Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828910 | RHN53852.1 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828910 | sp|Q9LQL2|PTR14_ARATH | 73.710 | 601 | 148 | 3 | 1 | 598 | 1 | 594 | 0.0 | 924 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828910 | A0A396HKH9 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004940 | Msa0828910 | 0.827568 | 1.455701e-54 | -8.615850e-47 |
| Msa0004990 | Msa0828910 | 0.812922 | 3.322430e-51 | -8.615850e-47 |
| Msa0014280 | Msa0828910 | 0.803548 | 3.307922e-49 | -8.615850e-47 |
| Msa0044120 | Msa0828910 | 0.817940 | 2.540148e-52 | -8.615850e-47 |
| Msa0053040 | Msa0828910 | 0.815739 | 7.924052e-52 | -8.615850e-47 |
| Msa0095910 | Msa0828910 | 0.804194 | 2.428531e-49 | -8.615850e-47 |
| Msa0098380 | Msa0828910 | 0.822493 | 2.300551e-53 | -8.615850e-47 |
| Msa0107830 | Msa0828910 | 0.829397 | 5.268433e-55 | -8.615850e-47 |
| Msa0614960 | Msa0828910 | 0.810963 | 8.874499e-51 | -8.615850e-47 |
| Msa0629030 | Msa0828910 | 0.851047 | 1.144264e-60 | -8.615850e-47 |
| Msa0629040 | Msa0828910 | 0.803372 | 3.596742e-49 | -8.615850e-47 |
| Msa0651820 | Msa0828910 | 0.811399 | 7.137654e-51 | -8.615850e-47 |
| Msa0652590 | Msa0828910 | 0.827371 | 1.622997e-54 | -8.615850e-47 |
| Msa0655370 | Msa0828910 | 0.816933 | 4.282333e-52 | -8.615850e-47 |
| Msa0657260 | Msa0828910 | 0.823694 | 1.206877e-53 | -8.615850e-47 |
| Msa0666580 | Msa0828910 | 0.851714 | 7.414170e-61 | -8.615850e-47 |
| Msa0699170 | Msa0828910 | 0.813119 | 3.007071e-51 | -8.615850e-47 |
| Msa0701490 | Msa0828910 | 0.823891 | 1.084757e-53 | -8.615850e-47 |
| Msa0701560 | Msa0828910 | 0.824946 | 6.128459e-54 | -8.615850e-47 |
| Msa0716620 | Msa0828910 | 0.823731 | 1.182537e-53 | -8.615850e-47 |
| Msa0727230 | Msa0828910 | 0.811320 | 7.425723e-51 | -8.615850e-47 |
| Msa0728520 | Msa0828910 | 0.807657 | 4.542435e-50 | -8.615850e-47 |
| Msa0743370 | Msa0828910 | 0.809320 | 2.005892e-50 | -8.615850e-47 |
| Msa0744550 | Msa0828910 | 0.803316 | 3.694947e-49 | -8.615850e-47 |
| Msa0744560 | Msa0828910 | 0.804632 | 1.967900e-49 | -8.615850e-47 |
| Msa0744710 | Msa0828910 | 0.809532 | 1.806355e-50 | -8.615850e-47 |
| Msa0747710 | Msa0828910 | 0.820408 | 6.966914e-53 | -8.615850e-47 |
| Msa0749140 | Msa0828910 | 0.992074 | 3.716439e-191 | -8.615850e-47 |
| Msa0750790 | Msa0828910 | 0.834959 | 2.216287e-56 | -8.615850e-47 |
| Msa0750830 | Msa0828910 | 0.833796 | 4.340439e-56 | -8.615850e-47 |
| Msa0753410 | Msa0828910 | 0.823167 | 1.602261e-53 | -8.615850e-47 |
| Msa0772350 | Msa0828910 | 0.838521 | 2.736925e-57 | -8.615850e-47 |
| Msa0776540 | Msa0828910 | 0.805849 | 1.094619e-49 | -8.615850e-47 |
| Msa0777600 | Msa0828910 | 0.804599 | 1.999144e-49 | -8.615850e-47 |
| Msa0792890 | Msa0828910 | 0.998495 | 9.272731e-267 | -8.615850e-47 |
| Msa0793270 | Msa0828910 | 0.805692 | 1.180561e-49 | -8.615850e-47 |
| Msa0794200 | Msa0828910 | 0.838820 | 2.290922e-57 | -8.615850e-47 |
| Msa0794240 | Msa0828910 | 0.810526 | 1.103105e-50 | -8.615850e-47 |
| Msa0795320 | Msa0828910 | 0.838428 | 2.893022e-57 | -8.615850e-47 |
| Msa0795330 | Msa0828910 | 0.812420 | 4.277515e-51 | -8.615850e-47 |
| Msa0799110 | Msa0828910 | 0.806798 | 6.905185e-50 | -8.615850e-47 |
| Msa0799120 | Msa0828910 | 0.807319 | 5.355771e-50 | -8.615850e-47 |
| Msa0826240 | Msa0828910 | 0.815497 | 8.969928e-52 | -8.615850e-47 |
| Msa0826360 | Msa0828910 | 0.810490 | 1.123283e-50 | -8.615850e-47 |
| Msa0828910 | Msa0865830 | 0.816463 | 5.458561e-52 | -8.615850e-47 |
| Msa0828910 | Msa0874750 | 0.843087 | 1.737849e-58 | -8.615850e-47 |
| Msa0828910 | Msa0910560 | 0.828430 | 9.027725e-55 | -8.615850e-47 |
| Msa0828910 | Msa0910590 | 0.836600 | 8.512040e-57 | -8.615850e-47 |
| Msa0828910 | Msa0925940 | 0.800045 | 1.732918e-48 | -8.615850e-47 |
| Msa0828910 | Msa0948430 | 0.842421 | 2.613354e-58 | -8.615850e-47 |
| Msa0828910 | Msa0976400 | 0.858422 | 8.326365e-63 | -8.615850e-47 |
| Msa0828910 | Msa0985380 | 0.844929 | 5.573830e-59 | -8.615850e-47 |
| Msa0828910 | Msa1023430 | 0.849268 | 3.606999e-60 | -8.615850e-47 |
| Msa0828910 | Msa1030210 | 0.808401 | 3.153992e-50 | -8.615850e-47 |
| Msa0828910 | Msa1031060 | 0.807881 | 4.069968e-50 | -8.615850e-47 |
| Msa0828910 | Msa1035050 | 0.831538 | 1.577645e-55 | -8.615850e-47 |
| Msa0828910 | Msa1040330 | 0.804421 | 2.177389e-49 | -8.615850e-47 |
| Msa0828910 | Msa1061840 | 0.834607 | 2.718197e-56 | -8.615850e-47 |
| Msa0828910 | Msa1069250 | 0.822622 | 2.147053e-53 | -8.615850e-47 |
| Msa0828910 | Msa1071350 | 0.808866 | 2.508976e-50 | -8.615850e-47 |
| Msa0828910 | Msa1075090 | 0.818599 | 1.802016e-52 | -8.615850e-47 |
| Msa0828910 | Msa1085820 | 0.847956 | 8.329835e-60 | -8.615850e-47 |
| Msa0828910 | Msa1107220 | 0.804110 | 2.528460e-49 | -8.615850e-47 |
| Msa0828910 | Msa1107510 | 0.843249 | 1.573878e-58 | -8.615850e-47 |
| Msa0828910 | Msa1110900 | 0.818700 | 1.709153e-52 | -8.615850e-47 |
| Msa0828910 | Msa1115980 | 0.802214 | 6.238226e-49 | -8.615850e-47 |
| Msa0828910 | Msa1119670 | 0.805783 | 1.129672e-49 | -8.615850e-47 |
| Msa0828910 | Msa1131120 | 0.817639 | 2.970217e-52 | -8.615850e-47 |
| Msa0828910 | Msa1136630 | 0.801265 | 9.771148e-49 | -8.615850e-47 |
| Msa0828910 | Msa1137750 | 0.808154 | 3.560232e-50 | -8.615850e-47 |
| Msa0828910 | Msa1151070 | 0.838924 | 2.153860e-57 | -8.615850e-47 |
| Msa0828910 | Msa1185270 | 0.806547 | 7.800095e-50 | -8.615850e-47 |
| Msa0828910 | Msa1191270 | 0.804191 | 2.432228e-49 | -8.615850e-47 |
| Msa0828910 | Msa1202110 | 0.825219 | 5.281142e-54 | -8.615850e-47 |
| Msa0828910 | Msa1211610 | 0.804082 | 2.562589e-49 | -8.615850e-47 |
| Msa0828910 | Msa1235960 | -0.800626 | 1.319447e-48 | -8.615850e-47 |
| Msa0828910 | Msa1235990 | -0.802573 | 5.261382e-49 | -8.615850e-47 |
| Msa0828910 | Msa1239190 | 0.812209 | 4.757598e-51 | -8.615850e-47 |
| Msa0828910 | Msa1254870 | 0.824115 | 9.614834e-54 | -8.615850e-47 |
| Msa0828910 | Msa1262320 | 0.805801 | 1.119994e-49 | -8.615850e-47 |
| Msa0828910 | Msa1292560 | 0.807405 | 5.137405e-50 | -8.615850e-47 |
| Msa0828910 | Msa1328430 | 0.823274 | 1.513056e-53 | -8.615850e-47 |
| Msa0828910 | Msa1349420 | 0.813237 | 2.833305e-51 | -8.615850e-47 |
| Msa0828910 | Msa1364690 | 0.839114 | 1.923143e-57 | -8.615850e-47 |
| Msa0828910 | Msa1369720 | 0.828815 | 7.290322e-55 | -8.615850e-47 |
| Msa0828910 | Msa1398120 | 0.834373 | 3.112173e-56 | -8.615850e-47 |
| Msa0828910 | Msa1405040 | -0.805273 | 1.445569e-49 | -8.615850e-47 |
| Msa0828910 | Msa1437590 | 0.837792 | 4.217589e-57 | -8.615850e-47 |
| Msa0828910 | Msa1447140 | 0.810962 | 8.880381e-51 | -8.615850e-47 |
| Msa0828910 | Msa1453890 | 0.812634 | 3.841876e-51 | -8.615850e-47 |
| Msa0828910 | Msa1463640 | 0.801356 | 9.359516e-49 | -8.615850e-47 |
| Msa0129290 | Msa0828910 | 0.840186 | 1.011721e-57 | -8.615850e-47 |
| Msa0183730 | Msa0828910 | 0.812076 | 5.084293e-51 | -8.615850e-47 |
| Msa0186240 | Msa0828910 | 0.805116 | 1.559104e-49 | -8.615850e-47 |
| Msa0191470 | Msa0828910 | 0.814540 | 1.462677e-51 | -8.615850e-47 |
| Msa0196420 | Msa0828910 | 0.819065 | 1.412494e-52 | -8.615850e-47 |
| Msa0200090 | Msa0828910 | 0.832577 | 8.732540e-56 | -8.615850e-47 |
| Msa0238330 | Msa0828910 | 0.823739 | 1.177686e-53 | -8.615850e-47 |
| Msa0390200 | Msa0828910 | 0.826365 | 2.824318e-54 | -8.615850e-47 |
| Msa0400010 | Msa0828910 | 0.801584 | 8.405790e-49 | -8.615850e-47 |
| Msa0421080 | Msa0828910 | 0.808755 | 2.649725e-50 | -8.615850e-47 |
| Msa0433090 | Msa0828910 | 0.835524 | 1.596485e-56 | -8.615850e-47 |
| Msa0434910 | Msa0828910 | 0.800724 | 1.260423e-48 | -8.615850e-47 |
| Msa0459930 | Msa0828910 | 0.800820 | 1.204773e-48 | -8.615850e-47 |
| Msa0480550 | Msa0828910 | 0.800933 | 1.142200e-48 | -8.615850e-47 |
| Msa0242720 | Msa0828910 | 0.803235 | 3.839854e-49 | -8.615850e-47 |
| Msa0257760 | Msa0828910 | 0.803003 | 4.288145e-49 | -8.615850e-47 |
| Msa0267700 | Msa0828910 | 0.828873 | 7.055290e-55 | -8.615850e-47 |
| Msa0271700 | Msa0828910 | 0.838501 | 2.770343e-57 | -8.615850e-47 |
| Msa0271720 | Msa0828910 | 0.829144 | 6.066144e-55 | -8.615850e-47 |
| Msa0275730 | Msa0828910 | 0.824140 | 9.486468e-54 | -8.615850e-47 |
| Msa0310190 | Msa0828910 | 0.812740 | 3.642060e-51 | -8.615850e-47 |
| Msa0312300 | Msa0828910 | 0.811641 | 6.325772e-51 | -8.615850e-47 |
| Msa0320130 | Msa0828910 | 0.804700 | 1.904625e-49 | -8.615850e-47 |
| Msa0320140 | Msa0828910 | 0.811762 | 5.952006e-51 | -8.615850e-47 |
| Msa0324810 | Msa0828910 | 0.808039 | 3.766399e-50 | -8.615850e-47 |
| Msa0493870 | Msa0828910 | 0.809701 | 1.661124e-50 | -8.615850e-47 |
| Msa0510870 | Msa0828910 | 0.810159 | 1.323869e-50 | -8.615850e-47 |
| Msa0522170 | Msa0828910 | 0.803221 | 3.865296e-49 | -8.615850e-47 |
| Msa0524710 | Msa0828910 | 0.837278 | 5.712232e-57 | -8.615850e-47 |
| Msa0554770 | Msa0828910 | -0.804938 | 1.698799e-49 | -8.615850e-47 |
| Msa0561830 | Msa0828910 | 0.820861 | 5.483890e-53 | -8.615850e-47 |
