AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0238330


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238330 MtrunA17_Chr2g0288071 96.929 521 16 0 1 521 32 552 0.0 1057
Msa0238330 MtrunA17_Chr4g0074551 71.260 508 144 2 8 515 23 528 0.0 769
Msa0238330 MtrunA17_Chr4g0074561 68.648 488 150 2 33 517 31 518 0.0 708
Msa0238330 MtrunA17_Chr2g0288021 62.695 512 180 2 12 513 1 511 0.0 669
Msa0238330 MtrunA17_Chr2g0317841 51.287 505 244 2 7 511 3 505 0.0 548
Msa0238330 MtrunA17_Chr2g0317821 51.089 505 245 2 7 511 3 505 0.0 544
Msa0238330 MtrunA17_Chr6g0482131 49.585 482 236 5 32 509 32 510 3.60e-164 475
Msa0238330 MtrunA17_Chr2g0329191 47.629 485 242 4 34 512 32 510 6.11e-163 472
Msa0238330 MtrunA17_Chr6g0482071 48.400 500 253 5 18 514 19 516 2.53e-162 471
Msa0238330 MtrunA17_Chr2g0329201 46.955 509 263 6 9 512 2 508 3.20e-161 468
Msa0238330 MtrunA17_Chr4g0033331 48.770 488 244 5 35 519 38 522 4.19e-161 468
Msa0238330 MtrunA17_Chr4g0033271 49.367 474 235 4 39 509 38 509 4.44e-161 467
Msa0238330 MtrunA17_Chr4g0033191 48.697 499 237 6 34 515 27 523 1.47e-160 466
Msa0238330 MtrunA17_Chr4g0033201 47.431 506 259 6 9 509 7 510 9.64e-160 464
Msa0238330 MtrunA17_Chr4g0043091 45.753 518 247 9 7 509 3 501 6.89e-157 456
Msa0238330 MtrunA17_Chr4g0033311 46.374 524 267 8 9 521 5 525 1.83e-156 456
Msa0238330 MtrunA17_Chr4g0033321 47.677 495 251 5 26 517 26 515 9.83e-156 454
Msa0238330 MtrunA17_Chr4g0033401 47.782 496 251 5 25 517 26 516 1.77e-155 453
Msa0238330 MtrunA17_Chr6g0482941 49.469 471 228 6 45 513 52 514 1.09e-154 451
Msa0238330 MtrunA17_Chr4g0010501 45.657 495 260 4 17 509 5 492 9.52e-154 448
Msa0238330 MtrunA17_Chr6g0482081 47.773 494 251 6 32 521 32 522 2.30e-153 448
Msa0238330 MtrunA17_Chr3g0088441 46.843 491 254 5 35 521 37 524 2.45e-153 448
Msa0238330 MtrunA17_Chr6g0482951 49.149 470 231 6 45 513 52 514 3.90e-153 447
Msa0238330 MtrunA17_Chr4g0033341 45.261 517 269 7 1 509 31 541 2.34e-151 444
Msa0238330 MtrunA17_Chr3g0087261 45.614 513 263 5 9 513 7 511 6.86e-151 441
Msa0238330 MtrunA17_Chr4g0033261 45.817 502 242 7 11 509 17 491 8.66e-149 435
Msa0238330 MtrunA17_Chr4g0042171 48.852 479 218 8 45 509 33 498 1.07e-148 436
Msa0238330 MtrunA17_Chr3g0087271 47.024 504 252 5 18 513 16 512 4.88e-148 434
Msa0238330 MtrunA17_Chr2g0329321 44.773 507 236 7 16 509 11 486 1.13e-146 430
Msa0238330 MtrunA17_Chr3g0090131 47.193 481 226 6 39 511 24 484 9.41e-145 425
Msa0238330 MtrunA17_Chr4g0033231 44.334 503 243 6 22 512 17 494 7.00e-144 423
Msa0238330 MtrunA17_Chr3g0090111 45.661 484 246 6 39 520 22 490 1.02e-141 417
Msa0238330 MtrunA17_Chr5g0430451 45.192 520 237 7 7 509 8 496 2.74e-139 411
Msa0238330 MtrunA17_Chr4g0006111 42.383 512 248 11 12 509 45 523 7.02e-132 393
Msa0238330 MtrunA17_Chr7g0242691 41.700 494 265 7 19 509 20 493 2.54e-131 392
Msa0238330 MtrunA17_Chr4g0006971 42.680 485 261 6 34 515 25 495 4.33e-130 388
Msa0238330 MtrunA17_Chr7g0242681 43.404 470 244 9 45 509 47 499 3.12e-129 387
Msa0238330 MtrunA17_Chr4g0006131 42.308 494 247 8 31 513 37 503 2.31e-127 381
Msa0238330 MtrunA17_Chr1g0195611 40.417 480 261 9 43 516 34 494 3.86e-122 368
Msa0238330 MtrunA17_Chr5g0428831 40.000 480 264 9 43 516 34 495 4.64e-120 362
Msa0238330 MtrunA17_Chr5g0418871 53.535 297 135 3 55 350 2 296 1.11e-106 322
Msa0238330 MtrunA17_Chr2g0301231 43.029 416 201 6 104 509 1 390 4.12e-105 320
Msa0238330 MtrunA17_Chr7g0234111 38.186 474 262 9 45 511 84 533 3.42e-99 309
Msa0238330 MtrunA17_Chr1g0195641 42.037 383 205 7 43 421 34 403 2.93e-98 303
Msa0238330 MtrunA17_Chr7g0234091 37.448 478 258 10 45 510 84 532 5.30e-98 306
Msa0238330 MtrunA17_Chr3g0087201 43.413 334 180 4 178 509 16 342 1.58e-91 283
Msa0238330 MtrunA17_Chr7g0234131 36.287 474 270 9 45 510 84 533 5.73e-91 288
Msa0238330 MtrunA17_Chr7g0230651 37.795 381 207 10 83 456 18 375 1.47e-75 243
Msa0238330 MtrunA17_Chr3g0087191 53.704 162 73 2 16 176 3 163 7.30e-52 174
Msa0238330 MtrunA17_Chr7g0227561 36.170 282 135 6 25 303 43 282 6.77e-48 168
Msa0238330 MtrunA17_Chr7g0236731 40.265 226 129 2 128 352 32 252 5.46e-47 165
Msa0238330 MtrunA17_Chr4g0068871 25.647 425 236 13 100 514 183 537 2.04e-27 116
Msa0238330 MtrunA17_Chr2g0288031 61.905 63 24 0 184 246 1 63 7.56e-23 92.0
Msa0238330 MtrunA17_Chr8g0352881 39.362 94 57 0 260 353 57 150 1.89e-17 79.7
Msa0238330 MtrunA17_Chr5g0418861 43.333 90 46 3 425 509 1 90 9.76e-17 75.5
Msa0238330 MtrunA17_Chr7g0227591 51.852 54 25 1 458 510 13 66 3.99e-12 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0238330 AT1G61820.1 58.431 510 205 3 1 509 1 504 0.0 628
Msa0238330 AT1G61810.1 57.480 508 215 1 6 512 3 510 0.0 615
Msa0238330 AT4G21760.2 59.873 471 183 3 44 514 62 526 0.0 610
Msa0238330 AT1G61810.3 57.606 493 208 1 6 497 3 495 0.0 597
Msa0238330 AT4G21760.1 58.599 471 179 4 44 514 62 516 0.0 588
Msa0238330 AT1G61810.5 58.293 410 170 1 104 512 1 410 1.83e-180 513
Msa0238330 AT1G61810.4 57.314 417 177 1 6 421 3 419 4.02e-175 500
Msa0238330 AT1G61820.3 57.808 365 153 1 146 509 1 365 1.42e-160 461
Msa0238330 AT3G18080.1 46.559 494 245 6 23 509 26 507 3.19e-155 452
Msa0238330 AT3G18070.1 46.721 488 241 7 33 509 17 496 3.87e-152 444
Msa0238330 AT3G18070.3 46.311 488 237 7 33 509 17 490 1.62e-150 440
Msa0238330 AT1G26560.1 46.570 481 226 9 45 509 41 506 1.14e-149 438
Msa0238330 AT2G44480.1 44.948 485 263 4 32 514 31 513 4.87e-149 437
Msa0238330 AT2G44450.1 45.625 480 251 5 39 515 34 506 1.44e-148 436
Msa0238330 AT2G44480.3 44.948 485 263 4 32 514 62 544 1.63e-148 437
Msa0238330 AT5G54570.1 47.047 491 234 7 33 509 27 505 7.48e-148 435
Msa0238330 AT5G44640.1 43.195 507 277 6 11 513 6 505 1.94e-144 425
Msa0238330 AT5G42260.1 43.927 494 266 6 16 505 11 497 8.10e-143 421
Msa0238330 AT3G60130.1 46.186 472 239 7 44 509 38 500 5.99e-141 416
Msa0238330 AT1G02850.2 43.542 480 244 11 34 509 29 485 1.23e-135 402
Msa0238330 AT5G36890.1 43.452 504 265 6 19 520 5 490 1.57e-135 402
Msa0238330 AT5G36890.2 44.219 493 255 6 19 509 5 479 2.06e-135 401
Msa0238330 AT2G25630.1 43.083 506 256 8 16 513 6 487 3.17e-135 401
Msa0238330 AT5G24550.1 42.688 506 271 11 17 509 10 509 2.43e-132 395
Msa0238330 AT4G27830.1 41.339 508 275 12 18 520 5 494 2.62e-131 391
Msa0238330 AT1G02850.5 41.750 503 243 12 34 509 29 508 3.08e-131 392
Msa0238330 AT1G02850.4 41.667 504 243 13 34 509 29 509 2.51e-129 387
Msa0238330 AT1G61810.2 60.135 296 118 0 6 301 3 298 1.56e-128 377
Msa0238330 AT4G27820.1 41.582 493 263 10 33 520 20 492 5.64e-128 383
