Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183730 | sp|Q9LZ23|ACR12_ARATH | 77.593 | 241 | 47 | 2 | 44 | 280 | 64 | 301 | 2.18e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183730 | A0A072VSB7 | 96.429 | 280 | 10 | 0 | 1 | 280 | 1 | 280 | 0.0 | 546 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004180 | Msa0183730 | -0.806245 | 9.035206e-50 | -8.615850e-47 |
| Msa0030760 | Msa0183730 | -0.824190 | 9.231911e-54 | -8.615850e-47 |
| Msa0044120 | Msa0183730 | 0.952450 | 2.357900e-110 | -8.615850e-47 |
| Msa0047560 | Msa0183730 | -0.800521 | 1.386220e-48 | -8.615850e-47 |
| Msa0053260 | Msa0183730 | -0.801392 | 9.199470e-49 | -8.615850e-47 |
| Msa0061130 | Msa0183730 | -0.808530 | 2.960463e-50 | -8.615850e-47 |
| Msa0064240 | Msa0183730 | -0.802088 | 6.623202e-49 | -8.615850e-47 |
| Msa0070580 | Msa0183730 | -0.808736 | 2.674959e-50 | -8.615850e-47 |
| Msa0078160 | Msa0183730 | -0.836346 | 9.874100e-57 | -8.615850e-47 |
| Msa0078170 | Msa0183730 | -0.817621 | 2.998746e-52 | -8.615850e-47 |
| Msa0097220 | Msa0183730 | -0.807222 | 5.616344e-50 | -8.615850e-47 |
| Msa0118700 | Msa0183730 | -0.804796 | 1.819242e-49 | -8.615850e-47 |
| Msa0132080 | Msa0183730 | -0.804020 | 2.639823e-49 | -8.615850e-47 |
| Msa0143950 | Msa0183730 | 0.810952 | 8.923053e-51 | -8.615850e-47 |
| Msa0144000 | Msa0183730 | 0.806699 | 7.246084e-50 | -8.615850e-47 |
| Msa0145990 | Msa0183730 | -0.832009 | 1.206808e-55 | -8.615850e-47 |
| Msa0152190 | Msa0183730 | -0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0183730 | Msa0185540 | -0.812084 | 5.066111e-51 | -8.615850e-47 |
| Msa0183730 | Msa0186380 | -0.814891 | 1.222678e-51 | -8.615850e-47 |
| Msa0183730 | Msa0191470 | 0.803848 | 2.865324e-49 | -8.615850e-47 |
| Msa0183730 | Msa0219720 | -0.807142 | 5.840203e-50 | -8.615850e-47 |
| Msa0183730 | Msa0221180 | 0.824521 | 7.716050e-54 | -8.615850e-47 |
| Msa0183730 | Msa0227970 | -0.817896 | 2.599631e-52 | -8.615850e-47 |
| Msa0183730 | Msa0261020 | -0.800874 | 1.174446e-48 | -8.615850e-47 |
| Msa0183730 | Msa0264890 | 0.811338 | 7.359180e-51 | -8.615850e-47 |
| Msa0183730 | Msa0267450 | -0.806292 | 8.830974e-50 | -8.615850e-47 |
| Msa0183730 | Msa0267510 | -0.804424 | 2.174758e-49 | -8.615850e-47 |
| Msa0183730 | Msa0300470 | 0.817253 | 3.629804e-52 | -8.615850e-47 |
| Msa0183730 | Msa0307430 | 0.805729 | 1.159928e-49 | -8.615850e-47 |
| Msa0183730 | Msa0336550 | -0.811352 | 7.309465e-51 | -8.615850e-47 |
| Msa0183730 | Msa0337970 | 0.802093 | 6.607642e-49 | -8.615850e-47 |
| Msa0183730 | Msa0340270 | 0.814558 | 1.448969e-51 | -8.615850e-47 |
| Msa0183730 | Msa0340700 | -0.800627 | 1.319058e-48 | -8.615850e-47 |
| Msa0183730 | Msa0355990 | -0.814634 | 1.393930e-51 | -8.615850e-47 |
| Msa0183730 | Msa0369580 | -0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0183730 | Msa0385870 | -0.814374 | 1.591903e-51 | -8.615850e-47 |
| Msa0183730 | Msa0408490 | -0.819490 | 1.130028e-52 | -8.615850e-47 |
| Msa0183730 | Msa0422650 | 0.838604 | 2.604967e-57 | -8.615850e-47 |
| Msa0183730 | Msa0422740 | 0.827842 | 1.251039e-54 | -8.615850e-47 |
| Msa0183730 | Msa0422960 | 0.827179 | 1.805193e-54 | -8.615850e-47 |
| Msa0183730 | Msa0424940 | -0.812715 | 3.687646e-51 | -8.615850e-47 |
| Msa0183730 | Msa0428720 | -0.810980 | 8.802103e-51 | -8.615850e-47 |
| Msa0183730 | Msa0433090 | 0.849669 | 2.788586e-60 | -8.615850e-47 |
| Msa0183730 | Msa0460510 | -0.804722 | 1.885055e-49 | -8.615850e-47 |
| Msa0183730 | Msa0460950 | 0.826075 | 3.309340e-54 | -8.615850e-47 |
| Msa0183730 | Msa0463820 | -0.800959 | 1.128219e-48 | -8.615850e-47 |
| Msa0183730 | Msa0471130 | -0.808321 | 3.279716e-50 | -8.615850e-47 |
| Msa0183730 | Msa0472300 | -0.802817 | 4.686099e-49 | -8.615850e-47 |
| Msa0183730 | Msa0473740 | -0.800151 | 1.648994e-48 | -8.615850e-47 |
| Msa0183730 | Msa0475690 | -0.804891 | 1.737518e-49 | -8.615850e-47 |
| Msa0183730 | Msa0484590 | -0.807828 | 4.176466e-50 | -8.615850e-47 |
| Msa0183730 | Msa0487480 | -0.806963 | 6.373604e-50 | -8.615850e-47 |
| Msa0183730 | Msa0501540 | -0.822593 | 2.180119e-53 | -8.615850e-47 |
| Msa0183730 | Msa0514750 | 0.823084 | 1.675437e-53 | -8.615850e-47 |
| Msa0183730 | Msa0523400 | -0.811403 | 7.125878e-51 | -8.615850e-47 |
| Msa0183730 | Msa0524710 | 0.853249 | 2.707017e-61 | -8.615850e-47 |
| Msa0183730 | Msa0525180 | -0.804713 | 1.892805e-49 | -8.615850e-47 |
| Msa0183730 | Msa0538050 | -0.808353 | 3.228354e-50 | -8.615850e-47 |
| Msa0183730 | Msa0554770 | -0.826470 | 2.666268e-54 | -8.615850e-47 |
| Msa0183730 | Msa0559640 | -0.825429 | 4.710046e-54 | -8.615850e-47 |
| Msa0183730 | Msa0561830 | 0.803040 | 4.213629e-49 | -8.615850e-47 |
| Msa0183730 | Msa0572700 | 0.807505 | 4.890728e-50 | -8.615850e-47 |
| Msa0183730 | Msa0580410 | -0.804683 | 1.919948e-49 | -8.615850e-47 |
| Msa0183730 | Msa0580890 | -0.802952 | 4.395068e-49 | -8.615850e-47 |
| Msa0183730 | Msa0585720 | -0.809983 | 1.444623e-50 | -8.615850e-47 |
| Msa0183730 | Msa0597800 | 0.828731 | 7.637713e-55 | -8.615850e-47 |
| Msa0183730 | Msa0597820 | 0.814943 | 1.190809e-51 | -8.615850e-47 |
| Msa0183730 | Msa0598470 | -0.807140 | 5.844522e-50 | -8.615850e-47 |
| Msa0183730 | Msa0603600 | -0.842959 | 1.879719e-58 | -8.615850e-47 |
| Msa0183730 | Msa0605210 | -0.802631 | 5.117828e-49 | -8.615850e-47 |
| Msa0183730 | Msa0605520 | 0.809322 | 2.003401e-50 | -8.615850e-47 |
| Msa0183730 | Msa0612880 | -0.808530 | 2.960500e-50 | -8.615850e-47 |
| Msa0183730 | Msa0619300 | 0.827429 | 1.572057e-54 | -8.615850e-47 |
| Msa0183730 | Msa0619450 | -0.816492 | 5.377936e-52 | -8.615850e-47 |
| Msa0183730 | Msa0619530 | -0.810565 | 1.082060e-50 | -8.615850e-47 |
| Msa0183730 | Msa0622800 | -0.812256 | 4.646398e-51 | -8.615850e-47 |
| Msa0183730 | Msa0625900 | -0.812149 | 4.901186e-51 | -8.615850e-47 |
| Msa0183730 | Msa0644890 | -0.855592 | 5.687787e-62 | -8.615850e-47 |
| Msa0183730 | Msa0654500 | -0.819770 | 9.752150e-53 | -8.615850e-47 |
| Msa0183730 | Msa0655370 | 0.805718 | 1.166073e-49 | -8.615850e-47 |
| Msa0183730 | Msa0659580 | -0.817250 | 3.634543e-52 | -8.615850e-47 |
| Msa0183730 | Msa0663690 | -0.812398 | 4.326572e-51 | -8.615850e-47 |
| Msa0183730 | Msa0667680 | -0.801467 | 8.882590e-49 | -8.615850e-47 |
| Msa0183730 | Msa0677250 | -0.803639 | 3.167486e-49 | -8.615850e-47 |
| Msa0183730 | Msa0681100 | -0.808098 | 3.658883e-50 | -8.615850e-47 |
| Msa0183730 | Msa0684400 | -0.832372 | 9.815979e-56 | -8.615850e-47 |
| Msa0183730 | Msa0685390 | -0.816313 | 5.897115e-52 | -8.615850e-47 |
| Msa0183730 | Msa0704690 | 0.802466 | 5.537329e-49 | -8.615850e-47 |
| Msa0183730 | Msa0714230 | -0.857596 | 1.465785e-62 | -8.615850e-47 |
| Msa0183730 | Msa0729740 | -0.803022 | 4.250046e-49 | -8.615850e-47 |
| Msa0183730 | Msa0734700 | 0.801465 | 8.888400e-49 | -8.615850e-47 |
| Msa0183730 | Msa0739820 | -0.803246 | 3.820291e-49 | -8.615850e-47 |
| Msa0183730 | Msa0742690 | -0.838009 | 3.709674e-57 | -8.615850e-47 |
| Msa0183730 | Msa0743370 | 0.815686 | 8.142505e-52 | -8.615850e-47 |
| Msa0183730 | Msa0745630 | -0.824678 | 7.085201e-54 | -8.615850e-47 |
| Msa0183730 | Msa0749140 | 0.812865 | 3.419271e-51 | -8.615850e-47 |
| Msa0183730 | Msa0750200 | -0.814298 | 1.654310e-51 | -8.615850e-47 |
