AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1085820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085820 MtrunA17_Chr3g0138671 97.792 634 4 1 1 634 1 624 0.0 1277
Msa1085820 MtrunA17_Chr4g0063141 50.203 492 237 4 20 509 23 508 1.91e-165 496
Msa1085820 MtrunA17_Chr8g0356081 41.282 671 331 10 23 634 20 686 5.82e-162 480
Msa1085820 MtrunA17_Chr2g0277651 45.437 504 266 5 17 519 39 534 4.07e-145 441
Msa1085820 MtrunA17_Chr1g0148981 42.442 516 233 6 39 496 48 557 5.57e-131 409
Msa1085820 MtrunA17_Chr3g0138131 49.081 381 185 4 40 417 59 433 8.31e-121 367
Msa1085820 MtrunA17_Chr2g0286031 50.538 372 172 2 131 502 21 380 1.44e-116 363
Msa1085820 MtrunA17_Chr5g0434371 36.152 473 283 9 40 502 78 541 8.39e-91 299
Msa1085820 MtrunA17_Chr4g0063071 28.846 260 172 4 269 519 5 260 3.92e-29 116
Msa1085820 MtrunA17_Chr2g0286041 46.903 113 59 1 13 125 21 132 1.94e-27 107
Msa1085820 MtrunA17_Chr4g0062561 27.650 217 149 3 79 295 4 212 9.01e-19 90.9
Msa1085820 MtrunA17_Chr4g0062571 28.571 217 142 4 79 295 4 207 1.65e-18 85.1
Msa1085820 MtrunA17_Chr4g0001481 25.123 203 149 2 243 442 380 582 2.39e-16 83.2
Msa1085820 MtrunA17_Chr4g0073941 21.996 491 292 15 39 442 91 577 2.57e-16 82.8
Msa1085820 MtrunA17_Chr4g0063081 31.694 183 115 4 56 234 3 179 7.66e-15 73.6
Msa1085820 MtrunA17_Chr8g0347121 23.153 203 153 2 243 442 337 539 6.39e-14 75.1
Msa1085820 MtrunA17_Chr1g0158861 21.145 454 280 14 92 472 143 591 7.77e-14 75.1
Msa1085820 MtrunA17_Chr1g0181121 22.831 219 165 3 241 455 314 532 2.92e-13 73.2
Msa1085820 MtrunA17_Chr4g0028861 22.120 217 165 3 243 455 396 612 2.66e-12 70.1
Msa1085820 MtrunA17_Chr7g0275581 25.980 204 146 3 243 442 358 560 5.15e-12 68.9
Msa1085820 MtrunA17_Chr3g0125651 22.167 203 155 2 243 442 315 517 9.53e-12 68.2
Msa1085820 MtrunA17_Chr3g0126541 22.059 204 154 3 243 442 353 555 1.07e-11 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1085820 AT4G32650.3 59.048 630 243 7 8 633 42 660 0.0 704
Msa1085820 AT4G32650.1 58.216 639 235 8 8 633 42 661 0.0 703
Msa1085820 AT4G32650.2 59.567 554 212 4 8 551 42 593 0.0 642
Msa1085820 AT5G46240.1 42.057 661 330 8 15 632 23 673 3.56e-166 491
Msa1085820 AT2G26650.1 44.580 572 276 8 20 559 26 588 1.22e-161 485
Msa1085820 AT4G18290.1 49.068 483 242 3 21 503 29 507 6.46e-150 450
Msa1085820 AT4G18290.2 49.068 483 242 3 21 503 40 518 8.57e-150 450
Msa1085820 AT4G32500.1 45.674 497 260 4 20 511 43 534 1.03e-146 447
Msa1085820 AT2G25600.1 45.766 496 259 5 20 511 47 536 5.57e-145 443
Msa1085820 AT4G22200.2 45.248 484 260 5 17 498 39 519 1.35e-135 410
Msa1085820 AT4G22200.1 45.436 482 258 5 17 496 39 517 1.72e-133 410
Msa1085820 AT2G26650.2 44.444 486 231 7 101 584 1 449 1.43e-131 404
Msa1085820 AT3G02850.3 35.667 457 277 7 44 491 74 522 1.27e-92 298
Msa1085820 AT3G02850.2 35.667 457 277 7 44 491 74 522 1.60e-91 299
Msa1085820 AT3G02850.1 35.667 457 277 7 44 491 74 522 5.49e-91 300
Msa1085820 AT5G37500.4 35.730 459 278 7 42 491 55 505 1.19e-88 291
Msa1085820 AT5G37500.1 35.730 459 278 7 42 491 55 505 4.95e-88 291
Msa1085820 AT5G37500.2 35.730 459 278 7 42 491 55 505 8.69e-88 291
Msa1085820 AT5G37500.3 35.477 451 274 7 50 491 9 451 7.26e-85 282
Msa1085820 AT1G19780.2 24.390 205 152 2 241 442 164 368 2.39e-15 79.7
Msa1085820 AT1G19780.1 24.390 205 152 2 241 442 375 579 4.04e-15 79.7
Msa1085820 AT1G15990.1 23.902 205 153 2 241 442 369 573 9.88e-15 78.2
Msa1085820 AT5G57940.3 23.645 203 152 2 243 442 360 562 1.03e-13 75.1
Msa1085820 AT5G57940.1 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa1085820 AT5G57940.2 23.645 203 152 2 243 442 367 569 1.06e-13 75.1
Msa1085820 AT2G46430.1 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa1085820 AT2G46430.2 23.333 210 158 2 237 443 340 549 3.27e-13 73.2
Msa1085820 AT4G30560.5 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1085820 AT4G30560.2 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1085820 AT4G30560.3 22.967 209 158 2 237 442 350 558 1.44e-12 71.2
Msa1085820 AT4G30560.1 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa1085820 AT4G30560.4 22.967 209 158 2 237 442 376 584 1.50e-12 71.2
Msa1085820 AT2G23980.6 22.439 205 156 2 241 442 354 558 5.94e-12 69.3
Msa1085820 AT2G23980.9 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1085820 AT2G23980.10 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1085820 AT2G23980.1 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1085820 AT2G23980.4 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1085820 AT2G23980.5 22.439 205 156 2 241 442 381 585 6.12e-12 69.3
Msa1085820 AT2G23980.3 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1085820 AT2G23980.2 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1085820 AT2G23980.8 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1085820 AT2G23980.7 22.439 205 156 2 241 442 404 608 6.23e-12 69.3
Msa1085820 AT5G53130.1 21.296 216 162 3 230 442 347 557 3.59e-11 67.0
Msa1085820 AT1G01340.1 23.039 204 152 3 243 442 337 539 7.05e-11 65.9
Msa1085820 AT1G01340.2 23.267 202 150 3 245 442 344 544 7.65e-11 65.9

Find 138 sgRNAs with CRISPR-Local

Find 483 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCGGCATATTTCTACATTT+TGG 0.153780 7_2:+86843399 Msa1085820:CDS
CTTCCCAATCCACGTGTTTC+CGG 0.184950 7_2:-86841573 None:intergenic
GCCTTCCCATCTTCATTAAA+TGG 0.195859 7_2:-86844304 Msa1085830:intron
ATAACTCATCGTCCTCTCTT+AGG 0.208567 7_2:-86846895 Msa1085830:intron
AGATTGTAATTGTCTCTATT+TGG 0.212418 7_2:-86846937 Msa1085830:intron
CTTCTACTTCTCACTGTATA+AGG 0.266754 7_2:-86844229 Msa1085830:intron
CCCAACGAAAACATTGAAAA+TGG 0.273238 7_2:+86846476 Msa1085820:CDS
CTGTATGCAGAGAACAAGTT+TGG 0.290869 7_2:+86846815 Msa1085820:intron
CAGTTTATGAAGGGCCTAAA+AGG 0.301144 7_2:+86844633 Msa1085820:intron
ATTTGGTCCTTCAAACCTTC+TGG 0.317911 7_2:-86843060 None:intergenic
GACATTCTTTGTGGCTTACT+TGG 0.330293 7_2:+86840171 Msa1085820:CDS
TTCCCAATCCACGTGTTTCC+GGG 0.336300 7_2:-86841572 None:intergenic
GTACCTATATCTGCGATCAT+AGG 0.339717 7_2:-86839919 None:intergenic
TTAAGGTTACCTTCTTCATA+TGG 0.341526 7_2:-86845595 Msa1085830:intron
CACGACAGAGGGGAAGTCTT+TGG 0.343113 7_2:+86841117 Msa1085820:CDS
GGAAGCATGGTAGGAGAAAT+AGG 0.351752 7_2:+86844184 Msa1085820:CDS
AACAGAATTTCTGAGTGATT+TGG 0.351877 7_2:+86844683 Msa1085820:CDS
ATTTCTCCTACCATGCTTCC+AGG 0.352995 7_2:-86844181 Msa1085830:intron
CCGTACAATCCACAGGATTA+AGG 0.353518 7_2:-86845612 Msa1085830:intron
GGGCCTAAAAGGCGGGGTGC+TGG 0.361204 7_2:+86844644 Msa1085820:CDS
CATAATCCTGACATTCTTTG+TGG 0.363443 7_2:+86840162 Msa1085820:CDS