| Msa0565120 | Msa0828910 | 0.814113 | 1.817612e-51 | -8.615850e-47 |
| Msa0588730 | Msa0828910 | 0.824888 | 6.323847e-54 | -8.615850e-47 |
| Msa0597820 | Msa0828910 | 0.811164 | 8.027594e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828910 | MtrunA17_Chr5g0400371 | 98.678 | 605 | 8 | 0 | 1 | 605 | 71 | 675 | 0.0 | 1238 |
| Msa0828910 | MtrunA17_Chr4g0054891 | 80.000 | 605 | 108 | 3 | 1 | 605 | 77 | 668 | 0.0 | 1003 |
| Msa0828910 | MtrunA17_Chr7g0217461 | 68.089 | 586 | 173 | 5 | 23 | 597 | 5 | 587 | 0.0 | 803 |
| Msa0828910 | MtrunA17_Chr1g0213711 | 59.310 | 580 | 221 | 8 | 20 | 599 | 4 | 568 | 0.0 | 685 |
| Msa0828910 | MtrunA17_Chr7g0214461 | 60.579 | 553 | 208 | 5 | 36 | 588 | 72 | 614 | 0.0 | 680 |
| Msa0828910 | MtrunA17_Chr7g0218851 | 59.720 | 571 | 213 | 7 | 36 | 599 | 40 | 600 | 0.0 | 659 |
| Msa0828910 | MtrunA17_Chr4g0011471 | 53.832 | 535 | 240 | 3 | 56 | 588 | 30 | 559 | 0.0 | 588 |
| Msa0828910 | MtrunA17_Chr4g0011041 | 47.595 | 582 | 298 | 4 | 10 | 588 | 4 | 581 | 0.0 | 548 |
| Msa0828910 | MtrunA17_Chr8g0375311 | 43.471 | 582 | 323 | 4 | 6 | 586 | 4 | 580 | 8.35e-178 | 516 |
| Msa0828910 | MtrunA17_Chr8g0375351 | 43.739 | 567 | 313 | 4 | 21 | 586 | 19 | 580 | 2.29e-169 | 494 |
| Msa0828910 | MtrunA17_Chr8g0375291 | 43.253 | 578 | 320 | 5 | 8 | 582 | 4 | 576 | 2.34e-169 | 494 |
| Msa0828910 | MtrunA17_Chr3g0104011 | 44.425 | 565 | 305 | 5 | 23 | 585 | 3 | 560 | 3.56e-169 | 493 |
| Msa0828910 | MtrunA17_Chr8g0375341 | 43.034 | 567 | 317 | 4 | 21 | 586 | 19 | 580 | 1.27e-168 | 493 |
| Msa0828910 | MtrunA17_Chr7g0241741 | 43.009 | 565 | 313 | 5 | 23 | 586 | 3 | 559 | 1.60e-163 | 479 |
| Msa0828910 | MtrunA17_Chr8g0375321 | 42.355 | 569 | 322 | 4 | 19 | 586 | 14 | 577 | 6.92e-163 | 478 |
| Msa0828910 | MtrunA17_Chr8g0375331 | 41.975 | 567 | 323 | 4 | 21 | 586 | 3 | 564 | 2.13e-159 | 468 |
| Msa0828910 | MtrunA17_Chr4g0005901 | 42.179 | 569 | 318 | 6 | 28 | 594 | 18 | 577 | 2.64e-159 | 468 |
| Msa0828910 | MtrunA17_Chr8g0375361 | 42.504 | 567 | 320 | 4 | 21 | 586 | 18 | 579 | 9.90e-148 | 439 |
| Msa0828910 | MtrunA17_Chr7g0261811 | 38.664 | 569 | 335 | 6 | 21 | 585 | 6 | 564 | 2.84e-143 | 428 |
| Msa0828910 | MtrunA17_Chr7g0261771 | 36.979 | 576 | 345 | 6 | 16 | 585 | 5 | 568 | 2.90e-141 | 423 |
| Msa0828910 | MtrunA17_Chr3g0142101 | 37.774 | 593 | 337 | 10 | 12 | 599 | 8 | 573 | 1.26e-139 | 418 |
| Msa0828910 | MtrunA17_Chr1g0187241 | 36.637 | 565 | 344 | 5 | 25 | 585 | 9 | 563 | 6.23e-139 | 417 |
| Msa0828910 | MtrunA17_Chr7g0261881 | 35.677 | 569 | 352 | 5 | 21 | 585 | 6 | 564 | 1.77e-137 | 413 |
| Msa0828910 | MtrunA17_Chr1g0166791 | 35.929 | 565 | 352 | 4 | 23 | 585 | 5 | 561 | 5.25e-134 | 404 |
| Msa0828910 | MtrunA17_Chr7g0261791 | 37.390 | 567 | 338 | 7 | 25 | 585 | 12 | 567 | 2.11e-131 | 397 |
| Msa0828910 | MtrunA17_Chr3g0142091 | 37.303 | 571 | 335 | 7 | 21 | 586 | 5 | 557 | 2.92e-131 | 396 |
| Msa0828910 | MtrunA17_Chr3g0112671 | 36.598 | 582 | 346 | 9 | 11 | 589 | 2 | 563 | 6.03e-131 | 395 |
| Msa0828910 | MtrunA17_Chr5g0399061 | 37.797 | 590 | 351 | 10 | 16 | 597 | 2 | 583 | 2.26e-130 | 394 |
| Msa0828910 | MtrunA17_Chr1g0166711 | 35.763 | 590 | 360 | 6 | 26 | 605 | 9 | 589 | 3.44e-129 | 392 |
| Msa0828910 | MtrunA17_Chr7g0261851 | 38.328 | 574 | 340 | 5 | 16 | 585 | 2 | 565 | 5.80e-128 | 389 |
| Msa0828910 | MtrunA17_Chr5g0399071 | 37.197 | 578 | 352 | 6 | 28 | 599 | 11 | 583 | 3.45e-127 | 386 |
| Msa0828910 | MtrunA17_Chr1g0166741 | 35.169 | 563 | 350 | 4 | 26 | 587 | 11 | 559 | 5.06e-126 | 383 |
| Msa0828910 | MtrunA17_Chr4g0063591 | 39.362 | 564 | 323 | 8 | 28 | 586 | 8 | 557 | 1.04e-122 | 374 |
| Msa0828910 | MtrunA17_Chr7g0240381 | 35.140 | 572 | 350 | 9 | 21 | 589 | 8 | 561 | 1.17e-122 | 374 |
| Msa0828910 | MtrunA17_Chr4g0008651 | 34.583 | 587 | 366 | 10 | 6 | 589 | 1 | 572 | 7.24e-122 | 373 |
| Msa0828910 | MtrunA17_Chr5g0422881 | 36.491 | 570 | 350 | 8 | 42 | 605 | 20 | 583 | 3.45e-121 | 371 |
| Msa0828910 | MtrunA17_Chr4g0056431 | 36.581 | 585 | 359 | 10 | 23 | 599 | 6 | 586 | 1.48e-120 | 369 |
| Msa0828910 | MtrunA17_Chr3g0112611 | 34.021 | 582 | 367 | 9 | 13 | 589 | 3 | 572 | 1.65e-119 | 367 |
| Msa0828910 | MtrunA17_Chr3g0114501 | 34.542 | 579 | 358 | 10 | 25 | 596 | 5 | 569 | 2.32e-116 | 358 |
| Msa0828910 | MtrunA17_Chr1g0166771 | 36.149 | 509 | 310 | 4 | 63 | 570 | 12 | 506 | 3.04e-116 | 357 |
| Msa0828910 | MtrunA17_Chr4g0059991 | 33.793 | 580 | 365 | 6 | 15 | 586 | 3 | 571 | 5.90e-116 | 358 |
| Msa0828910 | MtrunA17_Chr3g0077151 | 37.500 | 576 | 311 | 11 | 19 | 585 | 5 | 540 | 7.75e-115 | 353 |
| Msa0828910 | MtrunA17_Chr4g0014871 | 35.000 | 580 | 336 | 11 | 16 | 585 | 2 | 550 | 4.51e-113 | 349 |
| Msa0828910 | MtrunA17_Chr4g0014791 | 34.957 | 575 | 338 | 9 | 16 | 585 | 3 | 546 | 4.62e-111 | 343 |
| Msa0828910 | MtrunA17_Chr4g0014841 | 35.652 | 575 | 334 | 9 | 16 | 585 | 3 | 546 | 7.02e-111 | 343 |
| Msa0828910 | MtrunA17_Chr4g0059981 | 32.508 | 606 | 387 | 10 | 12 | 602 | 4 | 602 | 1.33e-110 | 344 |
| Msa0828910 | MtrunA17_Chr4g0059971 | 32.765 | 586 | 378 | 9 | 11 | 586 | 3 | 582 | 1.34e-110 | 343 |
| Msa0828910 | MtrunA17_Chr4g0014801 | 35.529 | 577 | 335 | 11 | 16 | 585 | 2 | 548 | 4.58e-109 | 338 |
| Msa0828910 | MtrunA17_Chr5g0415791 | 34.342 | 562 | 354 | 9 | 42 | 593 | 29 | 585 | 4.86e-109 | 340 |
| Msa0828910 | MtrunA17_Chr5g0439381 | 35.971 | 556 | 332 | 6 | 30 | 582 | 16 | 550 | 3.26e-108 | 337 |
| Msa0828910 | MtrunA17_Chr7g0255621 | 32.470 | 579 | 381 | 8 | 25 | 599 | 3 | 575 | 1.65e-107 | 336 |
| Msa0828910 | MtrunA17_Chr7g0255601 | 33.276 | 577 | 373 | 8 | 29 | 598 | 14 | 585 | 4.19e-107 | 335 |
| Msa0828910 | MtrunA17_Chr8g0362781 | 31.295 | 556 | 373 | 4 | 38 | 586 | 26 | 579 | 5.45e-105 | 329 |
| Msa0828910 | MtrunA17_Chr4g0014781 | 34.375 | 576 | 342 | 9 | 16 | 585 | 3 | 548 | 1.62e-103 | 324 |
| Msa0828910 | MtrunA17_Chr7g0261661 | 37.856 | 457 | 270 | 5 | 133 | 585 | 4 | 450 | 4.98e-103 | 321 |
| Msa0828910 | MtrunA17_Chr7g0214731 | 33.813 | 556 | 349 | 8 | 43 | 586 | 62 | 610 | 6.10e-103 | 325 |
| Msa0828910 | MtrunA17_Chr2g0276751 | 33.922 | 566 | 347 | 8 | 23 | 585 | 19 | 560 | 1.15e-102 | 323 |
| Msa0828910 | MtrunA17_Chr7g0261751 | 35.270 | 482 | 281 | 6 | 16 | 467 | 5 | 485 | 4.84e-102 | 319 |
| Msa0828910 | MtrunA17_Chr2g0284701 | 31.864 | 590 | 389 | 8 | 16 | 593 | 5 | 593 | 8.96e-102 | 321 |
| Msa0828910 | MtrunA17_Chr7g0255611 | 30.862 | 580 | 392 | 7 | 24 | 599 | 11 | 585 | 4.74e-101 | 319 |
| Msa0828910 | MtrunA17_Chr1g0193391 | 32.264 | 592 | 358 | 11 | 30 | 599 | 3 | 573 | 2.13e-100 | 317 |
| Msa0828910 | MtrunA17_Chr8g0353031 | 32.628 | 567 | 348 | 9 | 43 | 599 | 19 | 561 | 2.64e-100 | 316 |
| Msa0828910 | MtrunA17_Chr1g0166731 | 36.601 | 459 | 280 | 4 | 129 | 585 | 9 | 458 | 6.01e-97 | 304 |
| Msa0828910 | MtrunA17_Chr8g0362711 | 32.635 | 573 | 353 | 7 | 31 | 586 | 13 | 569 | 1.14e-95 | 304 |
| Msa0828910 | MtrunA17_Chr7g0271221 | 31.463 | 588 | 366 | 10 | 21 | 604 | 4 | 558 | 5.64e-95 | 303 |
| Msa0828910 | MtrunA17_Chr5g0415961 | 31.218 | 583 | 370 | 9 | 21 | 586 | 2 | 570 | 2.40e-93 | 298 |
| Msa0828910 | MtrunA17_Chr4g0069581 | 34.528 | 530 | 326 | 9 | 60 | 586 | 4 | 515 | 5.11e-93 | 297 |
| Msa0828910 | MtrunA17_Chr3g0133341 | 29.840 | 563 | 373 | 7 | 38 | 594 | 10 | 556 | 3.75e-92 | 295 |
| Msa0828910 | MtrunA17_Chr8g0379971 | 32.060 | 602 | 380 | 9 | 24 | 598 | 2 | 601 | 1.65e-91 | 294 |
| Msa0828910 | MtrunA17_Chr7g0261731 | 38.244 | 353 | 207 | 2 | 16 | 366 | 5 | 348 | 8.36e-91 | 284 |
| Msa0828910 | MtrunA17_Chr4g0060001 | 30.756 | 569 | 380 | 8 | 16 | 578 | 2 | 562 | 2.62e-90 | 291 |
| Msa0828910 | MtrunA17_Chr7g0240271 | 28.814 | 590 | 405 | 8 | 15 | 599 | 2 | 581 | 1.08e-88 | 286 |
| Msa0828910 | MtrunA17_Chr1g0157601 | 30.855 | 538 | 355 | 9 | 54 | 585 | 27 | 553 | 3.29e-86 | 279 |
| Msa0828910 | MtrunA17_Chr8g0390331 | 29.837 | 553 | 375 | 7 | 41 | 589 | 14 | 557 | 5.61e-86 | 279 |
| Msa0828910 | MtrunA17_Chr4g0014861 | 35.581 | 430 | 255 | 7 | 161 | 585 | 13 | 425 | 6.28e-86 | 274 |
| Msa0828910 | MtrunA17_Chr8g0362801 | 32.974 | 464 | 299 | 9 | 130 | 586 | 1 | 459 | 1.32e-83 | 270 |
| Msa0828910 | MtrunA17_Chr3g0082631 | 34.763 | 443 | 270 | 8 | 164 | 593 | 30 | 466 | 1.36e-83 | 270 |
| Msa0828910 | MtrunA17_Chr1g0157611 | 30.442 | 565 | 376 | 8 | 41 | 599 | 15 | 568 | 4.86e-82 | 268 |
| Msa0828910 | MtrunA17_Chr2g0331511 | 28.623 | 552 | 380 | 9 | 54 | 598 | 33 | 577 | 4.65e-80 | 265 |
| Msa0828910 | MtrunA17_Chr1g0177591 | 29.210 | 582 | 376 | 13 | 14 | 585 | 9 | 564 | 1.94e-79 | 261 |
| Msa0828910 | MtrunA17_Chr1g0157621 | 29.128 | 539 | 367 | 7 | 63 | 599 | 1 | 526 | 1.88e-78 | 258 |
| Msa0828910 | MtrunA17_Chr5g0415841 | 30.388 | 464 | 309 | 7 | 130 | 586 | 1 | 457 | 4.93e-78 | 254 |
| Msa0828910 | MtrunA17_Chr1g0147631 | 28.715 | 599 | 398 | 14 | 16 | 601 | 2 | 584 | 1.26e-77 | 257 |
| Msa0828910 | MtrunA17_Chr4g0003761 | 28.188 | 596 | 408 | 12 | 10 | 599 | 2 | 583 | 1.45e-77 | 257 |