Msa0238330 AT3G60140.1 41.483 499 283 8 16 509 8 502 5.98e-128 385
Msa0238330 AT1G47600.2 42.650 483 257 8 33 510 42 509 3.57e-127 381
Msa0238330 AT1G47600.1 42.474 485 256 9 33 510 42 510 2.29e-126 379
Msa0238330 AT5G24540.1 43.676 506 266 11 17 509 10 509 3.79e-126 379
Msa0238330 AT5G54570.3 45.995 437 212 5 33 457 27 451 4.74e-126 376
Msa0238330 AT2G44470.3 41.386 505 282 10 16 510 6 506 5.22e-125 378
Msa0238330 AT1G51470.1 42.531 482 260 8 33 510 42 510 5.92e-125 375
Msa0238330 AT2G44480.2 44.068 413 227 4 104 514 1 411 8.27e-125 372
Msa0238330 AT1G02850.1 41.667 480 226 12 34 509 29 458 5.56e-124 371
Msa0238330 AT1G60090.1 40.239 502 274 11 17 509 5 489 3.08e-123 371
Msa0238330 AT1G60090.2 40.400 500 269 11 17 509 5 482 6.43e-123 370
Msa0238330 AT2G44460.1 42.074 511 283 10 16 517 6 512 6.89e-123 372
Msa0238330 AT4G22100.1 37.870 507 289 9 12 514 3 487 4.68e-122 368
Msa0238330 AT5G54570.2 45.952 420 201 7 104 509 1 408 9.44e-122 364
Msa0238330 AT2G44490.1 42.918 473 259 9 45 509 23 492 1.13e-121 369
Msa0238330 AT3G60120.1 42.620 481 268 8 34 509 12 489 2.06e-121 367
Msa0238330 AT3G62750.1 39.181 513 268 11 18 520 5 483 1.70e-120 363
Msa0238330 AT1G45191.4 38.039 510 292 8 7 514 1 488 2.47e-120 363
Msa0238330 AT5G25980.2 41.260 492 273 11 26 511 43 524 2.58e-120 365
Msa0238330 AT3G62750.2 38.803 518 273 11 13 520 26 509 3.97e-120 363
Msa0238330 AT3G60130.2 44.844 417 215 7 99 509 41 448 3.20e-119 359
Msa0238330 AT5G26000.1 41.498 494 266 12 26 509 31 511 8.36e-118 358
Msa0238330 AT1G45191.2 37.255 510 302 6 7 514 1 494 9.63e-118 357
Msa0238330 AT2G32860.1 41.632 478 270 8 43 514 101 575 1.36e-117 360
Msa0238330 AT2G32860.2 40.702 484 267 8 43 514 101 576 2.44e-117 359
Msa0238330 AT1G45191.6 37.087 515 301 7 7 514 1 499 9.69e-117 354
Msa0238330 AT1G45191.1 36.973 522 304 8 7 514 1 511 4.05e-115 350
Msa0238330 AT3G21370.1 40.283 494 277 12 26 509 26 511 1.04e-114 349
Msa0238330 AT3G60130.3 44.125 417 207 8 99 509 41 437 4.43e-113 343
Msa0238330 AT3G09260.1 39.554 493 283 11 26 511 28 512 2.57e-111 341
Msa0238330 AT3G62740.1 36.965 514 288 13 15 520 3 488 7.09e-111 339
Msa0238330 AT4G27830.2 40.995 422 228 9 104 520 1 406 2.84e-110 334
Msa0238330 AT1G66280.1 37.992 508 299 10 10 510 13 511 4.31e-110 337
Msa0238330 AT5G28510.1 39.315 496 285 10 26 510 30 520 5.37e-110 337
Msa0238330 AT3G18070.4 48.338 331 157 4 33 353 17 343 7.39e-110 332
Msa0238330 AT1G75940.1 40.080 499 260 13 36 511 37 519 6.11e-108 332
Msa0238330 AT4G27820.2 41.469 422 227 9 104 520 1 407 1.42e-107 327
Msa0238330 AT4G27820.3 41.469 422 227 9 104 520 1 407 1.42e-107 327
Msa0238330 AT1G66270.1 38.742 493 286 10 26 511 29 512 2.64e-107 330
Msa0238330 AT1G02850.3 41.889 413 198 9 34 421 29 424 2.52e-106 325
Msa0238330 AT1G52400.3 37.572 519 300 12 20 520 15 527 4.13e-104 322
Msa0238330 AT1G52400.1 37.572 519 300 12 20 520 15 527 4.13e-104 322
Msa0238330 AT1G66270.2 38.540 493 285 12 26 511 29 510 4.59e-104 322
Msa0238330 AT3G03640.1 36.884 507 308 8 10 509 11 512 6.34e-104 322
Msa0238330 AT2G44470.1 40.089 449 257 8 16 456 6 450 2.25e-103 318
Msa0238330 AT5G24540.2 41.907 451 245 9 17 456 10 454 4.03e-103 317
Msa0238330 AT3G18070.2 38.320 488 205 9 33 509 17 419 7.69e-103 315
Msa0238330 AT5G25980.3 40.460 435 246 9 26 457 43 467 1.07e-102 317
Msa0238330 AT5G25980.1 40.460 435 246 9 26 457 43 467 1.07e-102 317
Msa0238330 AT2G44450.2 43.333 360 195 4 158 515 3 355 1.88e-100 307
Msa0238330 AT3G62750.4 38.444 450 236 9 18 459 31 447 2.47e-100 310
Msa0238330 AT3G60140.2 40.587 409 236 6 16 421 8 412 6.07e-100 309
Msa0238330 AT2G44480.4 47.619 315 163 2 32 345 62 375 1.10e-98 304
Msa0238330 AT3G62750.6 38.876 427 222 10 104 520 1 398 1.12e-98 304
Msa0238330 AT3G62750.5 38.876 427 222 10 104 520 1 398 1.12e-98 304
Msa0238330 AT5G26000.2 40.547 439 241 10 26 457 31 456 1.35e-98 306
Msa0238330 AT1G60270.1 41.860 344 192 3 18 361 6 341 1.50e-93 290
Msa0238330 AT3G62740.2 38.499 413 227 9 15 421 3 394 4.77e-93 290
Msa0238330 AT2G44470.2 45.455 341 179 5 16 350 6 345 1.01e-92 288
Msa0238330 AT3G18070.7 45.484 310 164 3 201 509 2 307 2.94e-92 284
Msa0238330 AT1G45191.5 40.634 347 199 3 7 353 1 340 1.22e-91 286
Msa0238330 AT1G45191.3 40.634 347 199 3 7 353 1 340 1.99e-91 286
Msa0238330 AT3G62750.7 40.884 362 188 5 18 379 5 340 9.21e-91 282
Msa0238330 AT3G62750.8 40.884 362 188 5 18 379 5 340 9.21e-91 282
Msa0238330 AT3G62750.3 40.884 362 188 5 18 379 31 366 9.76e-90 282
Msa0238330 AT1G52400.2 36.504 452 266 9 20 456 15 460 2.57e-84 269
Msa0238330 AT5G48375.1 37.530 413 202 7 64 475 54 411 1.58e-82 263
Msa0238330 AT2G44460.2 41.463 369 208 7 154 517 1 366 9.90e-81 259
Msa0238330 AT2G44480.5 41.196 301 174 3 212 511 6 304 2.64e-79 251
Msa0238330 AT1G51490.1 41.127 355 184 10 44 391 28 364 8.52e-75 243
Msa0238330 AT1G60270.2 43.798 258 141 2 104 361 1 254 4.53e-74 236
Msa0238330 AT3G18070.5 35.338 399 166 7 33 421 17 333 4.00e-71 231
Msa0238330 AT3G18070.6 42.986 221 125 1 201 421 2 221 2.96e-60 199
Msa0238330 AT5G16580.1 34.564 298 171 8 175 467 21 299 1.97e-48 169
Msa0238330 AT3G06510.1 25.571 438 234 17 99 521 159 519 1.48e-24 108
Msa0238330 AT3G06510.2 25.339 442 252 16 99 514 159 548 8.67e-24 105

Find 130 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTATTATTGTTGGAAAATT+TGG 0.020623 2_2:-11775521 None:intergenic
TATTGCTCCTCGGTGTTATT+TGG 0.148605 2_2:-11775998 None:intergenic
CTCTTGGACCCAATCATATT+TGG 0.223385 2_2:+11775454 Msa0238330:CDS
TACTGCTTCTTCTGCTTATC+AGG 0.225449 2_2:+11771035 Msa0238330:CDS
CAGCTAAGCTTTCAATAGTT+TGG 0.255154 2_2:+11776575 Msa0238330:three_prime_UTR
CAGTTTCTCTTTATTATTGT+TGG 0.267265 2_2:-11775530 None:intergenic
CCTAGAATCTTCTGCATAAC+TGG 0.269306 2_2:-11775487 None:intergenic
TCTGTAGCTGTTGACTTTCA+TGG 0.280414 2_2:-11771692 None:intergenic
CCAGTTATGCAGAAGATTCT+AGG 0.281812 2_2:+11775487 Msa0238330:CDS
TATTGAAAGCTTAGCTGATT+AGG 0.287668 2_2:-11776569 None:intergenic
GCCGAGCAAGGTGGTAAAAT+TGG 0.294653 2_2:+11775119 Msa0238330:CDS
TTATCCACCAACTTCCTCTT+TGG 0.297680 2_2:+11771012 Msa0238330:CDS
TACCAATTTGCTGATAATCT+TGG 0.304336 2_2:-11776438 None:intergenic
CCCTGGCCCCGGTTCACATT+TGG 0.306719 2_2:-11775620 None:intergenic
TTATTATTGTTGGAAAATTT+GGG 0.309737 2_2:-11775520 None:intergenic
GACCTTTGTTTCAAATCATT+TGG 0.314190 2_2:+11774540 Msa0238330:CDS
CAAGATCATTCACCAATAAT+TGG 0.320824 2_2:+11775213 Msa0238330:CDS
GATTAGCAATAAAGAAATAA+AGG 0.323998 2_2:-11770935 None:intergenic
GAAAACAGGTGCAAACAATT+TGG 0.329772 2_2:+11776519 Msa0238330:three_prime_UTR