ACCTGATAGCAATCTTCTTA+TGG 0.365107 7_2:-86840222 None:intergenic
AAAAGATCTTCGACTGAATC+TGG 0.370035 7_2:-86846524 Msa1085830:intron
GCTTTCAGAGAGATGTCAAT+TGG 0.377539 7_2:+86840091 Msa1085820:CDS
GACGTTCAAGTGGCGAAATA+AGG 0.388506 7_2:+86839805 Msa1085820:CDS
ATACCGGCTCTAATTGCTTT+AGG 0.395979 7_2:-86843150 None:intergenic
GTGAAACCATTTAATGAAGA+TGG 0.396083 7_2:+86844298 Msa1085820:CDS
AAGAGGAAGCAAAATTCTTA+TGG 0.402959 7_2:+86846841 Msa1085820:CDS
CTTCTCACTGTATAAGGTTG+TGG 0.405620 7_2:-86844223 Msa1085830:intron
TTTGGTCCTTCAAACCTTCT+GGG 0.406751 7_2:-86843059 None:intergenic
GGCCTCACTGCATATATTAT+CGG 0.406985 7_2:+86841752 Msa1085820:CDS
TTTAAAGAATGGGTCTGAAC+AGG 0.414172 7_2:+86843537 Msa1085820:CDS
AGTTGGTATATCTGCTGAAA+TGG 0.417497 7_2:-86841078 None:intergenic
CACCCGGAAACACGTGGATT+GGG 0.429696 7_2:+86841570 Msa1085820:CDS
AGGTCGAAGTAACCTTCATC+AGG 0.430867 7_2:-86839876 None:intergenic
TCACCCGGAAACACGTGGAT+TGG 0.431953 7_2:+86841569 Msa1085820:CDS
TAACTCATCGTCCTCTCTTA+GGG 0.435806 7_2:-86846894 Msa1085830:intron
AAACACGTGGATTGGGAAGC+AGG 0.440143 7_2:+86841577 Msa1085820:CDS
CTCCCTATGATCGCAGATAT+AGG 0.444080 7_2:+86839916 Msa1085820:CDS
GCTGTGTATGTGCCAACATT+TGG 0.448804 7_2:-86843077 None:intergenic
TTATTCTACTCAGTTTATGA+AGG 0.454225 7_2:+86844623 Msa1085820:intron
TATCGGAAACATGACAAATC+TGG 0.454837 7_2:+86841769 Msa1085820:CDS
GATGATCGATTCGTATAAGC+TGG 0.455732 7_2:-86844258 Msa1085830:intron
ACCATAAGAAGATTGCTATC+AGG 0.463306 7_2:+86840221 Msa1085820:CDS
CTCCATAGCCAACAGTGGTA+AGG 0.464281 7_2:-86841667 None:intergenic
GAAAAGATGCTGAGCAATAC+CGG 0.467875 7_2:-86843166 None:intergenic
TTATGAAGGGCCTAAAAGGC+GGG 0.476754 7_2:+86844637 Msa1085820:CDS
TTCTGAACATGCTTAGACTC+TGG 0.476763 7_2:+86841142 Msa1085820:CDS
TACCTATATCTGCGATCATA+GGG 0.482588 7_2:-86839918 None:intergenic
TTCTCACTGTATAAGGTTGT+GGG 0.485398 7_2:-86844222 Msa1085830:intron
TTTGGCACTAATCCTGATGA+AGG 0.487192 7_2:+86839864 Msa1085820:CDS
CTATTTGCAGTGCATTTCAC+AGG 0.490090 7_2:+86841512 Msa1085820:CDS
CTTTCAGAGAGATGTCAATT+GGG 0.493184 7_2:+86840092 Msa1085820:CDS
TCATCATCATTTCAAGCAGC+TGG 0.493382 7_2:+86844276 Msa1085820:CDS
ATTGTAACCCTTACCACTGT+TGG 0.494420 7_2:+86841659 Msa1085820:CDS
ACCAAAATGTAGAAATATGC+CGG 0.496163 7_2:-86843400 None:intergenic
TGCTTAGACTCTGGCGATTG+AGG 0.497213 7_2:+86841151 Msa1085820:CDS
CGGCTCTAATTGCTTTAGGC+AGG 0.497294 7_2:-86843146 None:intergenic
ACCCTTACCACTGTTGGCTA+TGG 0.497731 7_2:+86841665 Msa1085820:CDS
AGTAAGCCACAAAGAATGTC+AGG 0.501626 7_2:-86840168 None:intergenic
AGCAAAATTCTTATGGCTGA+TGG 0.505553 7_2:+86846848 Msa1085820:CDS
GATTATGTCAAATGCAAAGA+AGG 0.505830 7_2:-86840146 None:intergenic
CAAACATTTATTCTTCCCCA+TGG 0.507553 7_2:+86841038 Msa1085820:CDS
AAGCATAGGAGTGTCGGATC+GGG 0.514286 7_2:+86841611 Msa1085820:CDS
ACAGGCTAGAGAAAGACATC+AGG 0.515409 7_2:+86841334 Msa1085820:intron
ACAGCAAGAAGAAGTGCTAC+AGG 0.515890 7_2:+86843122 Msa1085820:CDS
TGGACTCCCAGAAGGTTTGA+AGG 0.517610 7_2:+86843053 Msa1085820:CDS
CCTTAATCCTGTGGATTGTA+CGG 0.517898 7_2:+86845612 Msa1085820:CDS
AAATTTATTTAAAGGAGTCT+CGG 0.522060 7_2:+86843209 Msa1085820:CDS
TAAAAGACTGCTAGAAATTG+AGG 0.525967 7_2:-86839835 None:intergenic
CTAGATCCTGGAAGCATGGT+AGG 0.533447 7_2:+86844175 Msa1085820:CDS
GAAGAAAATCCATATGAAGA+AGG 0.533805 7_2:+86845586 Msa1085820:CDS
GCAAACGTTCCTAGTGGTAT+TGG 0.536240 7_2:+86840033 Msa1085820:CDS
TGAAACCATTTAATGAAGAT+GGG 0.540227 7_2:+86844299 Msa1085820:CDS
CAGATATACCAACTTATAGC+AGG 0.540823 7_2:+86841087 Msa1085820:CDS
CATCTTGCAAAATGAGATGC+CGG 0.542003 7_2:+86843381 Msa1085820:CDS
AAGATGATGTCAACCTTTGA+CGG 0.542979 7_2:-86843364 None:intergenic
GTGGATTGGGAAGCAGGTAG+AGG 0.543328 7_2:+86841583 Msa1085820:CDS
ACCATTTAATGAAGATGGGA+AGG 0.544586 7_2:+86844303 Msa1085820:CDS
TCCATAGCCAACAGTGGTAA+GGG 0.545277 7_2:-86841666 None:intergenic
AACGTTCCTAGTGGTATTGG+TGG 0.546659 7_2:+86840036 Msa1085820:CDS
GACTAGGCTTGACAGTGGAC+TGG 0.551907 7_2:-86846423 Msa1085830:intron
TATTCTACTCAGTTTATGAA+GGG 0.552678 7_2:+86844624 Msa1085820:intron
CTCAGAAATTCTGTTACATA+CGG 0.553507 7_2:-86844675 Msa1085830:intron
TGTTTCCGGGTGATTTGTGA+TGG 0.553957 7_2:-86841559 None:intergenic
CAGGCAAATCACACGACAGA+GGG 0.557635 7_2:+86841106 Msa1085820:CDS
TAAGCATAGGAGTGTCGGAT+CGG 0.559099 7_2:+86841610 Msa1085820:CDS
TCAGGATTAGTGCCAAATGC+TGG 0.561152 7_2:-86839858 None:intergenic
AGAGTGGAAGCTAGATCCAT+GGG 0.562419 7_2:-86841054 None:intergenic
TCTGGTAGGATAATGAGCTT+TGG 0.563514 7_2:-86846506 Msa1085830:intron
GCAGCATCCGACACAAAATG+AGG 0.564454 7_2:+86845534 Msa1085820:intron
TCTCTGAAAGCTAACTCGAA+TGG 0.564788 7_2:-86840079 None:intergenic
TATTGGTGGTGTACTCAGCA+TGG 0.565665 7_2:+86840050 Msa1085820:CDS
AAGTGGCGAAATAAGGAACT+TGG 0.565700 7_2:+86839812 Msa1085820:CDS
ACCACGAACCTGAGTAAAGT+TGG 0.575334 7_2:-86844335 Msa1085830:intron
GTTACACTTACTCCATGTAC+TGG 0.577805 7_2:+86841633 Msa1085820:CDS
AATTATCACCAACTTTACTC+AGG 0.579672 7_2:+86844327 Msa1085820:CDS
GAACGTCTTCTAACTAGAGA+TGG 0.581226 7_2:-86839789 None:intergenic
CAGAGTGGAAGCTAGATCCA+TGG 0.582011 7_2:-86841055 None:intergenic
AGATGATGTCAACCTTTGAC+GGG 0.585146 7_2:-86843363 None:intergenic
TCTTCTTATGGTCATCAACA+AGG 0.589359 7_2:-86840210 None:intergenic
CAAACTAGATCCTGGAAGCA+TGG 0.592017 7_2:+86844171 Msa1085820:CDS
ATTGGTGGTGTACTCAGCAT+GGG 0.592623 7_2:+86840051 Msa1085820:CDS
AGATCTATGCGCCCTAAGAG+AGG 0.595067 7_2:+86846883 Msa1085820:CDS
CTGCCTAAAGCAATTAGAGC+CGG 0.596573 7_2:+86843147 Msa1085820:CDS
GATCTTCGACTGAATCTGGT+AGG 0.597089 7_2:-86846520 Msa1085830:intron
ATGATCGATTCGTATAAGCT+GGG 0.597906 7_2:-86844257 Msa1085830:intron
GCTTTCCATCACAAATCACC+CGG 0.601397 7_2:+86841554 Msa1085820:CDS
CTCTGTCAGAACCTTTGCCA+TGG 0.604556 7_2:+86841802 Msa1085820:CDS
TTTCGTTGGGGTGATGTCCG+TGG 0.604677 7_2:-86846463 Msa1085830:intron
TTTATGAAGGGCCTAAAAGG+CGG 0.604730 7_2:+86844636 Msa1085820:CDS
TGCAGAAAATACAACGGAGA+AGG 0.604909 7_2:+86841697 Msa1085820:CDS
AGCAGAATACTACCCGTCAA+AGG 0.606939 7_2:+86843351 Msa1085820:CDS
AGGTTTGAAGGACCAAATGT+TGG 0.607435 7_2:+86843065 Msa1085820:CDS
GTGATTTGCCTGCTATAAGT+TGG 0.611642 7_2:-86841095 None:intergenic
TTACTGACCGTACAATCCAC+AGG 0.616689 7_2:-86845619 Msa1085830:intron
AACAAGATCAGCAATCAACA+TGG 0.622158 7_2:-86840116 None:intergenic
CTAGTTAGAAGACGTTCAAG+TGG 0.624136 7_2:+86839795 Msa1085820:CDS
GGTTACAATAGACCAGTACA+TGG 0.630208 7_2:-86841645 None:intergenic
AGAAGGTAACCTTAATCCTG+TGG 0.632695 7_2:+86845603 Msa1085820:CDS
CGGAAACATGACAAATCTGG+TGG 0.634913 7_2:+86841772 Msa1085820:CDS
GTGTTAGTGAGCTCTTCTCA+AGG 0.639360 7_2:+86841175 Msa1085820:CDS