| Msa0828910 | MtrunA17_Chr7g0235521 | 30.303 | 462 | 312 | 7 | 142 | 598 | 13 | 469 | 1.40e-76 | 251 |
| Msa0828910 | MtrunA17_Chr7g0240281 | 28.214 | 599 | 410 | 10 | 16 | 604 | 3 | 591 | 2.75e-76 | 254 |
| Msa0828910 | MtrunA17_Chr7g0240131 | 30.087 | 462 | 313 | 7 | 142 | 598 | 13 | 469 | 3.02e-75 | 248 |
| Msa0828910 | MtrunA17_Chr8g0379991 | 31.779 | 579 | 350 | 11 | 60 | 598 | 1 | 574 | 5.21e-75 | 250 |
| Msa0828910 | MtrunA17_Chr2g0331481 | 27.978 | 554 | 386 | 8 | 54 | 602 | 37 | 582 | 1.60e-74 | 250 |
| Msa0828910 | MtrunA17_Chr7g0240181 | 29.870 | 462 | 314 | 7 | 142 | 598 | 13 | 469 | 3.21e-74 | 245 |
| Msa0828910 | MtrunA17_Chr7g0240211 | 29.870 | 462 | 314 | 7 | 142 | 598 | 13 | 469 | 3.64e-74 | 245 |
| Msa0828910 | MtrunA17_Chr2g0331521 | 26.773 | 564 | 398 | 9 | 42 | 599 | 22 | 576 | 1.96e-72 | 243 |
| Msa0828910 | MtrunA17_Chr2g0331471 | 27.428 | 587 | 409 | 9 | 25 | 602 | 67 | 645 | 2.02e-72 | 246 |
| Msa0828910 | MtrunA17_Chr2g0325951 | 30.212 | 566 | 366 | 11 | 29 | 586 | 1 | 545 | 3.25e-71 | 239 |
| Msa0828910 | MtrunA17_Chr1g0177611 | 31.556 | 450 | 280 | 11 | 141 | 585 | 9 | 435 | 9.14e-71 | 235 |
| Msa0828910 | MtrunA17_Chr6g0451841 | 29.130 | 563 | 343 | 11 | 44 | 585 | 6 | 533 | 1.10e-70 | 237 |
| Msa0828910 | MtrunA17_Chr2g0325961 | 30.159 | 567 | 366 | 10 | 29 | 586 | 1 | 546 | 2.22e-69 | 234 |
| Msa0828910 | MtrunA17_Chr7g0240151 | 29.004 | 462 | 300 | 8 | 142 | 598 | 13 | 451 | 9.24e-68 | 228 |
| Msa0828910 | MtrunA17_Chr2g0326211 | 29.145 | 573 | 363 | 11 | 29 | 586 | 1 | 545 | 1.11e-67 | 229 |
| Msa0828910 | MtrunA17_Chr2g0331461 | 29.084 | 557 | 377 | 8 | 54 | 602 | 37 | 583 | 9.94e-66 | 226 |
| Msa0828910 | MtrunA17_Chr3g0142111 | 36.538 | 312 | 189 | 3 | 16 | 323 | 20 | 326 | 1.36e-65 | 218 |
| Msa0828910 | MtrunA17_Chr1g0177631 | 30.512 | 449 | 286 | 11 | 141 | 585 | 9 | 435 | 2.82e-65 | 220 |
| Msa0828910 | MtrunA17_Chr3g0112631 | 36.201 | 279 | 167 | 6 | 316 | 589 | 3 | 275 | 2.54e-59 | 200 |
| Msa0828910 | MtrunA17_Chr3g0142121 | 36.972 | 284 | 159 | 6 | 317 | 599 | 11 | 275 | 3.40e-57 | 194 |
| Msa0828910 | MtrunA17_Chr7g0234381 | 31.787 | 431 | 259 | 9 | 156 | 585 | 22 | 418 | 1.41e-50 | 180 |
| Msa0828910 | MtrunA17_Chr7g0234151 | 31.494 | 435 | 255 | 10 | 156 | 585 | 22 | 418 | 1.99e-50 | 180 |
| Msa0828910 | MtrunA17_Chr4g0060071 | 31.379 | 290 | 183 | 6 | 299 | 586 | 21 | 296 | 9.08e-45 | 161 |
| Msa0828910 | MtrunA17_Chr7g0234181 | 29.698 | 431 | 268 | 10 | 156 | 585 | 17 | 413 | 2.53e-44 | 163 |
| Msa0828910 | MtrunA17_Chr7g0261721 | 35.354 | 198 | 122 | 3 | 391 | 585 | 4 | 198 | 1.27e-34 | 131 |
| Msa0828910 | MtrunA17_Chr3g0112651 | 34.921 | 189 | 117 | 3 | 129 | 317 | 21 | 203 | 1.46e-31 | 122 |
| Msa0828910 | MtrunA17_Chr1g0147591 | 28.351 | 194 | 130 | 3 | 171 | 361 | 9 | 196 | 1.07e-29 | 116 |
| Msa0828910 | MtrunA17_Chr7g0261671 | 40.541 | 111 | 66 | 0 | 16 | 126 | 6 | 116 | 9.06e-25 | 99.8 |
| Msa0828910 | MtrunA17_Chr7g0261831 | 33.544 | 158 | 94 | 4 | 273 | 428 | 3 | 151 | 2.09e-21 | 93.2 |
| Msa0828910 | MtrunA17_Chr4g0014851 | 41.000 | 100 | 59 | 0 | 29 | 128 | 17 | 116 | 3.31e-20 | 88.2 |
| Msa0828910 | MtrunA17_Chr2g0326221 | 29.515 | 227 | 130 | 6 | 361 | 586 | 24 | 221 | 8.56e-20 | 88.6 |
| Msa0828910 | MtrunA17_Chr1g0166721 | 33.654 | 104 | 69 | 0 | 25 | 128 | 8 | 111 | 2.79e-19 | 84.7 |
| Msa0828910 | MtrunA17_Chr4g0060061 | 33.600 | 125 | 78 | 1 | 150 | 274 | 9 | 128 | 2.83e-18 | 81.6 |
| Msa0828910 | MtrunA17_Chr3g0112661 | 41.379 | 87 | 51 | 0 | 30 | 116 | 19 | 105 | 5.63e-17 | 77.8 |
| Msa0828910 | MtrunA17_Chr3g0082621 | 41.538 | 65 | 38 | 0 | 64 | 128 | 8 | 72 | 1.35e-12 | 63.9 |
| Msa0828910 | MtrunA17_Chr8g0382591 | 32.710 | 107 | 70 | 2 | 316 | 420 | 3 | 109 | 1.53e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0828910 | AT1G32450.1 | 73.710 | 601 | 148 | 3 | 1 | 598 | 1 | 594 | 0.0 | 924 |
| Msa0828910 | AT4G21680.1 | 68.366 | 569 | 173 | 4 | 25 | 589 | 9 | 574 | 0.0 | 793 |
| Msa0828910 | AT5G19640.1 | 56.610 | 590 | 235 | 5 | 16 | 604 | 31 | 600 | 0.0 | 670 |
| Msa0828910 | AT3G54140.1 | 43.717 | 565 | 311 | 5 | 23 | 586 | 3 | 561 | 2.19e-172 | 502 |
| Msa0828910 | AT3G54140.2 | 43.717 | 565 | 311 | 5 | 23 | 586 | 3 | 561 | 2.19e-172 | 502 |
| Msa0828910 | AT2G02040.1 | 43.548 | 558 | 309 | 4 | 30 | 586 | 27 | 579 | 1.08e-168 | 493 |
| Msa0828910 | AT1G62200.1 | 42.123 | 584 | 325 | 7 | 6 | 586 | 13 | 586 | 2.67e-164 | 482 |
| Msa0828910 | AT1G62200.2 | 40.131 | 613 | 325 | 8 | 6 | 586 | 13 | 615 | 1.11e-157 | 466 |
| Msa0828910 | AT1G62200.3 | 40.131 | 613 | 325 | 8 | 6 | 586 | 27 | 629 | 1.75e-157 | 466 |
| Msa0828910 | AT5G01180.2 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0828910 | AT5G01180.3 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0828910 | AT5G01180.1 | 39.929 | 566 | 332 | 5 | 21 | 585 | 2 | 560 | 6.08e-157 | 462 |
| Msa0828910 | AT2G02020.1 | 38.869 | 566 | 299 | 7 | 16 | 579 | 14 | 534 | 4.16e-139 | 416 |
| Msa0828910 | AT2G26690.1 | 36.897 | 580 | 351 | 7 | 28 | 605 | 8 | 574 | 1.47e-125 | 382 |
| Msa0828910 | AT5G46050.1 | 35.501 | 569 | 352 | 7 | 21 | 585 | 4 | 561 | 6.02e-125 | 380 |
| Msa0828910 | AT5G46040.1 | 35.026 | 571 | 354 | 9 | 21 | 586 | 4 | 562 | 1.06e-122 | 375 |
| Msa0828910 | AT3G54450.1 | 35.915 | 568 | 331 | 10 | 42 | 599 | 11 | 555 | 8.16e-121 | 369 |
| Msa0828910 | AT1G12110.1 | 37.119 | 590 | 351 | 10 | 21 | 600 | 5 | 584 | 5.01e-120 | 368 |
| Msa0828910 | AT3G53960.1 | 34.256 | 578 | 366 | 9 | 16 | 589 | 9 | 576 | 2.20e-117 | 362 |
| Msa0828910 | AT2G02020.2 | 35.866 | 566 | 295 | 9 | 16 | 579 | 14 | 513 | 5.99e-117 | 358 |
| Msa0828910 | AT2G37900.1 | 33.333 | 573 | 364 | 7 | 19 | 589 | 13 | 569 | 6.04e-117 | 360 |
| Msa0828910 | AT2G26690.2 | 36.727 | 550 | 333 | 7 | 58 | 605 | 5 | 541 | 3.29e-116 | 357 |
| Msa0828910 | AT2G26690.3 | 37.153 | 541 | 325 | 7 | 67 | 605 | 2 | 529 | 4.58e-116 | 356 |
| Msa0828910 | AT2G40460.1 | 35.626 | 567 | 340 | 10 | 28 | 587 | 8 | 556 | 1.08e-112 | 349 |
| Msa0828910 | AT1G69870.1 | 33.157 | 567 | 367 | 8 | 41 | 599 | 48 | 610 | 1.90e-112 | 350 |
| Msa0828910 | AT5G13400.1 | 34.043 | 564 | 356 | 7 | 33 | 586 | 52 | 609 | 1.19e-108 | 340 |
| Msa0828910 | AT1G59740.1 | 34.775 | 601 | 361 | 12 | 7 | 597 | 3 | 582 | 2.06e-108 | 338 |
| Msa0828910 | AT1G68570.1 | 34.790 | 595 | 364 | 13 | 15 | 600 | 2 | 581 | 2.37e-107 | 335 |
| Msa0828910 | AT1G68570.2 | 35.443 | 553 | 341 | 10 | 57 | 600 | 6 | 551 | 2.14e-105 | 330 |
| Msa0828910 | AT1G72140.1 | 34.159 | 565 | 324 | 8 | 32 | 585 | 22 | 549 | 3.45e-103 | 323 |
| Msa0828910 | AT1G33440.1 | 36.077 | 571 | 335 | 10 | 24 | 585 | 18 | 567 | 8.12e-102 | 321 |
| Msa0828910 | AT1G18880.1 | 32.264 | 561 | 365 | 9 | 48 | 599 | 23 | 577 | 1.18e-100 | 318 |
| Msa0828910 | AT1G72125.1 | 33.913 | 575 | 349 | 9 | 18 | 585 | 3 | 553 | 1.28e-100 | 317 |
| Msa0828910 | AT1G27080.1 | 33.512 | 561 | 353 | 10 | 44 | 599 | 14 | 559 | 1.33e-100 | 317 |
| Msa0828910 | AT2G37900.2 | 33.267 | 505 | 319 | 7 | 87 | 589 | 2 | 490 | 4.93e-100 | 313 |
| Msa0828910 | AT3G21670.1 | 34.286 | 560 | 342 | 7 | 30 | 582 | 12 | 552 | 7.34e-100 | 316 |
| Msa0828910 | AT1G22540.1 | 32.979 | 564 | 346 | 8 | 32 | 590 | 18 | 554 | 2.11e-97 | 308 |
| Msa0828910 | AT5G46050.2 | 36.304 | 460 | 278 | 7 | 130 | 585 | 1 | 449 | 4.08e-97 | 305 |
| Msa0828910 | AT1G72120.1 | 33.043 | 575 | 350 | 9 | 18 | 585 | 3 | 549 | 1.99e-96 | 306 |
| Msa0828910 | AT1G72130.1 | 34.909 | 550 | 304 | 9 | 45 | 585 | 26 | 530 | 3.11e-96 | 305 |
| Msa0828910 | AT5G62680.1 | 32.182 | 550 | 356 | 9 | 48 | 586 | 47 | 590 | 6.03e-96 | 306 |
| Msa0828910 | AT3G47960.1 | 31.145 | 594 | 375 | 11 | 4 | 586 | 36 | 606 | 3.72e-95 | 305 |
| Msa0828910 | AT1G27080.2 | 33.083 | 532 | 336 | 10 | 73 | 599 | 1 | 517 | 1.83e-93 | 298 |
| Msa0828910 | AT1G22550.1 | 32.702 | 581 | 348 | 10 | 19 | 585 | 5 | 556 | 1.17e-90 | 291 |
| Msa0828910 | AT1G22570.1 | 33.214 | 557 | 340 | 10 | 19 | 566 | 5 | 538 | 1.05e-89 | 288 |
| Msa0828910 | AT1G69850.1 | 30.324 | 587 | 391 | 8 | 21 | 593 | 2 | 584 | 4.78e-87 | 282 |
| Msa0828910 | AT5G62730.1 | 30.835 | 587 | 356 | 12 | 17 | 585 | 28 | 582 | 5.86e-87 | 282 |
| Msa0828910 | AT1G22570.2 | 33.984 | 512 | 306 | 10 | 64 | 566 | 13 | 501 | 2.16e-84 | 273 |
| Msa0828910 | AT1G27040.1 | 29.381 | 565 | 383 | 6 | 30 | 591 | 13 | 564 | 5.68e-83 | 271 |
| Msa0828910 | AT1G27040.2 | 29.381 | 565 | 383 | 6 | 30 | 591 | 9 | 560 | 7.13e-83 | 271 |
| Msa0828910 | AT1G52190.1 | 28.419 | 563 | 376 | 10 | 41 | 585 | 13 | 566 | 2.67e-81 | 268 |
| Msa0828910 | AT5G62730.2 | 30.741 | 553 | 334 | 11 | 50 | 585 | 3 | 523 | 6.53e-81 | 265 |
| Msa0828910 | AT3G45720.1 | 28.731 | 536 | 355 | 7 | 66 | 598 | 41 | 552 | 1.83e-80 | 264 |
| Msa0828910 | AT3G16180.1 | 29.451 | 601 | 391 | 14 | 16 | 599 | 2 | 586 | 6.69e-80 | 263 |
| Msa0828910 | AT3G45650.1 | 29.138 | 580 | 376 | 11 | 24 | 599 | 2 | 550 | 2.83e-79 | 261 |
| Msa0828910 | AT3G45680.1 | 28.897 | 571 | 378 | 9 | 30 | 598 | 8 | 552 | 5.10e-79 | 260 |