CAAGGATATACAGTAAGATT+TGG 0.333930 2_2:+11776378 Msa0238330:CDS
CTCCAAGATTATCAGCAAAT+TGG 0.343399 2_2:+11776436 Msa0238330:CDS
AAGGGAAGGATACCAATTAT+TGG 0.344977 2_2:-11775225 None:intergenic
ATTGCTCCTCGGTGTTATTT+GGG 0.349415 2_2:-11775997 None:intergenic
TTTCGTTGCTCTAAACCATT+TGG 0.367022 2_2:+11774645 Msa0238330:CDS
CATCTACTCCAAATGTGAAC+CGG 0.372200 2_2:+11775612 Msa0238330:CDS
TTGGAATAGACCCTCTGTTC+TGG 0.373095 2_2:-11775647 None:intergenic
TCAGGAAAGGAGCTGATGTT+AGG 0.373991 2_2:+11776313 Msa0238330:intron
AAGAGGAAGTTGGTGGATAA+TGG 0.375182 2_2:-11771009 None:intergenic
TTCAGAGAAGGAGCCATATC+TGG 0.375896 2_2:+11774686 Msa0238330:CDS
GCTACAGATTCTCAATTTCA+TGG 0.379188 2_2:+11771707 Msa0238330:CDS
ATGTTGTTCCATTCTTCATA+AGG 0.398326 2_2:+11776631 Msa0238330:three_prime_UTR
ATAGGAGGATATTGATCTAA+TGG 0.399957 2_2:+11771666 Msa0238330:intron
TTGATTACTTACTGTGACTC+TGG 0.401742 2_2:-11774415 None:intergenic
ATGGAAAAGGACTAAGTGAT+TGG 0.402839 2_2:+11771237 Msa0238330:CDS
GTTTCAAATCATTTGGTGAC+AGG 0.406463 2_2:+11774547 Msa0238330:CDS
CAGGAAAGGAGCTGATGTTA+GGG 0.406799 2_2:+11776314 Msa0238330:intron
ATATGTACAGGTTTGCCAAT+TGG 0.408579 2_2:-11775694 None:intergenic
GTATGCAGACTTCAATTGAT+TGG 0.408933 2_2:+11775797 Msa0238330:intron
CTATTTGATAGAGCTCTTTG+AGG 0.412003 2_2:-11770973 None:intergenic
TCCAAATGTGAACCGGGGCC+AGG 0.413114 2_2:+11775619 Msa0238330:CDS
GTCTGCCATGGAATTGCTGA+TGG 0.414631 2_2:-11775171 None:intergenic
TGACCAATATCATCGCTATC+TGG 0.417556 2_2:+11771402 Msa0238330:CDS
CCCTCTGTTCTGGTGATCCC+TGG 0.417603 2_2:-11775637 None:intergenic
AAATCTGAAATCGTTGTTTG+TGG 0.419551 2_2:+11770906 Msa0238330:CDS
GGTTATTGCAGATAAAATAA+AGG 0.424489 2_2:+11771354 Msa0238330:intron
ATATTGTGAGCCGCCAGATA+TGG 0.428490 2_2:-11774699 None:intergenic
AGATTTGGAGAAGTCAATTC+TGG 0.429869 2_2:+11771841 Msa0238330:CDS
ATGCTGCAGCTGCATGAGAT+AGG 0.433310 2_2:-11774725 None:intergenic
CCGTATGTGATCAGATAATC+TGG 0.433716 2_2:-11774597 None:intergenic
TTCGATTTACCTCAAGAACT+TGG 0.436569 2_2:+11774367 Msa0238330:CDS
TTGGTGACAGGGTAAAATAC+TGG 0.439262 2_2:+11774559 Msa0238330:CDS
ATAGCATTGTACTTGGCAAT+TGG 0.443322 2_2:-11770866 None:intergenic
GGGTATTCACCAAATATGAT+TGG 0.444833 2_2:-11775463 None:intergenic
AAACAAATCCTTATGAAGAA+TGG 0.449455 2_2:-11776639 None:intergenic
TGTGGCCATCTTGTCTGCCA+TGG 0.451791 2_2:-11775183 None:intergenic
CCATTGCATAGCATTGTACT+TGG 0.451856 2_2:-11770873 None:intergenic
ATTAGCAATAAAGAAATAAA+GGG 0.458976 2_2:-11770934 None:intergenic
TGGGCATCTGTATTCCCTAC+TGG 0.466955 2_2:+11776054 Msa0238330:CDS
CCAATGTTCATAACTGAAAA+CGG 0.470396 2_2:+11775886 Msa0238330:CDS
TATAACCCAAAGCAGGCTCT+TGG 0.471815 2_2:+11775438 Msa0238330:intron
CCTTCACTACAATTTCCAAA+TGG 0.484842 2_2:-11774660 None:intergenic
ATACCAGATAGCGATGATAT+TGG 0.485439 2_2:-11771405 None:intergenic
CAATTCCATGGCAGACAAGA+TGG 0.486386 2_2:+11775178 Msa0238330:CDS
AAAATAAAGGATGGAAGTAA+TGG 0.486610 2_2:+11771367 Msa0238330:CDS
CAGATAATCTGGCTCATTGA+AGG 0.490306 2_2:-11774586 None:intergenic
AGAGAAACTGAAGAGTGGAT+TGG 0.496388 2_2:+11775543 Msa0238330:CDS
CCAAATGTGAACCGGGGCCA+GGG 0.501757 2_2:+11775620 Msa0238330:CDS
GGTATTCACCAAATATGATT+GGG 0.509999 2_2:-11775462 None:intergenic
CCAGGGATCACCAGAACAGA+GGG 0.513293 2_2:+11775637 Msa0238330:CDS
CTACCTTATGGCTTCCAGTA+GGG 0.514255 2_2:-11776068 None:intergenic
ATCTACTCCAAATGTGAACC+GGG 0.517981 2_2:+11775613 Msa0238330:CDS
AAGTTGGTGGATAATGGAGA+TGG 0.523362 2_2:-11771003 None:intergenic
AATGGTTTAGAGCAACGAAA+TGG 0.525983 2_2:-11774642 None:intergenic
GTTCTGGTGATCCCTGGCCC+CGG 0.526822 2_2:-11775631 None:intergenic
TCTGCCATGGAATTGCTGAT+GGG 0.526829 2_2:-11775170 None:intergenic
GACAACTTCGAGTGGTTACA+AGG 0.530913 2_2:+11776360 Msa0238330:CDS
ATTCCCTACTGGAAGCCATA+AGG 0.533041 2_2:+11776065 Msa0238330:CDS
CCATTTGGAAATTGTAGTGA+AGG 0.538840 2_2:+11774660 Msa0238330:CDS
ATTGCAGATAAAATAAAGGA+TGG 0.540738 2_2:+11771358 Msa0238330:intron
TGAAATATTCAGGCCGAGCA+AGG 0.541809 2_2:+11775107 Msa0238330:intron
CTACAGATTCTCAATTTCAT+GGG 0.541994 2_2:+11771708 Msa0238330:CDS
ATGGCGGAGCTATTCCTTTG+CGG 0.542161 2_2:-11774623 None:intergenic
ATCATTAAGGTATTGCTCCT+CGG 0.545748 2_2:-11776008 None:intergenic
ATAGATGCTTTGCTTCTCAA+AGG 0.548220 2_2:+11771889 Msa0238330:CDS
CAAGAACTTGGAGACAGATA+CGG 0.550283 2_2:+11774379 Msa0238330:CDS
CTATGCAAGCTACTATATCA+AGG 0.558855 2_2:+11775585 Msa0238330:CDS
TTTCAAATCATTTGGTGACA+GGG 0.559828 2_2:+11774548 Msa0238330:CDS
GAATGATCTTGCTCTTTCTG+TGG 0.561397 2_2:-11775201 None:intergenic
TGGAAAAGGACTAAGTGATT+GGG 0.567036 2_2:+11771238 Msa0238330:CDS
CCAGATTATCTGATCACATA+CGG 0.567610 2_2:+11774597 Msa0238330:CDS
AAATAAATGAAATAAATGCC+AGG 0.571091 2_2:+11776545 Msa0238330:three_prime_UTR
CACCAAATGATTTGAAACAA+AGG 0.572359 2_2:-11774542 None:intergenic
ATCACATACGGCTACCGCAA+AGG 0.577548 2_2:+11774609 Msa0238330:CDS
AGGAAAGGAGCTGATGTTAG+GGG 0.579287 2_2:+11776315 Msa0238330:intron
CCTACCTTATGGCTTCCAGT+AGG 0.579602 2_2:-11776069 None:intergenic
TTGGAGACAGATACGGAGGT+TGG 0.580105 2_2:+11774386 Msa0238330:CDS
CAGAAGAAGCAGTACCAAAG+AGG 0.580306 2_2:-11771026 None:intergenic
AAATGTGACAGTGTTACAAA+TGG 0.581684 2_2:-11774346 None:intergenic
GCTTACTTGAGTGATGGAAA+AGG 0.582690 2_2:+11771224 Msa0238330:CDS
AAGCTTAGCTGATTAGGACC+TGG 0.584089 2_2:-11776563 None:intergenic
ATATGTTTATCCACAAGGCA+TGG 0.585187 2_2:+11775822 Msa0238330:CDS
GAAGGTGCTTACTTGAGTGA+TGG 0.593893 2_2:+11771218 Msa0238330:CDS
AGCAGTACCAAAGAGGAAGT+TGG 0.595090 2_2:-11771019 None:intergenic
TATCTGTCTCCAAGTTCTTG+AGG 0.597844 2_2:-11774376 None:intergenic
TGAACCCATCAGCAATTCCA+TGG 0.601884 2_2:+11775166 Msa0238330:CDS
ATTATCAGCAAATTGGTACA+AGG 0.603545 2_2:+11776443 Msa0238330:CDS
TGGTGACAGGGTAAAATACT+GGG 0.607341 2_2:+11774560 Msa0238330:CDS
GCCAGGGATCACCAGAACAG+AGG 0.612764 2_2:+11775636 Msa0238330:CDS
AGAATCTTCTGCATAACTGG+AGG 0.613904 2_2:-11775484 None:intergenic
AATAAAGAGAAACTGAAGAG+TGG 0.614265 2_2:+11775538 Msa0238330:CDS
GAATCTTCTGCATAACTGGA+GGG 0.614564 2_2:-11775483 None:intergenic
TGGCAATATGTTTATCCACA+AGG 0.614737 2_2:+11775817 Msa0238330:CDS
TAGTGAAGGAGATTCAGAGA+AGG 0.615316 2_2:+11774674 Msa0238330:CDS
CCACTCGAAGTTGTCGAGCA+AGG 0.631117 2_2:-11776352 None:intergenic
TTTGGAGAAGTCAATTCTGG+TGG 0.635699 2_2:+11771844 Msa0238330:CDS
CCTTGCTCGACAACTTCGAG+TGG 0.641696 2_2:+11776352 Msa0238330:CDS
GGTTTAGAGCAACGAAATGG+CGG 0.645969 2_2:-11774639 None:intergenic
AGTACCAAAGAGGAAGTTGG+TGG 0.646713 2_2:-11771016 None:intergenic
GTCTTAACACACAAAACACC+AGG 0.647038 2_2:+11771263 Msa0238330:CDS