TCTGAGTGATTTGGAAGACG+AGG 0.639686 7_2:+86844692 Msa1085820:CDS
CAGCATCCGACACAAAATGA+GGG 0.640928 7_2:+86845535 Msa1085820:intron
CCGATTAGAGTCAAAATCCA+CGG 0.641853 7_2:+86846446 Msa1085820:CDS
TATGAAGGGCCTAAAAGGCG+GGG 0.644259 7_2:+86844638 Msa1085820:CDS
ACAAATCACCCGGAAACACG+TGG 0.645837 7_2:+86841564 Msa1085820:CDS
AGTACACCACCAATACCACT+AGG 0.675337 7_2:-86840042 None:intergenic
CAGGCTAGAGAAAGACATCA+GGG 0.679388 7_2:+86841335 Msa1085820:intron
GCAGGCAAATCACACGACAG+AGG 0.680984 7_2:+86841105 Msa1085820:CDS
TAAATCTCCATAGCCAACAG+TGG 0.683311 7_2:-86841672 None:intergenic
TTTACATGCAGAAAATACAA+CGG 0.691098 7_2:+86841691 Msa1085820:CDS
TATCTGCTGAAATGGCAGAG+TGG 0.713852 7_2:-86841070 None:intergenic
ATTGTGGCAAACGTTCCTAG+TGG 0.719275 7_2:+86840027 Msa1085820:CDS
ATCGGGACTAGGCTTGACAG+TGG 0.726298 7_2:-86846428 Msa1085830:intron
AGGCAAATCACACGACAGAG+GGG 0.735317 7_2:+86841107 Msa1085820:CDS
TTCCGATAATATATGCAGTG+AGG 0.738037 7_2:-86841754 None:intergenic
GAGTGGAAGCTAGATCCATG+GGG 0.775567 7_2:-86841053 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAACTAATAATTGTATTA+AGG - chr7_2:86839961-86839980 None:intergenic 10.0%
!!! ATCAATAGTATTAAAATTTT+CGG - chr7_2:86840428-86840447 None:intergenic 10.0%
!! GAAAAAACAAATTTATTTAA+AGG + chr7_2:86843201-86843220 Msa1085820:CDS 10.0%
!!! AAACAGATTTATTTTAATTT+TGG + chr7_2:86845454-86845473 Msa1085820:intron 10.0%
!!! GAAAATTTTAATACTATTGA+TGG + chr7_2:86840427-86840446 Msa1085820:intron 15.0%
!! AAAAAAAAAAAAACTACCAA+GGG - chr7_2:86840476-86840495 None:intergenic 15.0%
!! AAAAAAAAAAAAAACTACCA+AGG - chr7_2:86840477-86840496 None:intergenic 15.0%
!!! AGTATATATTTCATAGTTTT+TGG - chr7_2:86840965-86840984 None:intergenic 15.0%
!! AAACTTAAATTCATTTCTTT+AGG + chr7_2:86841215-86841234 Msa1085820:intron 15.0%
!!! AATTTTTTGAAGATTTTTCA+TGG + chr7_2:86841827-86841846 Msa1085820:intron 15.0%
!!! CGTTTTTAATATAAGAAATA+AGG - chr7_2:86842351-86842370 None:intergenic 15.0%
!! GCATATAATTATAAGTATTT+CGG - chr7_2:86842985-86843004 None:intergenic 15.0%
!!! ATATTGTAATATTTTGTTGA+AGG - chr7_2:86843022-86843041 None:intergenic 15.0%
!! TTATTATAATTTCTGAACTA+TGG + chr7_2:86843769-86843788 Msa1085820:intron 15.0%
!! AAATACTTTGTATAAAACAT+TGG - chr7_2:86844082-86844101 Msa1085830:intron 15.0%
!! AACATTAATATAGAAAGATA+TGG - chr7_2:86844594-86844613 Msa1085830:intron 15.0%
!! AATAGAATATATAAGTATCA+TGG + chr7_2:86845212-86845231 Msa1085820:intron 15.0%
!!! AAAAAATTAAAGACGTTTTA+CGG + chr7_2:86845388-86845407 Msa1085820:intron 15.0%
!! TTAAACAAAAAGTTATTAAG+TGG - chr7_2:86845877-86845896 Msa1085830:intron 15.0%
!!! TTTTTGTGCATTTATATATT+AGG - chr7_2:86846377-86846396 Msa1085830:intron 15.0%
!! ATTAAAATGAAATCAAAGAA+GGG - chr7_2:86846702-86846721 Msa1085830:intron 15.0%
!! AATTAAAATGAAATCAAAGA+AGG - chr7_2:86846703-86846722 Msa1085830:intron 15.0%
!!! GAGCAATAACATATTTTTTT+AGG - chr7_2:86839899-86839918 None:intergenic 20.0%
!! TTATCTATACCAATATACAA+AGG + chr7_2:86840528-86840547 Msa1085820:intron 20.0%
!! TATCTATACCAATATACAAA+GGG + chr7_2:86840529-86840548 Msa1085820:intron 20.0%
!!! TACTTTCAGTTTTGTTTAAT+TGG + chr7_2:86840910-86840929 Msa1085820:intron 20.0%
!!! GATTATTGAGTTTTCATAAT+AGG + chr7_2:86841010-86841029 Msa1085820:intron 20.0%
!!! ATTTCTTTAGGATATTTTTG+TGG + chr7_2:86841227-86841246 Msa1085820:intron 20.0%
!!! TTTCTTTAGGATATTTTTGT+GGG + chr7_2:86841228-86841247 Msa1085820:intron 20.0%
!!! ATTTGATGGTATATCTTATT+TGG - chr7_2:86841434-86841453 None:intergenic 20.0%
!!! TTTTATATGCTGTTTAACAT+CGG + chr7_2:86841731-86841750 Msa1085820:CDS 20.0%
!! AATCTTCAAAAAATTTACCA+TGG - chr7_2:86841822-86841841 None:intergenic 20.0%
!! AAATCTAATCTACTTTAATC+TGG + chr7_2:86842057-86842076 Msa1085820:intron 20.0%
!! AAAAACTTAAAGTTAGGAAA+TGG - chr7_2:86842253-86842272 None:intergenic 20.0%
!! TAGCATAAAAACTTAAAGTT+AGG - chr7_2:86842259-86842278 None:intergenic 20.0%
!! AAAGTTATGAAAGAATTTCA+CGG - chr7_2:86842506-86842525 None:intergenic 20.0%
!! TTTGAGTAAAAAGAAAACTT+AGG - chr7_2:86842545-86842564 None:intergenic 20.0%
!! AATAACTTCGATATTTCAAT+TGG - chr7_2:86842616-86842635 None:intergenic 20.0%
!! TAGGGAAATAAAAATGTAAA+GGG + chr7_2:86842818-86842837 Msa1085820:intron 20.0%
!! AAATTAAGCAAATCTACTAT+TGG - chr7_2:86842868-86842887 None:intergenic 20.0%
!! AAATTTATTTAAAGGAGTCT+CGG + chr7_2:86843209-86843228 Msa1085820:CDS 20.0%
!!! ATGTGTTGATTTTAAAGAAT+GGG + chr7_2:86843527-86843546 Msa1085820:CDS 20.0%
!! CTTGTATATTTAGAAATTTC+AGG - chr7_2:86844478-86844497 Msa1085830:intron 20.0%
!! CTGAAATTTCTAAATATACA+AGG + chr7_2:86844476-86844495 Msa1085820:intron 20.0%
!!! TATTGGTGATTGAAATTTAA+AGG - chr7_2:86844728-86844747 Msa1085830:intron 20.0%
!! ATTGTATATAAGTTTGTCTA+AGG - chr7_2:86844900-86844919 Msa1085830:intron 20.0%
!! AATACATATATTAACATCTC+AGG + chr7_2:86845181-86845200 Msa1085820:intron 20.0%
!! ATACATATATTAACATCTCA+GGG + chr7_2:86845182-86845201 Msa1085820:intron 20.0%
!! AATCATGTGATATTACTAAA+TGG + chr7_2:86845923-86845942 Msa1085820:intron 20.0%
!! ATTTATATATTAGGTAAGCA+GGG - chr7_2:86846368-86846387 Msa1085830:intron 20.0%
!!! GTATTGAACATATTAATTTG+TGG + chr7_2:86846789-86846808 Msa1085820:intron 20.0%
! CAAGTTTATGATATAGATTG+TGG + chr7_2:86840011-86840030 Msa1085820:intron 25.0%
! ATCTATACCAATATACAAAG+GGG + chr7_2:86840530-86840549 Msa1085820:intron 25.0%
! GTACAAAATATTGAAGTGAA+GGG - chr7_2:86840699-86840718 None:intergenic 25.0%
! TTTAATCAAGTATTCGTTGT+TGG + chr7_2:86840786-86840805 Msa1085820:intron 25.0%
!! AGTTTGTATGTCTTCATTTT+TGG + chr7_2:86840810-86840829 Msa1085820:intron 25.0%
!!! TATTTGGTGTCAAGATAAAA+GGG - chr7_2:86840855-86840874 None:intergenic 25.0%
! ACAAAACTGAAAGTAAATCT+AGG - chr7_2:86840905-86840924 None:intergenic 25.0%
! CAATAATCATGAGAAAATAG+AGG - chr7_2:86840998-86841017 None:intergenic 25.0%
! ACCATCAAATTGTCTAATTT+AGG + chr7_2:86841444-86841463 Msa1085820:intron 25.0%
! ACCTAAATTAGACAATTTGA+TGG - chr7_2:86841448-86841467 None:intergenic 25.0%
! TTTACATGCAGAAAATACAA+CGG + chr7_2:86841691-86841710 Msa1085820:CDS 25.0%
!!! ATTTTTGAGATACTTACAGT+GGG - chr7_2:86842007-86842026 None:intergenic 25.0%
!!! TATTTTTGAGATACTTACAG+TGG - chr7_2:86842008-86842027 None:intergenic 25.0%
!!! TAGTTTGTTAGTTTGTTTTC+CGG - chr7_2:86842106-86842125 None:intergenic 25.0%
!! TTCTAGTATATTTGTTGCAA+TGG - chr7_2:86842131-86842150 None:intergenic 25.0%
! ATACTACAAAGGAGTAAAAA+AGG + chr7_2:86842177-86842196 Msa1085820:intron 25.0%
! TACTACAAAGGAGTAAAAAA+GGG + chr7_2:86842178-86842197 Msa1085820:intron 25.0%
! TTCTTATATTAAAAACGCCA+AGG + chr7_2:86842354-86842373 Msa1085820:intron 25.0%