| Msa0828910 | AT3G45710.1 | 29.264 | 557 | 369 | 7 | 44 | 598 | 21 | 554 | 9.74e-79 | 259 |
| Msa0828910 | AT1G27040.3 | 29.609 | 537 | 362 | 6 | 58 | 591 | 9 | 532 | 5.59e-78 | 257 |
| Msa0828910 | AT5G14940.1 | 29.359 | 562 | 329 | 15 | 64 | 599 | 27 | 546 | 1.23e-76 | 254 |
| Msa0828910 | AT1G72130.2 | 34.234 | 444 | 248 | 7 | 151 | 585 | 4 | 412 | 5.06e-75 | 246 |
| Msa0828910 | AT1G72130.3 | 34.234 | 444 | 248 | 7 | 151 | 585 | 4 | 412 | 5.06e-75 | 246 |
| Msa0828910 | AT3G45660.1 | 29.020 | 541 | 353 | 10 | 62 | 598 | 39 | 552 | 8.29e-75 | 249 |
| Msa0828910 | AT3G45660.3 | 29.020 | 541 | 353 | 10 | 62 | 598 | 39 | 552 | 8.29e-75 | 249 |
| Msa0828910 | AT3G45650.2 | 28.053 | 606 | 375 | 12 | 24 | 599 | 2 | 576 | 1.23e-74 | 249 |
| Msa0828910 | AT3G45660.2 | 29.020 | 541 | 353 | 10 | 62 | 598 | 60 | 573 | 1.31e-74 | 249 |
| Msa0828910 | AT5G28470.2 | 27.687 | 549 | 388 | 5 | 41 | 587 | 14 | 555 | 1.99e-74 | 248 |
| Msa0828910 | AT1G69860.1 | 30.459 | 545 | 354 | 11 | 48 | 586 | 22 | 547 | 5.08e-74 | 247 |
| Msa0828910 | AT3G45700.1 | 27.599 | 558 | 372 | 8 | 43 | 598 | 15 | 542 | 4.62e-72 | 241 |
| Msa0828910 | AT5G28470.1 | 27.505 | 549 | 387 | 6 | 41 | 587 | 14 | 553 | 1.49e-71 | 241 |
| Msa0828910 | AT3G25260.1 | 27.828 | 557 | 345 | 11 | 34 | 585 | 11 | 515 | 7.46e-67 | 227 |
| Msa0828910 | AT3G01350.1 | 27.778 | 558 | 354 | 12 | 64 | 596 | 27 | 560 | 3.07e-65 | 224 |
| Msa0828910 | AT3G45690.1 | 26.297 | 559 | 347 | 10 | 43 | 600 | 17 | 511 | 2.91e-63 | 217 |
| Msa0828910 | AT3G25280.1 | 26.655 | 574 | 362 | 14 | 17 | 585 | 2 | 521 | 7.03e-57 | 200 |
| Msa0828910 | AT2G38100.1 | 23.993 | 546 | 368 | 16 | 62 | 599 | 9 | 515 | 1.57e-33 | 135 |
| Msa0828910 | AT2G38100.3 | 23.993 | 546 | 368 | 16 | 62 | 599 | 15 | 521 | 1.74e-33 | 135 |
| Msa0828910 | AT2G38100.2 | 23.881 | 536 | 362 | 15 | 72 | 599 | 2 | 499 | 1.80e-33 | 134 |
| Msa0828910 | AT5G11570.1 | 30.000 | 250 | 163 | 5 | 338 | 585 | 237 | 476 | 1.41e-29 | 122 |
| Msa0828910 | AT5G11570.1 | 30.093 | 216 | 144 | 4 | 54 | 266 | 23 | 234 | 3.08e-22 | 100 |
Find 161 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTGGAACAGGCGCCTTTC+TGG | 0.168501 | 5_4:+1839116 | None:intergenic |
| TAAAACATGTGCTGTCTTTC+AGG | 0.175129 | 5_4:-1840076 | Msa0828910:CDS |
| CTTTCCTAAGTGACTCTTAT+TGG | 0.215786 | 5_4:-1840107 | Msa0828910:CDS |
| ACTTCTTCAACTTGACTTAC+AGG | 0.233280 | 5_4:+1839079 | None:intergenic |
| TACTGAGACTCCTTCCAATT+TGG | 0.238205 | 5_4:-1839048 | Msa0828910:CDS |
| CTGGACTAGTTGAATGTTAT+AGG | 0.257127 | 5_4:-1838751 | Msa0828910:CDS |
| GAATGTGGGCTCTTGGCTTC+TGG | 0.265662 | 5_4:-1839626 | Msa0828910:CDS |
| TTTCCTAAGTGACTCTTATT+GGG | 0.274400 | 5_4:-1840106 | Msa0828910:CDS |
| AGCTGACCATCTTCCAGATT+TGG | 0.275707 | 5_4:+1843261 | None:intergenic |
| CCAGATTTGGCTCTTATTGC+AGG | 0.276985 | 5_4:+1843274 | None:intergenic |
| TGACCTTTATTGAGGTTTAC+TGG | 0.278086 | 5_4:+1838455 | None:intergenic |
| ATCCCTCAGTATGCACTTAT+AGG | 0.280570 | 5_4:-1838662 | Msa0828910:CDS |
| CTTTGCAGTGGCGGCAGTCT+TGG | 0.311213 | 5_4:+1838714 | None:intergenic |
| GATTCATTCCCACAACCTTT+AGG | 0.315220 | 5_4:+1839888 | None:intergenic |
| TCTACCTAGCTTTGAACTTT+GGG | 0.317823 | 5_4:-1839692 | Msa0828910:CDS |
| CGAGTACTTTGAGCATCTTC+TGG | 0.327628 | 5_4:-1838688 | Msa0828910:CDS |
| CCACTTTGCACATGCAATAT+AGG | 0.335349 | 5_4:+1838379 | None:intergenic |
| TTCTACCTAGCTTTGAACTT+TGG | 0.355047 | 5_4:-1839693 | Msa0828910:CDS |
| GAAAACCACCGAGTATATTA+TGG | 0.363778 | 5_4:+1839018 | None:intergenic |
| CTTGGCTTCTGGCTGTCTGC+AGG | 0.364129 | 5_4:-1839615 | Msa0828910:CDS |
| CAACCGAATATTGCCACATT+CGG | 0.367343 | 5_4:-1839780 | Msa0828910:CDS |
| CAACTATGTAAGTAGCTTAC+TGG | 0.367530 | 5_4:-1838528 | Msa0828910:CDS |
| TCAATAAAGGTCACCTAGAT+AGG | 0.368292 | 5_4:-1838445 | Msa0828910:CDS |
| AAACAATATCAGTGCGATAA+AGG | 0.368557 | 5_4:+1839587 | None:intergenic |
| TCAGAAGAATTGACTCTAGA+TGG | 0.370202 | 5_4:-1843319 | Msa0828910:CDS |
| TCGATCTATCTCATTGCCTT+GGG | 0.371691 | 5_4:-1839816 | Msa0828910:CDS |
| GCACTGATATTGTTTCTTGT+TGG | 0.378724 | 5_4:-1839579 | Msa0828910:CDS |
| ATTATGGTGCAGAGCCAAAT+TGG | 0.381296 | 5_4:+1839034 | None:intergenic |
| TTTGTTGTGATGAAGGTTCT+TGG | 0.383790 | 5_4:-1839176 | Msa0828910:intron |
| AACCGAATATTGCCACATTC+GGG | 0.389216 | 5_4:-1839779 | Msa0828910:CDS |
| TTGATTAAACCTAAAGGTTG+TGG | 0.389825 | 5_4:-1839897 | Msa0828910:CDS |
| TACATAGTTGCCGAGGGAAA+TGG | 0.392484 | 5_4:+1838541 | None:intergenic |
| GCCCCGAATGTGGCAATATT+CGG | 0.395016 | 5_4:+1839777 | None:intergenic |
| TACAAGTCATCTCCATTTGA+TGG | 0.396660 | 5_4:+1839459 | None:intergenic |
| CCAGATGGCTTAAAGAGTTT+CGG | 0.398986 | 5_4:-1838584 | Msa0828910:CDS |
| CCGAAACTCTTTAAGCCATC+TGG | 0.412448 | 5_4:+1838584 | None:intergenic |
| CTCGATCTATCTCATTGCCT+TGG | 0.417455 | 5_4:-1839817 | Msa0828910:CDS |
| GATGGAAGTGTTGATTTCAA+TGG | 0.424543 | 5_4:-1843301 | Msa0828910:CDS |
| TGATTAAACCTAAAGGTTGT+GGG | 0.432667 | 5_4:-1839896 | Msa0828910:CDS |
| CCATTTGCTCACATTGTTAG+CGG | 0.435931 | 5_4:+1840164 | None:intergenic |
| TTTGTCCTACCACCCTTGTC+AGG | 0.440304 | 5_4:+1840199 | None:intergenic |
| AAAGTTGAAATGCCATCAAA+TGG | 0.443101 | 5_4:-1839471 | Msa0828910:CDS |
| CCTGCAATAAGAGCCAAATC+TGG | 0.443888 | 5_4:-1843274 | Msa0828910:CDS |
| GAGACGCCATGGGTTGGAAC+AGG | 0.445766 | 5_4:+1839105 | None:intergenic |
| CACCATTCTCGTCTATTTCG+AGG | 0.447297 | 5_4:-1839655 | Msa0828910:CDS |
| AGAGGAAGTAAAACCTATCT+AGG | 0.447626 | 5_4:+1838432 | None:intergenic |
| CTCTTCTTGATTAAACCTAA+AGG | 0.452670 | 5_4:-1839903 | Msa0828910:CDS |
| TTGATGCAGCAACAAGGACT+TGG | 0.457746 | 5_4:+1839502 | None:intergenic |
| CTCGTCTATTTCGAGGATGA+AGG | 0.458526 | 5_4:-1839648 | Msa0828910:CDS |
| TATCTCATTGCCTTGGGGAA+TGG | 0.461561 | 5_4:-1839810 | Msa0828910:CDS |
| ATGTGGAAAACATTCAAGTT+GGG | 0.461991 | 5_4:-1839859 | Msa0828910:CDS |
| CTGAGGTGTTTATGTATGTA+GGG | 0.463211 | 5_4:-1838634 | Msa0828910:CDS |
| GATGAAGGAATGTGGGCTCT+TGG | 0.464285 | 5_4:-1839633 | Msa0828910:CDS |
| GAACCAATGTCTGGCAACTC+TGG | 0.466451 | 5_4:-1840256 | Msa0828910:CDS |
| TCTACGGAGGATCACATGCC+GGG | 0.468350 | 5_4:-1838485 | Msa0828910:CDS |
| CCGCTAACAATGTGAGCAAA+TGG | 0.471071 | 5_4:-1840164 | Msa0828910:CDS |
| TCTGAGGTGTTTATGTATGT+AGG | 0.471453 | 5_4:-1838635 | Msa0828910:CDS |
| GTCCGACTCTAAGGGACTTA+CGG | 0.471843 | 5_4:-1838828 | Msa0828910:CDS |
| TCGAATTCTCGATCCATTTG+TGG | 0.474043 | 5_4:-1838864 | Msa0828910:CDS |
| CCTGGCAAGAGGGTTGCCAC+TGG | 0.476047 | 5_4:+1839530 | None:intergenic |
| AATGTGGAAAACATTCAAGT+TGG | 0.478518 | 5_4:-1839860 | Msa0828910:CDS |
| ACTTACGGAGCTTCAGAGAA+TGG | 0.483312 | 5_4:-1838813 | Msa0828910:CDS |
| TATCTAGGTGACCTTTATTG+AGG | 0.485934 | 5_4:+1838447 | None:intergenic |
| AAACATTCAAGTTGGGAGAT+GGG | 0.491686 | 5_4:-1839852 | Msa0828910:CDS |
| AGAGTTAGAAGTCTCTAAAG+AGG | 0.492373 | 5_4:-1843612 | Msa0828910:intron |
| CGAATTCTCGATCCATTTGT+GGG | 0.495488 | 5_4:-1838863 | Msa0828910:CDS |
| CCAGTGGCAACCCTCTTGCC+AGG | 0.497542 | 5_4:-1839530 | Msa0828910:CDS |
| AACAAGGACTTGGCAGAACC+TGG | 0.499858 | 5_4:+1839512 | None:intergenic |
| GTGGTACAAGAGTATACAGC+TGG | 0.502476 | 5_4:-1838360 | Msa0828910:CDS |
| AAAACATTCAAGTTGGGAGA+TGG | 0.502988 | 5_4:-1839853 | Msa0828910:CDS |
| GACCTTTATTGAGGTTTACT+GGG | 0.503932 | 5_4:+1838456 | None:intergenic |
| TGTTTACATCTTCTCTCTAG+TGG | 0.504895 | 5_4:-1840133 | Msa0828910:CDS |
| ATCCCAGTAAACCTCAATAA+AGG | 0.507470 | 5_4:-1838458 | Msa0828910:CDS |
| GTAATAGCAATGGTTTCAGC+TGG | 0.515102 | 5_4:-1838770 | Msa0828910:CDS |
| CAAGACTGCCGCCACTGCAA+AGG | 0.518476 | 5_4:-1838713 | Msa0828910:CDS |
| CTCATTGCCTTGGGGAATGG+AGG | 0.519787 | 5_4:-1839807 | Msa0828910:CDS |
| TGCATGACATCCATTTCCCT+CGG | 0.522165 | 5_4:-1838551 | Msa0828910:CDS |
| GAGGTACGATGACAAGGATA+AGG | 0.524291 | 5_4:+1839923 | None:intergenic |
| TCGATGTCAAGGCGGCTAAG+AGG | 0.525443 | 5_4:+1838414 | None:intergenic |
| CTGGCAAGAGGGTTGCCACT+GGG | 0.527982 | 5_4:+1839531 | None:intergenic |
| CTCTACGGAGGATCACATGC+CGG | 0.528318 | 5_4:-1838486 | Msa0828910:CDS |
| ATGCCAGAGTTGCCAGACAT+TGG | 0.529945 | 5_4:+1840253 | None:intergenic |
| GGCTTGAAATGTCGGTACTT+TGG | 0.530731 | 5_4:+1839552 | None:intergenic |
| TACTCGAGCCTTTGCAGTGG+CGG | 0.530816 | 5_4:+1838705 | None:intergenic |
| GTTGCCCAAAGTTCAAAGCT+AGG | 0.531984 | 5_4:+1839688 | None:intergenic |
| TGCCACTGGGCTTGAAATGT+CGG | 0.534487 | 5_4:+1839544 | None:intergenic |
| AACATTCAAGTTGGGAGATG+GGG | 0.535122 | 5_4:-1839851 | Msa0828910:CDS |
| CTTACGGAGCTTCAGAGAAT+GGG | 0.535433 | 5_4:-1838812 | Msa0828910:CDS |
| TTCAATGCTCAAACACCAGA+TGG | 0.538636 | 5_4:-1838599 | Msa0828910:CDS |
| AAATCTGGAAGATGGTCAGC+TGG | 0.539495 | 5_4:-1843259 | Msa0828910:CDS |
| AAGGCGCCTGTTCCAACCCA+TGG | 0.544927 | 5_4:-1839111 | Msa0828910:CDS |
| CTTAGCCGCCTTGACATCGA+TGG | 0.545584 | 5_4:-1838411 | Msa0828910:CDS |
| TTGATCAGTGAACCAATGTC+TGG | 0.547412 | 5_4:-1840265 | Msa0828910:intron |
