG - chr3_2:85389374-85389393 Msa0433090:CDS 50.0%
GGCACCTAGTTGGGATCAAA+AGG + chr3_2:85389381-85389400 Msa0433080:intron 50.0%
!! GTGCCACAAGGTATTGACCA+TGG - chr3_2:85389396-85389415 Msa0433090:CDS 50.0%
TGACCATGGCTTAGACCCTT+TGG - chr3_2:85389410-85389429 Msa0433090:CDS 50.0%
GAGTGGAAGCTAGATCCATG+GGG + chr3_2:85390091-85390110 Msa0433080:intron 50.0%
CAGAGTGGAAGCTAGATCCA+TGG + chr3_2:85390093-85390112 Msa0433080:intron 50.0%
CAGGCAAATCACACGACAGA+GGG - chr3_2:85390141-85390160 Msa0433090:intron 50.0%
AGGCAAATCACACGACAGAG+GGG - chr3_2:85390142-85390161 Msa0433090:intron 50.0%
TGCTTAGACTCTGGCGATTG+AGG - chr3_2:85390186-85390205 Msa0433090:intron 50.0%
ACAAATCACCCGGAAACACG+TGG - chr3_2:85390599-85390618 Msa0433090:intron 50.0%
TTCCCAATCCACGTGTTTCC+GGG + chr3_2:85390610-85390629 Msa0433080:intron 50.0%
CTTCCCAATCCACGTGTTTC+CGG + chr3_2:85390611-85390630 Msa0433080:intron 50.0%
!! AAACACGTGGATTGGGAAGC+AGG - chr3_2:85390612-85390631 Msa0433090:intron 50.0%
!! AAGCATAGGAGTGTCGGATC+GGG - chr3_2:85390646-85390665 Msa0433090:intron 50.0%
! ACCCTTACCACTGTTGGCTA+TGG - chr3_2:85390700-85390719 Msa0433090:intron 50.0%
CTCCATAGCCAACAGTGGTA+AGG + chr3_2:85390705-85390724 Msa0433080:intron 50.0%
CTCTGTCAGAACCTTTGCCA+TGG - chr3_2:85390837-85390856 Msa0433090:intron 50.0%
AGTTAGGAAATGGAGCCTGG+AGG + chr3_2:85391278-85391297 Msa0433080:intron 50.0%
TGGACTCCCAGAAGGTTTGA+AGG - chr3_2:85392088-85392107 Msa0433090:intron 50.0%
! CGGCTCTAATTGCTTTAGGC+AGG + chr3_2:85392184-85392203 Msa0433080:three_prime_UTR 50.0%
TCCCAAATGACTTCTGCCTC+AGG + chr3_2:85392882-85392901 None:intergenic 50.0%
GAGGCAGAAGTCATTTGGGA+AGG - chr3_2:85392882-85392901 Msa0433090:intron 50.0%
!! TGCTCGGAAGTGCTTGAAGA+TGG + chr3_2:85392938-85392957 None:intergenic 50.0%
GTTTGCTTCAGCAGGTTGCT+CGG + chr3_2:85392954-85392973 None:intergenic 50.0%
ATGGAACAGAAGGTCGAGCT+AGG - chr3_2:85393035-85393054 Msa0433090:intron 50.0%
! CTAGATCCTGGAAGCATGGT+AGG - chr3_2:85393210-85393229 Msa0433090:intron 50.0%
! TGAGGTCTTTGTGGCTTGCA+AGG + chr3_2:85393561-85393580 None:intergenic 50.0%
TATGAAGGGCCTAAAAGGCG+GGG - chr3_2:85393673-85393692 Msa0433090:intron 50.0%
GGTCCCCTTTCCTCAAAACA+TGG + chr3_2:85394050-85394069 None:intergenic 50.0%
GAAAGGGGACCAAGAAGTGA+AGG - chr3_2:85394059-85394078 Msa0433090:CDS 50.0%
TGTTTGGGAGAAAGGGGCAA+AGG + chr3_2:85394136-85394155 None:intergenic 50.0%
TTTGCCCCTTTCTCCCAAAC+AGG - chr3_2:85394135-85394154 Msa0433090:CDS 50.0%
GCAGCATCCGACACAAAATG+AGG - chr3_2:85394572-85394591 Msa0433090:intron 50.0%
TTGCTATGGCAAGGTAGCCT+AGG - chr3_2:85395256-85395275 Msa0433090:intron 50.0%
AGATAGAAATAGAGGGGGGG+GGG - chr3_2:85395685-85395704 Msa0433090:CDS 50.0%
AGATCTATGCGCCCTAAGAG+AGG - chr3_2:85395889-85395908 Msa0433090:CDS 50.0%
! GATCCCAACTAGGTGCCACA+AGG - chr3_2:85389384-85389403 Msa0433090:CDS 55.0%
GCAGGCAAATCACACGACAG+AGG - chr3_2:85390140-85390159 Msa0433090:intron 55.0%
CACGACAGAGGGGAAGTCTT+TGG - chr3_2:85390152-85390171 Msa0433090:intron 55.0%
TCACCCGGAAACACGTGGAT+TGG - chr3_2:85390604-85390623 Msa0433090:intron 55.0%
CACCCGGAAACACGTGGATT+GGG - chr3_2:85390605-85390624 Msa0433090:intron 55.0%
!! GTGGATTGGGAAGCAGGTAG+AGG - chr3_2:85390618-85390637 Msa0433090:intron 55.0%