!! TTTCAATTGGTGAATTTTGA+GGG - chr7_2:86842603-86842622 None:intergenic 25.0%
!! ATTTCAATTGGTGAATTTTG+AGG - chr7_2:86842604-86842623 None:intergenic 25.0%
! GTAGGGAAATAAAAATGTAA+AGG + chr7_2:86842817-86842836 Msa1085820:intron 25.0%
!! AAAAATGTAAAGGGTTTTTC+AGG + chr7_2:86842827-86842846 Msa1085820:intron 25.0%
! TATAATTATATGCTTCACAG+AGG + chr7_2:86842992-86843011 Msa1085820:intron 25.0%
! ATAATTATATGCTTCACAGA+GGG + chr7_2:86842993-86843012 Msa1085820:intron 25.0%
!! AAAAAGAAGTTTTACCATCT+GGG - chr7_2:86843247-86843266 None:intergenic 25.0%
!! AAAAAAGAAGTTTTACCATC+TGG - chr7_2:86843248-86843267 None:intergenic 25.0%
!!! TATTTCTACATTTTGGTATC+TGG + chr7_2:86843406-86843425 Msa1085820:CDS 25.0%
!!! GATGTGTTGATTTTAAAGAA+TGG + chr7_2:86843526-86843545 Msa1085820:CDS 25.0%
!!! AATATGTTTTGAAGTTATGC+AGG - chr7_2:86843817-86843836 Msa1085830:three_prime_UTR 25.0%
! ATCTTAATCAGACAAGTAAA+TGG + chr7_2:86843981-86844000 Msa1085820:intron 25.0%
! TGAAACCATTTAATGAAGAT+GGG + chr7_2:86844299-86844318 Msa1085820:CDS 25.0%
! AGAAATTTCAGGAAAAATGT+GGG - chr7_2:86844467-86844486 Msa1085830:intron 25.0%
! TAGAAATTTCAGGAAAAATG+TGG - chr7_2:86844468-86844487 Msa1085830:intron 25.0%
! TTATTCTACTCAGTTTATGA+AGG + chr7_2:86844623-86844642 Msa1085820:intron 25.0%
! TATTCTACTCAGTTTATGAA+GGG + chr7_2:86844624-86844643 Msa1085820:intron 25.0%
! GTGATTGAAATTTAAAGGAA+AGG - chr7_2:86844723-86844742 Msa1085830:intron 25.0%
!!! ACAAAAATTTTAGTAAGGCT+CGG + chr7_2:86844800-86844819 Msa1085820:intron 25.0%
! AAAAGATGCTAAAAAATCCA+TGG + chr7_2:86844845-86844864 Msa1085820:intron 25.0%
!! TTATTCTTTTATCCTTCACT+TGG - chr7_2:86845036-86845055 Msa1085830:intron 25.0%
!!! TAAAGTCTTTATTTTCTGGA+GGG - chr7_2:86845424-86845443 Msa1085830:intron 25.0%
!!! ATAAAGTCTTTATTTTCTGG+AGG - chr7_2:86845425-86845444 Msa1085830:intron 25.0%
! TCCAGAAAATAAAGACTTTA+TGG + chr7_2:86845424-86845443 Msa1085820:intron 25.0%
! ATTTATGAGCATGATTATGA+GGG + chr7_2:86845742-86845761 Msa1085820:intron 25.0%
!! TAAAAGTTGTTGTAAGTTGA+CGG - chr7_2:86845835-86845854 Msa1085830:intron 25.0%
! ATGACAGTAATATATTGCTA+TGG + chr7_2:86846200-86846219 Msa1085820:intron 25.0%
! AAACTGAAGAAAAAAAACCT+AGG - chr7_2:86846234-86846253 Msa1085830:intron 25.0%
! CATTTATATATTAGGTAAGC+AGG - chr7_2:86846369-86846388 Msa1085830:intron 25.0%
! TAATCCAAAGATAGAAATAG+AGG + chr7_2:86846654-86846673 Msa1085820:intron 25.0%
! AATCCAAAGATAGAAATAGA+GGG + chr7_2:86846655-86846674 Msa1085820:intron 25.0%
!!! TTTTTATTATGAAGCACTGT+GGG - chr7_2:86846729-86846748 Msa1085830:intron 25.0%
!!! ATTTTTATTATGAAGCACTG+TGG - chr7_2:86846730-86846749 Msa1085830:intron 25.0%
! AGATTGTAATTGTCTCTATT+TGG - chr7_2:86846940-86846959 Msa1085830:intron 25.0%
TAAAAGACTGCTAGAAATTG+AGG - chr7_2:86839838-86839857 None:intergenic 30.0%
GATTATGTCAAATGCAAAGA+AGG - chr7_2:86840149-86840168 None:intergenic 30.0%
! TTTTGACAAAATGTTACCCT+TGG + chr7_2:86840499-86840518 Msa1085820:intron 30.0%
GTATAGATAACAACTACCAA+GGG - chr7_2:86840518-86840537 None:intergenic 30.0%
!!! ACTTTTGGGTTGGATTTTTT+CGG + chr7_2:86840562-86840581 Msa1085820:intron 30.0%
CAATATTGCTTCTATTGTTG+TGG - chr7_2:86840597-86840616 None:intergenic 30.0%
CACAACAATAGAAGCAATAT+TGG + chr7_2:86840595-86840614 Msa1085820:intron 30.0%
GGTACAAAATATTGAAGTGA+AGG - chr7_2:86840700-86840719 None:intergenic 30.0%
! TTGTACCATTTTATCGTTCA+TGG + chr7_2:86840713-86840732 Msa1085820:intron 30.0%
ATTGTCCATGAACGATAAAA+TGG - chr7_2:86840721-86840740 None:intergenic 30.0%
TCGTTCATGGACAATAAAAA+TGG + chr7_2:86840726-86840745 Msa1085820:intron 30.0%
!! ATTTGGTGTCAAGATAAAAG+GGG - chr7_2:86840854-86840873 None:intergenic 30.0%
!! CTATTTGGTGTCAAGATAAA+AGG - chr7_2:86840856-86840875 None:intergenic 30.0%
AAGACAGTGAAGTAACTATT+TGG - chr7_2:86840871-86840890 None:intergenic 30.0%
TTGTTTAATTGGACAAGCAA+TGG + chr7_2:86840921-86840940 Msa1085820:intron 30.0%
GTTTAGGTACAAGTTACAAA+TGG - chr7_2:86841300-86841319 None:intergenic 30.0%
!! ATTTTGAGCTTCACTTTTGT+TGG + chr7_2:86841473-86841492 Msa1085820:intron 30.0%
!!! CACTTTTGTTGGTTTATCAT+AGG + chr7_2:86841484-86841503 Msa1085820:intron 30.0%
CAAAAAATTTACCATGGCAA+AGG - chr7_2:86841816-86841835 None:intergenic 30.0%
!!! ATAGTTTTATGTCTTCCTAG+TGG + chr7_2:86841898-86841917 Msa1085820:intron 30.0%
TAAAGGAAGAAAACACAGTA+AGG + chr7_2:86841925-86841944 Msa1085820:intron 30.0%
CTAATCTACTTTAATCTGGT+TGG + chr7_2:86842061-86842080 Msa1085820:intron 30.0%
!! TACTTTAATCTGGTTGGTAA+GGG + chr7_2:86842067-86842086 Msa1085820:intron 30.0%
CTAGAAACTTAAGACTTGAT+TGG + chr7_2:86842145-86842164 Msa1085820:intron 30.0%
GGTTATAAGTGATACTACAA+AGG + chr7_2:86842166-86842185 Msa1085820:intron 30.0%
ACTACAAAGGAGTAAAAAAG+GGG + chr7_2:86842179-86842198 Msa1085820:intron 30.0%
TGAAAGTTGACTAGGATATA+GGG - chr7_2:86842393-86842412 None:intergenic 30.0%
CTGCATTCAAATCTCTATTA+TGG + chr7_2:86842419-86842438 Msa1085820:intron 30.0%
TTTGAAGAGAGAATTCTGTT+GGG - chr7_2:86842652-86842671 None:intergenic 30.0%
TACTCTATTAACATATTCGG+AGG - chr7_2:86842800-86842819 None:intergenic 30.0%
TCCGAATATGTTAATAGAGT+AGG + chr7_2:86842799-86842818 Msa1085820:intron 30.0%
CCCTACTCTATTAACATATT+CGG - chr7_2:86842803-86842822 None:intergenic 30.0%
CCGAATATGTTAATAGAGTA+GGG + chr7_2:86842800-86842819 Msa1085820:intron 30.0%
TTACAATATGCGAGCAAAAA+TGG + chr7_2:86843033-86843052 Msa1085820:CDS 30.0%
!!! TTGTTTTTTCAACTACGTTG+TGG - chr7_2:86843191-86843210 None:intergenic 30.0%
ACCAAAATGTAGAAATATGC+CGG - chr7_2:86843403-86843422 None:intergenic 30.0%
! TCTGAAATCAATTGTCTGTT+TGG - chr7_2:86843574-86843593 Msa1085830:three_prime_UTR 30.0%
TTAGTATCTGTTGTCTAAGT+GGG - chr7_2:86843710-86843729 Msa1085830:three_prime_UTR 30.0%
TTTAGTATCTGTTGTCTAAG+TGG - chr7_2:86843711-86843730 Msa1085830:three_prime_UTR 30.0%
AATTTCTGAACTATGGAGAT+CGG + chr7_2:86843776-86843795 Msa1085820:intron 30.0%
! TTTTTGTTCAAACTAGATCC+TGG + chr7_2:86844163-86844182 Msa1085820:CDS 30.0%
GTGAAACCATTTAATGAAGA+TGG + chr7_2:86844298-86844317 Msa1085820:CDS 30.0%
AATTATCACCAACTTTACTC+AGG + chr7_2:86844327-86844346 Msa1085820:CDS 30.0%
CAAATGTGTATTTGTGTTTG+TGG - chr7_2:86844387-86844406 Msa1085830:intron 30.0%
GAAATTTCAGGAAAAATGTG+GGG - chr7_2:86844466-86844485 Msa1085830:intron 30.0%
!!! TCATATTTTTGAGGTCTTTG+TGG - chr7_2:86844535-86844554 Msa1085830:intron 30.0%
!! GGAATTTGGTCATATTTTTG+AGG - chr7_2:86844544-86844563 Msa1085830:intron 30.0%
AAGTTTGTATGAAGGGAATT+TGG - chr7_2:86844558-86844577 Msa1085830:intron 30.0%
TATAGAAAGATATGGACTTG+TGG - chr7_2:86844586-86844605 Msa1085830:intron 30.0%
CTCAGAAATTCTGTTACATA+CGG - chr7_2:86844678-86844697 Msa1085830:intron 30.0%