GGAAAGGAGCTGATGTTAGG+GGG 0.656965 2_2:+11776316 Msa0238330:intron
TAAGTGTTGCATAATCAACA+TGG 0.657239 2_2:-11776407 None:intergenic
TATTTATAGAACTAAATACC+AGG 0.658162 2_2:+11774749 Msa0238330:CDS
ATAGCGATGATATTGGTCAA+CGG 0.678082 2_2:-11771398 None:intergenic
AGAGAAGGAGCCATATCTGG+CGG 0.678925 2_2:+11774689 Msa0238330:CDS
CCAAGTACAATGCTATGCAA+TGG 0.696547 2_2:+11770873 Msa0238330:exon
GTGTTGCATAATCAACATGG+TGG 0.704175 2_2:-11776404 None:intergenic
AATATTCAGGCCGAGCAAGG+TGG 0.706205 2_2:+11775110 Msa0238330:intron
GAACTTGGAGACAGATACGG+AGG 0.723965 2_2:+11774382 Msa0238330:CDS
TCTACTCCAAATGTGAACCG+GGG 0.737268 2_2:+11775614 Msa0238330:CDS
GGACAACCCAAATAACACCG+AGG 0.801540 2_2:+11775991 Msa0238330:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACATTTTTTTTTTTAAAGAA+AGG - chr2_2:11771111-11771130 None:intergenic 10.0%
!!! TCTATTATATTTTTACAATA+TGG + chr2_2:11771165-11771184 Msa0238330:intron 10.0%
!! ATAATAAAATAAATGATAGT+AGG - chr2_2:11772768-11772787 None:intergenic 10.0%
!! ATTAGCAATAAAGAAATAAA+GGG - chr2_2:11770937-11770956 None:intergenic 15.0%
!!! AAATGTATACTCTAAATTTT+AGG + chr2_2:11771578-11771597 Msa0238330:intron 15.0%
!! TATTAGTAGTAATATTATTG+TGG + chr2_2:11771637-11771656 Msa0238330:intron 15.0%
!!! GATTTTTTTGCTTATATTTT+AGG - chr2_2:11772143-11772162 None:intergenic 15.0%
!!! ACATGCATTTAATTTTATAT+TGG - chr2_2:11772247-11772266 None:intergenic 15.0%
!!! TTTTTGCTTATAAAAAAAGA+CGG + chr2_2:11772422-11772441 Msa0238330:intron 15.0%
!! AAAATACAAATGTTAATATG+TGG - chr2_2:11773356-11773375 None:intergenic 15.0%
!!! AGTCTAATTTAATTTTCTTT+AGG - chr2_2:11773569-11773588 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr2_2:11774090-11774109 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr2_2:11774089-11774108 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG - chr2_2:11773998-11774017 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG + chr2_2:11773898-11773917 Msa0238330:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr2_2:11774089-11774108 Msa0238330:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr2_2:11774090-11774109 Msa0238330:intron 15.0%
!! TATACATTAAAAAAAGAGTA+GGG + chr2_2:11774801-11774820 Msa0238330:intron 15.0%
!! AATATTTCATTCAATACAAT+TGG - chr2_2:11775096-11775115 None:intergenic 15.0%
!!! AAGTTGATTAAAAACAAAAA+AGG - chr2_2:11775261-11775280 None:intergenic 15.0%
!! TTATTATTGTTGGAAAATTT+GGG - chr2_2:11775523-11775542 None:intergenic 15.0%
!! TTTATTATTGTTGGAAAATT+TGG - chr2_2:11775524-11775543 None:intergenic 15.0%
!!! TGTTTTAATAAATTGTTTTC+AGG + chr2_2:11775956-11775975 Msa0238330:intron 15.0%
!! GATTAGCAATAAAGAAATAA+AGG - chr2_2:11770938-11770957 None:intergenic 20.0%
!! TGATTGAGCATTAAAAAAAT+AGG + chr2_2:11771470-11771489 Msa0238330:intron 20.0%
!! ATATTATTGTGGCTTAAAAT+AGG + chr2_2:11771648-11771667 Msa0238330:intron 20.0%
!!! TTTTTGCTTATATTTTAGGA+CGG - chr2_2:11772139-11772158 None:intergenic 20.0%
!! CACAATAATAACATAAAAGT+TGG - chr2_2:11772201-11772220 None:intergenic 20.0%
!!! TTCTCATTGGTTAAAAATTA+TGG - chr2_2:11772301-11772320 None:intergenic 20.0%
!! GATGTAAAAATAATTCTCAT+TGG - chr2_2:11772314-11772333 None:intergenic 20.0%
!! ATAAATGATAGTAGGTATTA+TGG - chr2_2:11772760-11772779 None:intergenic 20.0%
!!! AACATAAAAGTTACTGTTTT+TGG + chr2_2:11773098-11773117 Msa0238330:intron 20.0%
!! TCATAAAATTAAGAGATCAT+TGG - chr2_2:11773508-11773527 None:intergenic 20.0%
!!! ACTACCTACTATTTTTATTT+TGG + chr2_2:11773601-11773620 Msa0238330:intron 20.0%
!!! CTACCTACTATTTTTATTTT+GGG + chr2_2:11773602-11773621 Msa0238330:intron 20.0%
!! TAACCCAAAATAAAAATAGT+AGG - chr2_2:11773608-11773627 None:intergenic 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG + chr2_2:11773933-11773952 Msa0238330:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG + chr2_2:11774027-11774046 Msa0238330:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG + chr2_2:11774028-11774047 Msa0238330:intron 20.0%
!! ATGTATATGTACAATAAGAA+GGG - chr2_2:11774444-11774463 None:intergenic 20.0%
!! TATTTATAGAACTAAATACC+AGG + chr2_2:11774749-11774768 Msa0238330:CDS 20.0%
!! CTATACATTAAAAAAAGAGT+AGG + chr2_2:11774800-11774819 Msa0238330:intron 20.0%
!!! CTTATTGAATGAATTTTATG+TGG - chr2_2:11774926-11774945 None:intergenic 20.0%
!! TTGTATTGAATGAAATATTC+AGG + chr2_2:11775097-11775116 Msa0238330:intron 20.0%
!! AAAAAAGGTTGTTTATTGAA+GGG - chr2_2:11775246-11775265 None:intergenic 20.0%
!! GTTTCATTAATCATTATGTA+AGG - chr2_2:11775726-11775745 None:intergenic 20.0%
!!! ATTGTATCTGTTTTTTAGAT+AGG - chr2_2:11775860-11775879 None:intergenic 20.0%
!!! AATAAATTGTTTTCAGGTTA+CGG + chr2_2:11775962-11775981 Msa0238330:intron 20.0%
!! ATCTTAATTTATGTATCTTC+TGG - chr2_2:11776260-11776279 None:intergenic 20.0%
!!! TTTCCTTTTATCATTTTTCT+TGG - chr2_2:11776503-11776522 None:intergenic 20.0%
!! AAAAATGATAAAAGGAAAAC+AGG + chr2_2:11776505-11776524 Msa0238330:exon 20.0%
!! AAATAAATGAAATAAATGCC+AGG + chr2_2:11776545-11776564 Msa0238330:three_prime_UTR 20.0%
!!! TGGTGTTATTGATTTAAAAC+TGG + chr2_2:11771333-11771352 Msa0238330:intron 25.0%
! GGTTATTGCAGATAAAATAA+AGG + chr2_2:11771354-11771373 Msa0238330:intron 25.0%
! ATTGCAGATAAAATAAAGGA+TGG + chr2_2:11771358-11771377 Msa0238330:intron 25.0%
! AAAATAAAGGATGGAAGTAA+TGG + chr2_2:11771367-11771386 Msa0238330:CDS 25.0%
!! ATCAAATTAAGAAGCATACT+TGG - chr2_2:11771745-11771764 None:intergenic 25.0%
! TCACATTAATTAAAGAATGC+TGG + chr2_2:11771942-11771961 Msa0238330:intron 25.0%
!!! ATAATTTTTTGTGTTCTGCT+TGG - chr2_2:11772354-11772373 None:intergenic 25.0%
! GTTAAAGGAAATAAAGTATG+AGG - chr2_2:11772920-11772939 None:intergenic 25.0%
! ATGTTGAAGATTAATAGAGT+GGG - chr2_2:11773083-11773102 None:intergenic 25.0%
! TATGTTGAAGATTAATAGAG+TGG - chr2_2:11773084-11773103 None:intergenic 25.0%
!!! CTTTTGAAAATACAAGTGAT+TGG + chr2_2:11773234-11773253 Msa0238330:intron 25.0%
!! TTTCATGAACTTCTTTTGAT+CGG - chr2_2:11773313-11773332 None:intergenic 25.0%
! CATTGGAAAATGAAATTGAA+AGG - chr2_2:11773491-11773510 None:intergenic 25.0%
!! CTCTTAATTTTATGAAACAC+AGG + chr2_2:11773513-11773532 Msa0238330:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG - chr2_2:11773738-11773757 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG - chr2_2:11773739-11773758 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG + chr2_2:11774061-11774080 Msa0238330:intron 25.0%
! TAAAAAGAACTTTATAGACG+TGG + chr2_2:11774245-11774264 Msa0238330:intron 25.0%
! CATGTATATGTACAATAAGA+AGG - chr2_2:11774445-11774464 None:intergenic 25.0%