TAGGAAATGGAGCCTGGAGG+TGG + chr3_2:85391275-85391294 Msa0433080:intron 55.0%
TGGGAGAAAGGGGCAAAGGA+GGG + chr3_2:85394132-85394151 None:intergenic 55.0%
TTGGGAGAAAGGGGCAAAGG+AGG + chr3_2:85394133-85394152 None:intergenic 55.0%
GACTAGGCTTGACAGTGGAC+TGG + chr3_2:85395449-85395468 None:intergenic 55.0%
ATCGGGACTAGGCTTGACAG+TGG + chr3_2:85395454-85395473 None:intergenic 55.0%
TTTCGTTGGGGTGATGTCCG+TGG + chr3_2:85395489-85395508 None:intergenic 55.0%
GATAGAAATAGAGGGGGGGG+GGG - chr3_2:85395686-85395705 Msa0433090:CDS 55.0%
ATAGAAATAGAGGGGGGGGG+GGG - chr3_2:85395687-85395706 Msa0433090:CDS 55.0%
! CTTCCAGCACCCCGCCTTTT+AGG + chr3_2:85393685-85393704 None:intergenic 60.0%
TAGAAATAGAGGGGGGGGGG+GGG - chr3_2:85395688-85395707 Msa0433090:CDS 60.0%
AGAAATAGAGGGGGGGGGGG+GGG - chr3_2:85395689-85395708 Msa0433090:CDS 65.0%
GGGCCTAAAAGGCGGGGTGC+TGG - chr3_2:85393679-85393698 Msa0433090:intron 70.0%
GAAATAGAGGGGGGGGGGGG+GGG - chr3_2:85395690-85395709 Msa0433090:CDS 70.0%
AAATAGAGGGGGGGGGGGGG+GGG - chr3_2:85395691-85395710 Msa0433090:CDS 70.0%
AATAGAGGGGGGGGGGGGGG+GGG - chr3_2:85395692-85395711 Msa0433090:CDS 75.0%
! GAGGGGGGGGGGGGGGGGGA+AGG - chr3_2:85395696-85395715 Msa0433090:CDS 90.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 85388843 85396036 85388843 ID=Msa0433090;Name=Msa0433090
chr3_2 mRNA 85388843 85396036 85388843 ID=Msa0433090-mRNA-1;Parent=Msa0433090;Name=Msa0433090-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.91|0.84|1|1|1|13|102|634
chr3_2 exon 85388843 85389048 85388843 ID=Msa0433090-mRNA-1:exon:24495;Parent=Msa0433090-mRNA-1
chr3_2 exon 85389299 85389448 85389299 ID=Msa0433090-mRNA-1:exon:24494;Parent=Msa0433090-mRNA-1
chr3_2 exon 85390204 85390303 85390204 ID=Msa0433090-mRNA-1:exon:24493;Parent=Msa0433090-mRNA-1
chr3_2 exon 85391131 85391208 85391131 ID=Msa0433090-mRNA-1:exon:24492;Parent=Msa0433090-mRNA-1
chr3_2 exon 85391496 85391681 85391496 ID=Msa0433090-mRNA-1:exon:24491;Parent=Msa0433090-mRNA-1
chr3_2 exon 85392286 85392318 85392286 ID=Msa0433090-mRNA-1:exon:24490;Parent=Msa0433090-mRNA-1
chr3_2 exon 85392409 85392507 85392409 ID=Msa0433090-mRNA-1:exon:24489;Parent=Msa0433090-mRNA-1
chr3_2 exon 85392593 85392832 85392593 ID=Msa0433090-mRNA-1:exon:24488;Parent=Msa0433090-mRNA-1
chr3_2 exon 85394021 85394338 85394021 ID=Msa0433090-mRNA-1:exon:24487;Parent=Msa0433090-mRNA-1
chr3_2 exon 85394449 85394506 85394449 ID=Msa0433090-mRNA-1:exon:24486;Parent=Msa0433090-mRNA-1
chr3_2 exon 85394648 85394812 85394648 ID=Msa0433090-mRNA-1:exon:24485;Parent=Msa0433090-mRNA-1
chr3_2 exon 85395578 85395793 85395578 ID=Msa0433090-mRNA-1:exon:24484;Parent=Msa0433090-mRNA-1
chr3_2 exon 85395879 85396036 85395879 ID=Msa0433090-mRNA-1:exon:24483;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85395879 85396036 85395879 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85395578 85395793 85395578 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85394648 85394812 85394648 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85394449 85394506 85394449 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85394021 85394338 85394021 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85392593 85392832 85392593 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85392409 