AACAGAATTTCTGAGTGATT+TGG + chr7_2:86844683-86844702 Msa1085820:CDS 30.0%
!!! TTTTTTGCCAAGAAGAGTAT+TGG - chr7_2:86844745-86844764 Msa1085830:intron 30.0%
!! GGAGCACAAAAATTTTAGTA+AGG + chr7_2:86844795-86844814 Msa1085820:intron 30.0%
TATGCGATGTTTAATATCCA+TGG - chr7_2:86844865-86844884 Msa1085830:intron 30.0%
! TTTGTCTAAGGTTTAGCTAT+GGG - chr7_2:86844888-86844907 Msa1085830:intron 30.0%
ACAATTAGTACTTTAGTGTG+TGG + chr7_2:86844915-86844934 Msa1085820:intron 30.0%
CAATTAGTACTTTAGTGTGT+GGG + chr7_2:86844916-86844935 Msa1085820:intron 30.0%
! CAGGAATAACTTTTTACTTC+TGG - chr7_2:86844955-86844974 Msa1085830:intron 30.0%
! AAAACATGGTTTAAAGCTGA+TGG - chr7_2:86845001-86845020 Msa1085830:intron 30.0%
!!! TTAAACCATGTTTTGAGGAA+AGG + chr7_2:86845007-86845026 Msa1085820:intron 30.0%
!!! TAAACCATGTTTTGAGGAAA+GGG + chr7_2:86845008-86845027 Msa1085820:intron 30.0%
TAACAATGTGTGTGTATACA+TGG + chr7_2:86845262-86845281 Msa1085820:intron 30.0%
!!! GCGTAACATTTTTTTCTTTC+TGG - chr7_2:86845361-86845380 Msa1085830:intron 30.0%
! AAATTAAAGACGTTTTACGG+TGG + chr7_2:86845391-86845410 Msa1085820:intron 30.0%
!!! GCCATAAAGTCTTTATTTTC+TGG - chr7_2:86845428-86845447 Msa1085830:intron 30.0%
AAATAAAGACTTTATGGCAC+AGG + chr7_2:86845430-86845449 Msa1085820:intron 30.0%
TTTGTACAGATGTAAATGTG+TGG - chr7_2:86845480-86845499 Msa1085830:intron 30.0%
! CTTCATATGGATTTTCTTCA+TGG - chr7_2:86845585-86845604 Msa1085830:intron 30.0%
GAAGAAAATCCATATGAAGA+AGG + chr7_2:86845586-86845605 Msa1085820:CDS 30.0%
TTAAGGTTACCTTCTTCATA+TGG - chr7_2:86845598-86845617 Msa1085830:intron 30.0%
GATGATAACACTAAATGAGT+GGG + chr7_2:86845644-86845663 Msa1085820:intron 30.0%
TCATGCTCATAAATCTTTCT+GGG - chr7_2:86845736-86845755 Msa1085830:intron 30.0%
ATCATGCTCATAAATCTTTC+TGG - chr7_2:86845737-86845756 Msa1085830:intron 30.0%
GATTTATGAGCATGATTATG+AGG + chr7_2:86845741-86845760 Msa1085820:intron 30.0%
! AATTTGAGATTGCCATTCAA+AGG + chr7_2:86845793-86845812 Msa1085820:intron 30.0%
GGATATAATCAAATGGTACT+AGG - chr7_2:86845970-86845989 Msa1085830:intron 30.0%
TTGGTAGGGATATAATCAAA+TGG - chr7_2:86845977-86845996 Msa1085830:intron 30.0%
TTAACACTAACACTTACACT+TGG - chr7_2:86845996-86846015 Msa1085830:intron 30.0%
AGTAATATATTGCTATGGCA+AGG + chr7_2:86846205-86846224 Msa1085820:intron 30.0%
ATGCACAAAAAAATTAACGC+AGG + chr7_2:86846386-86846405 Msa1085820:intron 30.0%
! CATTTTCAATGTTTTCGTTG+GGG - chr7_2:86846478-86846497 Msa1085830:intron 30.0%
! CCATTTTCAATGTTTTCGTT+GGG - chr7_2:86846479-86846498 Msa1085830:intron 30.0%
! TCCATTTTCAATGTTTTCGT+TGG - chr7_2:86846480-86846499 Msa1085830:intron 30.0%
! GAAACTACTCAGAATCTTTT+GGG - chr7_2:86846601-86846620 Msa1085830:intron 30.0%
! TGAAACTACTCAGAATCTTT+TGG - chr7_2:86846602-86846621 Msa1085830:intron 30.0%
AAAGATTCTGAGTAGTTTCA+CGG + chr7_2:86846602-86846621 Msa1085820:intron 30.0%
ATCCAAAGATAGAAATAGAG+GGG + chr7_2:86846656-86846675 Msa1085820:intron 30.0%
AAGAGGAAGCAAAATTCTTA+TGG + chr7_2:86846841-86846860 Msa1085820:CDS 30.0%
TACCTATATCTGCGATCATA+GGG - chr7_2:86839921-86839940 None:intergenic 35.0%
CTTTCAGAGAGATGTCAATT+GGG + chr7_2:86840092-86840111 Msa1085820:CDS 35.0%
AACAAGATCAGCAATCAACA+TGG - chr7_2:86840119-86840138 None:intergenic 35.0%
CATAATCCTGACATTCTTTG+TGG + chr7_2:86840162-86840181 Msa1085820:CDS 35.0%
TCTTCTTATGGTCATCAACA+AGG - chr7_2:86840213-86840232 None:intergenic 35.0%
ACCATAAGAAGATTGCTATC+AGG + chr7_2:86840221-86840240 Msa1085820:CDS 35.0%
ACCTGATAGCAATCTTCTTA+TGG - chr7_2:86840225-86840244 None:intergenic 35.0%
CCATACTTTCTACATCAACA+CGG + chr7_2:86840254-86840273 Msa1085820:intron 35.0%
TTAGTCTCAACGATTCCAAA+GGG - chr7_2:86840370-86840389 None:intergenic 35.0%
! ATTAGTCTCAACGATTCCAA+AGG - chr7_2:86840371-86840390 None:intergenic 35.0%
! GTTGAGACTAATCATTGACT+CGG + chr7_2:86840379-86840398 Msa1085820:intron 35.0%
GGTATAGATAACAACTACCA+AGG - chr7_2:86840519-86840538 None:intergenic 35.0%
GATGAATCCCCTTTGTATAT+TGG - chr7_2:86840540-86840559 None:intergenic 35.0%
! AAGGGGATTCATCAAACTTT+TGG + chr7_2:86840547-86840566 Msa1085820:intron 35.0%
! AGGGGATTCATCAAACTTTT+GGG + chr7_2:86840548-86840567 Msa1085820:intron 35.0%
!! GATTCATCAAACTTTTGGGT+TGG + chr7_2:86840552-86840571 Msa1085820:intron 35.0%
!! TTTGGTGTCAAGATAAAAGG+GGG - chr7_2:86840853-86840872 None:intergenic 35.0%
CAAACATTTATTCTTCCCCA+TGG + chr7_2:86841038-86841057 Msa1085820:CDS 35.0%
! AGTTGGTATATCTGCTGAAA+TGG - chr7_2:86841081-86841100 None:intergenic 35.0%
CAGATATACCAACTTATAGC+AGG + chr7_2:86841087-86841106 Msa1085820:CDS 35.0%
! AGGTAGAGGATTTTAAGCAT+AGG + chr7_2:86841597-86841616 Msa1085820:CDS 35.0%
!! GATTTTAAGCATAGGAGTGT+CGG + chr7_2:86841605-86841624 Msa1085820:CDS 35.0%
TTCCGATAATATATGCAGTG+AGG - chr7_2:86841757-86841776 None:intergenic 35.0%
TATCGGAAACATGACAAATC+TGG + chr7_2:86841769-86841788 Msa1085820:CDS 35.0%
AGAATGCAATGCTAAGTCAA+GGG - chr7_2:86841861-86841880 None:intergenic 35.0%
TAGAATGCAATGCTAAGTCA+AGG - chr7_2:86841862-86841881 None:intergenic 35.0%
! TTCTTCCTTTAACTTCCACT+AGG - chr7_2:86841916-86841935 None:intergenic 35.0%
! CTACTTTAATCTGGTTGGTA+AGG + chr7_2:86842066-86842085 Msa1085820:intron 35.0%
TAAGGGAACGAATTAACATC+CGG + chr7_2:86842084-86842103 Msa1085820:intron 35.0%
ATATAGTATTTACCACCTCC+AGG + chr7_2:86842225-86842244 Msa1085820:intron 35.0%
TGCTATTAAGTTTGTCAAGC+AGG + chr7_2:86842274-86842293 Msa1085820:intron 35.0%
GCTATTAAGTTTGTCAAGCA+GGG + chr7_2:86842275-86842294 Msa1085820:intron 35.0%
CTGAAAGTTGACTAGGATAT+AGG - chr7_2:86842394-86842413 None:intergenic 35.0%
AGTTAAGCTGAAAGTTGACT+AGG - chr7_2:86842401-86842420 None:intergenic 35.0%
TTGAAGAGAGAATTCTGTTG+GGG - chr7_2:86842651-86842670 None:intergenic 35.0%
GTTTGAAGAGAGAATTCTGT+TGG - chr7_2:86842653-86842672 None:intergenic 35.0%
! GGATGATTTTATATCCCAGA+TGG + chr7_2:86843230-86843249 Msa1085820:CDS 35.0%
AAGATGATGTCAACCTTTGA+CGG - chr7_2:86843367-86843386 None:intergenic 35.0%
TACAGTTCATACTCTAGTAC+TGG + chr7_2:86843461-86843480 Msa1085820:intron 35.0%
TTTAAAGAATGGGTCTGAAC+AGG + chr7_2:86843537-86843556 Msa1085820:CDS 35.0%
AAACATATTGCATCAACCTG+AGG + chr7_2:86843828-86843847 Msa1085820:intron 35.0%
GTCTGATTAAGATGTTCTCT+AGG - chr7_2:86843974-86843993 Msa1085830:intron 35.0%
AGACAAGTAAATGGAACAGA+AGG + chr7_2:86843990-86844009 Msa1085820:intron 35.0%
! ACTAGGAACAAGACATTTTG+AGG + chr7_2:86844034-86844053 Msa1085820:intron 35.0%
! CTAGGAACAAGACATTTTGA+GGG + chr7_2:86844035-86844054 Msa1085820:intron 35.0%
TATTTGTGCCTCTTAGCTAA+TGG + chr7_2:86844097-86844116 Msa1085820:intron 35.0%