| Msa0183730 | Msa0750790 | 0.811822 | 5.775878e-51 | -8.615850e-47 |
| Msa0183730 | Msa0750830 | 0.810032 | 1.409977e-50 | -8.615850e-47 |
| Msa0183730 | Msa0755480 | -0.803945 | 2.735412e-49 | -8.615850e-47 |
| Msa0183730 | Msa0766910 | -0.817867 | 2.638505e-52 | -8.615850e-47 |
| Msa0183730 | Msa0779830 | -0.810636 | 1.044742e-50 | -8.615850e-47 |
| Msa0183730 | Msa0786600 | -0.818256 | 2.155329e-52 | -8.615850e-47 |
| Msa0183730 | Msa0792890 | 0.811800 | 5.839783e-51 | -8.615850e-47 |
| Msa0183730 | Msa0794900 | -0.806477 | 8.071966e-50 | -8.615850e-47 |
| Msa0183730 | Msa0795910 | -0.805299 | 1.427454e-49 | -8.615850e-47 |
| Msa0183730 | Msa0799150 | -0.809324 | 2.001649e-50 | -8.615850e-47 |
| Msa0183730 | Msa0813610 | 0.838772 | 2.357864e-57 | -8.615850e-47 |
| Msa0183730 | Msa0814660 | 0.813190 | 2.901107e-51 | -8.615850e-47 |
| Msa0183730 | Msa0817880 | -0.801348 | 9.394130e-49 | -8.615850e-47 |
| Msa0183730 | Msa0822680 | -0.841598 | 4.311196e-58 | -8.615850e-47 |
| Msa0183730 | Msa0827560 | -0.833219 | 6.047423e-56 | -8.615850e-47 |
| Msa0183730 | Msa0828350 | 0.821717 | 3.479894e-53 | -8.615850e-47 |
| Msa0183730 | Msa0828910 | 0.812076 | 5.084293e-51 | -8.615850e-47 |
| Msa0183730 | Msa0829250 | -0.811161 | 8.040984e-51 | -8.615850e-47 |
| Msa0183730 | Msa0829990 | 0.802018 | 6.844225e-49 | -8.615850e-47 |
| Msa0183730 | Msa0833360 | -0.803297 | 3.728897e-49 | -8.615850e-47 |
| Msa0183730 | Msa0847140 | 0.821883 | 3.185552e-53 | -8.615850e-47 |
| Msa0183730 | Msa0854230 | 0.817062 | 4.006715e-52 | -8.615850e-47 |
| Msa0183730 | Msa0862750 | -0.822723 | 2.033987e-53 | -8.615850e-47 |
| Msa0183730 | Msa0874750 | 0.808437 | 3.098871e-50 | -8.615850e-47 |
| Msa0183730 | Msa0878090 | -0.819435 | 1.163214e-52 | -8.615850e-47 |
| Msa0183730 | Msa0910560 | 0.816303 | 5.927795e-52 | -8.615850e-47 |
| Msa0183730 | Msa0937160 | -0.816648 | 4.963300e-52 | -8.615850e-47 |
| Msa0183730 | Msa0941150 | -0.800579 | 1.349019e-48 | -8.615850e-47 |
| Msa0183730 | Msa0943870 | -0.840179 | 1.016335e-57 | -8.615850e-47 |
| Msa0183730 | Msa0974410 | -0.809160 | 2.170405e-50 | -8.615850e-47 |
| Msa0183730 | Msa0978980 | 0.820108 | 8.164891e-53 | -8.615850e-47 |
| Msa0183730 | Msa0985380 | 0.812084 | 5.065042e-51 | -8.615850e-47 |
| Msa0183730 | Msa0985980 | -0.801473 | 8.856812e-49 | -8.615850e-47 |
| Msa0183730 | Msa1002550 | -0.807027 | 6.175953e-50 | -8.615850e-47 |
| Msa0183730 | Msa1017610 | -0.820030 | 8.507945e-53 | -8.615850e-47 |
| Msa0183730 | Msa1028890 | -0.801701 | 7.952533e-49 | -8.615850e-47 |
| Msa0183730 | Msa1039150 | -0.832124 | 1.130239e-55 | -8.615850e-47 |
| Msa0183730 | Msa1044520 | -0.805619 | 1.223023e-49 | -8.615850e-47 |
| Msa0183730 | Msa1057940 | -0.816080 | 6.649974e-52 | -8.615850e-47 |
| Msa0183730 | Msa1058280 | 0.803604 | 3.220280e-49 | -8.615850e-47 |
| Msa0183730 | Msa1058550 | -0.803881 | 2.820494e-49 | -8.615850e-47 |
| Msa0183730 | Msa1075090 | 0.807015 | 6.212225e-50 | -8.615850e-47 |
| Msa0183730 | Msa1078120 | -0.821514 | 3.877963e-53 | -8.615850e-47 |
| Msa0183730 | Msa1078210 | -0.807421 | 5.095558e-50 | -8.615850e-47 |
| Msa0183730 | Msa1083660 | -0.833452 | 5.290482e-56 | -8.615850e-47 |
| Msa0183730 | Msa1085820 | 0.858063 | 1.065390e-62 | -8.615850e-47 |
| Msa0183730 | Msa1123440 | -0.803988 | 2.679917e-49 | -8.615850e-47 |
| Msa0183730 | Msa1130150 | -0.803210 | 3.886648e-49 | -8.615850e-47 |
| Msa0183730 | Msa1132250 | -0.802827 | 4.663682e-49 | -8.615850e-47 |
| Msa0183730 | Msa1132880 | -0.805045 | 1.613464e-49 | -8.615850e-47 |
| Msa0183730 | Msa1136970 | -0.815340 | 9.721948e-52 | -8.615850e-47 |
| Msa0183730 | Msa1137750 | 0.820709 | 5.944181e-53 | -8.615850e-47 |
| Msa0183730 | Msa1156100 | -0.812623 | 3.863075e-51 | -8.615850e-47 |
| Msa0183730 | Msa1174450 | 0.802741 | 4.858139e-49 | -8.615850e-47 |
| Msa0183730 | Msa1191530 | -0.825519 | 4.486096e-54 | -8.615850e-47 |
| Msa0183730 | Msa1194480 | -0.827957 | 1.174094e-54 | -8.615850e-47 |
| Msa0183730 | Msa1199540 | -0.817342 | 3.465463e-52 | -8.615850e-47 |
| Msa0183730 | Msa1202220 | -0.817005 | 4.127209e-52 | -8.615850e-47 |
| Msa0183730 | Msa1204870 | -0.810210 | 1.290948e-50 | -8.615850e-47 |
| Msa0183730 | Msa1204900 | -0.813854 | 2.073565e-51 | -8.615850e-47 |
| Msa0183730 | Msa1212150 | -0.805023 | 1.630213e-49 | -8.615850e-47 |
| Msa0183730 | Msa1212210 | -0.805696 | 1.178439e-49 | -8.615850e-47 |
| Msa0183730 | Msa1224720 | 0.802970 | 4.356399e-49 | -8.615850e-47 |
| Msa0183730 | Msa1228600 | -0.807267 | 5.495822e-50 | -8.615850e-47 |
| Msa0183730 | Msa1256490 | -0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa0183730 | Msa1264300 | -0.810064 | 1.388017e-50 | -8.615850e-47 |
| Msa0183730 | Msa1266120 | -0.805866 | 1.085400e-49 | -8.615850e-47 |
| Msa0183730 | Msa1266740 | 0.813888 | 2.037770e-51 | -8.615850e-47 |
| Msa0183730 | Msa1279200 | -0.817368 | 3.420056e-52 | -8.615850e-47 |
| Msa0183730 | Msa1279250 | -0.800392 | 1.472329e-48 | -8.615850e-47 |
| Msa0183730 | Msa1280800 | 0.821018 | 5.045741e-53 | -8.615850e-47 |
| Msa0183730 | Msa1290090 | -0.850480 | 1.652779e-60 | -8.615850e-47 |
| Msa0183730 | Msa1296810 | -0.815850 | 7.484466e-52 | -8.615850e-47 |
| Msa0183730 | Msa1328680 | -0.820430 | 6.887949e-53 | -8.615850e-47 |
| Msa0183730 | Msa1334350 | -0.822599 | 2.173013e-53 | -8.615850e-47 |
| Msa0183730 | Msa1353020 | 0.869628 | 2.686117e-66 | -8.615850e-47 |
| Msa0183730 | Msa1363200 | 0.821435 | 4.043467e-53 | -8.615850e-47 |
| Msa0183730 | Msa1364690 | 0.830741 | 2.476072e-55 | -8.615850e-47 |
| Msa0183730 | Msa1369720 | 0.947472 | 6.297636e-106 | -8.615850e-47 |
| Msa0183730 | Msa1375640 | 0.806945 | 6.427212e-50 | -8.615850e-47 |
| Msa0183730 | Msa1376520 | 0.800023 | 1.750171e-48 | -8.615850e-47 |
| Msa0183730 | Msa1378020 | 0.814827 | 1.263583e-51 | -8.615850e-47 |
| Msa0183730 | Msa1379270 | -0.809523 | 1.814418e-50 | -8.615850e-47 |
| Msa0183730 | Msa1381300 | -0.831990 | 1.220328e-55 | -8.615850e-47 |
| Msa0183730 | Msa1386180 | -0.823400 | 1.413794e-53 | -8.615850e-47 |
| Msa0183730 | Msa1386910 | -0.803171 | 3.959634e-49 | -8.615850e-47 |
| Msa0183730 | Msa1387100 | -0.848769 | 4.961044e-60 | -8.615850e-47 |
| Msa0183730 | Msa1390200 | 0.808957 | 2.399383e-50 | -8.615850e-47 |
| Msa0183730 | Msa1392650 | -0.801726 | 7.858446e-49 | -8.615850e-47 |
| Msa0183730 | Msa1402340 | -0.820209 | 7.741471e-53 | -8.615850e-47 |
| Msa0183730 | Msa1408320 | 0.815748 | 7.887596e-52 | -8.615850e-47 |
| Msa0183730 | Msa1412450 | -0.800837 | 1.194939e-48 | -8.615850e-47 |
| Msa0183730 | Msa1422820 | -0.804482 | 2.114798e-49 | -8.615850e-47 |
| Msa0183730 | Msa1427600 | -0.811598 | 6.462848e-51 | -8.615850e-47 |
| Msa0183730 | Msa1427900 | -0.800255 | 1.570469e-48 | -8.615850e-47 |
| Msa0183730 | Msa1437590 | 0.853200 | 2.796195e-61 | -8.615850e-47 |
| Msa0183730 | Msa1439000 | -0.822555 | 2.225133e-53 | -8.615850e-47 |
| Msa0183730 | Msa1447140 | 0.934192 | 5.905012e-96 | -8.615850e-47 |
| Msa0183730 | Msa1451200 | -0.801637 | 8.197521e-49 | -8.615850e-47 |
| Msa0183730 | Msa1461840 | -0.807007 | 6.237769e-50 | -8.615850e-47 |
| Msa0183730 | Msa1463640 | 0.832983 | 6.924616e-56 | -8.615850e-47 |