85392507 85392409 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85392286 85392318 85392286 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85391496 85391681 85391496 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85391131 85391208 85391131 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85390204 85390303 85390204 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85389299 85389448 85389299 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 CDS 85388945 85389048 85388945 ID=Msa0433090-mRNA-1:cds;Parent=Msa0433090-mRNA-1
chr3_2 three_prime_UTR 85388843 85388944 85388843 ID=Msa0433090-mRNA-1:three_prime_utr;Parent=Msa0433090-mRNA-1
Gene Sequence

>Msa0433090

ATGACGTTGCCATCTCTAGTTAGAAGACGTTCAAGCGGCGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTTTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCGACCTAAAAAAATATGTTATTGCTCCCTATGATCGCAGATATAGATTGTGGCAAACGTTCCTAGTGGTATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCCATGTTGATTGCTGATCTTGTTGTCGATGCCTTCTTTGCATTTGACATAATCCTGACATTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATTCTTCCCCATGGATCTAGCTTCCACTCTGCCATTTCAGCAGATATACCAACTTATAGCAGGCAAATCACACGACAGAGGGGAAGTCTTTGGCTTTCTGAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATCAGGGTCAGCTACTCAGTAACAAGAGTCTGTAAACTGTTATGCGTTACGCTATTTGCAGTGCATTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGGAAACACGTGGATTGGGAAGCAGGTAGAGGATTTTAAGCATAGGAGTGTCGGATCGGGTTACACTTACTCCATGTACTGGTCTATTGTAACCCTTACCACTGTTGGCTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGCCTCACTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCAGAACCTTTGCCATGAGGGACGCCTTCAACAAAATATTACAATATGCGAGCAAAAATGGACTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAGCTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGAGCCGGTATTGCTCAGCATCTTTTCCACAACGTAGTTGAAAAAACAAATTTATTTAAAGGAGTCTCGGATGATTTTATATCCCAGATGGTATCAGATATGAAAGCAGAATACTACCCGTCAAAGGTTGACATCATCTTGCAAAATGAGATGCCGGCATATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATTTTAAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGCTGGTGAAACCATTTAATGAAGATGGGAAGGCAATTATCACCAACTTTACTCAGTTTATGAAGGGCCTAAAAGGCGGGGTGCTGGAAGAAATACCGTATGTAACAGAATTTCTGAGTGATTTGGAAGACGAGCATCCGACACAAAATGAGGGCACAAATGATGACATTTCAAAGTACCATGAAGAAAATCCATATGAAGAAGGTAACCTTAATCCTGTGGATTGTACGGTCAGAGAAACAGAAAATTCCAGTCCACTGTCAAGCCTAGTCCCGATTAGAGTCAAAATCCACGGACATCACCCCAACGAAAACATTGAAAATGGAACAACACCAAAGCTCATTATCCTACCAGATTCAGTCGAAGATCTTTTCAGAGTAGCAGAGAACAAGTTTGGAAAAAGAGGAAGCAAAATTCTTATGGCTGATGGCTCAGAAGTAGAAGATCTATGCGCCCTAAGAGAGGACGATGAGTTATATATCATCTAA
Protein sequence

>Msa0433090

MTLPSLVRRRSSGEIRNLASISSSLLPAFGTNPDEGYFDLKKYVIAPYDRRYRLWQTFLVVLVVYSAWASPFELAFREMSIGSMLIADLVVDAFFAFDIILTFFVAYLDKSTYFLVDDHKKIAIRYVKHLFFPMDLASTLPFQQIYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSVTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPGNTWIGKQVEDFKHRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVVEKTNLFKGVSDDFISQMVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLILKNGSEQFLFKLDPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQLVKPFNEDGKAIITNFTQFMKGLKGGVLEEIPYVTEFLSDLEDEHPTQNEGTNDDISKYHEENPYEEGNLNPVDCTVRETENSSPLSSLVPIRVKIHGHHPNENIENGTTPKLIILPDSVEDLFRVAENKFGKRGSKILMADGSEVEDLCALREDDELYII*