TATGAGCTTAGCAATGCAAT+GGG - chr7_2:86844130-86844149 Msa1085830:intron 35.0%
TTATGAGCTTAGCAATGCAA+TGG - chr7_2:86844131-86844150 Msa1085830:intron 35.0%
TTCTCACTGTATAAGGTTGT+GGG - chr7_2:86844225-86844244 Msa1085830:intron 35.0%
CTTCTACTTCTCACTGTATA+AGG - chr7_2:86844232-86844251 Msa1085830:intron 35.0%
!! ATGATCGATTCGTATAAGCT+GGG - chr7_2:86844260-86844279 Msa1085830:intron 35.0%
ACCATTTAATGAAGATGGGA+AGG + chr7_2:86844303-86844322 Msa1085820:CDS 35.0%
GGACATGAAGTTTGTATGAA+GGG - chr7_2:86844565-86844584 Msa1085830:intron 35.0%
TGGACATGAAGTTTGTATGA+AGG - chr7_2:86844566-86844585 Msa1085830:intron 35.0%
TCAATCACCAATACTCTTCT+TGG + chr7_2:86844735-86844754 Msa1085820:intron 35.0%
! GTTTGTCTAAGGTTTAGCTA+TGG - chr7_2:86844889-86844908 Msa1085830:intron 35.0%
!!! CCAAGATCTTTTGGAATTTC+AGG - chr7_2:86844974-86844993 Msa1085830:intron 35.0%
CCTGAAATTCCAAAAGATCT+TGG + chr7_2:86844971-86844990 Msa1085820:intron 35.0%
! GATGGATAACCAAGATCTTT+TGG - chr7_2:86844983-86845002 Msa1085830:intron 35.0%
!!! CAGCTTTAAACCATGTTTTG+AGG + chr7_2:86845002-86845021 Msa1085820:intron 35.0%
!!! AAACCATGTTTTGAGGAAAG+GGG + chr7_2:86845009-86845028 Msa1085820:intron 35.0%
ATTCTTTCGTTCAAAGGAAG+TGG - chr7_2:86845154-86845173 Msa1085830:intron 35.0%
TTCACGATTCTTTCGTTCAA+AGG - chr7_2:86845160-86845179 Msa1085830:intron 35.0%
ATGTAAACCATTGCGAGAAT+TGG - chr7_2:86845239-86845258 Msa1085830:intron 35.0%
GGATGATAACACTAAATGAG+TGG + chr7_2:86845643-86845662 Msa1085820:intron 35.0%
AAGAACCAGTTGACATTCAA+GGG + chr7_2:86845693-86845712 Msa1085820:intron 35.0%
ACATGATTACACGATCAGAT+TGG - chr7_2:86845911-86845930 Msa1085830:intron 35.0%
ACTAACACTTACACTTGGTA+GGG - chr7_2:86845991-86846010 Msa1085830:intron 35.0%
AAGATATGTCATATGTCACG+TGG + chr7_2:86846015-86846034 Msa1085820:intron 35.0%
AGATATGTCATATGTCACGT+GGG + chr7_2:86846016-86846035 Msa1085820:intron 35.0%
!!! GCTGCTTTTTTGAATAAACC+AGG - chr7_2:86846088-86846107 Msa1085830:intron 35.0%
AACTAAGATTGCAATCAAGC+TGG - chr7_2:86846161-86846180 Msa1085830:intron 35.0%
! TTACTGTCATCTAGAGTTTG+AGG - chr7_2:86846190-86846209 Msa1085830:intron 35.0%
! CATATCAAGTTGTGACACTA+CGG - chr7_2:86846267-86846286 Msa1085830:intron 35.0%
AGGGAAATATTAGGTAAGCA+GGG - chr7_2:86846349-86846368 Msa1085830:intron 35.0%
TAGGTAAGCAGGGAAATATT+AGG - chr7_2:86846358-86846377 Msa1085830:intron 35.0%
CCCAACGAAAACATTGAAAA+TGG + chr7_2:86846476-86846495 Msa1085820:CDS 35.0%
AAAAGATCTTCGACTGAATC+TGG - chr7_2:86846527-86846546 Msa1085830:intron 35.0%
TCCAAAGATAGAAATAGAGG+GGG + chr7_2:86846657-86846676 Msa1085820:intron 35.0%
GAGAACAAGTTTGGAAAAAG+AGG + chr7_2:86846824-86846843 Msa1085820:intron 35.0%
AGCAAAATTCTTATGGCTGA+TGG + chr7_2:86846848-86846867 Msa1085820:CDS 35.0%
GAACGTCTTCTAACTAGAGA+TGG - chr7_2:86839792-86839811 None:intergenic 40.0%
CTAGTTAGAAGACGTTCAAG+TGG + chr7_2:86839795-86839814 Msa1085820:CDS 40.0%
AAGTGGCGAAATAAGGAACT+TGG + chr7_2:86839812-86839831 Msa1085820:CDS 40.0%
! AGCAGTCTTTTACCAGCATT+TGG + chr7_2:86839846-86839865 Msa1085820:CDS 40.0%
TTTGGCACTAATCCTGATGA+AGG + chr7_2:86839864-86839883 Msa1085820:CDS 40.0%
GTACCTATATCTGCGATCAT+AGG - chr7_2:86839922-86839941 None:intergenic 40.0%
! TCTCTGAAAGCTAACTCGAA+TGG - chr7_2:86840082-86840101 None:intergenic 40.0%
GCTTTCAGAGAGATGTCAAT+TGG + chr7_2:86840091-86840110 Msa1085820:CDS 40.0%
AGTAAGCCACAAAGAATGTC+AGG - chr7_2:86840171-86840190 None:intergenic 40.0%
GACATTCTTTGTGGCTTACT+TGG + chr7_2:86840171-86840190 Msa1085820:CDS 40.0%
! CCGTGTTGATGTAGAAAGTA+TGG - chr7_2:86840257-86840276 None:intergenic 40.0%
AATGACAACCCACCGTAATT+AGG + chr7_2:86840296-86840315 Msa1085820:intron 40.0%
ATGACAACCCACCGTAATTA+GGG + chr7_2:86840297-86840316 Msa1085820:intron 40.0%
GGATCAAAAGGCCCTAATTA+CGG - chr7_2:86840311-86840330 None:intergenic 40.0%
!! ACTAATCATTGACTCGGCAA+TGG + chr7_2:86840385-86840404 Msa1085820:intron 40.0%
!! CTAATCATTGACTCGGCAAT+GGG + chr7_2:86840386-86840405 Msa1085820:intron 40.0%
! CATAGTTGATGTGTTACCCT+TGG + chr7_2:86840457-86840476 Msa1085820:intron 40.0%
TATGACTACTCGCGTAAAGA+CGG - chr7_2:86840755-86840774 None:intergenic 40.0%
AGCAATGGCTGAACAATTCA+AGG + chr7_2:86840936-86840955 Msa1085820:intron 40.0%
! GTGATTTGCCTGCTATAAGT+TGG - chr7_2:86841098-86841117 None:intergenic 40.0%
TTCTGAACATGCTTAGACTC+TGG + chr7_2:86841142-86841161 Msa1085820:CDS 40.0%
GTAAGACAGTTAGCAGGTTT+AGG - chr7_2:86841316-86841335 None:intergenic 40.0%
AAACCTGCTAACTGTCTTAC+AGG + chr7_2:86841316-86841335 Msa1085820:intron 40.0%
CTATTTGCAGTGCATTTCAC+AGG + chr7_2:86841512-86841531 Msa1085820:CDS 40.0%
GTTACACTTACTCCATGTAC+TGG + chr7_2:86841633-86841652 Msa1085820:CDS 40.0%
GGTTACAATAGACCAGTACA+TGG - chr7_2:86841648-86841667 None:intergenic 40.0%
ATTGTAACCCTTACCACTGT+TGG + chr7_2:86841659-86841678 Msa1085820:CDS 40.0%
TAAATCTCCATAGCCAACAG+TGG - chr7_2:86841675-86841694 None:intergenic 40.0%
TGCAGAAAATACAACGGAGA+AGG + chr7_2:86841697-86841716 Msa1085820:CDS 40.0%
GGCCTCACTGCATATATTAT+CGG + chr7_2:86841752-86841771 Msa1085820:CDS 40.0%
GTCTTCCTAGTGGAAGTTAA+AGG + chr7_2:86841908-86841927 Msa1085820:intron 40.0%
TACTTACAGTGGGAGAATGT+CGG - chr7_2:86841997-86842016 None:intergenic 40.0%
GGGAAAGAAGATGTAGATCT+AGG + chr7_2:86842199-86842218 Msa1085820:intron 40.0%
TAAAGTTAGGAAATGGAGCC+TGG - chr7_2:86842246-86842265 None:intergenic 40.0%
! TAAGGTCTAAGAAGCATGTC+TGG - chr7_2:86842333-86842352 None:intergenic 40.0%
AGGGATATTTGCTCAAACCT+TGG - chr7_2:86842374-86842393 None:intergenic 40.0%
TTTGGTCCTTCAAACCTTCT+GGG - chr7_2:86843062-86843081 None:intergenic 40.0%
ATTTGGTCCTTCAAACCTTC+TGG - chr7_2:86843063-86843082 None:intergenic 40.0%
AGGTTTGAAGGACCAAATGT+TGG + chr7_2:86843065-86843084 Msa1085820:CDS 40.0%
!! ATACCGGCTCTAATTGCTTT+AGG - chr7_2:86843153-86843172 None:intergenic 40.0%
GAAAAGATGCTGAGCAATAC+CGG - chr7_2:86843169-86843188 None:intergenic 40.0%
ATCTGATACCTGTGTAGTGA+TGG - chr7_2:86843326-86843345 None:intergenic 40.0%
AGATGATGTCAACCTTTGAC+GGG - chr7_2:86843366-86843385 None:intergenic 40.0%
CATCTTGCAAAATGAGATGC+CGG + chr7_2:86843381-86843400 Msa1085820:CDS 40.0%
!! GCCGGCATATTTCTACATTT+TGG + chr7_2:86843399-86843418 Msa1085820:CDS 40.0%
!! CATTTTGGTATCTGGATCAG+TGG + chr7_2:86843414-86843433 Msa1085820:CDS 40.0%
ACTGAACCATTTCTAATCGC+AGG + chr7_2:86843504-86843523 Msa1085820:intron 40.0%
ACACATCCTGCGATTAGAAA+TGG - chr7_2:86843513-86843532 None:intergenic 40.0%
TTTGATGTGTTTGCTTCAGC+AGG - chr7_2:86843927-86843946 Msa1085830:intron 40.0%
GCTAGGTAGTAAGAGATACT+AGG + chr7_2:86844017-86844036 Msa1085820:intron 40.0%
GAGAATTGCCATTAGCTAAG+AGG - chr7_2:86844108-86844127 Msa1085830:intron 40.0%