| Msa0183730 | Msa1465350 | -0.800635 | 1.314010e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183730 | MtrunA17_Chr1g0210741 | 96.429 | 280 | 10 | 0 | 1 | 280 | 1 | 280 | 0.0 | 546 |
| Msa0183730 | MtrunA17_Chr2g0333871 | 61.792 | 212 | 81 | 0 | 69 | 280 | 79 | 290 | 1.82e-96 | 285 |
| Msa0183730 | MtrunA17_Chr4g0001421 | 61.792 | 212 | 81 | 0 | 69 | 280 | 82 | 293 | 2.82e-96 | 285 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183730 | AT5G04740.1 | 77.593 | 241 | 47 | 2 | 44 | 280 | 64 | 301 | 2.22e-133 | 379 |
| Msa0183730 | AT1G16880.1 | 58.986 | 217 | 89 | 0 | 64 | 280 | 74 | 290 | 5.20e-94 | 279 |
| Msa0183730 | AT5G04740.2 | 84.034 | 119 | 19 | 0 | 162 | 280 | 82 | 200 | 1.82e-70 | 216 |
| Msa0183730 | AT1G16880.2 | 59.829 | 117 | 47 | 0 | 64 | 180 | 74 | 190 | 1.75e-46 | 155 |
Find 90 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATGAAAGCATTAAAAGATT+TGG | 0.224631 | 1_4:+72730893 | Msa0183730:intron |
| AGGATTGTCTCACTTGTTCT+TGG | 0.248877 | 1_4:-72728282 | None:intergenic |
| TAACTATCAATATCTGTTTC+TGG | 0.249349 | 1_4:-72734036 | None:intergenic |
| GTGGGACACGAAATCAAATT+TGG | 0.301019 | 1_4:+72728007 | None:intergenic |
| ATGAAAGCATTAAAAGATTT+GGG | 0.302504 | 1_4:+72730894 | Msa0183730:CDS |
| TCTGTGTTTGAATTTATTTA+TGG | 0.310981 | 1_4:+72734238 | Msa0183730:three_prime_UTR |
| TAATTCTTACTGCAGATATC+TGG | 0.325647 | 1_4:+72730078 | Msa0183730:intron |
| CGAATGCTCTCTAACATATC+AGG | 0.337635 | 1_4:-72731642 | None:intergenic |
| TGCAACTCATATTCAAGTTA+AGG | 0.354573 | 1_4:+72733263 | Msa0183730:CDS |
| CTGCAATAGATTGTTGATAA+TGG | 0.357828 | 1_4:-72731670 | None:intergenic |
| GTGACTCAGTTCATTTGTTC+CGG | 0.369218 | 1_4:+72728089 | Msa0183730:five_prime_UTR |
| CCTCACAGGTGATAATAATA+TGG | 0.372412 | 1_4:-72734136 | None:intergenic |
| GATCGGAAAGGTTGGTGGTT+TGG | 0.376497 | 1_4:-72728202 | None:intergenic |
| GGGTGAAGTGTTTGGCATAA+AGG | 0.378690 | 1_4:+72731917 | Msa0183730:CDS |
| CATATTCAAGTTAAGGAAGA+TGG | 0.394527 | 1_4:+72733270 | Msa0183730:CDS |
| GATAAATTTCATGTCAGTTA+TGG | 0.404791 | 1_4:+72733699 | Msa0183730:CDS |
| CTTGTTCTTGGCGGAGGAAG+AGG | 0.411084 | 1_4:-72728270 | None:intergenic |
| CTAGCCCTGGGTGAAGTGTT+TGG | 0.426026 | 1_4:+72731909 | Msa0183730:CDS |
| ACAATTGTGCAACTTAGCTT+TGG | 0.428631 | 1_4:+72730165 | Msa0183730:CDS |
| CATAGATGCAAACCTCCTCT+TGG | 0.437658 | 1_4:-72733295 | None:intergenic |
| CTTAGCTTTGGTGATCGTCT+TGG | 0.437985 | 1_4:+72730177 | Msa0183730:CDS |
| TGGTGTACTCTCTGCGTAAC+CGG | 0.440630 | 1_4:-72728108 | None:intergenic |
| ACCCAGGGCTAGTTGTTCAC+TGG | 0.444688 | 1_4:-72731898 | None:intergenic |
| AGCATTAAAAGATTTGGGAT+TGG | 0.447652 | 1_4:+72730899 | Msa0183730:CDS |
| CAATATCTGTTTCTGGCGTC+CGG | 0.467240 | 1_4:-72734029 | None:intergenic |
| GTCTCACTTGTTCTTGGCGG+AGG | 0.468711 | 1_4:-72728276 | None:intergenic |
| TGATATATTGTCAGAGACAC+TGG | 0.474998 | 1_4:+72731603 | Msa0183730:intron |
| ATTGTCTCACTTGTTCTTGG+CGG | 0.475717 | 1_4:-72728279 | None:intergenic |
| GTGTTTGAATTTATTTATGG+TGG | 0.477827 | 1_4:+72734241 | Msa0183730:three_prime_UTR |
| TGCAGTAGATTCAGCTTCAC+TGG | 0.486587 | 1_4:+72729690 | Msa0183730:CDS |
| AAATTTCATGTCAGTTATGG+TGG | 0.491300 | 1_4:+72733702 | Msa0183730:CDS |
| GTCCAGTGAACAACTAGCCC+TGG | 0.492569 | 1_4:+72731896 | Msa0183730:CDS |
| TTTGGGATTGGATGTTTCAA+AGG | 0.494758 | 1_4:+72730911 | Msa0183730:CDS |
| TCTTGATCTATCAGTAGTAT+TGG | 0.502060 | 1_4:-72730126 | None:intergenic |
| ATAGATGCAAACCTCCTCTT+GGG | 0.508203 | 1_4:-72733294 | None:intergenic |
| GATTATTATACAAGTAAATG+AGG | 0.509086 | 1_4:-72734068 | None:intergenic |
| TTGGGATTGGATGTTTCAAA+GGG | 0.510420 | 1_4:+72730912 | Msa0183730:CDS |
| GTTGGTGGTTTGGACGGAGA+AGG | 0.514145 | 1_4:-72728192 | None:intergenic |
| ATTAAACAGATCAATGTCTC+AGG | 0.515343 | 1_4:+72733731 | Msa0183730:CDS |
| TCTATCAGTAGTATTGGCAT+TGG | 0.516810 | 1_4:-72730120 | None:intergenic |
| CGGAGGAAGAGGAACGGAAG+GGG | 0.520724 | 1_4:-72728259 | None:intergenic |
| ATGTGAGATGTGTGCCTCAC+AGG | 0.522074 | 1_4:-72734150 | None:intergenic |
| ATCGAGACAGCAGATAGGCC+AGG | 0.530479 | 1_4:+72733498 | Msa0183730:CDS |
| CATAAAGGCTCCAGAAAAGA+AGG | 0.531380 | 1_4:+72731932 | Msa0183730:CDS |
| AATTTCATGTCAGTTATGGT+GGG | 0.532815 | 1_4:+72733703 | Msa0183730:CDS |
| GCTTTACTGCTACCAGATTG+TGG | 0.535932 | 1_4:+72734185 | Msa0183730:three_prime_UTR |
| AAGAAAGTGTGAGAGGAAAG+AGG | 0.537675 | 1_4:-72728236 | None:intergenic |
| GGCGGAGGAAGAGGAACGGA+AGG | 0.540883 | 1_4:-72728261 | None:intergenic |
| GGAGAGCGGATCGGAAAGGT+TGG | 0.545261 | 1_4:-72728210 | None:intergenic |
| GGAAAGGTTGGTGGTTTGGA+CGG | 0.553350 | 1_4:-72728198 | None:intergenic |
| ATAATATGGAGCTGACACTT+TGG | 0.554267 | 1_4:-72734122 | None:intergenic |
| AGTGTGAGAGGAAAGAGGAA+AGG | 0.557002 | 1_4:-72728231 | None:intergenic |
| ATATTCAAGTTAAGGAAGAT+GGG | 0.558978 | 1_4:+72733271 | Msa0183730:CDS |
| ATTATTTCAACTAGCAACCC+TGG | 0.562653 | 1_4:-72733516 | None:intergenic |
| AAGGGAACTGTCTCCACTGA+GGG | 0.564408 | 1_4:+72730930 | Msa0183730:CDS |
| GAGCGGATCGGAAAGGTTGG+TGG | 0.564465 | 1_4:-72728207 | None:intergenic |
| TCTGCAGGGTTTGATTGCTA+AGG | 0.568190 | 1_4:+72733677 | Msa0183730:intron |
| TGTACATCGAGACAGCAGAT+AGG | 0.569651 | 1_4:+72733493 | Msa0183730:CDS |
| TTGCTTCACTGGTCCCTCAG+TGG | 0.572490 | 1_4:-72730943 | None:intergenic |
| GAATGCATTGGTCAAAGCCA+TGG | 0.578850 | 1_4:-72728159 | None:intergenic |
| ACTGTCTGCGTTACTACCTC+CGG | 0.580821 | 1_4:+72734010 | Msa0183730:CDS |
| GCGGAGGAAGAGGAACGGAA+GGG | 0.583061 | 1_4:-72728260 | None:intergenic |
| TCCAGTGAACAACTAGCCCT+GGG | 0.584632 | 1_4:+72731897 | Msa0183730:CDS |
| ATTTCATGTCAGTTATGGTG+GGG | 0.585354 | 1_4:+72733704 | Msa0183730:CDS |
| TCGAGACAGCAGATAGGCCA+GGG | 0.587797 | 1_4:+72733499 | Msa0183730:CDS |
| GAAGGGGAAGAAAGTGTGAG+AGG | 0.588589 | 1_4:-72728243 | None:intergenic |
| GGAAGGAGCGATGAATGCAT+TGG | 0.595269 | 1_4:-72728171 | None:intergenic |
| GTGGTTTGGACGGAGAAGGA+AGG | 0.600105 | 1_4:-72728188 | None:intergenic |
| AGGAAGATGGGCCCAAGAGG+AGG | 0.600783 | 1_4:+72733283 | Msa0183730:CDS |
| GAAAGGAGAGCGGATCGGAA+AGG | 0.603753 | 1_4:-72728214 | None:intergenic |
| TCTTGGAGCTCTTCTTGACA+CGG | 0.610014 | 1_4:+72730194 | Msa0183730:CDS |
| AAGAGGAAAGGAGAGCGGAT+CGG | 0.611115 | 1_4:-72728219 | None:intergenic |
| CGTCATCATCATCTCCGCCA+TGG | 0.611932 | 1_4:+72728142 | Msa0183730:exon |
| ATGATGACGACGATGGAAGT+TGG | 0.613337 | 1_4:-72728128 | None:intergenic |
| TAAATAAATTCAAACACAGA+CGG | 0.614280 | 1_4:-72734235 | None:intergenic |
| TTAAGGAAGATGGGCCCAAG+AGG | 0.615605 | 1_4:+72733280 | Msa0183730:CDS |
| ACAGATATTGATAGTTACTG+AGG | 0.615661 | 1_4:+72734042 | Msa0183730:CDS |
| TATGCCAAACACTTCACCCA+GGG | 0.626733 | 1_4:-72731913 | None:intergenic |
| TATCTGTTTCTGGCGTCCGG+AGG | 0.629851 | 1_4:-72734026 | None:intergenic |
| TTATGCCAAACACTTCACCC+AGG | 0.646264 | 1_4:-72731914 | None:intergenic |
| GATATATTGTCAGAGACACT+GGG | 0.648692 | 1_4:+72731604 | Msa0183730:intron |
| GGAGATGATGATGACGACGA+TGG | 0.652386 | 1_4:-72728135 | None:intergenic |
| TGTGAACATTGATGTTGAGT+CGG | 0.660513 | 1_4:+72733554 | Msa0183730:CDS |
| CAGATATTGATAGTTACTGA+GGG | 0.663496 | 1_4:+72734043 | Msa0183730:CDS |
| GAGGAAAGAGGAAAGGAGAG+CGG | 0.672416 | 1_4:-72728224 | None:intergenic |