| GTTTACATCTTCTCTCTAGT+GGG | 0.548661 | 5_4:-1840132 | Msa0828910:CDS |
| TGTTATAGCTGTAATAGCAA+TGG | 0.550110 | 5_4:-1838780 | Msa0828910:CDS |
| AAGTCCTTGTTGCTGCATCA+AGG | 0.550980 | 5_4:-1839500 | Msa0828910:CDS |
| CAAGAAGAGGTACGATGACA+AGG | 0.553042 | 5_4:+1839917 | None:intergenic |
| TCAAAGCAAGACATGCTAGC+TGG | 0.554527 | 5_4:+1838923 | None:intergenic |
| AATTAGACTTTGAAGCTACC+TGG | 0.558655 | 5_4:+1838311 | None:intergenic |
| CGCAAAGAGAATGATGAGCC+AGG | 0.562335 | 5_4:-1838329 | Msa0828910:CDS |
| TAGGTAGAAGTAGCTAAAGA+AGG | 0.563359 | 5_4:+1839707 | None:intergenic |
| TAAGAGCCAAATCTGGAAGA+TGG | 0.566680 | 5_4:-1843267 | Msa0828910:CDS |
| TTCCCCAATAAGAGTCACTT+AGG | 0.572082 | 5_4:+1840103 | None:intergenic |
| AGGACAGAGACGCCATGGGT+TGG | 0.573128 | 5_4:+1839099 | None:intergenic |
| ATCCTCGAAATAGACGAGAA+TGG | 0.573136 | 5_4:+1839653 | None:intergenic |
| CTTTCCTTGATGCAGCAACA+AGG | 0.573520 | 5_4:+1839496 | None:intergenic |
| CTTTAGGTTTAATCAAGAAG+AGG | 0.576154 | 5_4:+1839904 | None:intergenic |
| AACAATGTGAGCAAATGGAC+TGG | 0.581553 | 5_4:-1840159 | Msa0828910:CDS |
| GAGCTTCAGAGAATGGGAGT+TGG | 0.583029 | 5_4:-1838806 | Msa0828910:CDS |
| TTCCTAAGTGACTCTTATTG+GGG | 0.583654 | 5_4:-1840105 | Msa0828910:CDS |
| AATTAAGTCCATCGATGTCA+AGG | 0.584514 | 5_4:+1838403 | None:intergenic |
| CGAATGTGGCAATATTCGGT+TGG | 0.585478 | 5_4:+1839781 | None:intergenic |
| CGATCTATCTCATTGCCTTG+GGG | 0.585703 | 5_4:-1839815 | Msa0828910:CDS |
| AGCTACTTACATAGTTGCCG+AGG | 0.588531 | 5_4:+1838534 | None:intergenic |
| CTCCGTAAGTCCCTTAGAGT+CGG | 0.591568 | 5_4:+1838826 | None:intergenic |
| CTTGTATAACATGGATACAA+AGG | 0.592055 | 5_4:-1839442 | Msa0828910:CDS |
| GACGAGGAGCACTCGAAGGA+GGG | 0.592862 | 5_4:-1839744 | Msa0828910:CDS |
| ATTTCGAGGATGAAGGAATG+TGG | 0.593541 | 5_4:-1839641 | Msa0828910:CDS |
| AGAGATCAAGATAACCAGAA+AGG | 0.593846 | 5_4:-1839130 | Msa0828910:CDS |
| CTCCTATAAGTGCATACTGA+GGG | 0.598714 | 5_4:+1838660 | None:intergenic |
| AGGTTTACTGGGATCCACCC+CGG | 0.598989 | 5_4:+1838467 | None:intergenic |
| TGACGAGGAGCACTCGAAGG+AGG | 0.599052 | 5_4:-1839745 | Msa0828910:CDS |
| CTTACAGGACAGAGACGCCA+TGG | 0.599282 | 5_4:+1839094 | None:intergenic |
| CTTGGCAGAACCTGGCAAGA+GGG | 0.603089 | 5_4:+1839520 | None:intergenic |
| ACCTAGTGGTATTCCTGACA+AGG | 0.604915 | 5_4:-1840212 | Msa0828910:CDS |
| TGGAGATGACTTGTATAACA+TGG | 0.607014 | 5_4:-1839451 | Msa0828910:CDS |
| ACTTGGCAGAACCTGGCAAG+AGG | 0.608237 | 5_4:+1839519 | None:intergenic |
| TGGTGCAGAGCCAAATTGGA+AGG | 0.610894 | 5_4:+1839038 | None:intergenic |
| AAACTGATCAGCCCCGAATG+TGG | 0.611538 | 5_4:+1839767 | None:intergenic |
| TGTAGTTATGAAGATCTCTA+CGG | 0.612602 | 5_4:-1838501 | Msa0828910:CDS |
| TACTCTGAAATTGTAAACAG+TGG | 0.613535 | 5_4:+1838949 | None:intergenic |
| ATTTGGCTCTTATTGCAGGA+CGG | 0.614770 | 5_4:+1843278 | None:intergenic |
| CGGGGCTGATCAGTTTGACG+AGG | 0.615131 | 5_4:-1839760 | Msa0828910:CDS |
| GTATTCCTGACAAGGGTGGT+AGG | 0.618180 | 5_4:-1840204 | Msa0828910:CDS |
| TTTCGAGGATGAAGGAATGT+GGG | 0.619267 | 5_4:-1839640 | Msa0828910:CDS |
| CGGAGGATCACATGCCGGGG+TGG | 0.619996 | 5_4:-1838481 | Msa0828910:CDS |
| GAAGGAGGGTCACAATAAAG+TGG | 0.621467 | 5_4:-1839730 | Msa0828910:CDS |
| ACTTGAACCCGTCTGTGTGG+AGG | 0.629185 | 5_4:+1839391 | None:intergenic |
| TGCACTTATAGGAGCTTCTG+AGG | 0.629617 | 5_4:-1838651 | Msa0828910:CDS |
| GCTCTGCACCATAATATACT+CGG | 0.638311 | 5_4:-1839026 | Msa0828910:CDS |
| CCCTTGTCAGGAATACCACT+AGG | 0.642342 | 5_4:+1840211 | None:intergenic |
| CCTATATTGCATGTGCAAAG+TGG | 0.646472 | 5_4:-1838379 | Msa0828910:CDS |
| GTTTGACGAGGAGCACTCGA+AGG | 0.649207 | 5_4:-1839748 | Msa0828910:CDS |
| GCTCCTATAAGTGCATACTG+AGG | 0.657896 | 5_4:+1838659 | None:intergenic |
| TTGGTAACCTCCATTCCCCA+AGG | 0.658810 | 5_4:+1839800 | None:intergenic |
| ACCGAATATTGCCACATTCG+GGG | 0.660107 | 5_4:-1839778 | Msa0828910:CDS |
| CTTACTTGAACCCGTCTGTG+TGG | 0.660599 | 5_4:+1839388 | None:intergenic |
| CGGGATTGGAGTGAACCTAG+TGG | 0.661833 | 5_4:-1840226 | Msa0828910:CDS |
| TTACAGGACAGAGACGCCAT+GGG | 0.668038 | 5_4:+1839095 | None:intergenic |
| AAGCAAGACATGCTAGCTGG+TGG | 0.671852 | 5_4:+1838926 | None:intergenic |
| AAGTACTCGAGCCTTTGCAG+TGG | 0.678677 | 5_4:+1838702 | None:intergenic |
| GCTACTTACATAGTTGCCGA+GGG | 0.679598 | 5_4:+1838535 | None:intergenic |
| CTACGGAGGATCACATGCCG+GGG | 0.680505 | 5_4:-1838484 | Msa0828910:CDS |
| CCTAGTGGTATTCCTGACAA+GGG | 0.693962 | 5_4:-1840211 | Msa0828910:CDS |
| AGTGGTATTCCTGACAAGGG+TGG | 0.695849 | 5_4:-1840208 | Msa0828910:CDS |
| TGGTACAAGAGTATACAGCT+GGG | 0.699684 | 5_4:-1838359 | Msa0828910:CDS |
| GGGAATGAATCAATTCAATG+TGG | 0.710897 | 5_4:-1839876 | Msa0828910:CDS |
| AGTTATGAAGATCTCTACGG+AGG | 0.723212 | 5_4:-1838498 | Msa0828910:CDS |
| TACCGACATTTCAAGCCCAG+TGG | 0.725447 | 5_4:-1839546 | Msa0828910:CDS |
| TAAGTCCATCGATGTCAAGG+CGG | 0.726934 | 5_4:+1838406 | None:intergenic |
| CTGCACCATAATATACTCGG+TGG | 0.739304 | 5_4:-1839023 | Msa0828910:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAATAAAATTAATA+TGG | + | chr5_4:1838756-1838775 | None:intergenic | 0.0% |
| !!! | AAATTACAACTATTTTTTTA+AGG | - | chr5_4:1839857-1839876 | Msa0828910:CDS | 10.0% |
| !!! | GAAAATTTTAATAAAAAGAA+AGG | - | chr5_4:1840023-1840042 | Msa0828910:intron | 10.0% |
| !!! | AAATTTTAATAAAAAGAAAG+GGG | - | chr5_4:1840025-1840044 | Msa0828910:intron | 10.0% |
| !! | AAAGTAATATATAAAATTCA+TGG | - | chr5_4:1841002-1841021 | Msa0828910:intron | 10.0% |
| !!! | TATGTCAAAAACAATTTTAA+GGG | + | chr5_4:1838425-1838444 | None:intergenic | 15.0% |
| !! | TAGTTGAAAAAAAACAAAAA+AGG | - | chr5_4:1839236-1839255 | Msa0828910:intron | 15.0% |
| !!! | TTATCAGTTTTATGTATAAA+AGG | - | chr5_4:1839383-1839402 | Msa0828910:intron | 15.0% |
| !! | ATAATGTTAAAGAATTATTG+TGG | - | chr5_4:1839593-1839612 | Msa0828910:CDS | 15.0% |
| !! | TAATGTTAAAGAATTATTGT+GGG | - | chr5_4:1839594-1839613 | Msa0828910:CDS | 15.0% |
| !! | TTTAGATGTATATATTTATG+AGG | - | chr5_4:1839964-1839983 | Msa0828910:intron | 15.0% |
| !!! | ATAAATTTTCTCTTATATAC+TGG | - | chr5_4:1840927-1840946 | Msa0828910:intron | 15.0% |
| !! | CAAAATTAGCTAAATAATAT+TGG | + | chr5_4:1842653-1842672 | None:intergenic | 15.0% |
| !!! | CAATATTATTTAGCTAATTT+TGG | - | chr5_4:1842651-1842670 | Msa0828910:intron | 15.0% |
| !!! | GTATGTCAAAAACAATTTTA+AGG | + | chr5_4:1838426-1838445 | None:intergenic | 20.0% |
| !!! | TTGTTTTTTTTCAACTAACA+AGG | + | chr5_4:1839233-1839252 | None:intergenic | 20.0% |
| !!! | ATTTTAGATAGCTTATCATA+AGG | - | chr5_4:1839302-1839321 | Msa0828910:intron | 20.0% |
| !!! | TTACAACTTCATTTTTTTGA+AGG | - | chr5_4:1839887-1839906 | Msa0828910:CDS | 20.0% |
| !!! | ATGATCGATTTACTTTTTTA+TGG | - | chr5_4:1839990-1840009 | Msa0828910:intron | 20.0% |
| !!! | ACTTTTTTATGGTGTAAAAA+AGG | - | chr5_4:1840001-1840020 | Msa0828910:intron | 20.0% |
| !!! | TCAATTAAAGTTGATGTATT+TGG | - | chr5_4:1840275-1840294 | Msa0828910:intron | 20.0% |
| !! | ATGAGTCAATTTATTGTATT+TGG | + | chr5_4:1840314-1840333 | None:intergenic | 20.0% |
| !!! | ACTCATTCTAGTAATTTTAT+AGG | + | chr5_4:1840343-1840362 | None:intergenic | 20.0% |
| !! | TTAAATTAACCCACTTAAAT+TGG | + | chr5_4:1840842-1840861 | None:intergenic | 20.0% |
| !!! | TTTAACTACTTTTTTCCAAA+AGG | + | chr5_4:1841044-1841063 | None:intergenic | 20.0% |
| !! | TATAAACACCATCTTATTAA+TGG | + | chr5_4:1841140-1841159 | None:intergenic | 20.0% |
| !!! | TGTTTATAGTGCTTTTATAA+AGG | - | chr5_4:1841152-1841171 | Msa0828910:intron | 20.0% |
| !! | AATATATTGTTAGGTTACTT+AGG | + | chr5_4:1841191-1841210 | None:intergenic | 20.0% |
| !! | TATTATGTTATCTATATGCA+TGG | + | chr5_4:1841335-1841354 | None:intergenic | 20.0% |
| !! | TCACTATAATATTAAGAACA+TGG | - | chr5_4:1841613-1841632 | Msa0828910:intron | 20.0% |
| ! | AGAGGAATAATGTACATATT+TGG | + | chr5_4:1838379-1838398 | None:intergenic | 25.0% |
| !!! | CATGGTTTTAAGAATTAAAG+AGG | + | chr5_4:1838397-1838416 | None:intergenic | 25.0% |
| !! | TGTTTTCGTAAGAAAAAGTA+TGG | + | chr5_4:1839013-1839032 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTCCTCAAATTCC+CGG | + | chr5_4:1839113-1839132 | None:intergenic | 25.0% |
| ! | CATAAGGAATAGTAAATGAA+AGG | - | chr5_4:1839318-1839337 | Msa0828910:intron | 25.0% |
| !! | AAAAGGAAAAACGAAAGTTT+TGG | - | chr5_4:1839400-1839419 | Msa0828910:CDS | 25.0% |
| !! | TTTGAATTTTGTATGCCAAA+TGG | + | chr5_4:1839434-1839453 | None:intergenic | 25.0% |
| !!! | TACCTAAACAATTCGTTTTT+TGG | - | chr5_4:1839749-1839768 | Msa0828910:CDS | 25.0% |
| ! | TGTATACAATTAAACTCAAG+AGG | + | chr5_4:1839788-1839807 | None:intergenic | 25.0% |
| ! | TTATTCTGAGTATGGAAAAT+TGG | - | chr5_4:1840514-1840533 | Msa0828910:intron | 25.0% |
| ! | TCACATCTATAATCTTCTTT+AGG | - | chr5_4:1840543-1840562 | Msa0828910:intron | 25.0% |
| !! | ATGAAAATCAACAATCCTTT+TGG | - | chr5_4:1841026-1841045 | Msa0828910:intron | 25.0% |
| !! | GACTGAAATAATTTTGTACA+AGG | + | chr5_4:1841422-1841441 | None:intergenic | 25.0% |
| !!! | TTTTCTGTCTTATGTTGTTT+TGG | + | chr5_4:1841484-1841503 | None:intergenic | 25.0% |