! TATAAACTTAAAAGACTACC+TGG - chr2_2:11774770-11774789 None:intergenic 25.0%
! ATAAGACATTTGCAATATGA+TGG + chr2_2:11774897-11774916 Msa0238330:intron 25.0%
! TAAGACATTTGCAATATGAT+GGG + chr2_2:11774898-11774917 Msa0238330:intron 25.0%
! GAAGTGATATTGCTTAAAAA+TGG + chr2_2:11775043-11775062 Msa0238330:intron 25.0%
! CAAAAAAGGTTGTTTATTGA+AGG - chr2_2:11775247-11775266 None:intergenic 25.0%
! CAGTTTCTCTTTATTATTGT+TGG - chr2_2:11775533-11775552 None:intergenic 25.0%
! TTAACAGAAGTTTCGTAATT+AGG - chr2_2:11775774-11775793 None:intergenic 25.0%
!! TTTTTCTGTCGAAATCATTA+AGG - chr2_2:11776024-11776043 None:intergenic 25.0%
!! TTTTCATATATCCTACCTTA+TGG - chr2_2:11776083-11776102 None:intergenic 25.0%
! ACAAACAAAAAAGACAGATA+GGG - chr2_2:11776175-11776194 None:intergenic 25.0%
! TACAAACAAAAAAGACAGAT+AGG - chr2_2:11776176-11776195 None:intergenic 25.0%
! AAACAAATCCTTATGAAGAA+TGG - chr2_2:11776642-11776661 None:intergenic 25.0%
! AAATCTGAAATCGTTGTTTG+TGG + chr2_2:11770906-11770925 Msa0238330:CDS 30.0%
! ATGATCATTTTGCAGTATGA+AGG + chr2_2:11771200-11771219 Msa0238330:intron 30.0%
TAATTATCATCATCATCACC+TGG - chr2_2:11771284-11771303 None:intergenic 30.0%
GTCACTGAACAAATTTAAGA+TGG + chr2_2:11771313-11771332 Msa0238330:intron 30.0%
!! TAGGAAAGTGTTAACAGAAA+AGG + chr2_2:11771489-11771508 Msa0238330:intron 30.0%
CCTACTCAAACACTTAAAAT+GGG - chr2_2:11771517-11771536 None:intergenic 30.0%
ACCTACTCAAACACTTAAAA+TGG - chr2_2:11771518-11771537 None:intergenic 30.0%
! TCTCACATGGATTGATTATT+AGG + chr2_2:11771537-11771556 Msa0238330:intron 30.0%
TTATTGTGGCTTAAAATAGG+AGG + chr2_2:11771651-11771670 Msa0238330:intron 30.0%
ATAGGAGGATATTGATCTAA+TGG + chr2_2:11771666-11771685 Msa0238330:intron 30.0%
CTACAGATTCTCAATTTCAT+GGG + chr2_2:11771708-11771727 Msa0238330:CDS 30.0%
CATTCTCATTAAATAAGAGC+TGG - chr2_2:11771922-11771941 None:intergenic 30.0%
! ATAAGGTGAATAAATGGACT+CGG - chr2_2:11772009-11772028 None:intergenic 30.0%
CATCTCATAAGGTGAATAAA+TGG - chr2_2:11772015-11772034 None:intergenic 30.0%
GGTCAAAAATTCATCTCATA+AGG - chr2_2:11772026-11772045 None:intergenic 30.0%
GATCTACATTGCTCTAATTA+AGG + chr2_2:11772065-11772084 Msa0238330:intron 30.0%
TACAAAAGTAATGCACAAGT+GGG - chr2_2:11772099-11772118 None:intergenic 30.0%
TTACAAAAGTAATGCACAAG+TGG - chr2_2:11772100-11772119 None:intergenic 30.0%
TACCTCAAATCACTAAGTAT+TGG + chr2_2:11772373-11772392 Msa0238330:intron 30.0%
AACCAATACTTAGTGATTTG+AGG - chr2_2:11772378-11772397 None:intergenic 30.0%
TTGCTTATAAAAAAAGACGG+AGG + chr2_2:11772425-11772444 Msa0238330:intron 30.0%
TGCTTATAAAAAAAGACGGA+GGG + chr2_2:11772426-11772445 Msa0238330:intron 30.0%
GCAATATCAAATTGTATGTG+GGG - chr2_2:11772474-11772493 None:intergenic 30.0%
GGCAATATCAAATTGTATGT+GGG - chr2_2:11772475-11772494 None:intergenic 30.0%
AAACATGAAGGAAAGATTGA+AGG + chr2_2:11772580-11772599 Msa0238330:intron 30.0%
TAGTGAAAGTGAATAGAAAG+TGG - chr2_2:11772854-11772873 None:intergenic 30.0%
TAAAGTATGAGGAAAGTGAA+TGG - chr2_2:11772909-11772928 None:intergenic 30.0%
GTAAGAGGAAAGATTGTTAA+AGG - chr2_2:11772935-11772954 None:intergenic 30.0%
TGTCGATAGAGAAAAGTTAA+TGG + chr2_2:11773026-11773045 Msa0238330:intron 30.0%
!! ATTCACAAGAGTACTATCTT+TGG + chr2_2:11773281-11773300 Msa0238330:intron 30.0%
! TTATGAAACACAGGATGTTT+TGG + chr2_2:11773522-11773541 Msa0238330:intron 30.0%
ATAGTAGGTAGTCTAATAGT+AGG - chr2_2:11773593-11773612 None:intergenic 30.0%
!! TACAAGGTCGCTATTTTATA+GGG - chr2_2:11774121-11774140 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG - chr2_2:11774120-11774139 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG + chr2_2:11773801-11773820 Msa0238330:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG + chr2_2:11774060-11774079 Msa0238330:intron 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr2_2:11774120-11774139 Msa0238330:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr2_2:11774121-11774140 Msa0238330:intron 30.0%
ACTTTGATTCTCTGATGAAT+TGG + chr2_2:11774304-11774323 Msa0238330:intron 30.0%
AAATGTGACAGTGTTACAAA+TGG - chr2_2:11774349-11774368 None:intergenic 30.0%
! GACCTTTGTTTCAAATCATT+TGG + chr2_2:11774540-11774559 Msa0238330:CDS 30.0%
! CACCAAATGATTTGAAACAA+AGG - chr2_2:11774545-11774564 None:intergenic 30.0%
! TTTCAAATCATTTGGTGACA+GGG + chr2_2:11774548-11774567 Msa0238330:CDS 30.0%
! TTCAATAAGAGAGTGAGTTT+TGG + chr2_2:11774937-11774956 Msa0238330:intron 30.0%
TGTCTTAGCATATATAAAGG+TGG - chr2_2:11774993-11775012 None:intergenic 30.0%
CCTTGTCTTAGCATATATAA+AGG - chr2_2:11774996-11775015 None:intergenic 30.0%
CCTTTATATATGCTAAGACA+AGG + chr2_2:11774993-11775012 Msa0238330:intron 30.0%
! TTCACAATTGTCGTTGATAA+GGG + chr2_2:11775019-11775038 Msa0238330:intron 30.0%
CAAGATCATTCACCAATAAT+TGG + chr2_2:11775213-11775232 Msa0238330:CDS 30.0%
TAATAACTATAACCCAAAGC+AGG + chr2_2:11775431-11775450 Msa0238330:intron 30.0%
GGTATTCACCAAATATGATT+GGG - chr2_2:11775465-11775484 None:intergenic 30.0%
AATAAAGAGAAACTGAAGAG+TGG + chr2_2:11775538-11775557 Msa0238330:CDS 30.0%
!!! AAGAGTGGATTGGATTTTAT+TGG + chr2_2:11775553-11775572 Msa0238330:CDS 30.0%
GTAAGGTTGAAAATATGTAC+AGG - chr2_2:11775709-11775728 None:intergenic 30.0%
CCAATGTTCATAACTGAAAA+CGG + chr2_2:11775886-11775905 Msa0238330:CDS 30.0%
TATAACAGTGAATCCTCTAA+TGG + chr2_2:11775913-11775932 Msa0238330:intron 30.0%
TTTCGACAGAAAAAACTACA+TGG + chr2_2:11776030-11776049 Msa0238330:CDS 30.0%
TAGAATGCACTTCATATATC+TGG - chr2_2:11776119-11776138 None:intergenic 30.0%
TTCACTAGTCATAAAGCAAA+GGG - chr2_2:11776234-11776253 None:intergenic 30.0%
ATTCACTAGTCATAAAGCAA+AGG - chr2_2:11776235-11776254 None:intergenic 30.0%
TTTCCTGATTACATGGTAAA+TGG - chr2_2:11776301-11776320 None:intergenic 30.0%
ATTTACCATGTAATCAGGAA+AGG + chr2_2:11776300-11776319 Msa0238330:intron 30.0%
CAAGGATATACAGTAAGATT+TGG + chr2_2:11776378-11776397 Msa0238330:CDS 30.0%
! TAAGTGTTGCATAATCAACA+TGG - chr2_2:11776410-11776429 None:intergenic 30.0%
!! TACCAATTTGCTGATAATCT+TGG - chr2_2:11776441-11776460 None:intergenic 30.0%
ATTATCAGCAAATTGGTACA+AGG + chr2_2:11776443-11776462 Msa0238330:CDS 30.0%
!! CCTTTTATCATTTTTCTTGG+CGG - chr2_2:11776500-11776519 None:intergenic 30.0%
TATTGAAAGCTTAGCTGATT+AGG - chr2_2:11776572-11776591 None:intergenic 30.0%
ATGTTGTTCCATTCTTCATA+AGG + chr2_2:11776631-11776650 Msa0238330:three_prime_UTR 30.0%
ATAGCATTGTACTTGGCAAT+TGG - chr2_2:11770869-11770888 None:intergenic 35.0%
CTATTTGATAGAGCTCTTTG+AGG - chr2_2:11770976-11770995 None:intergenic 35.0%
ATGGAAAAGGACTAAGTGAT+TGG + chr2_2:11771237-11771256 Msa0238330:CDS 35.0%