| TCTTGGCGGAGGAAGAGGAA+CGG | 0.684378 | 1_4:-72728265 | None:intergenic |
| GTCGGCTGAGATCGATACAG+AGG | 0.702999 | 1_4:+72733572 | Msa0183730:CDS |
| AAAGGGAACTGTCTCCACTG+AGG | 0.707401 | 1_4:+72730929 | Msa0183730:CDS |
| TGCATTGGTCAAAGCCATGG+CGG | 0.711267 | 1_4:-72728156 | None:intergenic |
| CCATATTATTATCACCTGTG+AGG | 0.728472 | 1_4:+72734136 | Msa0183730:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAATAAAAAATAAAA+CGG | - | chr1_4:72732799-72732818 | None:intergenic | 0.0% |
| !! | AATCAAAAAAAAAAAAAAGT+TGG | - | chr1_4:72728308-72728327 | None:intergenic | 10.0% |
| !!! | CTTTTTTTTTTTTTTGATTT+AGG | + | chr1_4:72728309-72728328 | Msa0183730:intron | 10.0% |
| !! | AAAAATATACTTATGAAATA+TGG | - | chr1_4:72728814-72728833 | None:intergenic | 10.0% |
| !!! | AATAAATAAAGGTATAATAA+TGG | + | chr1_4:72729310-72729329 | Msa0183730:intron | 10.0% |
| !! | ATTTATGTTAATTATTACAA+AGG | + | chr1_4:72731222-72731241 | Msa0183730:intron | 10.0% |
| !!! | TATAATTATTTTACAGAATA+AGG | - | chr1_4:72732345-72732364 | None:intergenic | 10.0% |
| !!! | TTAATTATTTGATATTTTTG+TGG | + | chr1_4:72732412-72732431 | Msa0183730:intron | 10.0% |
| !!! | ATTAATTGTGTTAATTTTGA+TGG | + | chr1_4:72729215-72729234 | Msa0183730:intron | 15.0% |
| !!! | ATTTTGAGAAAAAGAAAAAA+TGG | + | chr1_4:72729461-72729480 | Msa0183730:intron | 15.0% |
| !!! | ATACATATCATTACTATTTT+CGG | + | chr1_4:72729789-72729808 | Msa0183730:intron | 15.0% |
| !! | ATACACTTAGTAATAATATA+GGG | - | chr1_4:72730562-72730581 | None:intergenic | 15.0% |
| !! | AATACACTTAGTAATAATAT+AGG | - | chr1_4:72730563-72730582 | None:intergenic | 15.0% |
| !! | AATTTAATAATAATTGCAAC+TGG | - | chr1_4:72731420-72731439 | None:intergenic | 15.0% |
| !! | TAGGAAAAATTGAAAATTAA+GGG | - | chr1_4:72731839-72731858 | None:intergenic | 15.0% |
| !!! | TATATTTATATATTTTGTCC+AGG | + | chr1_4:72731872-72731891 | Msa0183730:intron | 15.0% |
| !! | ATTATTATTGAAAGAACTAA+AGG | + | chr1_4:72732905-72732924 | Msa0183730:intron | 15.0% |
| !!! | TTGCTTTTTATATTTTACTT+TGG | + | chr1_4:72733333-72733352 | Msa0183730:intron | 15.0% |
| !!! | TGCTTTTTATATTTTACTTT+GGG | + | chr1_4:72733334-72733353 | Msa0183730:intron | 15.0% |
| !!! | CAAGTTAATGATTTTTTTAT+CGG | + | chr1_4:72733934-72733953 | Msa0183730:intron | 15.0% |
| !! | CAAAAAAAAAAAAAAGTTGG+AGG | - | chr1_4:72728305-72728324 | None:intergenic | 20.0% |
| !! | TTTGAGAACTTATGAAAATA+AGG | - | chr1_4:72728670-72728689 | None:intergenic | 20.0% |
| !! | AATTAAGCTGTTTATTCAAA+CGG | + | chr1_4:72728775-72728794 | Msa0183730:intron | 20.0% |
| !! | GGATGAAATTCAATAAATAA+AGG | + | chr1_4:72729299-72729318 | Msa0183730:intron | 20.0% |
| !! | TGCAATAAAGTGATAATAAT+GGG | - | chr1_4:72729734-72729753 | None:intergenic | 20.0% |
| !!! | ATTTCACTTCTTTTCATTTT+GGG | + | chr1_4:72729756-72729775 | Msa0183730:intron | 20.0% |
| !!! | TACATATCATTACTATTTTC+GGG | + | chr1_4:72729790-72729809 | Msa0183730:intron | 20.0% |
| !! | AAATATTGTACATAAAAGCA+AGG | - | chr1_4:72730040-72730059 | None:intergenic | 20.0% |
| !!! | TTTTTTAATTGATGGTACAT+AGG | + | chr1_4:72730366-72730385 | Msa0183730:intron | 20.0% |
| !!! | AATGATACTATTCTCATTTT+GGG | + | chr1_4:72730471-72730490 | Msa0183730:intron | 20.0% |
| !! | TACACTTAGTAATAATATAG+GGG | - | chr1_4:72730561-72730580 | None:intergenic | 20.0% |
| !! | ATGATATTATCTCTTTATGA+AGG | + | chr1_4:72730623-72730642 | Msa0183730:intron | 20.0% |
| !! | AACATAATAAAACAAACCTT+CGG | - | chr1_4:72730650-72730669 | None:intergenic | 20.0% |
| !!! | ATGAAAGCATTAAAAGATTT+GGG | + | chr1_4:72730894-72730913 | Msa0183730:CDS | 20.0% |
| !! | TAAGAAATACAGTTACTTAT+TGG | + | chr1_4:72731441-72731460 | Msa0183730:intron | 20.0% |
| !! | TATAAAAGTTGCTAATTACA+AGG | - | chr1_4:72731769-72731788 | None:intergenic | 20.0% |
| !! | ATATTTATAAAGAAAACTCG+TGG | - | chr1_4:72731793-72731812 | None:intergenic | 20.0% |
| !! | GTAGGAAAAATTGAAAATTA+AGG | - | chr1_4:72731840-72731859 | None:intergenic | 20.0% |
| !! | TTTAGGAAATAAAAAATGCA+AGG | - | chr1_4:72731981-72732000 | None:intergenic | 20.0% |
| !! | TTTATGAACACTTAGAATTT+GGG | - | chr1_4:72732154-72732173 | None:intergenic | 20.0% |
| !! | ATTTATGAACACTTAGAATT+TGG | - | chr1_4:72732155-72732174 | None:intergenic | 20.0% |
| !!! | ATAGTGTTGTTTGTTTATTT+TGG | + | chr1_4:72732362-72732381 | Msa0183730:intron | 20.0% |
| !!! | TAGTGTTGTTTGTTTATTTT+GGG | + | chr1_4:72732363-72732382 | Msa0183730:intron | 20.0% |
| !!! | TTCAATTTTTAAGTGGAATA+TGG | - | chr1_4:72732465-72732484 | None:intergenic | 20.0% |
| !! | CAAATTATAAAAATCAGTTG+GGG | - | chr1_4:72733398-72733417 | None:intergenic | 20.0% |
| !! | GCAAATTATAAAAATCAGTT+GGG | - | chr1_4:72733399-72733418 | None:intergenic | 20.0% |
| !! | TGCAAATTATAAAAATCAGT+TGG | - | chr1_4:72733400-72733419 | None:intergenic | 20.0% |
| !!! | TAGATGATGGAATAAAAATT+AGG | + | chr1_4:72733836-72733855 | Msa0183730:intron | 20.0% |
| !! | GATTATTATACAAGTAAATG+AGG | - | chr1_4:72734071-72734090 | None:intergenic | 20.0% |
| !! | TAAATAAATTCAAACACAGA+CGG | - | chr1_4:72734238-72734257 | None:intergenic | 20.0% |
| !! | TCTGTGTTTGAATTTATTTA+TGG | + | chr1_4:72734238-72734257 | Msa0183730:three_prime_UTR | 20.0% |
| ! | AAACAACACTCAAATATCAA+AGG | - | chr1_4:72728389-72728408 | None:intergenic | 25.0% |
| !! | TTTGATATTTGAGTGTTGTT+TGG | + | chr1_4:72728388-72728407 | Msa0183730:intron | 25.0% |
| ! | TTGGATTAATGATGAAAGAA+TGG | + | chr1_4:72728407-72728426 | Msa0183730:intron | 25.0% |
| ! | ATTAAGCTGTTTATTCAAAC+GGG | + | chr1_4:72728776-72728795 | Msa0183730:intron | 25.0% |
| ! | ATTCGACCATACTAAAAAAA+TGG | + | chr1_4:72728867-72728886 | Msa0183730:intron | 25.0% |
| !!! | AAACCACCATTTTTTTAGTA+TGG | - | chr1_4:72728876-72728895 | None:intergenic | 25.0% |
| ! | ATACTAAAAAAATGGTGGTT+TGG | + | chr1_4:72728875-72728894 | Msa0183730:intron | 25.0% |
| ! | CCACTAACTACAATTAATAA+GGG | - | chr1_4:72729267-72729286 | None:intergenic | 25.0% |
| ! | TCCACTAACTACAATTAATA+AGG | - | chr1_4:72729268-72729287 | None:intergenic | 25.0% |
| ! | AAAGAAGATTAAAGTTCCAA+TGG | - | chr1_4:72729575-72729594 | None:intergenic | 25.0% |
| ! | AAACAGATATAGATACCTTA+TGG | - | chr1_4:72729608-72729627 | None:intergenic | 25.0% |
| !! | TACTAATTGAAATTTTGTGC+AGG | + | chr1_4:72729635-72729654 | Msa0183730:intron | 25.0% |
| ! | CTGCAATAAAGTGATAATAA+TGG | - | chr1_4:72729735-72729754 | None:intergenic | 25.0% |
| ! | CATTATTATCACTTTATTGC+AGG | + | chr1_4:72729733-72729752 | Msa0183730:intron | 25.0% |
| !! | GATTTCACTTCTTTTCATTT+TGG | + | chr1_4:72729755-72729774 | Msa0183730:intron | 25.0% |
| ! | ATACACTAAAGAGATTCAAT+TGG | - | chr1_4:72730273-72730292 | None:intergenic | 25.0% |
| ! | AATAACAAAATCACACTTCA+AGG | - | chr1_4:72730302-72730321 | None:intergenic | 25.0% |
| !! | CAATGATACTATTCTCATTT+TGG | + | chr1_4:72730470-72730489 | Msa0183730:intron | 25.0% |
| ! | ACACTTAGTAATAATATAGG+GGG | - | chr1_4:72730560-72730579 | None:intergenic | 25.0% |
| ! | CACATGAAATTAACAAAATG+AGG | - | chr1_4:72730766-72730785 | None:intergenic | 25.0% |
| ! | TGAAAATTACGAGTCTTTAT+GGG | + | chr1_4:72730784-72730803 | Msa0183730:intron | 25.0% |
| !!! | GATGAAAGCATTAAAAGATT+TGG | + | chr1_4:72730893-72730912 | Msa0183730:intron | 25.0% |
| !!! | AAAAATTTTGTTTGCTTCAC+TGG | - | chr1_4:72730957-72730976 | None:intergenic | 25.0% |