| !!! | GCTAAAAATAAAAGAGTGTT+TGG | + | chr5_4:1841926-1841945 | None:intergenic | 25.0% |
| ! | TGACTAATCAATAAATCTTC+TGG | - | chr5_4:1841962-1841981 | Msa0828910:intron | 25.0% |
| !!! | ACACACATAAGAAAGTATTA+TGG | + | chr5_4:1842599-1842618 | None:intergenic | 25.0% |
| !!! | TCAAATCATTTTAGTTCAGT+AGG | + | chr5_4:1842726-1842745 | None:intergenic | 25.0% |
| !!! | TTTTTAAGTTTTCCCACAAA+TGG | + | chr5_4:1843088-1843107 | None:intergenic | 25.0% |
| TTGCAAGACATTTGATATTC+TGG | + | chr5_4:1838893-1838912 | None:intergenic | 30.0% | |
| TCTTAAAGCTTATTGAATCC+CGG | - | chr5_4:1839091-1839110 | Msa0828910:CDS | 30.0% | |
| !!! | TTTTTTTTCCTCAAATTCCC+GGG | + | chr5_4:1839112-1839131 | None:intergenic | 30.0% |
| TACGTATAGTTTATGATAGC+TGG | - | chr5_4:1839168-1839187 | Msa0828910:intron | 30.0% | |
| CAAGTTTAAGCATGTGAATT+CGG | + | chr5_4:1839535-1839554 | None:intergenic | 30.0% | |
| TTGCTTCACACTTACTTATT+TGG | - | chr5_4:1839555-1839574 | Msa0828910:CDS | 30.0% | |
| TGCTTCACACTTACTTATTT+GGG | - | chr5_4:1839556-1839575 | Msa0828910:CDS | 30.0% | |
| ATAATGTCCTTCCCTTAAAA+GGG | + | chr5_4:1839682-1839701 | None:intergenic | 30.0% | |
| ! | ATGATCTAAAGTTTGACTGA+AGG | - | chr5_4:1839700-1839719 | Msa0828910:CDS | 30.0% |
| CACCAAAAAACGAATTGTTT+AGG | + | chr5_4:1839754-1839773 | None:intergenic | 30.0% | |
| GTGAATATTCATAGTCATAG+AGG | - | chr5_4:1840057-1840076 | Msa0828910:intron | 30.0% | |
| !!! | TTTTTAGTTACCATAGTTCC+CGG | + | chr5_4:1840114-1840133 | None:intergenic | 30.0% |
| ! | TGATAAGATTTTGCACTACT+TGG | - | chr5_4:1840200-1840219 | Msa0828910:CDS | 30.0% |
| ! | GATAAGATTTTGCACTACTT+GGG | - | chr5_4:1840201-1840220 | Msa0828910:CDS | 30.0% |
| ATGTAACCAAATGATCATGT+GGG | - | chr5_4:1840252-1840271 | Msa0828910:CDS | 30.0% | |
| GAGTAATAATTAGCCCAAAA+TGG | - | chr5_4:1840359-1840378 | Msa0828910:intron | 30.0% | |
| ! | CCAATTTACTCTTCCATTTT+GGG | + | chr5_4:1840375-1840394 | None:intergenic | 30.0% |
| ! | ACCAATTTACTCTTCCATTT+TGG | + | chr5_4:1840376-1840395 | None:intergenic | 30.0% |
| !!! | GGTATACTTTTTTTGACAAG+AGG | - | chr5_4:1840426-1840445 | Msa0828910:intron | 30.0% |
| !!! | TACTTTTTTTGACAAGAGGT+TGG | - | chr5_4:1840430-1840449 | Msa0828910:intron | 30.0% |
| TACTAACTACCTAGTTATTG+AGG | - | chr5_4:1840463-1840482 | Msa0828910:intron | 30.0% | |
| ACTAACTACCTAGTTATTGA+GGG | - | chr5_4:1840464-1840483 | Msa0828910:intron | 30.0% | |
| GTTGATTAATATGCATGCTA+TGG | - | chr5_4:1840490-1840509 | Msa0828910:intron | 30.0% | |
| TTGTTTCGTGTAAGTTAGTT+TGG | - | chr5_4:1840566-1840585 | Msa0828910:intron | 30.0% | |
| ! | TTGCATGGAAGTATATTACT+TGG | + | chr5_4:1840613-1840632 | None:intergenic | 30.0% |
| TCACGTAATATACATTTGCA+TGG | + | chr5_4:1840628-1840647 | None:intergenic | 30.0% | |
| ATACTGGTACTCAAAAAGAA+TGG | - | chr5_4:1840943-1840962 | Msa0828910:intron | 30.0% | |
| ! | CTTGAAGACACTTTTGTATA+TGG | + | chr5_4:1840970-1840989 | None:intergenic | 30.0% |
| CATCTTATTAATGGTTTCAG+AGG | + | chr5_4:1841131-1841150 | None:intergenic | 30.0% | |
| !! | CTCTGAAACCATTAATAAGA+TGG | - | chr5_4:1841129-1841148 | Msa0828910:intron | 30.0% |
| TTTCCTAAGTGACTCTTATT+GGG | - | chr5_4:1841830-1841849 | Msa0828910:intron | 30.0% | |
| !! | TGGCTTTGATATATATGACA+GGG | - | chr5_4:1841982-1842001 | Msa0828910:intron | 30.0% |
| ! | CTTTAGGTTTAATCAAGAAG+AGG | + | chr5_4:1842035-1842054 | None:intergenic | 30.0% |
| CTCTTCTTGATTAAACCTAA+AGG | - | chr5_4:1842033-1842052 | Msa0828910:intron | 30.0% | |
| TTGATTAAACCTAAAGGTTG+TGG | - | chr5_4:1842039-1842058 | Msa0828910:intron | 30.0% | |
| TGATTAAACCTAAAGGTTGT+GGG | - | chr5_4:1842040-1842059 | Msa0828910:intron | 30.0% | |
| AATGTGGAAAACATTCAAGT+TGG | - | chr5_4:1842076-1842095 | Msa0828910:intron | 30.0% | |
| ! | ATGTGGAAAACATTCAAGTT+GGG | - | chr5_4:1842077-1842096 | Msa0828910:intron | 30.0% |
| AAACAATATCAGTGCGATAA+AGG | + | chr5_4:1842352-1842371 | None:intergenic | 30.0% | |
| AAAGTTGAAATGCCATCAAA+TGG | - | chr5_4:1842465-1842484 | Msa0828910:intron | 30.0% | |
| CTTGTATAACATGGATACAA+AGG | - | chr5_4:1842494-1842513 | Msa0828910:intron | 30.0% | |
| !!! | TCCATTTTTTGTTGTGATGA+AGG | - | chr5_4:1842753-1842772 | Msa0828910:intron | 30.0% |
| ACCTTCATCACAACAAAAAA+TGG | + | chr5_4:1842757-1842776 | None:intergenic | 30.0% | |
| ! | ATTGTAAACAGTGGTTTTCA+TGG | + | chr5_4:1842981-1843000 | None:intergenic | 30.0% |
| !! | TACTCTGAAATTGTAAACAG+TGG | + | chr5_4:1842990-1843009 | None:intergenic | 30.0% |
| TGTTATAGCTGTAATAGCAA+TGG | - | chr5_4:1843156-1843175 | Msa0828910:intron | 30.0% | |
| TGTAGTTATGAAGATCTCTA+CGG | - | chr5_4:1843435-1843454 | Msa0828910:intron | 30.0% | |
| ! | AGAGTTAGAAGTCTCTAAAG+AGG | - | chr5_4:1838324-1838343 | Msa0828910:CDS | 35.0% |
| !!! | ACAATTTTAAGGGTGCTTCA+TGG | + | chr5_4:1838415-1838434 | None:intergenic | 35.0% |
| ! | TCAGAAGAATTGACTCTAGA+TGG | - | chr5_4:1838617-1838636 | Msa0828910:CDS | 35.0% |
| !! | GATGGAAGTGTTGATTTCAA+TGG | - | chr5_4:1838635-1838654 | Msa0828910:CDS | 35.0% |
| TCATTTGAACTGCACTTACT+CGG | - | chr5_4:1838919-1838938 | Msa0828910:CDS | 35.0% | |
| CTTAAAGCTTATTGAATCCC+GGG | - | chr5_4:1839092-1839111 | Msa0828910:CDS | 35.0% | |
| AGTTTATGATAGCTGGAGAA+AGG | - | chr5_4:1839175-1839194 | Msa0828910:intron | 35.0% | |
| !!! | GTTTTGGAACGTTTTCCATT+TGG | - | chr5_4:1839416-1839435 | Msa0828910:CDS | 35.0% |
| GCTTCACACTTACTTATTTG+GGG | - | chr5_4:1839557-1839576 | Msa0828910:CDS | 35.0% | |
| ! | ATGTTAACCATCCCCTTTTA+AGG | - | chr5_4:1839667-1839686 | Msa0828910:CDS | 35.0% |
| ! | TGTTAACCATCCCCTTTTAA+GGG | - | chr5_4:1839668-1839687 | Msa0828910:CDS | 35.0% |
| TAATGTCCTTCCCTTAAAAG+GGG | + | chr5_4:1839681-1839700 | None:intergenic | 35.0% | |
| CATAATGTCCTTCCCTTAAA+AGG | + | chr5_4:1839683-1839702 | None:intergenic | 35.0% | |
| CAAAATGCAGAAAAGAAGCA+TGG | - | chr5_4:1840139-1840158 | Msa0828910:CDS | 35.0% | |
| GTAGTGCAAAATCTTATCAC+TGG | + | chr5_4:1840199-1840218 | None:intergenic | 35.0% | |
| CATGTAACCAAATGATCATG+TGG | - | chr5_4:1840251-1840270 | Msa0828910:CDS | 35.0% | |
| AATTGACCCACATGATCATT+TGG | + | chr5_4:1840261-1840280 | None:intergenic | 35.0% | |
| CCCAAAATGGAAGAGTAAAT+TGG | - | chr5_4:1840372-1840391 | Msa0828910:intron | 35.0% | |
| !! | ATTGGTATTGACCCTACAAA+AGG | - | chr5_4:1840390-1840409 | Msa0828910:intron | 35.0% |
| TCAACTAACCCTCAATAACT+AGG | + | chr5_4:1840475-1840494 | None:intergenic | 35.0% | |
| GCTATGGTTTATTCTGAGTA+TGG | - | chr5_4:1840506-1840525 | Msa0828910:intron | 35.0% | |
| TAACCCACTTAAATTGGCAT+CGG | + | chr5_4:1840836-1840855 | None:intergenic | 35.0% | |
| ! | ACTTCAAAAAGCAGGTTTTG+TGG | + | chr5_4:1841099-1841118 | None:intergenic | 35.0% |
| GTGATAACACTTCAAAAAGC+AGG | + | chr5_4:1841107-1841126 | None:intergenic | 35.0% | |
| TAGGTTACTTAGGTATGCTT+AGG | + | chr5_4:1841181-1841200 | None:intergenic | 35.0% | |
| ATCTTGTGTGTGCATATGTA+TGG | - | chr5_4:1841232-1841251 | Msa0828910:intron | 35.0% | |
| ATAGACAACCCTTTACAGAA+TGG | - | chr5_4:1841265-1841284 | Msa0828910:intron | 35.0% | |
| CATCACAACCATTCTGTAAA+GGG | + | chr5_4:1841276-1841295 | None:intergenic | 35.0% | |
| CTTTCCTAAGTGACTCTTAT+TGG | - | chr5_4:1841829-1841848 | Msa0828910:intron | 35.0% | |
| TTCCTAAGTGACTCTTATTG+GGG | - | chr5_4:1841831-1841850 | Msa0828910:intron | 35.0% | |
| TAAAACATGTGCTGTCTTTC+AGG | - | chr5_4:1841860-1841879 | Msa0828910:intron | 35.0% | |
| !! | CTGGCTTTGATATATATGAC+AGG | - | chr5_4:1841981-1842000 | Msa0828910:intron | 35.0% |
| GGGAATGAATCAATTCAATG+TGG | - | chr5_4:1842060-1842079 | Msa0828910:intron | 35.0% | |
| !! | AAAACATTCAAGTTGGGAGA+TGG | - | chr5_4:1842083-1842102 | Msa0828910:intron | 35.0% |
| !! | AAACATTCAAGTTGGGAGAT+GGG | - | chr5_4:1842084-1842103 | Msa0828910:intron | 35.0% |
| TAGGTAGAAGTAGCTAAAGA+AGG | + | chr5_4:1842232-1842251 | None:intergenic | 35.0% | |
| !! | TTCTACCTAGCTTTGAACTT+TGG | - | chr5_4:1842243-1842262 | Msa0828910:intron | 35.0% |
| !! | TCTACCTAGCTTTGAACTTT+GGG | - | chr5_4:1842244-1842263 | Msa0828910:intron | 35.0% |
| ! | GCACTGATATTGTTTCTTGT+TGG | - | chr5_4:1842357-1842376 | Msa0828910:intron | 35.0% |
| TACAAGTCATCTCCATTTGA+TGG | + | chr5_4:1842480-1842499 | None:intergenic | 35.0% | |
| ! | TGGAGATGACTTGTATAACA+TGG | - | chr5_4:1842485-1842504 | Msa0828910:intron | 35.0% |
| AGTATTATGGTTTCAGCTGA+AGG | + | chr5_4:1842586-1842605 | None:intergenic | 35.0% | |
| ! | AGTTCAGTAGGATCTAGAAT+GGG | + | chr5_4:1842714-1842733 | None:intergenic | 35.0% |
| TAGTTCAGTAGGATCTAGAA+TGG | + | chr5_4:1842715-1842734 | None:intergenic | 35.0% | |
| ! | TTTGTTGTGATGAAGGTTCT+TGG | - | chr5_4:1842760-1842779 | Msa0828910:intron | 35.0% |
| AGAGATCAAGATAACCAGAA+AGG | - | chr5_4:1842806-1842825 | Msa0828910:intron | 35.0% | |
| ACTTCTTCAACTTGACTTAC+AGG | + | chr5_4:1842860-1842879 | None:intergenic | 35.0% | |
| GAAAACCACCGAGTATATTA+TGG | + | chr5_4:1842921-1842940 | None:intergenic | 35.0% | |
| ! | ACAAATGGCTTCTCTTTTTG+TGG | - | chr5_4:1842943-1842962 | Msa0828910:intron | 35.0% |