TGGAAAAGGACTAAGTGATT+GGG + chr2_2:11771238-11771257 Msa0238330:CDS 35.0%
ATAGCGATGATATTGGTCAA+CGG - chr2_2:11771401-11771420 None:intergenic 35.0%
ATACCAGATAGCGATGATAT+TGG - chr2_2:11771408-11771427 None:intergenic 35.0%
!! CCCATTTTAAGTGTTTGAGT+AGG + chr2_2:11771514-11771533 Msa0238330:intron 35.0%
GCTACAGATTCTCAATTTCA+TGG + chr2_2:11771707-11771726 Msa0238330:CDS 35.0%
! AAGAATTGATTTCAAGCAGC+TGG - chr2_2:11771788-11771807 None:intergenic 35.0%
! TTTGATACCCTTTTTGCAGA+AGG + chr2_2:11771817-11771836 Msa0238330:intron 35.0%
AAATCTGCCTTCTGCAAAAA+GGG - chr2_2:11771827-11771846 None:intergenic 35.0%
AGATTTGGAGAAGTCAATTC+TGG + chr2_2:11771841-11771860 Msa0238330:CDS 35.0%
ATAGATGCTTTGCTTCTCAA+AGG + chr2_2:11771889-11771908 Msa0238330:CDS 35.0%
! TCGGATGATTTTTGTTGACA+TGG - chr2_2:11771990-11772009 None:intergenic 35.0%
! TTTTGACCACTAAGTTACTC+AGG + chr2_2:11772038-11772057 Msa0238330:intron 35.0%
ACAAAAGTAATGCACAAGTG+GGG - chr2_2:11772098-11772117 None:intergenic 35.0%
!!! TGCTTATATTTTAGGACGGA+GGG - chr2_2:11772135-11772154 None:intergenic 35.0%
!!! TTGCTTATATTTTAGGACGG+AGG - chr2_2:11772136-11772155 None:intergenic 35.0%
TCTGCTTGGAATAAGTTTCA+TGG - chr2_2:11772340-11772359 None:intergenic 35.0%
GGGCAATATCAAATTGTATG+TGG - chr2_2:11772476-11772495 None:intergenic 35.0%
! TGCACTAAACAAGCTTTTGT+GGG - chr2_2:11772498-11772517 None:intergenic 35.0%
CTTTAGTAGCAGTATCATCA+TGG - chr2_2:11772540-11772559 None:intergenic 35.0%
TACTAAAGACTGTGTTTGGT+TGG + chr2_2:11772552-11772571 Msa0238330:intron 35.0%
ACTAAAGACTGTGTTTGGTT+GGG + chr2_2:11772553-11772572 Msa0238330:intron 35.0%
AAAGATTGAAGGTGGAAAGA+AGG + chr2_2:11772591-11772610 Msa0238330:intron 35.0%
GAAAGTGAATAGAAAGTGGA+AGG - chr2_2:11772850-11772869 None:intergenic 35.0%
!! GGAAAGTGAGATGATTTGTT+AGG - chr2_2:11772888-11772907 None:intergenic 35.0%
ATCTTTCCTCTCACTTTCTT+TGG + chr2_2:11772956-11772975 Msa0238330:intron 35.0%
!! CACATTTTCCTTAGCCTTTA+GGG - chr2_2:11772995-11773014 None:intergenic 35.0%
! ATGAACTTCTTTTGATCGGT+AGG - chr2_2:11773309-11773328 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr2_2:11774105-11774124 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr2_2:11774105-11774124 Msa0238330:intron 35.0%
ACTAGAGTACATATAGTACG+TGG + chr2_2:11774209-11774228 Msa0238330:intron 35.0%
TTCGATTTACCTCAAGAACT+TGG + chr2_2:11774367-11774386 Msa0238330:CDS 35.0%
TTGATTACTTACTGTGACTC+TGG - chr2_2:11774418-11774437 None:intergenic 35.0%
TCAATACTTGATTGATGCAC+AGG + chr2_2:11774496-11774515 Msa0238330:intron 35.0%
CAATACTTGATTGATGCACA+GGG + chr2_2:11774497-11774516 Msa0238330:intron 35.0%
! GTTTCAAATCATTTGGTGAC+AGG + chr2_2:11774547-11774566 Msa0238330:CDS 35.0%
CCAGATTATCTGATCACATA+CGG + chr2_2:11774597-11774616 Msa0238330:CDS 35.0%
! AATGGTTTAGAGCAACGAAA+TGG - chr2_2:11774645-11774664 None:intergenic 35.0%
! TTTCGTTGCTCTAAACCATT+TGG + chr2_2:11774645-11774664 Msa0238330:CDS 35.0%
CCTTCACTACAATTTCCAAA+TGG - chr2_2:11774663-11774682 None:intergenic 35.0%
CCATTTGGAAATTGTAGTGA+AGG + chr2_2:11774660-11774679 Msa0238330:CDS 35.0%
CTTCACAATTGTCGTTGATA+AGG + chr2_2:11775018-11775037 Msa0238330:intron 35.0%
AAGGGAAGGATACCAATTAT+TGG - chr2_2:11775228-11775247 None:intergenic 35.0%
AAGGTTGTTTATTGAAGGGA+AGG - chr2_2:11775242-11775261 None:intergenic 35.0%
GTTACTACATGTGTTCGTAT+TGG + chr2_2:11775365-11775384 Msa0238330:intron 35.0%
! TAGAGAATGAGCTTGTTTGA+AGG - chr2_2:11775396-11775415 None:intergenic 35.0%
GGGTATTCACCAAATATGAT+TGG - chr2_2:11775466-11775485 None:intergenic 35.0%
CTATGCAAGCTACTATATCA+AGG + chr2_2:11775585-11775604 Msa0238330:CDS 35.0%
GAAAAAGATGGTGTTCCAAT+TGG + chr2_2:11775679-11775698 Msa0238330:CDS 35.0%
ATATGTACAGGTTTGCCAAT+TGG - chr2_2:11775697-11775716 None:intergenic 35.0%
CAGAAGTTTCGTAATTAGGT+TGG - chr2_2:11775770-11775789 None:intergenic 35.0%
GTATGCAGACTTCAATTGAT+TGG + chr2_2:11775797-11775816 Msa0238330:intron 35.0%
TGGCAATATGTTTATCCACA+AGG + chr2_2:11775817-11775836 Msa0238330:CDS 35.0%
! CCGTTTTCAGTTATGAACAT+TGG - chr2_2:11775889-11775908 None:intergenic 35.0%
!! ATCATTAAGGTATTGCTCCT+CGG - chr2_2:11776011-11776030 None:intergenic 35.0%
ACAGAAAAAACTACATGGCT+GGG + chr2_2:11776035-11776054 Msa0238330:CDS 35.0%
! TTGCCATTTACCATGTAATC+AGG + chr2_2:11776295-11776314 Msa0238330:intron 35.0%
CTCCAAGATTATCAGCAAAT+TGG + chr2_2:11776436-11776455 Msa0238330:CDS 35.0%
CCGCCAAGAAAAATGATAAA+AGG + chr2_2:11776497-11776516 Msa0238330:exon 35.0%
GAAAACAGGTGCAAACAATT+TGG + chr2_2:11776519-11776538 Msa0238330:three_prime_UTR 35.0%
CAGCTAAGCTTTCAATAGTT+TGG + chr2_2:11776575-11776594 Msa0238330:three_prime_UTR 35.0%
CCATTGCATAGCATTGTACT+TGG - chr2_2:11770876-11770895 None:intergenic 40.0%
CCAAGTACAATGCTATGCAA+TGG + chr2_2:11770873-11770892 Msa0238330:exon 40.0%
!! AAGTTGGTGGATAATGGAGA+TGG - chr2_2:11771006-11771025 None:intergenic 40.0%
!! AAGAGGAAGTTGGTGGATAA+TGG - chr2_2:11771012-11771031 None:intergenic 40.0%
TTATCCACCAACTTCCTCTT+TGG + chr2_2:11771012-11771031 Msa0238330:CDS 40.0%
TACTGCTTCTTCTGCTTATC+AGG + chr2_2:11771035-11771054 Msa0238330:CDS 40.0%
! GCTTACTTGAGTGATGGAAA+AGG + chr2_2:11771224-11771243 Msa0238330:CDS 40.0%
GTCTTAACACACAAAACACC+AGG + chr2_2:11771263-11771282 Msa0238330:CDS 40.0%
TGACCAATATCATCGCTATC+TGG + chr2_2:11771402-11771421 Msa0238330:CDS 40.0%
!! TCTGTAGCTGTTGACTTTCA+TGG - chr2_2:11771695-11771714 None:intergenic 40.0%
CAAATCTGCCTTCTGCAAAA+AGG - chr2_2:11771828-11771847 None:intergenic 40.0%
! CTTTTTGCAGAAGGCAGATT+TGG + chr2_2:11771826-11771845 Msa0238330:intron 40.0%
TTTGGAGAAGTCAATTCTGG+TGG + chr2_2:11771844-11771863 Msa0238330:CDS 40.0%
! CACTAAACAAGCTTTTGTGG+GGG - chr2_2:11772496-11772515 None:intergenic 40.0%
! GCACTAAACAAGCTTTTGTG+GGG - chr2_2:11772497-11772516 None:intergenic 40.0%
! GTGCACTAAACAAGCTTTTG+TGG - chr2_2:11772499-11772518 None:intergenic 40.0%
CTGCTACTAAAGACTGTGTT+TGG + chr2_2:11772548-11772567 Msa0238330:intron 40.0%
CATGAAGGAAAGATTGAAGG+TGG + chr2_2:11772583-11772602 Msa0238330:intron 40.0%
TTGAAGGTGGAAAGAAGGAA+CGG + chr2_2:11772596-11772615 Msa0238330:intron 40.0%
AACAGCCTAAGAAAGAGAAG+TGG + chr2_2:11772644-11772663 Msa0238330:intron 40.0%
TCCATCCACTTCTCTTTCTT+AGG - chr2_2:11772652-11772671 None:intergenic 40.0%
!! AAGTGGATGGATTGTTTGCA+TGG + chr2_2:11772661-11772680 Msa0238330:intron 40.0%
!! AGTGGATGGATTGTTTGCAT+GGG + chr2_2:11772662-11772681 Msa0238330:intron 40.0%
! ATGGTGTGCGGAAACATTTT+TGG - chr2_2:11772695-11772714 None:intergenic 40.0%
AAAATGTTTCCGCACACCAT+AGG + chr2_2:11772695-11772714 Msa0238330:intron 40.0%