| ! | AACAATGCTAACAAAAATGA+AGG | - | chr1_4:72731012-72731031 | None:intergenic | 25.0% |
| ! | ATCAACAAAATTCGATATGT+CGG | - | chr1_4:72731139-72731158 | None:intergenic | 25.0% |
| ! | TTTGTTCTTGTATTTCTTGT+TGG | + | chr1_4:72731378-72731397 | Msa0183730:intron | 25.0% |
| !!! | TCATTGTCTACTATTTTTCA+TGG | + | chr1_4:72731539-72731558 | Msa0183730:intron | 25.0% |
| ! | AATATATAATACTCGTGAGT+AGG | - | chr1_4:72731858-72731877 | None:intergenic | 25.0% |
| ! | AGATTGCAAATATTTGTAAC+TGG | + | chr1_4:72732067-72732086 | Msa0183730:intron | 25.0% |
| ! | GTTATGCAACTAAAATAAAG+TGG | - | chr1_4:72732193-72732212 | None:intergenic | 25.0% |
| ! | CACTAATTGTTAGTAACTAA+AGG | - | chr1_4:72732217-72732236 | None:intergenic | 25.0% |
| ! | CTTTAGTTACTAACAATTAG+TGG | + | chr1_4:72732215-72732234 | Msa0183730:intron | 25.0% |
| ! | AGATTATTAAGCTAATCTTG+CGG | + | chr1_4:72732314-72732333 | Msa0183730:intron | 25.0% |
| !!! | AATTTTTAAGTGGAATATGG+CGG | - | chr1_4:72732462-72732481 | None:intergenic | 25.0% |
| ! | TAAATAGTATTCAAGCACTT+GGG | + | chr1_4:72732492-72732511 | Msa0183730:intron | 25.0% |
| ! | ATGCTAGAATTTAAGTAGTT+TGG | - | chr1_4:72732555-72732574 | None:intergenic | 25.0% |
| ! | TACTATTGAAGATTAACTGA+TGG | + | chr1_4:72732736-72732755 | Msa0183730:intron | 25.0% |
| ! | GTTCTTTCAATAATAATGTC+CGG | - | chr1_4:72732902-72732921 | None:intergenic | 25.0% |
| ! | TTATTGAAAGAACTAAAGGT+TGG | + | chr1_4:72732909-72732928 | Msa0183730:intron | 25.0% |
| ! | TATTGAAAGAACTAAAGGTT+GGG | + | chr1_4:72732910-72732929 | Msa0183730:intron | 25.0% |
| ! | AACTTATACTAAAAGATGCT+TGG | + | chr1_4:72733024-72733043 | Msa0183730:intron | 25.0% |
| !! | ATATTCAAGTTAAGGAAGAT+GGG | + | chr1_4:72733271-72733290 | Msa0183730:CDS | 25.0% |
| ! | GATAAATTTCATGTCAGTTA+TGG | + | chr1_4:72733699-72733718 | Msa0183730:CDS | 25.0% |
| !!! | TAAATTGCTTTTCAACACAA+TGG | - | chr1_4:72733760-72733779 | None:intergenic | 25.0% |
| ! | TTGAAAAGCAATTTAGATGT+TGG | + | chr1_4:72733765-72733784 | Msa0183730:intron | 25.0% |
| ! | ATAGTTTCATAGATAGATGA+TGG | + | chr1_4:72733823-72733842 | Msa0183730:intron | 25.0% |
| !!! | GAAGTTCAATTGTTGTTTAT+TGG | + | chr1_4:72733897-72733916 | Msa0183730:intron | 25.0% |
| ! | TAACTATCAATATCTGTTTC+TGG | - | chr1_4:72734039-72734058 | None:intergenic | 25.0% |
| ! | GTGTTTGAATTTATTTATGG+TGG | + | chr1_4:72734241-72734260 | Msa0183730:three_prime_UTR | 25.0% |
| !! | TAATGTTGTTGACTTCACTA+TGG | + | chr1_4:72728450-72728469 | Msa0183730:intron | 30.0% |
| !!! | AAGTTTTGTTGTGACTTATG+AGG | + | chr1_4:72728582-72728601 | Msa0183730:intron | 30.0% |
| TTAAGCTGTTTATTCAAACG+GGG | + | chr1_4:72728777-72728796 | Msa0183730:intron | 30.0% | |
| AAGTTAGCAAGAATGAGTAA+CGG | - | chr1_4:72729050-72729069 | None:intergenic | 30.0% | |
| ACGTGCATAAACTTAAACAA+CGG | - | chr1_4:72729154-72729173 | None:intergenic | 30.0% | |
| AGGTTTATGCACGATTATTA+AGG | + | chr1_4:72729187-72729206 | Msa0183730:intron | 30.0% | |
| CCCTTATTAATTGTAGTTAG+TGG | + | chr1_4:72729264-72729283 | Msa0183730:intron | 30.0% | |
| AAGAGACAATTATTGTGAGA+CGG | + | chr1_4:72729486-72729505 | Msa0183730:intron | 30.0% | |
| TTAACAAAAGCTCAGATTCT+TGG | - | chr1_4:72729975-72729994 | None:intergenic | 30.0% | |
| TAATTCTTACTGCAGATATC+TGG | + | chr1_4:72730078-72730097 | Msa0183730:intron | 30.0% | |
| TCTTGATCTATCAGTAGTAT+TGG | - | chr1_4:72730129-72730148 | None:intergenic | 30.0% | |
| TGTTCCAAGTCGTTATAAAA+GGG | + | chr1_4:72730390-72730409 | Msa0183730:intron | 30.0% | |
| CACTTAGTAATAATATAGGG+GGG | - | chr1_4:72730559-72730578 | None:intergenic | 30.0% | |
| TTACTAAGTGTATTATCCCA+AGG | + | chr1_4:72730569-72730588 | Msa0183730:intron | 30.0% | |
| ATAACAAAGAGCTTAACCAT+AGG | - | chr1_4:72730605-72730624 | None:intergenic | 30.0% | |
| TAACAAAATGAGGAGAAATG+AGG | - | chr1_4:72730756-72730775 | None:intergenic | 30.0% | |
| GTGAAAATTACGAGTCTTTA+TGG | + | chr1_4:72730783-72730802 | Msa0183730:intron | 30.0% | |
| ! | AGCATTAAAAGATTTGGGAT+TGG | + | chr1_4:72730899-72730918 | Msa0183730:CDS | 30.0% |
| TTAGCATTGTTTACTCTTGA+TGG | + | chr1_4:72731021-72731040 | Msa0183730:intron | 30.0% | |
| ! | AGAAAACTTTTCCTGTTTTG+TGG | + | chr1_4:72731062-72731081 | Msa0183730:intron | 30.0% |
| AATCAATCATAAGTGGGAAA+AGG | - | chr1_4:72731170-72731189 | None:intergenic | 30.0% | |
| ! | ACAAAGGTATATGTGTCAAT+TGG | + | chr1_4:72731238-72731257 | Msa0183730:intron | 30.0% |
| ATAGACGTTGTTGCAAAATT+TGG | + | chr1_4:72731282-72731301 | Msa0183730:intron | 30.0% | |
| ! | CTGCAATAGATTGTTGATAA+TGG | - | chr1_4:72731673-72731692 | None:intergenic | 30.0% |
| TATTTACACAGCATACATAC+AGG | - | chr1_4:72731702-72731721 | None:intergenic | 30.0% | |
| !! | TACTAACAATTAGTGGACTT+AGG | + | chr1_4:72732222-72732241 | Msa0183730:intron | 30.0% |
| !! | CCAGATGTTCAATTTTTAAG+TGG | - | chr1_4:72732472-72732491 | None:intergenic | 30.0% |
| CCACTTAAAAATTGAACATC+TGG | + | chr1_4:72732469-72732488 | Msa0183730:intron | 30.0% | |
| GTAAATAGTATTCAAGCACT+TGG | + | chr1_4:72732491-72732510 | Msa0183730:intron | 30.0% | |
| AAATAGTATTCAAGCACTTG+GGG | + | chr1_4:72732493-72732512 | Msa0183730:intron | 30.0% | |
| !! | CCTTGATAGCTTTCTTTTAA+GGG | - | chr1_4:72732525-72732544 | None:intergenic | 30.0% |
| CCTTAAAAGAAAGCTATCAA+GGG | + | chr1_4:72732523-72732542 | Msa0183730:intron | 30.0% | |
| CTTAAAAGAAAGCTATCAAG+GGG | + | chr1_4:72732524-72732543 | Msa0183730:intron | 30.0% | |
| ATTCCCACAACAAGTTATAT+GGG | - | chr1_4:72732578-72732597 | None:intergenic | 30.0% | |
| AATTCCCACAACAAGTTATA+TGG | - | chr1_4:72732579-72732598 | None:intergenic | 30.0% | |
| !! | ATATAACTTGTTGTGGGAAT+TGG | + | chr1_4:72732578-72732597 | Msa0183730:intron | 30.0% |
| ! | GTATATATGATGGAAGTATG+AGG | + | chr1_4:72732761-72732780 | Msa0183730:intron | 30.0% |
| !! | TTTCTGTGTTTTATTATCGC+CGG | + | chr1_4:72732880-72732899 | Msa0183730:intron | 30.0% |
| ! | TGCAACTCATATTCAAGTTA+AGG | + | chr1_4:72733263-72733282 | Msa0183730:CDS | 30.0% |
| ! | CATATTCAAGTTAAGGAAGA+TGG | + | chr1_4:72733270-72733289 | Msa0183730:CDS | 30.0% |
| ! | GGTAAAGTTACTTTGAGTAA+TGG | - | chr1_4:72733644-72733663 | None:intergenic | 30.0% |
| AAATTTCATGTCAGTTATGG+TGG | + | chr1_4:72733702-72733721 | Msa0183730:CDS | 30.0% | |
| AATTTCATGTCAGTTATGGT+GGG | + | chr1_4:72733703-72733722 | Msa0183730:CDS | 30.0% | |
| ATTAAACAGATCAATGTCTC+AGG | + | chr1_4:72733731-72733750 | Msa0183730:CDS | 30.0% | |
| ! | ACAGATATTGATAGTTACTG+AGG | + | chr1_4:72734042-72734061 | Msa0183730:CDS | 30.0% |
| ! | CAGATATTGATAGTTACTGA+GGG | + | chr1_4:72734043-72734062 | Msa0183730:CDS | 30.0% |
| !!! | CACATTTTAATTCCACAATC+TGG | - | chr1_4:72734200-72734219 | None:intergenic | 30.0% |
| GATAAGCTGAAAAAAGTCGA+TGG | - | chr1_4:72728553-72728572 | None:intergenic | 35.0% | |
| GGTCGAATGACAAGAAAAAA+AGG | - | chr1_4:72728855-72728874 | None:intergenic | 35.0% | |
| CGACCATACTAAAAAAATGG+TGG | + | chr1_4:72728870-72728889 | Msa0183730:intron | 35.0% | |
| ACAAATTCTATTCCTTGCCA+AGG | + | chr1_4:72728916-72728935 | Msa0183730:intron | 35.0% | |
| TTTAGTAGTCATCCTCACTA+TGG | + | chr1_4:72728972-72728991 | Msa0183730:intron | 35.0% | |
| AGTTAGCAAGAATGAGTAAC+GGG | - | chr1_4:72729049-72729068 | None:intergenic | 35.0% | |