| ACTTAAAAAGTCCGACTCTA+AGG | - | chr5_4:1843099-1843118 | Msa0828910:intron | 35.0% | |
| CTTAAAAAGTCCGACTCTAA+GGG | - | chr5_4:1843100-1843119 | Msa0828910:intron | 35.0% | |
| !! | CTGGACTAGTTGAATGTTAT+AGG | - | chr5_4:1843185-1843204 | Msa0828910:intron | 35.0% |
| ! | TCTGAGGTGTTTATGTATGT+AGG | - | chr5_4:1843301-1843320 | Msa0828910:CDS | 35.0% |
| ! | CTGAGGTGTTTATGTATGTA+GGG | - | chr5_4:1843302-1843321 | Msa0828910:CDS | 35.0% |
| CAACTATGTAAGTAGCTTAC+TGG | - | chr5_4:1843408-1843427 | Msa0828910:intron | 35.0% | |
| ATCCCAGTAAACCTCAATAA+AGG | - | chr5_4:1843478-1843497 | Msa0828910:intron | 35.0% | |
| GACCTTTATTGAGGTTTACT+GGG | + | chr5_4:1843483-1843502 | None:intergenic | 35.0% | |
| TGACCTTTATTGAGGTTTAC+TGG | + | chr5_4:1843484-1843503 | None:intergenic | 35.0% | |
| TATCTAGGTGACCTTTATTG+AGG | + | chr5_4:1843492-1843511 | None:intergenic | 35.0% | |
| TCAATAAAGGTCACCTAGAT+AGG | - | chr5_4:1843491-1843510 | Msa0828910:intron | 35.0% | |
| AGAGGAAGTAAAACCTATCT+AGG | + | chr5_4:1843507-1843526 | None:intergenic | 35.0% | |
| AATTAAGTCCATCGATGTCA+AGG | + | chr5_4:1843536-1843555 | None:intergenic | 35.0% | |
| !! | ATTTGGCTCTTATTGCAGGA+CGG | + | chr5_4:1838661-1838680 | None:intergenic | 40.0% |
| TAAGAGCCAAATCTGGAAGA+TGG | - | chr5_4:1838669-1838688 | Msa0828910:CDS | 40.0% | |
| !!! | TGTGTGTGAGTTTTGTTACG+AGG | + | chr5_4:1838808-1838827 | None:intergenic | 40.0% |
| TATTGAATCCCGGGAATTTG+AGG | - | chr5_4:1839101-1839120 | Msa0828910:CDS | 40.0% | |
| !! | AGCTTTGTTGCATGCAAACT+TGG | - | chr5_4:1839468-1839487 | Msa0828910:CDS | 40.0% |
| TTGTTGCATGCAAACTTGGA+AGG | - | chr5_4:1839472-1839491 | Msa0828910:CDS | 40.0% | |
| GTGGATAAAGTAGAGTTAGC+TGG | + | chr5_4:1839513-1839532 | None:intergenic | 40.0% | |
| GTTTAAGCATGTGAATTCGG+TGG | + | chr5_4:1839532-1839551 | None:intergenic | 40.0% | |
| CTCAACAAAAGACAAGAGAC+CGG | - | chr5_4:1840092-1840111 | Msa0828910:CDS | 40.0% | |
| TCAACAAAAGACAAGAGACC+GGG | - | chr5_4:1840093-1840112 | Msa0828910:CDS | 40.0% | |
| ! | AAGATTTTGCACTACTTGGG+TGG | - | chr5_4:1840204-1840223 | Msa0828910:CDS | 40.0% |
| ! | GCTATCGTGATCCTTTTGTA+GGG | + | chr5_4:1840404-1840423 | None:intergenic | 40.0% |
| ! | AGCTATCGTGATCCTTTTGT+AGG | + | chr5_4:1840405-1840424 | None:intergenic | 40.0% |
| ACAAAAGGATCACGATAGCT+AGG | - | chr5_4:1840405-1840424 | Msa0828910:intron | 40.0% | |
| ATGATATAACCCACTTGCGT+TGG | - | chr5_4:1840747-1840766 | Msa0828910:intron | 40.0% | |
| ATTGATCCTAAGACCTCAAG+AGG | + | chr5_4:1840808-1840827 | None:intergenic | 40.0% | |
| AACCCACTTAAATTGGCATC+GGG | + | chr5_4:1840835-1840854 | None:intergenic | 40.0% | |
| TTGTGTGTGCATATGTATGG+TGG | - | chr5_4:1841235-1841254 | Msa0828910:intron | 40.0% | |
| CCATCACAACCATTCTGTAA+AGG | + | chr5_4:1841277-1841296 | None:intergenic | 40.0% | |
| CCTTTACAGAATGGTTGTGA+TGG | - | chr5_4:1841274-1841293 | Msa0828910:intron | 40.0% | |
| AATGGTTGTGATGGCTGATT+AGG | - | chr5_4:1841283-1841302 | Msa0828910:intron | 40.0% | |
| ! | GAAGGTGTAGATAAGCATGA+TGG | - | chr5_4:1841580-1841599 | Msa0828910:intron | 40.0% |
| TTGATCAGTGAACCAATGTC+TGG | - | chr5_4:1841671-1841690 | Msa0828910:intron | 40.0% | |
| CCATTTGCTCACATTGTTAG+CGG | + | chr5_4:1841775-1841794 | None:intergenic | 40.0% | |
| AACAATGTGAGCAAATGGAC+TGG | - | chr5_4:1841777-1841796 | Msa0828910:intron | 40.0% | |
| TTCCCCAATAAGAGTCACTT+AGG | + | chr5_4:1841836-1841855 | None:intergenic | 40.0% | |
| GATTCATTCCCACAACCTTT+AGG | + | chr5_4:1842051-1842070 | None:intergenic | 40.0% | |
| !! | AACATTCAAGTTGGGAGATG+GGG | - | chr5_4:1842085-1842104 | Msa0828910:intron | 40.0% |
| TCGATCTATCTCATTGCCTT+GGG | - | chr5_4:1842120-1842139 | Msa0828910:intron | 40.0% | |
| CAACCGAATATTGCCACATT+CGG | - | chr5_4:1842156-1842175 | Msa0828910:intron | 40.0% | |
| AACCGAATATTGCCACATTC+GGG | - | chr5_4:1842157-1842176 | Msa0828910:intron | 40.0% | |
| ATCCTCGAAATAGACGAGAA+TGG | + | chr5_4:1842286-1842305 | None:intergenic | 40.0% | |
| ATTTCGAGGATGAAGGAATG+TGG | - | chr5_4:1842295-1842314 | Msa0828910:intron | 40.0% | |
| TTTCGAGGATGAAGGAATGT+GGG | - | chr5_4:1842296-1842315 | Msa0828910:intron | 40.0% | |
| ! | GAGGATTTTTCTGTTCGCAT+CGG | + | chr5_4:1842529-1842548 | None:intergenic | 40.0% |
| AGAAAAATCCTCCACACAGA+CGG | - | chr5_4:1842537-1842556 | Msa0828910:intron | 40.0% | |
| TACTGAGACTCCTTCCAATT+TGG | - | chr5_4:1842888-1842907 | Msa0828910:intron | 40.0% | |
| ATTATGGTGCAGAGCCAAAT+TGG | + | chr5_4:1842905-1842924 | None:intergenic | 40.0% | |
| GCTCTGCACCATAATATACT+CGG | - | chr5_4:1842910-1842929 | Msa0828910:intron | 40.0% | |
| TCGAATTCTCGATCCATTTG+TGG | - | chr5_4:1843072-1843091 | Msa0828910:intron | 40.0% | |
| CGAATTCTCGATCCATTTGT+GGG | - | chr5_4:1843073-1843092 | Msa0828910:intron | 40.0% | |
| GTAATAGCAATGGTTTCAGC+TGG | - | chr5_4:1843166-1843185 | Msa0828910:intron | 40.0% | |
| ATCCCTCAGTATGCACTTAT+AGG | - | chr5_4:1843274-1843293 | Msa0828910:CDS | 40.0% | |
| CTCCTATAAGTGCATACTGA+GGG | + | chr5_4:1843279-1843298 | None:intergenic | 40.0% | |
| TTCAATGCTCAAACACCAGA+TGG | - | chr5_4:1843337-1843356 | Msa0828910:CDS | 40.0% | |
| CCAGATGGCTTAAAGAGTTT+CGG | - | chr5_4:1843352-1843371 | Msa0828910:CDS | 40.0% | |
| AGTTATGAAGATCTCTACGG+AGG | - | chr5_4:1843438-1843457 | Msa0828910:intron | 40.0% | |
| CCACTTTGCACATGCAATAT+AGG | + | chr5_4:1843560-1843579 | None:intergenic | 40.0% | |
| CCTATATTGCATGTGCAAAG+TGG | - | chr5_4:1843557-1843576 | Msa0828910:intron | 40.0% | |
| ! | TGGTACAAGAGTATACAGCT+GGG | - | chr5_4:1843577-1843596 | Msa0828910:intron | 40.0% |
| !! | CCAGATTTGGCTCTTATTGC+AGG | + | chr5_4:1838665-1838684 | None:intergenic | 45.0% |
| CCTGCAATAAGAGCCAAATC+TGG | - | chr5_4:1838662-1838681 | Msa0828910:CDS | 45.0% | |
| AGCTGACCATCTTCCAGATT+TGG | + | chr5_4:1838678-1838697 | None:intergenic | 45.0% | |
| AAATCTGGAAGATGGTCAGC+TGG | - | chr5_4:1838677-1838696 | Msa0828910:CDS | 45.0% | |
| ! | TGATAGCTGGAGAAAGGTGT+TGG | - | chr5_4:1839181-1839200 | Msa0828910:intron | 45.0% |
| !! | GAGAAAGGTGTTGGTGTTGA+TGG | - | chr5_4:1839190-1839209 | Msa0828910:intron | 45.0% |
| AAAGTAGAGTTAGCTGGCAC+TGG | + | chr5_4:1839507-1839526 | None:intergenic | 45.0% | |
| !! | AACCATCCCCTTTTAAGGGA+AGG | - | chr5_4:1839672-1839691 | Msa0828910:CDS | 45.0% |
| ! | CGGTCTCTTGTCTTTTGTTG+AGG | + | chr5_4:1840094-1840113 | None:intergenic | 45.0% |
| TCCCCGATGCCAATTTAAGT+GGG | - | chr5_4:1840830-1840849 | Msa0828910:intron | 45.0% | |
| ACCCACTTAAATTGGCATCG+GGG | + | chr5_4:1840834-1840853 | None:intergenic | 45.0% | |
| GTATACATCTGCTCTGCACT+TGG | - | chr5_4:1841547-1841566 | Msa0828910:intron | 45.0% | |
| GCACTTGGCATAAAGCATGA+AGG | - | chr5_4:1841562-1841581 | Msa0828910:intron | 45.0% | |
| ! | CTGGCAACTCTGGCATTTTT+CGG | - | chr5_4:1841690-1841709 | Msa0828910:intron | 45.0% |
| ! | TGGCAACTCTGGCATTTTTC+GGG | - | chr5_4:1841691-1841710 | Msa0828910:intron | 45.0% |
| !!! | ACTCTGGCATTTTTCGGGAT+TGG | - | chr5_4:1841696-1841715 | Msa0828910:intron | 45.0% |
| ACCTAGTGGTATTCCTGACA+AGG | - | chr5_4:1841724-1841743 | Msa0828910:intron | 45.0% | |
| CCTAGTGGTATTCCTGACAA+GGG | - | chr5_4:1841725-1841744 | Msa0828910:intron | 45.0% | |
| CCGCTAACAATGTGAGCAAA+TGG | - | chr5_4:1841772-1841791 | Msa0828910:intron | 45.0% | |
| GAGGTACGATGACAAGGATA+AGG | + | chr5_4:1842016-1842035 | None:intergenic | 45.0% | |
| ! | CAAGAAGAGGTACGATGACA+AGG | + | chr5_4:1842022-1842041 | None:intergenic | 45.0% |
| CTCGATCTATCTCATTGCCT+TGG | - | chr5_4:1842119-1842138 | Msa0828910:intron | 45.0% | |
| CGATCTATCTCATTGCCTTG+GGG | - | chr5_4:1842121-1842140 | Msa0828910:intron | 45.0% | |
| TATCTCATTGCCTTGGGGAA+TGG | - | chr5_4:1842126-1842145 | Msa0828910:intron | 45.0% | |
| CGAATGTGGCAATATTCGGT+TGG | + | chr5_4:1842158-1842177 | None:intergenic | 45.0% | |
| ACCGAATATTGCCACATTCG+GGG | - | chr5_4:1842158-1842177 | Msa0828910:intron | 45.0% | |
| GAAGGAGGGTCACAATAAAG+TGG | - | chr5_4:1842206-1842225 | Msa0828910:intron | 45.0% | |
| GTTGCCCAAAGTTCAAAGCT+AGG | + | chr5_4:1842251-1842270 | None:intergenic | 45.0% | |
| CACCATTCTCGTCTATTTCG+AGG | - | chr5_4:1842281-1842300 | Msa0828910:intron | 45.0% | |
| CTCGTCTATTTCGAGGATGA+AGG | - | chr5_4:1842288-1842307 | Msa0828910:intron | 45.0% | |
| GGCTTGAAATGTCGGTACTT+TGG | + | chr5_4:1842387-1842406 | None:intergenic | 45.0% | |
| TTGATGCAGCAACAAGGACT+TGG | + | chr5_4:1842437-1842456 | None:intergenic | 45.0% | |
| AAGTCCTTGTTGCTGCATCA+AGG | - | chr5_4:1842436-1842455 | Msa0828910:intron | 45.0% | |
| CTTTCCTTGATGCAGCAACA+AGG | + | chr5_4:1842443-1842462 | None:intergenic | 45.0% | |
| ! | GATTTTTCTGTTCGCATCGG+TGG | + | chr5_4:1842526-1842545 | None:intergenic | 45.0% |
| GAAAAATCCTCCACACAGAC+GGG | - | chr5_4:1842538-1842557 | Msa0828910:intron | 45.0% | |
| CTGTTTCATGCTTGCAGTCT+CGG | + | chr5_4:1842626-1842645 | None:intergenic | 45.0% | |
| CTGCACCATAATATACTCGG+TGG | - | chr5_4:1842913-1842932 | Msa0828910:intron | 45.0% | |