CTTCTCACTGTATAAGGTTG+TGG - chr7_2:86844226-86844245 Msa1085830:intron 40.0%
!! GATGATCGATTCGTATAAGC+TGG - chr7_2:86844261-86844280 Msa1085830:intron 40.0%
TCATCATCATTTCAAGCAGC+TGG + chr7_2:86844276-86844295 Msa1085820:CDS 40.0%
GCCTTCCCATCTTCATTAAA+TGG - chr7_2:86844307-86844326 Msa1085830:intron 40.0%
CAGGAAAAATGTGGGGATTT+GGG - chr7_2:86844459-86844478 Msa1085830:intron 40.0%
TCAGGAAAAATGTGGGGATT+TGG - chr7_2:86844460-86844479 Msa1085830:intron 40.0%
! TTGTGGCTTGCAAGGATATT+TGG - chr7_2:86844518-86844537 Msa1085830:intron 40.0%
CAGTTTATGAAGGGCCTAAA+AGG + chr7_2:86844633-86844652 Msa1085820:intron 40.0%
TTTATGAAGGGCCTAAAAGG+CGG + chr7_2:86844636-86844655 Msa1085820:CDS 40.0%
AGTGTGTGGGAGAAAGATAA+CGG + chr7_2:86844929-86844948 Msa1085820:intron 40.0%
AATGTCCTGTTTGGGAGAAA+GGG - chr7_2:86845105-86845124 Msa1085830:intron 40.0%
GTGACATGAATGTCCTGTTT+GGG - chr7_2:86845113-86845132 Msa1085830:intron 40.0%
TCATGTCACCTAATGATGCA+TGG + chr7_2:86845124-86845143 Msa1085820:intron 40.0%
GTGGTTATCCATGCATCATT+AGG - chr7_2:86845135-86845154 Msa1085830:intron 40.0%
! TTTGTGCCCTCATTTTGTGT+CGG - chr7_2:86845544-86845563 Msa1085830:intron 40.0%
AGAAGGTAACCTTAATCCTG+TGG + chr7_2:86845603-86845622 Msa1085820:CDS 40.0%
! CCTTAATCCTGTGGATTGTA+CGG + chr7_2:86845612-86845631 Msa1085820:CDS 40.0%
TGAGTGGGTAGATATTGTGT+AGG + chr7_2:86845659-86845678 Msa1085820:intron 40.0%
CAAGAACCAGTTGACATTCA+AGG + chr7_2:86845692-86845711 Msa1085820:intron 40.0%
TTCAAGGGTTCTGCTAAACA+CGG + chr7_2:86845708-86845727 Msa1085820:intron 40.0%
ACACAAAGTCTGCCTTTGAA+TGG - chr7_2:86845808-86845827 Msa1085830:intron 40.0%
CACTAACACTTACACTTGGT+AGG - chr7_2:86845992-86846011 Msa1085830:intron 40.0%
GATATGTCATATGTCACGTG+GGG + chr7_2:86846017-86846036 Msa1085820:intron 40.0%
AAGATTGCCCCATGATAAAG+AGG + chr7_2:86846050-86846069 Msa1085820:intron 40.0%
TGTTGTGCCTCTTTATCATG+GGG - chr7_2:86846060-86846079 Msa1085830:intron 40.0%
GTGTTGTGCCTCTTTATCAT+GGG - chr7_2:86846061-86846080 Msa1085830:intron 40.0%
AGTGTTGTGCCTCTTTATCA+TGG - chr7_2:86846062-86846081 Msa1085830:intron 40.0%
! TTTTAAGCATGAGCACAGCA+AGG - chr7_2:86846114-86846133 Msa1085830:intron 40.0%
CGTAGTGTCACAACTTGATA+TGG + chr7_2:86846265-86846284 Msa1085820:intron 40.0%
CAGGGAAATATTAGGTAAGC+AGG - chr7_2:86846350-86846369 Msa1085830:intron 40.0%
!! TTTTGACTCTAATCGGGACT+AGG - chr7_2:86846442-86846461 Msa1085830:intron 40.0%
!!! CGTGGATTTTGACTCTAATC+GGG - chr7_2:86846448-86846467 Msa1085830:intron 40.0%
!!! CCGTGGATTTTGACTCTAAT+CGG - chr7_2:86846449-86846468 Msa1085830:intron 40.0%
CCGATTAGAGTCAAAATCCA+CGG + chr7_2:86846446-86846465 Msa1085820:CDS 40.0%
TCTGGTAGGATAATGAGCTT+TGG - chr7_2:86846509-86846528 Msa1085830:intron 40.0%
! GAAGATCTTTTCAGAGTAGC+AGG + chr7_2:86846536-86846555 Msa1085820:CDS 40.0%
! TCTTTTCAGAGTAGCAGGTA+TGG + chr7_2:86846541-86846560 Msa1085820:intron 40.0%
! CTTTTCAGAGTAGCAGGTAT+GGG + chr7_2:86846542-86846561 Msa1085820:intron 40.0%
CCAAAGATAGAAATAGAGGG+GGG + chr7_2:86846658-86846677 Msa1085820:intron 40.0%
CAAAGATAGAAATAGAGGGG+GGG + chr7_2:86846659-86846678 Msa1085820:intron 40.0%
AAAGATAGAAATAGAGGGGG+GGG + chr7_2:86846660-86846679 Msa1085820:intron 40.0%
!! TTATTATGAAGCACTGTGGG+TGG - chr7_2:86846726-86846745 Msa1085830:intron 40.0%
CTGTATGCAGAGAACAAGTT+TGG + chr7_2:86846815-86846834 Msa1085820:intron 40.0%
TAACTCATCGTCCTCTCTTA+GGG - chr7_2:86846897-86846916 Msa1085830:intron 40.0%
ATAACTCATCGTCCTCTCTT+AGG - chr7_2:86846898-86846917 Msa1085830:intron 40.0%
GACGTTCAAGTGGCGAAATA+AGG + chr7_2:86839805-86839824 Msa1085820:CDS 45.0%
! TCAGGATTAGTGCCAAATGC+TGG - chr7_2:86839861-86839880 None:intergenic 45.0%
AGGTCGAAGTAACCTTCATC+AGG - chr7_2:86839879-86839898 None:intergenic 45.0%
CTCCCTATGATCGCAGATAT+AGG + chr7_2:86839916-86839935 Msa1085820:CDS 45.0%
TGTCATTACACAGACAGCAC+AGG - chr7_2:86839993-86840012 None:intergenic 45.0%
ATTGTGGCAAACGTTCCTAG+TGG + chr7_2:86840027-86840046 Msa1085820:CDS 45.0%
GCAAACGTTCCTAGTGGTAT+TGG + chr7_2:86840033-86840052 Msa1085820:CDS 45.0%
! AACGTTCCTAGTGGTATTGG+TGG + chr7_2:86840036-86840055 Msa1085820:CDS 45.0%
AGTACACCACCAATACCACT+AGG - chr7_2:86840045-86840064 None:intergenic 45.0%
!! TATTGGTGGTGTACTCAGCA+TGG + chr7_2:86840050-86840069 Msa1085820:CDS 45.0%
!! ATTGGTGGTGTACTCAGCAT+GGG + chr7_2:86840051-86840070 Msa1085820:CDS 45.0%
CAAAAGGCCCTAATTACGGT+GGG - chr7_2:86840307-86840326 None:intergenic 45.0%
TCAAAAGGCCCTAATTACGG+TGG - chr7_2:86840308-86840327 None:intergenic 45.0%
ATACCTTGTGGCACCTAGTT+GGG - chr7_2:86840332-86840351 None:intergenic 45.0%
AATACCTTGTGGCACCTAGT+TGG - chr7_2:86840333-86840352 None:intergenic 45.0%
AAGCCATGGTCAATACCTTG+TGG - chr7_2:86840344-86840363 None:intergenic 45.0%
ATTCCAAAGGGTCTAAGCCA+TGG - chr7_2:86840358-86840377 None:intergenic 45.0%
AAAGGGGGCAGACAACAAAA+CGG - chr7_2:86840838-86840857 None:intergenic 45.0%
AGAGTGGAAGCTAGATCCAT+GGG - chr7_2:86841057-86841076 None:intergenic 45.0%
TATCTGCTGAAATGGCAGAG+TGG - chr7_2:86841073-86841092 None:intergenic 45.0%
GTGTTAGTGAGCTCTTCTCA+AGG + chr7_2:86841175-86841194 Msa1085820:CDS 45.0%
ATGGCAGAACATGTGCGAAA+TGG - chr7_2:86841281-86841300 None:intergenic 45.0%
TAGCCTGTAAGACAGTTAGC+AGG - chr7_2:86841322-86841341 None:intergenic 45.0%
ACAGGCTAGAGAAAGACATC+AGG + chr7_2:86841334-86841353 Msa1085820:intron 45.0%
CAGGCTAGAGAAAGACATCA+GGG + chr7_2:86841335-86841354 Msa1085820:intron 45.0%
! TCACAGGCTGCGTGTATTTT+TGG + chr7_2:86841528-86841547 Msa1085820:CDS 45.0%
!!! AGGCTGCGTGTATTTTTGGT+TGG + chr7_2:86841532-86841551 Msa1085820:CDS 45.0%
GCTTTCCATCACAAATCACC+CGG + chr7_2:86841554-86841573 Msa1085820:CDS 45.0%
! TGTTTCCGGGTGATTTGTGA+TGG - chr7_2:86841562-86841581 None:intergenic 45.0%
!! TAAGCATAGGAGTGTCGGAT+CGG + chr7_2:86841610-86841629 Msa1085820:CDS 45.0%
TCCATAGCCAACAGTGGTAA+GGG - chr7_2:86841669-86841688 None:intergenic 45.0%
CGGAAACATGACAAATCTGG+TGG + chr7_2:86841772-86841791 Msa1085820:CDS 45.0%
! AGCAAAAATGGACTCCCAGA+AGG + chr7_2:86843045-86843064 Msa1085820:CDS 45.0%
GCTGTGTATGTGCCAACATT+TGG - chr7_2:86843080-86843099 None:intergenic 45.0%
!! ACAGCAAGAAGAAGTGCTAC+AGG + chr7_2:86843122-86843141 Msa1085820:CDS 45.0%
CTGCCTAAAGCAATTAGAGC+CGG + chr7_2:86843147-86843166 Msa1085820:CDS 45.0%
CATGACATCCATCACTACAC+AGG + chr7_2:86843315-86843334 Msa1085820:intron 45.0%
AGCAGAATACTACCCGTCAA+AGG + chr7_2:86843351-86843370 Msa1085820:CDS 45.0%
ATGGGTCTGAACAGGTATGA+TGG + chr7_2:86843545-86843564 Msa1085820:intron 45.0%
AACCTGAGGCAGAAGTCATT+TGG + chr7_2:86843842-86843861 Msa1085820:intron 45.0%