| GTTACTCATTCTTGCTAACT+TGG | + | chr1_4:72729049-72729068 | Msa0183730:intron | 35.0% | |
| GTAAATCTGATCAGTAACAG+TGG | - | chr1_4:72729109-72729128 | None:intergenic | 35.0% | |
| GGCTATTATTTAGAGATGGA+GGG | - | chr1_4:72729133-72729152 | None:intergenic | 35.0% | |
| CAACGGCTATTATTTAGAGA+TGG | - | chr1_4:72729137-72729156 | None:intergenic | 35.0% | |
| CGTGCATAAACCTTAAACAA+CGG | - | chr1_4:72729180-72729199 | None:intergenic | 35.0% | |
| AGTTAGTGGAGTAGTTAAGT+TGG | + | chr1_4:72729278-72729297 | Msa0183730:intron | 35.0% | |
| ACCAATTAATTCGTGTGAGA+CGG | + | chr1_4:72729516-72729535 | Msa0183730:intron | 35.0% | |
| TCTTTAGTAGAGTCACCATA+AGG | + | chr1_4:72729590-72729609 | Msa0183730:intron | 35.0% | |
| TATTCCTTATATTCACCCTC+TGG | + | chr1_4:72729996-72730015 | Msa0183730:intron | 35.0% | |
| !! | TCTATCAGTAGTATTGGCAT+TGG | - | chr1_4:72730123-72730142 | None:intergenic | 35.0% |
| ACAATTGTGCAACTTAGCTT+TGG | + | chr1_4:72730165-72730184 | Msa0183730:CDS | 35.0% | |
| CTGTTCCAAGTCGTTATAAA+AGG | + | chr1_4:72730389-72730408 | Msa0183730:intron | 35.0% | |
| GTTCCAAGTCGTTATAAAAG+GGG | + | chr1_4:72730391-72730410 | Msa0183730:intron | 35.0% | |
| ! | TTTGGGATTGGATGTTTCAA+AGG | + | chr1_4:72730911-72730930 | Msa0183730:CDS | 35.0% |
| TTGGGATTGGATGTTTCAAA+GGG | + | chr1_4:72730912-72730931 | Msa0183730:CDS | 35.0% | |
| ! | CATTGTTTACTCTTGATGGT+TGG | + | chr1_4:72731025-72731044 | Msa0183730:intron | 35.0% |
| AGTCGCAATCAATCATAAGT+GGG | - | chr1_4:72731176-72731195 | None:intergenic | 35.0% | |
| AAGTCGCAATCAATCATAAG+TGG | - | chr1_4:72731177-72731196 | None:intergenic | 35.0% | |
| ! | CAACGTCTATGATTTGTAAG+TGG | - | chr1_4:72731272-72731291 | None:intergenic | 35.0% |
| ATAGCATGTCGAACATATGA+AGG | + | chr1_4:72731495-72731514 | Msa0183730:intron | 35.0% | |
| TGATATATTGTCAGAGACAC+TGG | + | chr1_4:72731603-72731622 | Msa0183730:intron | 35.0% | |
| GATATATTGTCAGAGACACT+GGG | + | chr1_4:72731604-72731623 | Msa0183730:intron | 35.0% | |
| AATTACAAGGAAGCTTCTCA+TGG | - | chr1_4:72731756-72731775 | None:intergenic | 35.0% | |
| ! | GGACTATTTACCTTCTTTTC+TGG | - | chr1_4:72731945-72731964 | None:intergenic | 35.0% |
| ATGCAAGGAAATACTAGAAG+AGG | - | chr1_4:72731966-72731985 | None:intergenic | 35.0% | |
| !! | CCTCATGAAACTGATTTGTA+AGG | - | chr1_4:72732116-72732135 | None:intergenic | 35.0% |
| CCTTACAAATCAGTTTCATG+AGG | + | chr1_4:72732113-72732132 | Msa0183730:intron | 35.0% | |
| TGAACACTTAGAATTTGGGT+TGG | - | chr1_4:72732150-72732169 | None:intergenic | 35.0% | |
| ATAAAAATGCTAGCGATGCT+GGG | + | chr1_4:72732283-72732302 | Msa0183730:intron | 35.0% | |
| ! | TGTGGCCAATTTAGTACTTT+TGG | + | chr1_4:72732430-72732449 | Msa0183730:intron | 35.0% |
| ! | GTGGCCAATTTAGTACTTTT+GGG | + | chr1_4:72732431-72732450 | Msa0183730:intron | 35.0% |
| !! | AGGTCCCAAAAGTACTAAAT+TGG | - | chr1_4:72732438-72732457 | None:intergenic | 35.0% |
| !! | GATAGCTTTCTTTTAAGGGA+GGG | - | chr1_4:72732521-72732540 | None:intergenic | 35.0% |
| !! | TGATAGCTTTCTTTTAAGGG+AGG | - | chr1_4:72732522-72732541 | None:intergenic | 35.0% |
| CCCTTAAAAGAAAGCTATCA+AGG | + | chr1_4:72732522-72732541 | Msa0183730:intron | 35.0% | |
| !! | CCCTTGATAGCTTTCTTTTA+AGG | - | chr1_4:72732526-72732545 | None:intergenic | 35.0% |
| !! | CATCCCATATAACTTGTTGT+GGG | + | chr1_4:72732572-72732591 | Msa0183730:intron | 35.0% |
| ATGCCTCTTTCTATTTGAAG+AGG | + | chr1_4:72732674-72732693 | Msa0183730:intron | 35.0% | |
| ACTGATGGCTGTATATATGA+TGG | + | chr1_4:72732751-72732770 | Msa0183730:intron | 35.0% | |
| AAGCATAAAGAATGCTAGAG+TGG | - | chr1_4:72732861-72732880 | None:intergenic | 35.0% | |
| GTGCTCTTCAAAAAGAGTTA+AGG | - | chr1_4:72733124-72733143 | None:intergenic | 35.0% | |
| AAATTGCAGCATGCAATATC+TGG | - | chr1_4:72733180-72733199 | None:intergenic | 35.0% | |
| TCAAACACCTATCGCATATT+GGG | - | chr1_4:72733430-72733449 | None:intergenic | 35.0% | |
| ATCAAACACCTATCGCATAT+TGG | - | chr1_4:72733431-72733450 | None:intergenic | 35.0% | |
| ATTATTTCAACTAGCAACCC+TGG | - | chr1_4:72733519-72733538 | None:intergenic | 35.0% | |
| TGTGAACATTGATGTTGAGT+CGG | + | chr1_4:72733554-72733573 | Msa0183730:CDS | 35.0% | |
| ATTTCATGTCAGTTATGGTG+GGG | + | chr1_4:72733704-72733723 | Msa0183730:CDS | 35.0% | |
| GTTTGATCATCCTTTATCAG+AGG | + | chr1_4:72733787-72733806 | Msa0183730:intron | 35.0% | |
| ATTACTTGCACAACAATCTC+AGG | + | chr1_4:72733978-72733997 | Msa0183730:intron | 35.0% | |
| ATAATATGGAGCTGACACTT+TGG | - | chr1_4:72734125-72734144 | None:intergenic | 35.0% | |
| CCTCACAGGTGATAATAATA+TGG | - | chr1_4:72734139-72734158 | None:intergenic | 35.0% | |
| CCATATTATTATCACCTGTG+AGG | + | chr1_4:72734136-72734155 | Msa0183730:three_prime_UTR | 35.0% | |
| GTGACTCAGTTCATTTGTTC+CGG | + | chr1_4:72728089-72728108 | Msa0183730:five_prime_UTR | 40.0% | |
| ! | AAGAAAGTGTGAGAGGAAAG+AGG | - | chr1_4:72728239-72728258 | None:intergenic | 40.0% |
| ATTGTCTCACTTGTTCTTGG+CGG | - | chr1_4:72728282-72728301 | None:intergenic | 40.0% | |
| AGGATTGTCTCACTTGTTCT+TGG | - | chr1_4:72728285-72728304 | None:intergenic | 40.0% | |
| GACTTCACTATGGATCGAAT+AGG | + | chr1_4:72728460-72728479 | Msa0183730:intron | 40.0% | |
| TTGTGACTTATGAGGCAGTT+TGG | + | chr1_4:72728590-72728609 | Msa0183730:intron | 40.0% | |
| AGAATTTGTAACCTCGACTC+AGG | - | chr1_4:72728905-72728924 | None:intergenic | 40.0% | |
| ATTCTATTCCTTGCCAAGGA+TGG | + | chr1_4:72728920-72728939 | Msa0183730:intron | 40.0% | |
| ATGAATAACCAGCTGAATGC+CGG | - | chr1_4:72729007-72729026 | None:intergenic | 40.0% | |
| GTTAGCAAGAATGAGTAACG+GGG | - | chr1_4:72729048-72729067 | None:intergenic | 40.0% | |
| CGGCTATTATTTAGAGATGG+AGG | - | chr1_4:72729134-72729153 | None:intergenic | 40.0% | |
| TGCACGTTATCCGTTGTTTA+AGG | + | chr1_4:72729167-72729186 | Msa0183730:intron | 40.0% | |
| AGACAATTATTGTGAGACGG+AGG | + | chr1_4:72729489-72729508 | Msa0183730:intron | 40.0% | |
| GACAATTATTGTGAGACGGA+GGG | + | chr1_4:72729490-72729509 | Msa0183730:intron | 40.0% | |
| TCCGTCTCACACGAATTAAT+TGG | - | chr1_4:72729520-72729539 | None:intergenic | 40.0% | |
| AATTAATTCGTGTGAGACGG+AGG | + | chr1_4:72729519-72729538 | Msa0183730:intron | 40.0% | |
| ATTAATTCGTGTGAGACGGA+GGG | + | chr1_4:72729520-72729539 | Msa0183730:intron | 40.0% | |
| CAATGGTGTTCACAAACAAC+TGG | - | chr1_4:72729558-72729577 | None:intergenic | 40.0% | |
| CAGTTGTTTGTGAACACCAT+TGG | + | chr1_4:72729556-72729575 | Msa0183730:intron | 40.0% | |
| AGCTGTGGTGTAAAGCAATA+TGG | - | chr1_4:72729824-72729843 | None:intergenic | 40.0% | |
| ! | TTTGTGCTGGTGTAAGATAG+TGG | + | chr1_4:72729924-72729943 | Msa0183730:intron | 40.0% |
| AAGACCAGAGGGTGAATATA+AGG | - | chr1_4:72730003-72730022 | None:intergenic | 40.0% | |
| ACCAGTCTAAAAAGACCAGA+GGG | - | chr1_4:72730014-72730033 | None:intergenic | 40.0% | |
| TACCAGTCTAAAAAGACCAG+AGG | - | chr1_4:72730015-72730034 | None:intergenic | 40.0% | |
| TATAAAAGGGGCCTGTGTTT+AGG | + | chr1_4:72730403-72730422 | Msa0183730:intron | 40.0% | |
| GGGGAAAACTACTTACAACT+AGG | - | chr1_4:72730540-72730559 | None:intergenic | 40.0% | |
| CATAGGACAAGATCATCCTT+GGG | - | chr1_4:72730588-72730607 | None:intergenic | 40.0% | |
| ATCTCTTTATGAAGGTCCGA+AGG | + | chr1_4:72730631-72730650 | Msa0183730:intron | 40.0% | |