| ! | CTCGGTGGTTTTCACACAAA+TGG | - | chr5_4:1842928-1842947 | Msa0828910:intron | 45.0% |
| ! | GCTTCTCTTTTTGTGGAGCA+AGG | - | chr5_4:1842950-1842969 | Msa0828910:intron | 45.0% |
| TCAAAGCAAGACATGCTAGC+TGG | + | chr5_4:1843016-1843035 | None:intergenic | 45.0% | |
| ACTTACGGAGCTTCAGAGAA+TGG | - | chr5_4:1843123-1843142 | Msa0828910:intron | 45.0% | |
| CTTACGGAGCTTCAGAGAAT+GGG | - | chr5_4:1843124-1843143 | Msa0828910:intron | 45.0% | |
| CGAGTACTTTGAGCATCTTC+TGG | - | chr5_4:1843248-1843267 | Msa0828910:CDS | 45.0% | |
| GCTCCTATAAGTGCATACTG+AGG | + | chr5_4:1843280-1843299 | None:intergenic | 45.0% | |
| TGCACTTATAGGAGCTTCTG+AGG | - | chr5_4:1843285-1843304 | Msa0828910:CDS | 45.0% | |
| CCGAAACTCTTTAAGCCATC+TGG | + | chr5_4:1843355-1843374 | None:intergenic | 45.0% | |
| TGCATGACATCCATTTCCCT+CGG | - | chr5_4:1843385-1843404 | Msa0828910:intron | 45.0% | |
| TACATAGTTGCCGAGGGAAA+TGG | + | chr5_4:1843398-1843417 | None:intergenic | 45.0% | |
| GCTACTTACATAGTTGCCGA+GGG | + | chr5_4:1843404-1843423 | None:intergenic | 45.0% | |
| AGCTACTTACATAGTTGCCG+AGG | + | chr5_4:1843405-1843424 | None:intergenic | 45.0% | |
| TAAGTCCATCGATGTCAAGG+CGG | + | chr5_4:1843533-1843552 | None:intergenic | 45.0% | |
| ! | GTGGTACAAGAGTATACAGC+TGG | - | chr5_4:1843576-1843595 | Msa0828910:intron | 45.0% |
| !!! | TTTTATTTTATTATATACTT+TGG | - | chr5_4:1838762-1838781 | Msa0828910:CDS | 5.0% |
| !!! | AAAATTTTAATAAAAAGAAA+GGG | - | chr5_4:1840024-1840043 | Msa0828910:intron | 5.0% |
| !!! | TTATTTTATAATATATTGTT+AGG | + | chr5_4:1841200-1841219 | None:intergenic | 5.0% |
| !! | TGTTGGTGTTGATGGCGTAG+AGG | - | chr5_4:1839198-1839217 | Msa0828910:intron | 50.0% |
| GTCCTTCCCTTAAAAGGGGA+TGG | + | chr5_4:1839677-1839696 | None:intergenic | 50.0% | |
| AGACAAGAGACCGGGAACTA+TGG | - | chr5_4:1840101-1840120 | Msa0828910:CDS | 50.0% | |
| !! | TTGGCCTGGTGGTATTGGTT+TGG | - | chr5_4:1840766-1840785 | Msa0828910:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGGTTT+GGG | - | chr5_4:1840767-1840786 | Msa0828910:intron | 50.0% |
| !! | GTGGTATTGGTTTGGGACCT+GGG | - | chr5_4:1840774-1840793 | Msa0828910:intron | 50.0% |
| TGTGCTCCTCTTGAGGTCTT+AGG | - | chr5_4:1840799-1840818 | Msa0828910:intron | 50.0% | |
| CTCCCCGATGCCAATTTAAG+TGG | - | chr5_4:1840829-1840848 | Msa0828910:intron | 50.0% | |
| GAACCAATGTCTGGCAACTC+TGG | - | chr5_4:1841680-1841699 | Msa0828910:intron | 50.0% | |
| ATGCCAGAGTTGCCAGACAT+TGG | + | chr5_4:1841686-1841705 | None:intergenic | 50.0% | |
| CCCTTGTCAGGAATACCACT+AGG | + | chr5_4:1841728-1841747 | None:intergenic | 50.0% | |
| AGTGGTATTCCTGACAAGGG+TGG | - | chr5_4:1841728-1841747 | Msa0828910:intron | 50.0% | |
| GTATTCCTGACAAGGGTGGT+AGG | - | chr5_4:1841732-1841751 | Msa0828910:intron | 50.0% | |
| TTTGTCCTACCACCCTTGTC+AGG | + | chr5_4:1841740-1841759 | None:intergenic | 50.0% | |
| ! | TTGGTAACCTCCATTCCCCA+AGG | + | chr5_4:1842139-1842158 | None:intergenic | 50.0% |
| GCCCCGAATGTGGCAATATT+CGG | + | chr5_4:1842162-1842181 | None:intergenic | 50.0% | |
| AAACTGATCAGCCCCGAATG+TGG | + | chr5_4:1842172-1842191 | None:intergenic | 50.0% | |
| GATGAAGGAATGTGGGCTCT+TGG | - | chr5_4:1842303-1842322 | Msa0828910:intron | 50.0% | |
| TACCGACATTTCAAGCCCAG+TGG | - | chr5_4:1842390-1842409 | Msa0828910:intron | 50.0% | |
| TGCCACTGGGCTTGAAATGT+CGG | + | chr5_4:1842395-1842414 | None:intergenic | 50.0% | |
| AACAAGGACTTGGCAGAACC+TGG | + | chr5_4:1842427-1842446 | None:intergenic | 50.0% | |
| CTTACTTGAACCCGTCTGTG+TGG | + | chr5_4:1842551-1842570 | None:intergenic | 50.0% | |
| TTACAGGACAGAGACGCCAT+GGG | + | chr5_4:1842844-1842863 | None:intergenic | 50.0% | |
| TGGTGCAGAGCCAAATTGGA+AGG | + | chr5_4:1842901-1842920 | None:intergenic | 50.0% | |
| AAGCAAGACATGCTAGCTGG+TGG | + | chr5_4:1843013-1843032 | None:intergenic | 50.0% | |
| ! | GTCCGACTCTAAGGGACTTA+CGG | - | chr5_4:1843108-1843127 | Msa0828910:intron | 50.0% |
| CTCCGTAAGTCCCTTAGAGT+CGG | + | chr5_4:1843113-1843132 | None:intergenic | 50.0% | |
| GAGCTTCAGAGAATGGGAGT+TGG | - | chr5_4:1843130-1843149 | Msa0828910:intron | 50.0% | |
| AAGTACTCGAGCCTTTGCAG+TGG | + | chr5_4:1843237-1843256 | None:intergenic | 50.0% | |
| CGCAAAGAGAATGATGAGCC+AGG | - | chr5_4:1843607-1843626 | Msa0828910:intron | 50.0% | |
| ! | ATAACCCACTTGCGTTGGCC+TGG | - | chr5_4:1840752-1840771 | Msa0828910:intron | 55.0% |
| ! | TTGCGTTGGCCTGGTGGTAT+TGG | - | chr5_4:1840761-1840780 | Msa0828910:intron | 55.0% |
| GGTCCCAAACCAATACCACC+AGG | + | chr5_4:1840773-1840792 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGGTTTGGGACC+TGG | - | chr5_4:1840773-1840792 | Msa0828910:intron | 55.0% |
| CGGGATTGGAGTGAACCTAG+TGG | - | chr5_4:1841710-1841729 | Msa0828910:intron | 55.0% | |
| CTCATTGCCTTGGGGAATGG+AGG | - | chr5_4:1842129-1842148 | Msa0828910:intron | 55.0% | |
| !! | GTTTGACGAGGAGCACTCGA+AGG | - | chr5_4:1842188-1842207 | Msa0828910:intron | 55.0% |
| GAATGTGGGCTCTTGGCTTC+TGG | - | chr5_4:1842310-1842329 | Msa0828910:intron | 55.0% | |
| CTTGGCAGAACCTGGCAAGA+GGG | + | chr5_4:1842419-1842438 | None:intergenic | 55.0% | |
| ACTTGGCAGAACCTGGCAAG+AGG | + | chr5_4:1842420-1842439 | None:intergenic | 55.0% | |
| ACTTGAACCCGTCTGTGTGG+AGG | + | chr5_4:1842548-1842567 | None:intergenic | 55.0% | |
| CTTACAGGACAGAGACGCCA+TGG | + | chr5_4:1842845-1842864 | None:intergenic | 55.0% | |
| TACTCGAGCCTTTGCAGTGG+CGG | + | chr5_4:1843234-1843253 | None:intergenic | 55.0% | |
| CTCTACGGAGGATCACATGC+CGG | - | chr5_4:1843450-1843469 | Msa0828910:intron | 55.0% | |
| TCTACGGAGGATCACATGCC+GGG | - | chr5_4:1843451-1843470 | Msa0828910:intron | 55.0% | |
| AGGTTTACTGGGATCCACCC+CGG | + | chr5_4:1843472-1843491 | None:intergenic | 55.0% | |
| TCGATGTCAAGGCGGCTAAG+AGG | + | chr5_4:1843525-1843544 | None:intergenic | 55.0% | |
| CTTAGCCGCCTTGACATCGA+TGG | - | chr5_4:1843525-1843544 | Msa0828910:intron | 55.0% | |
| ACCACCAGGCCAACGCAAGT+GGG | + | chr5_4:1840759-1840778 | None:intergenic | 60.0% | |
| TACCACCAGGCCAACGCAAG+TGG | + | chr5_4:1840760-1840779 | None:intergenic | 60.0% | |
| ! | CTCAAGAGGAGCACACTCCC+AGG | + | chr5_4:1840794-1840813 | None:intergenic | 60.0% |
| ! | CTGGGAGTGTGCTCCTCTTG+AGG | - | chr5_4:1840792-1840811 | Msa0828910:intron | 60.0% |
| CGGGGCTGATCAGTTTGACG+AGG | - | chr5_4:1842176-1842195 | Msa0828910:intron | 60.0% | |
| !! | TGACGAGGAGCACTCGAAGG+AGG | - | chr5_4:1842191-1842210 | Msa0828910:intron | 60.0% |
| !! | GACGAGGAGCACTCGAAGGA+GGG | - | chr5_4:1842192-1842211 | Msa0828910:intron | 60.0% |
| ! | CTTGGCTTCTGGCTGTCTGC+AGG | - | chr5_4:1842321-1842340 | Msa0828910:intron | 60.0% |
| CTGGCAAGAGGGTTGCCACT+GGG | + | chr5_4:1842408-1842427 | None:intergenic | 60.0% | |
| GGTTGGAACAGGCGCCTTTC+TGG | + | chr5_4:1842823-1842842 | None:intergenic | 60.0% | |
| ! | AAGGCGCCTGTTCCAACCCA+TGG | - | chr5_4:1842825-1842844 | Msa0828910:intron | 60.0% |
| !! | GAGACGCCATGGGTTGGAAC+AGG | + | chr5_4:1842834-1842853 | None:intergenic | 60.0% |
| AGGACAGAGACGCCATGGGT+TGG | + | chr5_4:1842840-1842859 | None:intergenic | 60.0% | |
| CTTTGCAGTGGCGGCAGTCT+TGG | + | chr5_4:1843225-1843244 | None:intergenic | 60.0% | |
| CAAGACTGCCGCCACTGCAA+AGG | - | chr5_4:1843223-1843242 | Msa0828910:intron | 60.0% | |
| CTACGGAGGATCACATGCCG+GGG | - | chr5_4:1843452-1843471 | Msa0828910:intron | 60.0% | |
| ! | ACCCACTTGCGTTGGCCTGG+TGG | - | chr5_4:1840755-1840774 | Msa0828910:intron | 65.0% |
| CCTGGCAAGAGGGTTGCCAC+TGG | + | chr5_4:1842409-1842428 | None:intergenic | 65.0% | |
| CCAGTGGCAACCCTCTTGCC+AGG | - | chr5_4:1842406-1842425 | Msa0828910:intron | 65.0% | |
| CGGAGGATCACATGCCGGGG+TGG | - | chr5_4:1843455-1843474 | Msa0828910:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 1838313 | 1843645 | 1838313 | ID=Msa0828910;Name=Msa0828910 |
| chr5_4 | mRNA | 1838313 | 1843645 | 1838313 | ID=Msa0828910-mRNA-1;Parent=Msa0828910;Name=Msa0828910-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.25|0|1|0.75|0.8|5|0|605 |
| chr5_4 | exon | 1843613 | 1843645 | 1843613 | ID=Msa0828910-mRNA-1:exon:475;Parent=Msa0828910-mRNA-1 |
| chr5_4 | exon | 1843245 | 1843377 | 1843245 | ID=Msa0828910-mRNA-1:exon:474;Parent=Msa0828910-mRNA-1 |
| chr5_4 | exon | 1840062 | 1840279 | 1840062 | ID=Msa0828910-mRNA-1:exon:473;Parent=Msa0828910-mRNA-1 |
| chr5_4 | exon | 1839393 | 1839955 | 1839393 | ID=Msa0828910-mRNA-1:exon:472;Parent=Msa0828910-mRNA-1 |
| chr5_4 | exon | 1838313 | 1839183 | 1838313 | ID=Msa0828910-mRNA-1:exon:471;Parent=Msa0828910-mRNA-1 |
| chr5_4 | CDS | 1843613 | 1843645 | 1843613 | ID=Msa0828910-mRNA-1:cds;Parent=Msa0828910-mRNA-1 |
| chr5_4 | CDS | 1843245 | 1843377 | 1843245 | ID=Msa0828910-mRNA-1:cds;Parent=Msa0828910-mRNA-1 |
| chr5_4 | CDS | 1840062 | 1840279 | 1840062 | ID=Msa0828910-mRNA-1:cds;Parent=Msa0828910-mRNA-1 |
| chr5_4 | CDS | 1839393 | 1839955 | 1839393 | ID=Msa0828910-mRNA-1:cds;Parent=Msa0828910-mRNA-1 |
| chr5_4 | CDS | 1838313 | 1839183 | 1838313 | ID=Msa0828910-mRNA-1:cds;Parent=Msa0828910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