GTGAGAGGAAAGATTGTAAG+AGG - chr2_2:11772950-11772969 None:intergenic 40.0%
!! CCACATTTTCCTTAGCCTTT+AGG - chr2_2:11772996-11773015 None:intergenic 40.0%
CCTAAAGGCTAAGGAAAATG+TGG + chr2_2:11772993-11773012 Msa0238330:intron 40.0%
TGATGAATTGGACAACTTGC+AGG + chr2_2:11774316-11774335 Msa0238330:intron 40.0%
TATCTGTCTCCAAGTTCTTG+AGG - chr2_2:11774379-11774398 None:intergenic 40.0%
CAAGAACTTGGAGACAGATA+CGG + chr2_2:11774379-11774398 Msa0238330:CDS 40.0%
! TTGGTGACAGGGTAAAATAC+TGG + chr2_2:11774559-11774578 Msa0238330:CDS 40.0%
TGGTGACAGGGTAAAATACT+GGG + chr2_2:11774560-11774579 Msa0238330:CDS 40.0%
! CAGATAATCTGGCTCATTGA+AGG - chr2_2:11774589-11774608 None:intergenic 40.0%
CCGTATGTGATCAGATAATC+TGG - chr2_2:11774600-11774619 None:intergenic 40.0%
TAGTGAAGGAGATTCAGAGA+AGG + chr2_2:11774674-11774693 Msa0238330:CDS 40.0%
!! GCATTGTCTTGCATTTTGAC+TGG + chr2_2:11775141-11775160 Msa0238330:CDS 40.0%
GAATGATCTTGCTCTTTCTG+TGG - chr2_2:11775204-11775223 None:intergenic 40.0%
!!! GTATGTGTCACTGTCGTTTT+CGG - chr2_2:11775312-11775331 None:intergenic 40.0%
! GAATGAGCTTGTTTGAAGGT+GGG - chr2_2:11775392-11775411 None:intergenic 40.0%
! AGAATGAGCTTGTTTGAAGG+TGG - chr2_2:11775393-11775412 None:intergenic 40.0%
CTCTTGGACCCAATCATATT+TGG + chr2_2:11775454-11775473 Msa0238330:CDS 40.0%
GAATCTTCTGCATAACTGGA+GGG - chr2_2:11775486-11775505 None:intergenic 40.0%
AGAATCTTCTGCATAACTGG+AGG - chr2_2:11775487-11775506 None:intergenic 40.0%
CCTAGAATCTTCTGCATAAC+TGG - chr2_2:11775490-11775509 None:intergenic 40.0%
CCAGTTATGCAGAAGATTCT+AGG + chr2_2:11775487-11775506 Msa0238330:CDS 40.0%
AGAGAAACTGAAGAGTGGAT+TGG + chr2_2:11775543-11775562 Msa0238330:CDS 40.0%
CATCTACTCCAAATGTGAAC+CGG + chr2_2:11775612-11775631 Msa0238330:CDS 40.0%
ATCTACTCCAAATGTGAACC+GGG + chr2_2:11775613-11775632 Msa0238330:CDS 40.0%
! CATCTTTTTCTGCACTCTGT+TGG - chr2_2:11775669-11775688 None:intergenic 40.0%
CAACAGAGTGCAGAAAAAGA+TGG + chr2_2:11775667-11775686 Msa0238330:CDS 40.0%
ACAGTGAATCCTCTAATGGA+TGG + chr2_2:11775917-11775936 Msa0238330:intron 40.0%
ACAGAAACTCCATCCATTAG+AGG - chr2_2:11775929-11775948 None:intergenic 40.0%
!! ATTGCTCCTCGGTGTTATTT+GGG - chr2_2:11776000-11776019 None:intergenic 40.0%
!! TATTGCTCCTCGGTGTTATT+TGG - chr2_2:11776001-11776020 None:intergenic 40.0%
GACAGAAAAAACTACATGGC+TGG + chr2_2:11776034-11776053 Msa0238330:CDS 40.0%
GTGTTGCATAATCAACATGG+TGG - chr2_2:11776407-11776426 None:intergenic 40.0%
AGTACCAAAGAGGAAGTTGG+TGG - chr2_2:11771019-11771038 None:intergenic 45.0%
AGCAGTACCAAAGAGGAAGT+TGG - chr2_2:11771022-11771041 None:intergenic 45.0%
CAGAAGAAGCAGTACCAAAG+AGG - chr2_2:11771029-11771048 None:intergenic 45.0%
!! GAAGGTGCTTACTTGAGTGA+TGG + chr2_2:11771218-11771237 Msa0238330:CDS 45.0%
GTGTTTGAGTAGGTCTCACA+TGG + chr2_2:11771524-11771543 Msa0238330:intron 45.0%
TCAGTGCCTGAGTAACTTAG+TGG - chr2_2:11772047-11772066 None:intergenic 45.0%
! TGGTTGGGCTAGAAACATGA+AGG + chr2_2:11772568-11772587 Msa0238330:intron 45.0%
TCCAACATCCTTCCTCAGTT+TGG + chr2_2:11772621-11772640 Msa0238330:intron 45.0%
TCCAAACTGAGGAAGGATGT+TGG - chr2_2:11772625-11772644 None:intergenic 45.0%
TCTTAGGCTGTTCCAAACTG+AGG - chr2_2:11772636-11772655 None:intergenic 45.0%
GCCTAAGAAAGAGAAGTGGA+TGG + chr2_2:11772648-11772667 Msa0238330:intron 45.0%
!!! TGCGGAAACATTTTTGGCGT+GGG - chr2_2:11772689-11772708 None:intergenic 45.0%
ACTTTCTGTCCTATGGTGTG+CGG - chr2_2:11772707-11772726 None:intergenic 45.0%
CACACCATAGGACAGAAAGT+GGG + chr2_2:11772707-11772726 Msa0238330:intron 45.0%
GGATCACCAAAGAAAGTGAG+AGG - chr2_2:11772965-11772984 None:intergenic 45.0%
GTGATCCAAACACACCCTAA+AGG + chr2_2:11772978-11772997 Msa0238330:intron 45.0%
!! CTTAGCCTTTAGGGTGTGTT+TGG - chr2_2:11772986-11773005 None:intergenic 45.0%
CAAACACACCCTAAAGGCTA+AGG + chr2_2:11772984-11773003 Msa0238330:intron 45.0%
! GGTTTAGAGCAACGAAATGG+CGG - chr2_2:11774642-11774661 None:intergenic 45.0%
TTCAGAGAAGGAGCCATATC+TGG + chr2_2:11774686-11774705 Msa0238330:CDS 45.0%
ATATTGTGAGCCGCCAGATA+TGG - chr2_2:11774702-11774721 None:intergenic 45.0%
TGAAATATTCAGGCCGAGCA+AGG + chr2_2:11775107-11775126 Msa0238330:intron 45.0%
! GCCAATTTTACCACCTTGCT+CGG - chr2_2:11775123-11775142 None:intergenic 45.0%
TGAACCCATCAGCAATTCCA+TGG + chr2_2:11775166-11775185 Msa0238330:CDS 45.0%
TCTGCCATGGAATTGCTGAT+GGG - chr2_2:11775173-11775192 None:intergenic 45.0%
CAATTCCATGGCAGACAAGA+TGG + chr2_2:11775178-11775197 Msa0238330:CDS 45.0%
TATAACCCAAAGCAGGCTCT+TGG + chr2_2:11775438-11775457 Msa0238330:intron 45.0%
TCTACTCCAAATGTGAACCG+GGG + chr2_2:11775614-11775633 Msa0238330:CDS 45.0%
TTGGAATAGACCCTCTGTTC+TGG - chr2_2:11775650-11775669 None:intergenic 45.0%
ATTCCCTACTGGAAGCCATA+AGG + chr2_2:11776065-11776084 Msa0238330:CDS 45.0%
CTACCTTATGGCTTCCAGTA+GGG - chr2_2:11776071-11776090 None:intergenic 45.0%
CAGCTCCTTTCCTGATTACA+TGG - chr2_2:11776308-11776327 None:intergenic 45.0%
TCAGGAAAGGAGCTGATGTT+AGG + chr2_2:11776313-11776332 Msa0238330:intron 45.0%
CAGGAAAGGAGCTGATGTTA+GGG + chr2_2:11776314-11776333 Msa0238330:intron 45.0%
AGGAAAGGAGCTGATGTTAG+GGG + chr2_2:11776315-11776334 Msa0238330:intron 45.0%
!! ATGTTAGGGGGTACTTTGCA+TGG + chr2_2:11776328-11776347 Msa0238330:CDS 45.0%
GACAACTTCGAGTGGTTACA+AGG + chr2_2:11776360-11776379 Msa0238330:CDS 45.0%
! GGCGGAAGACTTCTGTTTTA+TGG - chr2_2:11776482-11776501 None:intergenic 45.0%
AAGCTTAGCTGATTAGGACC+TGG - chr2_2:11776566-11776585 None:intergenic 45.0%
!! TATAAAATAATACTTATTAA+AGG + chr2_2:11772788-11772807 Msa0238330:intron 5.0%
!! ATAAAATAATACTTATTAAA+GGG + chr2_2:11772789-11772808 Msa0238330:intron 5.0%
!!! TAAGTAAATTTTTTTTTATA+GGG - chr2_2:11773705-11773724 None:intergenic 5.0%
!!! ATAAGTAAATTTTTTTTTAT+AGG - chr2_2:11773706-11773725 None:intergenic 5.0%
!! TACTTTAATTAAAAATAAAA+GGG - chr2_2:11774164-11774183 None:intergenic 5.0%
!! TTACTTTAATTAAAAATAAA+AGG - chr2_2:11774165-11774184 None:intergenic 5.0%
AGGCTGTTCCAAACTGAGGA+AGG - chr2_2:11772632-11772651 None:intergenic 50.0%
!!! GTGCGGAAACATTTTTGGCG+TGG - chr2_2:11772690-11772709 None:intergenic 50.0%
GCACACCATAGGACAGAAAG+TGG + chr2_2:11772706-11772725 Msa0238330:intron 50.0%
TCAGCCCACTTTCTGTCCTA+TGG - chr2_2:11772714-11772733 None:intergenic 50.0%
GAACTTGGAGACAGATACGG+AGG + chr2_2:11774382-11774401 Msa0238330:CDS 50.0%
TTGGAGACAGATACGGAGGT+TGG + chr2_2:11774386-11774405 Msa0238330:CDS 50.0%
ATCACATACGGCTACCGCAA+AGG + chr2_2:11774609-11774628 Msa0238330:CDS 50.0%
! ATGGCGGAGCTATTCCTTTG+CGG - chr2_2:11774626-11774645 None:intergenic 50.0%
AGAGAAGGAGCCATATCTGG+CGG + chr2_2:11774689-11774708 Msa0238330:CDS 50.0%