| ! | AGGCTTGTTCGTTAAGTAGA+TGG | - | chr1_4:72730736-72730755 | None:intergenic | 40.0% |
| TATGCTTTACTTGGCTGTCT+AGG | + | chr1_4:72730811-72730830 | Msa0183730:intron | 40.0% | |
| CGAATGCTCTCTAACATATC+AGG | - | chr1_4:72731645-72731664 | None:intergenic | 40.0% | |
| CATAAAGGCTCCAGAAAAGA+AGG | + | chr1_4:72731932-72731951 | Msa0183730:CDS | 40.0% | |
| !! | TTTTAGGTAGACCTCTGCTT+CGG | + | chr1_4:72732019-72732038 | Msa0183730:intron | 40.0% |
| ! | TAAAGTGGTGATGACTGACA+AGG | - | chr1_4:72732178-72732197 | None:intergenic | 40.0% |
| TGGACTTAGGTAGTTAGAGA+GGG | + | chr1_4:72732235-72732254 | Msa0183730:intron | 40.0% | |
| TAGTTAGAGAGGGTTAGAGT+AGG | + | chr1_4:72732245-72732264 | Msa0183730:intron | 40.0% | |
| CATAAAAATGCTAGCGATGC+TGG | + | chr1_4:72732282-72732301 | Msa0183730:intron | 40.0% | |
| !! | GCATCCCATATAACTTGTTG+TGG | + | chr1_4:72732571-72732590 | Msa0183730:intron | 40.0% |
| TGTAATGTATGAGGTTGACG+GGG | - | chr1_4:72732624-72732643 | None:intergenic | 40.0% | |
| CTGTAATGTATGAGGTTGAC+GGG | - | chr1_4:72732625-72732644 | None:intergenic | 40.0% | |
| CCTGTAATGTATGAGGTTGA+CGG | - | chr1_4:72732626-72732645 | None:intergenic | 40.0% | |
| TCAGTCTCCTGTAATGTATG+AGG | - | chr1_4:72732633-72732652 | None:intergenic | 40.0% | |
| CCACCTCTTCAAATAGAAAG+AGG | - | chr1_4:72732680-72732699 | None:intergenic | 40.0% | |
| CCTCTTTCTATTTGAAGAGG+TGG | + | chr1_4:72732677-72732696 | Msa0183730:intron | 40.0% | |
| GCTGCATCGGAAAAAGATTT+AGG | + | chr1_4:72732699-72732718 | Msa0183730:intron | 40.0% | |
| TTGGGCTGCTTAATTGATAC+TGG | + | chr1_4:72732928-72732947 | Msa0183730:intron | 40.0% | |
| ATAGATGCAAACCTCCTCTT+GGG | - | chr1_4:72733297-72733316 | None:intergenic | 40.0% | |
| ATTGCAACCCAATATGCGAT+AGG | + | chr1_4:72733420-72733439 | Msa0183730:intron | 40.0% | |
| AACTGAAAGTCAGAGACAGA+CGG | - | chr1_4:72733620-72733639 | None:intergenic | 40.0% | |
| ! | TGCACAACAATCTCAGGTTT+TGG | + | chr1_4:72733984-72734003 | Msa0183730:intron | 40.0% |
| ! | ATGATGACGACGATGGAAGT+TGG | - | chr1_4:72728131-72728150 | None:intergenic | 45.0% |
| ! | GAATGCATTGGTCAAAGCCA+TGG | - | chr1_4:72728162-72728181 | None:intergenic | 45.0% |
| AGTGTGAGAGGAAAGAGGAA+AGG | - | chr1_4:72728234-72728253 | None:intergenic | 45.0% | |
| TATTCCTTGCCAAGGATGGA+GGG | + | chr1_4:72728924-72728943 | Msa0183730:intron | 45.0% | |
| TAGTCATCCTCACTATGGAC+AGG | + | chr1_4:72728977-72728996 | Msa0183730:intron | 45.0% | |
| GTCTCCAATCCTAGAAAACC+TGG | + | chr1_4:72729073-72729092 | Msa0183730:intron | 45.0% | |
| !!! | TGAGCCAGGTTTTCTAGGAT+TGG | - | chr1_4:72729080-72729099 | None:intergenic | 45.0% |
| TGCAGTAGATTCAGCTTCAC+TGG | + | chr1_4:72729690-72729709 | Msa0183730:CDS | 45.0% | |
| !! | ACCCTCTGGTCTTTTTAGAC+TGG | + | chr1_4:72730010-72730029 | Msa0183730:intron | 45.0% |
| !! | CTTAGCTTTGGTGATCGTCT+TGG | + | chr1_4:72730177-72730196 | Msa0183730:CDS | 45.0% |
| TCTTGGAGCTCTTCTTGACA+CGG | + | chr1_4:72730194-72730213 | Msa0183730:CDS | 45.0% | |
| TGACACGGTGATGTGGTTAT+TGG | + | chr1_4:72730209-72730228 | Msa0183730:intron | 45.0% | |
| GACACGGTGATGTGGTTATT+GGG | + | chr1_4:72730210-72730229 | Msa0183730:intron | 45.0% | |
| ! | AGGCCCCTTTTATAACGACT+TGG | - | chr1_4:72730397-72730416 | None:intergenic | 45.0% |
| ACAACTAGGTGACTGTCATG+TGG | - | chr1_4:72730526-72730545 | None:intergenic | 45.0% | |
| CCATAGGACAAGATCATCCT+TGG | - | chr1_4:72730589-72730608 | None:intergenic | 45.0% | |
| CCAAGGATGATCTTGTCCTA+TGG | + | chr1_4:72730586-72730605 | Msa0183730:intron | 45.0% | |
| ATGGGCCTCTATGCTTTACT+TGG | + | chr1_4:72730802-72730821 | Msa0183730:intron | 45.0% | |
| GACAGCCAAGTAAAGCATAG+AGG | - | chr1_4:72730810-72730829 | None:intergenic | 45.0% | |
| TATGCCAAACACTTCACCCA+GGG | - | chr1_4:72731916-72731935 | None:intergenic | 45.0% | |
| TTATGCCAAACACTTCACCC+AGG | - | chr1_4:72731917-72731936 | None:intergenic | 45.0% | |
| ! | GGGTGAAGTGTTTGGCATAA+AGG | + | chr1_4:72731917-72731936 | Msa0183730:CDS | 45.0% |
| TTTAGGTAGACCTCTGCTTC+GGG | + | chr1_4:72732020-72732039 | Msa0183730:intron | 45.0% | |
| AAGAAAAAACCCCGAAGCAG+AGG | - | chr1_4:72732033-72732052 | None:intergenic | 45.0% | |
| GTGGACTTAGGTAGTTAGAG+AGG | + | chr1_4:72732234-72732253 | Msa0183730:intron | 45.0% | |
| TTTAAGTGGAATATGGCGGC+AGG | - | chr1_4:72732458-72732477 | None:intergenic | 45.0% | |
| CCGTCAACCTCATACATTAC+AGG | + | chr1_4:72732623-72732642 | Msa0183730:intron | 45.0% | |
| ATTTGAAGAGGTGGCTGCAT+CGG | + | chr1_4:72732686-72732705 | Msa0183730:intron | 45.0% | |
| CATAGATGCAAACCTCCTCT+TGG | - | chr1_4:72733298-72733317 | None:intergenic | 45.0% | |
| AGAGGAGGTTTGCATCTATG+TGG | + | chr1_4:72733298-72733317 | Msa0183730:intron | 45.0% | |
| TGTACATCGAGACAGCAGAT+AGG | + | chr1_4:72733493-72733512 | Msa0183730:CDS | 45.0% | |
| CCTGCAGAGCGAAAAAAAGT+GGG | - | chr1_4:72733665-72733684 | None:intergenic | 45.0% | |
| !!! | CCACTTTTTTTCGCTCTGCA+GGG | + | chr1_4:72733663-72733682 | Msa0183730:intron | 45.0% |
| TCTGCAGGGTTTGATTGCTA+AGG | + | chr1_4:72733677-72733696 | Msa0183730:intron | 45.0% | |
| CACTCTACAGCCTCTGATAA+AGG | - | chr1_4:72733800-72733819 | None:intergenic | 45.0% | |
| !! | CAATATCTGTTTCTGGCGTC+CGG | - | chr1_4:72734032-72734051 | None:intergenic | 45.0% |
| GCTTTACTGCTACCAGATTG+TGG | + | chr1_4:72734185-72734204 | Msa0183730:three_prime_UTR | 45.0% | |
| !! | ATAATTAATAATAGTTAATA+AGG | + | chr1_4:72729375-72729394 | Msa0183730:intron | 5.0% |
| !!! | TTTTTTTTTTTTTTAATTGA+TGG | + | chr1_4:72730358-72730377 | Msa0183730:intron | 5.0% |
| !!! | TTTTATTGTTAATATTTAAA+TGG | + | chr1_4:72732813-72732832 | Msa0183730:intron | 5.0% |
| TGGTGTACTCTCTGCGTAAC+CGG | - | chr1_4:72728111-72728130 | None:intergenic | 50.0% | |
| ! | GGAGATGATGATGACGACGA+TGG | - | chr1_4:72728138-72728157 | None:intergenic | 50.0% |
| ! | TGCATTGGTCAAAGCCATGG+CGG | - | chr1_4:72728159-72728178 | None:intergenic | 50.0% |
| GGAAGGAGCGATGAATGCAT+TGG | - | chr1_4:72728174-72728193 | None:intergenic | 50.0% | |
| !! | GGAAAGGTTGGTGGTTTGGA+CGG | - | chr1_4:72728201-72728220 | None:intergenic | 50.0% |
| !! | GATCGGAAAGGTTGGTGGTT+TGG | - | chr1_4:72728205-72728224 | None:intergenic | 50.0% |
| AAGAGGAAAGGAGAGCGGAT+CGG | - | chr1_4:72728222-72728241 | None:intergenic | 50.0% | |
| GAGGAAAGAGGAAAGGAGAG+CGG | - | chr1_4:72728227-72728246 | None:intergenic | 50.0% | |
| ! | GAAGGGGAAGAAAGTGTGAG+AGG | - | chr1_4:72728246-72728265 | None:intergenic | 50.0% |
| CTATTCCTTGCCAAGGATGG+AGG | + | chr1_4:72728923-72728942 | Msa0183730:intron | 50.0% | |
| CTCACTATGGACAGGCTATC+CGG | + | chr1_4:72728985-72729004 | Msa0183730:intron | 50.0% | |
| GCACACAAGCTACACATGTG+TGG | - | chr1_4:72729851-72729870 | None:intergenic | 50.0% | |
| GTCTGTGTCTGAGTTTGTGC+TGG | + | chr1_4:72729911-72729930 | Msa0183730:intron | 50.0% | |
| CTCTTCTTGACACGGTGATG+TGG | + | chr1_4:72730202-72730221 | Msa0183730:intron | 50.0% | |
| GCTGTCAACAGCCTAAACAC+AGG | - | chr1_4:72730417-72730436 | None:intergenic | 50.0% | |
| GTGACTGTCATGTGGATGTC+GGG | - | chr1_4:72730518-72730537 | None:intergenic | 50.0% | |
| GGTGACTGTCATGTGGATGT+CGG | - | chr1_4:72730519-72730538 | None:intergenic | 50.0% | |
| AAAGGGAACTGTCTCCACTG+AGG | + | chr1_4:72730929-72730948 | Msa0183730:CDS | 50.0% | |
| AAGGGAACTGTCTCCACTGA+GGG | + | chr1_4:72730930-72730949 | Msa0183730:CDS | 50.0% | |
| CTCACGCTACACCACAAAAC+AGG | - | chr1_4:72731076-72731095 | None:intergenic | 50.0% | |
| CTAGTTGTTCACTGGACTCC+TGG | - | chr1_4:72731893-72731912 | None:intergenic | 50.0% | |
| TCCAGTGAACAACTAGCCCT+GGG | + | chr1_4:72731897-72731916 | Msa0183730:CDS | 50.0% | |
| TTAGGTAGACCTCTGCTTCG+GGG | + | chr1_4:72732021-72732040 | Msa0183730:intron | 50.0% | |
| ACGGGGACTTGGGTATTATG+GGG | - | chr1_4:72732607-72732626 | None:intergenic | 50.0% | |
| GACGGGGACTTGGGTATTAT+GGG | - | chr1_4:72732608-72732627 | None:intergenic | 50.0% | |
| TGACGGGGACTTGGGTATTA+TGG | - | chr1_4:72732609-72732628 | None:intergenic | 50.0% | |
| TATGAGGTTGACGGGGACTT+GGG | - | chr1_4:72732617-72732636 | None:intergenic | 50.0% | |
| TTAAGGAAGATGGGCCCAAG+AGG | + | chr1_4:72733280-72733299 | Msa0183730:CDS | 50.0% | |
| !!! | CCCACTTTTTTTCGCTCTGC+AGG | + | chr1_4:72733662-72733681 | Msa0183730:intron | 50.0% |
| CCCTGCAGAGCGAAAAAAAG+TGG | - | chr1_4:72733666-72733685 | None:intergenic | 50.0% | |
| ACTGTCTGCGTTACTACCTC+CGG | + | chr1_4:72734010-72734029 | Msa0183730:CDS | 50.0% | |
| ATGTGAGATGTGTGCCTCAC+AGG | - | chr1_4:72734153-72734172 | None:intergenic | 50.0% | |
| CGTCATCATCATCTCCGCCA+TGG | + | chr1_4:72728142-72728161 | Msa0183730:exon | 55.0% | |
| ! | GTGGTTTGGACGGAGAAGGA+AGG | - | chr1_4:72728191-72728210 | None:intergenic | 55.0% |
| !! | GTTGGTGGTTTGGACGGAGA+AGG | - | chr1_4:72728195-72728214 | None:intergenic | 55.0% |
| GAAAGGAGAGCGGATCGGAA+AGG | - | chr1_4:72728217-72728236 | None:intergenic | 55.0% | |
| TCTTGGCGGAGGAAGAGGAA+CGG | - | chr1_4:72728268-72728287 | None:intergenic | 55.0% | |
| CTTGTTCTTGGCGGAGGAAG+AGG | - | chr1_4:72728273-72728292 | None:intergenic | 55.0% | |
| GTCTCACTTGTTCTTGGCGG+AGG | - | chr1_4:72728279-72728298 | None:intergenic | 55.0% | |
| CGGATAGCCTGTCCATAGTG+AGG | - | chr1_4:72728987-72729006 | None:intergenic | 55.0% | |
| ! | TGCGCTGAGCCAGGTTTTCT+AGG | - | chr1_4:72729085-72729104 | None:intergenic | 55.0% |
| ! | CACATGTGTGGTGTCAGCTG+TGG | - | chr1_4:72729839-72729858 | None:intergenic | 55.0% |
| TTGCTTCACTGGTCCCTCAG+TGG | - | chr1_4:72730946-72730965 | None:intergenic | 55.0% | |
| GTCCAGTGAACAACTAGCCC+TGG | + | chr1_4:72731896-72731915 | Msa0183730:CDS | 55.0% | |
| !! | ACCCAGGGCTAGTTGTTCAC+TGG | - | chr1_4:72731901-72731920 | None:intergenic | 55.0% |
| ! | CTAGCCCTGGGTGAAGTGTT+TGG | + | chr1_4:72731909-72731928 | Msa0183730:CDS | 55.0% |
| GTATGAGGTTGACGGGGACT+TGG | - | chr1_4:72732618-72732637 | None:intergenic | 55.0% | |
| ATCGAGACAGCAGATAGGCC+AGG | + | chr1_4:72733498-72733517 | Msa0183730:CDS | 55.0% | |
| TCGAGACAGCAGATAGGCCA+GGG | + | chr1_4:72733499-72733518 | Msa0183730:CDS | 55.0% | |
| GTCGGCTGAGATCGATACAG+AGG | + | chr1_4:72733572-72733591 | Msa0183730:CDS | 55.0% | |
| AGTCAGAGACAGACGGAAGC+AGG | - | chr1_4:72733613-72733632 | None:intergenic | 55.0% | |
| !! | TATCTGTTTCTGGCGTCCGG+AGG | - | chr1_4:72734029-72734048 | None:intergenic | 55.0% |
| GAGCGGATCGGAAAGGTTGG+TGG | - | chr1_4:72728210-72728229 | None:intergenic | 60.0% | |
| GGAGAGCGGATCGGAAAGGT+TGG | - | chr1_4:72728213-72728232 | None:intergenic | 60.0% | |
| CGGAGGAAGAGGAACGGAAG+GGG | - | chr1_4:72728262-72728281 | None:intergenic | 60.0% | |
| GCGGAGGAAGAGGAACGGAA+GGG | - | chr1_4:72728263-72728282 | None:intergenic | 60.0% | |
| ! | GGTTTGGTTCGCCTGAGTCG+AGG | + | chr1_4:72728891-72728910 | Msa0183730:intron | 60.0% |
| TCCTTGCCAAGGATGGAGGG+AGG | + | chr1_4:72728927-72728946 | Msa0183730:intron | 60.0% | |
| CCTTGCCAAGGATGGAGGGA+GGG | + | chr1_4:72728928-72728947 | Msa0183730:intron | 60.0% | |
| CTTGCCAAGGATGGAGGGAG+GGG | + | chr1_4:72728929-72728948 | Msa0183730:intron | 60.0% | |
| TTGCCAAGGATGGAGGGAGG+GGG | + | chr1_4:72728930-72728949 | Msa0183730:intron | 60.0% | |
| CAGGCTATCCGGCATTCAGC+TGG | + | chr1_4:72728996-72729015 | Msa0183730:intron | 60.0% | |
| AGGAAGATGGGCCCAAGAGG+AGG | + | chr1_4:72733283-72733302 | Msa0183730:CDS | 60.0% | |
| CAGACGGAAGCAGGACAGAG+AGG | - | chr1_4:72733604-72733623 | None:intergenic | 60.0% | |
| GGCGGAGGAAGAGGAACGGA+AGG | - | chr1_4:72728264-72728283 | None:intergenic | 65.0% | |
| CCCTCCCTCCATCCTTGGCA+AGG | - | chr1_4:72728931-72728950 | None:intergenic | 65.0% | |
| ATGGAGGGAGGGGGTGGCTA+CGG | + | chr1_4:72728939-72728958 | Msa0183730:intron | 65.0% | |
| AACAGTGGCTGCGCTGAGCC+AGG | - | chr1_4:72729094-72729113 | None:intergenic | 65.0% | |
| CCACCCCCTCCCTCCATCCT+TGG | - | chr1_4:72728936-72728955 | None:intergenic | 70.0% | |
| CCAAGGATGGAGGGAGGGGG+TGG | + | chr1_4:72728933-72728952 | Msa0183730:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 72728011 | 72734265 | 72728011 | ID=Msa0183730;Name=Msa0183730 |
| chr1_4 | mRNA | 72728011 | 72734265 | 72728011 | ID=Msa0183730-mRNA-1;Parent=Msa0183730;Name=Msa0183730-mRNA-1;_AED=0.10;_eAED=0.10;_QI=150|1|1|1|1|1|10|203|280 |
| chr1_4 | exon | 72728011 | 72728291 | 72728011 | ID=Msa0183730-mRNA-1:exon:24633;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72729657 | 72729711 | 72729657 | ID=Msa0183730-mRNA-1:exon:24634;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72730093 | 72730215 | 72730093 | ID=Msa0183730-mRNA-1:exon:24635;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72730894 | 72730988 | 72730894 | ID=Msa0183730-mRNA-1:exon:24636;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72731617 | 72731701 | 72731617 | ID=Msa0183730-mRNA-1:exon:24637;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72731894 | 72731953 | 72731894 | ID=Msa0183730-mRNA-1:exon:24638;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72733249 | 72733304 | 72733249 | ID=Msa0183730-mRNA-1:exon:24639;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72733488 | 72733593 | 72733488 | ID=Msa0183730-mRNA-1:exon:24640;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72733684 | 72733752 | 72733684 | ID=Msa0183730-mRNA-1:exon:24641;Parent=Msa0183730-mRNA-1 |
| chr1_4 | exon | 72734000 | 72734265 | 72734000 | ID=Msa0183730-mRNA-1:exon:24642;Parent=Msa0183730-mRNA-1 |
| chr1_4 | five_prime_UTR | 72728011 | 72728160 | 72728011 | ID=Msa0183730-mRNA-1:five_prime_utr;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72728161 | 72728291 | 72728161 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72729657 | 72729711 | 72729657 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72730093 | 72730215 | 72730093 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72730894 | 72730988 | 72730894 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72731617 | 72731701 | 72731617 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72731894 | 72731953 | 72731894 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72733249 | 72733304 | 72733249 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72733488 | 72733593 | 72733488 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72733684 | 72733752 | 72733684 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | CDS | 72734000 | 72734062 | 72734000 | ID=Msa0183730-mRNA-1:cds;Parent=Msa0183730-mRNA-1 |
| chr1_4 | three_prime_UTR | 72734063 | 72734265 | 72734063 | ID=Msa0183730-mRNA-1:three_prime_utr;Parent=Msa0183730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