ATGCTGCAGCTGCATGAGAT+AGG - chr2_2:11774728-11774747 None:intergenic 50.0%
AATATTCAGGCCGAGCAAGG+TGG + chr2_2:11775110-11775129 Msa0238330:intron 50.0%
GCCGAGCAAGGTGGTAAAAT+TGG + chr2_2:11775119-11775138 Msa0238330:CDS 50.0%
GTCTGCCATGGAATTGCTGA+TGG - chr2_2:11775174-11775193 None:intergenic 50.0%
!!! GTTTTCAGGTTACGGCGAGT+TGG + chr2_2:11775970-11775989 Msa0238330:intron 50.0%
GGACAACCCAAATAACACCG+AGG + chr2_2:11775991-11776010 Msa0238330:CDS 50.0%
TGGGCATCTGTATTCCCTAC+TGG + chr2_2:11776054-11776073 Msa0238330:CDS 50.0%
CCTACCTTATGGCTTCCAGT+AGG - chr2_2:11776072-11776091 None:intergenic 50.0%
CCTACTGGAAGCCATAAGGT+AGG + chr2_2:11776069-11776088 Msa0238330:intron 50.0%
GGAAAGGAGCTGATGTTAGG+GGG + chr2_2:11776316-11776335 Msa0238330:intron 50.0%
TGTGGCCATCTTGTCTGCCA+TGG - chr2_2:11775186-11775205 None:intergenic 55.0%
TGGGTCCAAGAGCCTGCTTT+GGG - chr2_2:11775446-11775465 None:intergenic 55.0%
TTGGGTCCAAGAGCCTGCTT+TGG - chr2_2:11775447-11775466 None:intergenic 55.0%
CCAGGGATCACCAGAACAGA+GGG + chr2_2:11775637-11775656 Msa0238330:CDS 55.0%
CCACTCGAAGTTGTCGAGCA+AGG - chr2_2:11776355-11776374 None:intergenic 55.0%
CCTTGCTCGACAACTTCGAG+TGG + chr2_2:11776352-11776371 Msa0238330:CDS 55.0%
TCCAAATGTGAACCGGGGCC+AGG + chr2_2:11775619-11775638 Msa0238330:CDS 60.0%
CCAAATGTGAACCGGGGCCA+GGG + chr2_2:11775620-11775639 Msa0238330:CDS 60.0%
GCCAGGGATCACCAGAACAG+AGG + chr2_2:11775636-11775655 Msa0238330:CDS 60.0%
CCCTCTGTTCTGGTGATCCC+TGG - chr2_2:11775640-11775659 None:intergenic 60.0%
CCCTGGCCCCGGTTCACATT+TGG - chr2_2:11775623-11775642 None:intergenic 65.0%
GTTCTGGTGATCCCTGGCCC+CGG - chr2_2:11775634-11775653 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 11770844 11776669 11770844 ID=Msa0238330;Name=Msa0238330
chr2_2 mRNA 11770844 11776669 11770844 ID=Msa0238330-mRNA-1;Parent=Msa0238330;Name=Msa0238330-mRNA-1;_AED=0.10;_eAED=0.10;_QI=48|1|1|1|1|1|12|157|521
chr2_2 exon 11770844 11771056 11770844 ID=Msa0238330-mRNA-1:exon:5036;Parent=Msa0238330-mRNA-1
chr2_2 exon 11771215 11771284 11771215 ID=Msa0238330-mRNA-1:exon:5037;Parent=Msa0238330-mRNA-1
chr2_2 exon 11771365 11771423 11771365 ID=Msa0238330-mRNA-1:exon:5038;Parent=Msa0238330-mRNA-1
chr2_2 exon 11771670 11771745 11771670 ID=Msa0238330-mRNA-1:exon:5039;Parent=Msa0238330-mRNA-1
chr2_2 exon 11771836 11771910 11771836 ID=Msa0238330-mRNA-1:exon:5040;Parent=Msa0238330-mRNA-1
chr2_2 exon 11774338 11774425 11774338 ID=Msa0238330-mRNA-1:exon:5041;Parent=Msa0238330-mRNA-1
chr2_2 exon 11774518 11774770 11774518 ID=Msa0238330-mRNA-1:exon:5042;Parent=Msa0238330-mRNA-1
chr2_2 exon 11775119 11775234 11775119 ID=Msa0238330-mRNA-1:exon:5043;Parent=Msa0238330-mRNA-1
chr2_2 exon 11775453 11775708 11775453 ID=Msa0238330-mRNA-1:exon:5044;Parent=Msa0238330-mRNA-1
chr2_2 exon 11775805 11775907 11775805 ID=Msa0238330-mRNA-1:exon:5045;Parent=Msa0238330-mRNA-1
chr2_2 exon 11775978 11776086 11775978 ID=Msa0238330-mRNA-1:exon:5046;Parent=Msa0238330-mRNA-1
chr2_2 exon 11776317 11776669 11776317 ID=Msa0238330-mRNA-1:exon:5047;Parent=Msa0238330-mRNA-1
chr2_2 five_prime_UTR 11770844 11770891 11770844 ID=Msa0238330-mRNA-1:five_prime_utr;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11770892 11771056 11770892 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11771215 11771284 11771215 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11771365 11771423 11771365 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11771670 11771745 11771670 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11771836 11771910 11771836 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11774338 11774425 11774338 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11774518 11774770 11774518 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11775119 11775234 11775119 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11775453 11775708 11775453 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11775805 11775907 11775805 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11775978 11776086 11775978 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 CDS 11776317 11776512 11776317 ID=Msa0238330-mRNA-1:cds;Parent=Msa0238330-mRNA-1
chr2_2 three_prime_UTR 11776513 11776669 11776513 ID=Msa0238330-mRNA-1:three_prime_utr;Parent=Msa0238330-mRNA-1
Gene Sequence

>Msa0238330

ATGGTGTTCTATACAAATCTGAAATCGTTGTTTGTGGAAATACCCTTTATTTCTTTATTGCTAATCTCATTCTCAACATGTCCTCAAAGAGCTCTATCAAATAGCTTTGATCCATCTCCATTATCCACCAACTTCCTCTTTGGTACTGCTTCTTCTGCTTATCAGTATGAAGGTGCTTACTTGAGTGATGGAAAAGGACTAAGTGATTGGGATGTCTTAACACACAAAACACCAGATAAAATAAAGGATGGAAGTAATGGAGATATTGCCGTTGACCAATATCATCGCTATCTGGAGGATATTGATCTAATGGAAGCCATGAAAGTCAACAGCTACAGATTCTCAATTTCATGGGCAAGAGTTCTACCAAAAGGCAGATTTGGAGAAGTCAATTCTGGTGGCATCAATTACTACAATCGTCTAATAGATGCTTTGCTTCTCAAAGGAATTCAACCATTTGTAACACTGTCACATTTCGATTTACCTCAAGAACTTGGAGACAGATACGGAGGTTGGCTAAGTCCAGAGTCACAGGAAGATTTCGTATATCTAGCAGACCTTTGTTTCAAATCATTTGGTGACAGGGTAAAATACTGGGCAACCTTCAATGAGCCAGATTATCTGATCACATACGGCTACCGCAAAGGAATAGCTCCGCCATTTCGTTGCTCTAAACCATTTGGAAATTGTAGTGAAGGAGATTCAGAGAAGGAGCCATATCTGGCGGCTCACAATATAATCCTATCTCATGCAGCTGCAGCATATATTTATAGAACTAAATACCAGGCCGAGCAAGGTGGTAAAATTGGCATTGTCTTGCATTTTGACTGGTATGAACCCATCAGCAATTCCATGGCAGACAAGATGGCCACAGAAAGAGCAAGATCATTCACCAATAATTGGCTCTTGGACCCAATCATATTTGGTGAATACCCTCCAGTTATGCAGAAGATTCTAGGAGATATATTACCCAAATTTTCCAACAATAATAAAGAGAAACTGAAGAGTGGATTGGATTTTATTGGCATCAATCACTATGCAAGCTACTATATCAAGGACTGCATCTACTCCAAATGTGAACCGGGGCCAGGGATCACCAGAACAGAGGGTCTATTCCAACAGAGTGCAGAAAAAGATGGTGTTCCAATTGGCAAACCTACTTCAATTGATTGGCAATATGTTTATCCACAAGGCATGGAGAAAATTGTCACCTATCTAAAAAACAGATACAATAACACTCCAATGTTCATAACTGAAAACGGTTACGGCGAGTTGGACAACCCAAATAACACCGAGGAGCAATACCTTAATGATTTCGACAGAAAAAACTACATGGCTGGGCATCTGTATTCCCTACTGGAAGCCATAAGGAAAGGAGCTGATGTTAGGGGGTACTTTGCATGGTCCTTGCTCGACAACTTCGAGTGGTTACAAGGATATACAGTAAGATTTGGACTCCACCATGTTGATTATGCAACACTTAAAAGAACTCCAAGATTATCAGCAAATTGGTACAAGGAATTCATAGCAAACCATAAAACAGAAGTCTTCCGCCAAGAAAAATGA

Protein sequence

>Msa0238330

MVFYTNLKSLFVEIPFISLLLISFSTCPQRALSNSFDPSPLSTNFLFGTASSAYQYEGAYLSDGKGLSDWDVLTHKTPDKIKDGSNGDIAVDQYHRYLEDIDLMEAMKVNSYRFSISWARVLPKGRFGEVNSGGINYYNRLIDALLLKGIQPFVTLSHFDLPQELGDRYGGWLSPESQEDFVYLADLCFKSFGDRVKYWATFNEPDYLITYGYRKGIAPPFRCSKPFGNCSEGDSEKEPYLAAHNIILSHAAAAYIYRTKYQAEQGGKIGIVLHFDWYEPISNSMADKMATERARSFTNNWLLDPIIFGEYPPVMQKILGDILPKFSNNNKEKLKSGLDFIGINHYASYYIKDCIYSKCEPGPGITRTEGLFQQSAEKDGVPIGKPTSIDWQYVYPQGMEKIVTYLKNRYNNTPMFITENGYGELDNPNNTEEQYLNDFDRKNYMAGHLYSLLEAIRKGADVRGYFAWSLLDNFEWLQGYTVRFGLHHVDYATLKRTPRLSANWYKEFIANHKTEVFRQEK*