ACCTGAGGCAGAAGTCATTT+GGG + chr7_2:86843843-86843862 Msa1085820:intron 45.0%
TGCTCGTAAGTGCTTGAAGA+TGG - chr7_2:86843903-86843922 Msa1085830:three_prime_UTR 45.0%
CAAACTAGATCCTGGAAGCA+TGG + chr7_2:86844171-86844190 Msa1085820:CDS 45.0%
ATTTCTCCTACCATGCTTCC+AGG - chr7_2:86844184-86844203 Msa1085830:intron 45.0%
! GGAAGCATGGTAGGAGAAAT+AGG + chr7_2:86844184-86844203 Msa1085820:CDS 45.0%
ACCAACTTTACTCAGGTTCG+TGG + chr7_2:86844334-86844353 Msa1085820:intron 45.0%
ACCACGAACCTGAGTAAAGT+TGG - chr7_2:86844338-86844357 Msa1085830:intron 45.0%
TTATGAAGGGCCTAAAAGGC+GGG + chr7_2:86844637-86844656 Msa1085820:CDS 45.0%
! TCTGAGTGATTTGGAAGACG+AGG + chr7_2:86844692-86844711 Msa1085820:CDS 45.0%
ATGTCCTGTTTGGGAGAAAG+GGG - chr7_2:86845104-86845123 Msa1085830:intron 45.0%
GAATGTCCTGTTTGGGAGAA+AGG - chr7_2:86845106-86845125 Msa1085830:intron 45.0%
GGTGACATGAATGTCCTGTT+TGG - chr7_2:86845114-86845133 Msa1085830:intron 45.0%
TCATGGACCAATTCTCGCAA+TGG + chr7_2:86845229-86845248 Msa1085820:intron 45.0%
CAGCATCCGACACAAAATGA+GGG + chr7_2:86845535-86845554 Msa1085820:intron 45.0%
CCGTACAATCCACAGGATTA+AGG - chr7_2:86845615-86845634 Msa1085830:intron 45.0%
TTACTGACCGTACAATCCAC+AGG - chr7_2:86845622-86845641 Msa1085830:intron 45.0%
! TGTGGATTGTACGGTCAGTA+AGG + chr7_2:86845621-86845640 Msa1085820:intron 45.0%
! GTGGATTGTACGGTCAGTAA+GGG + chr7_2:86845622-86845641 Msa1085820:intron 45.0%
CAGAACCCTTGAATGTCAAC+TGG - chr7_2:86845701-86845720 Msa1085830:intron 45.0%
! AAGAGGCACAACACTAATCC+TGG + chr7_2:86846067-86846086 Msa1085820:intron 45.0%
GATCTTCGACTGAATCTGGT+AGG - chr7_2:86846523-86846542 Msa1085830:intron 45.0%
!! CCCCCCTCTATTTCTATCTT+TGG - chr7_2:86846661-86846680 Msa1085830:intron 45.0%
AAGATAGAAATAGAGGGGGG+GGG + chr7_2:86846661-86846680 Msa1085820:intron 45.0%
!! ATTTATTAAAATTTAATTGT+AGG - chr7_2:86842686-86842705 None:intergenic 5.0%
! AGGGCCTTTTGATCCCAACT+AGG + chr7_2:86840316-86840335 Msa1085820:intron 50.0%
GGCACCTAGTTGGGATCAAA+AGG - chr7_2:86840323-86840342 None:intergenic 50.0%
!! GTGCCACAAGGTATTGACCA+TGG + chr7_2:86840338-86840357 Msa1085820:intron 50.0%
TGACCATGGCTTAGACCCTT+TGG + chr7_2:86840352-86840371 Msa1085820:intron 50.0%
GAGTGGAAGCTAGATCCATG+GGG - chr7_2:86841056-86841075 None:intergenic 50.0%
CAGAGTGGAAGCTAGATCCA+TGG - chr7_2:86841058-86841077 None:intergenic 50.0%
CAGGCAAATCACACGACAGA+GGG + chr7_2:86841106-86841125 Msa1085820:CDS 50.0%
AGGCAAATCACACGACAGAG+GGG + chr7_2:86841107-86841126 Msa1085820:CDS 50.0%
TGCTTAGACTCTGGCGATTG+AGG + chr7_2:86841151-86841170 Msa1085820:CDS 50.0%
ACAAATCACCCGGAAACACG+TGG + chr7_2:86841564-86841583 Msa1085820:CDS 50.0%
TTCCCAATCCACGTGTTTCC+GGG - chr7_2:86841575-86841594 None:intergenic 50.0%
CTTCCCAATCCACGTGTTTC+CGG - chr7_2:86841576-86841595 None:intergenic 50.0%
!! AAACACGTGGATTGGGAAGC+AGG + chr7_2:86841577-86841596 Msa1085820:CDS 50.0%
!! AAGCATAGGAGTGTCGGATC+GGG + chr7_2:86841611-86841630 Msa1085820:CDS 50.0%
! ACCCTTACCACTGTTGGCTA+TGG + chr7_2:86841665-86841684 Msa1085820:CDS 50.0%
CTCCATAGCCAACAGTGGTA+AGG - chr7_2:86841670-86841689 None:intergenic 50.0%
CTCTGTCAGAACCTTTGCCA+TGG + chr7_2:86841802-86841821 Msa1085820:CDS 50.0%
AGTTAGGAAATGGAGCCTGG+AGG - chr7_2:86842243-86842262 None:intergenic 50.0%
TGGACTCCCAGAAGGTTTGA+AGG + chr7_2:86843053-86843072 Msa1085820:CDS 50.0%
! CGGCTCTAATTGCTTTAGGC+AGG - chr7_2:86843149-86843168 None:intergenic 50.0%
TCCCAAATGACTTCTGCCTC+AGG - chr7_2:86843847-86843866 Msa1085830:three_prime_UTR 50.0%
GAGGCAGAAGTCATTTGGGA+AGG + chr7_2:86843847-86843866 Msa1085820:intron 50.0%
ATGGAACAGAAGGTCGAGCT+AGG + chr7_2:86844000-86844019 Msa1085820:intron 50.0%
! CTAGATCCTGGAAGCATGGT+AGG + chr7_2:86844175-86844194 Msa1085820:CDS 50.0%
! TGAGGTCTTTGTGGCTTGCA+AGG - chr7_2:86844526-86844545 Msa1085830:intron 50.0%
TATGAAGGGCCTAAAAGGCG+GGG + chr7_2:86844638-86844657 Msa1085820:CDS 50.0%
GGTCCCCTTTCCTCAAAACA+TGG - chr7_2:86845015-86845034 Msa1085830:intron 50.0%
TGTTTGGGAGAAAGGGGCAA+AGG - chr7_2:86845098-86845117 Msa1085830:intron 50.0%
TTTGCCCCTTTCTCCCAAAC+AGG + chr7_2:86845097-86845116 Msa1085820:intron 50.0%
GCAGCATCCGACACAAAATG+AGG + chr7_2:86845534-86845553 Msa1085820:intron 50.0%
TTGCTATGGCAAGGTAGCCT+AGG + chr7_2:86846214-86846233 Msa1085820:intron 50.0%
AGATAGAAATAGAGGGGGGG+GGG + chr7_2:86846662-86846681 Msa1085820:intron 50.0%
AGATCTATGCGCCCTAAGAG+AGG + chr7_2:86846883-86846902 Msa1085820:CDS 50.0%
! GATCCCAACTAGGTGCCACA+AGG + chr7_2:86840326-86840345 Msa1085820:intron 55.0%
GCAGGCAAATCACACGACAG+AGG + chr7_2:86841105-86841124 Msa1085820:CDS 55.0%
CACGACAGAGGGGAAGTCTT+TGG + chr7_2:86841117-86841136 Msa1085820:CDS 55.0%
TCACCCGGAAACACGTGGAT+TGG + chr7_2:86841569-86841588 Msa1085820:CDS 55.0%
CACCCGGAAACACGTGGATT+GGG + chr7_2:86841570-86841589 Msa1085820:CDS 55.0%
!! GTGGATTGGGAAGCAGGTAG+AGG + chr7_2:86841583-86841602 Msa1085820:CDS 55.0%
TAGGAAATGGAGCCTGGAGG+TGG - chr7_2:86842240-86842259 None:intergenic 55.0%
GAGGAAAGGGGACCAAGTGA+AGG + chr7_2:86845021-86845040 Msa1085820:intron 55.0%
TGGGAGAAAGGGGCAAAGGA+GGG - chr7_2:86845094-86845113 Msa1085830:intron 55.0%
TTGGGAGAAAGGGGCAAAGG+AGG - chr7_2:86845095-86845114 Msa1085830:intron 55.0%
GACTAGGCTTGACAGTGGAC+TGG - chr7_2:86846426-86846445 Msa1085830:intron 55.0%
ATCGGGACTAGGCTTGACAG+TGG - chr7_2:86846431-86846450 Msa1085830:intron 55.0%
TTTCGTTGGGGTGATGTCCG+TGG - chr7_2:86846466-86846485 Msa1085830:intron 55.0%
GATAGAAATAGAGGGGGGGG+GGG + chr7_2:86846663-86846682 Msa1085820:intron 55.0%
ATAGAAATAGAGGGGGGGGG+GGG + chr7_2:86846664-86846683 Msa1085820:intron 55.0%
! CTTCCAGCACCCCGCCTTTT+AGG - chr7_2:86844650-86844669 Msa1085830:intron 60.0%
AAATAGAGGGGGGGGGGGGA+AGG + chr7_2:86846668-86846687 Msa1085820:intron 65.0%
GGGCCTAAAAGGCGGGGTGC+TGG + chr7_2:86844644-86844663 Msa1085820:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 86839780 86846986 86839780 ID=Msa1085820;Name=Msa1085820
chr7_2 mRNA 86839780 86846986 86839780 ID=Msa1085820-mRNA-1;Parent=Msa1085820;Name=Msa1085820-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.91|0.84|1|1|1|13|58|634
chr7_2 exon 86839780 86839937 86839780 ID=Msa1085820-mRNA-1:exon:23573;Parent=Msa1085820-mRNA-1
chr7_2 exon 86840027 86840242 86840027 ID=Msa1085820-mRNA-1:exon:23574;Parent=Msa1085820-mRNA-1
chr7_2 exon 86841032 86841196 86841032 ID=Msa1085820-mRNA-1:exon:23575;Parent=Msa1085820-mRNA-1
chr7_2 exon 86841338 86841395 86841338 ID=Msa1085820-mRNA-1:exon:23576;Parent=Msa1085820-mRNA-1
chr7_2 exon 86841506 86841823 86841506 ID=Msa1085820-mRNA-1:exon:23577;Parent=Msa1085820-mRNA-1
chr7_2 exon 86843012 86843251 86843012 ID=Msa1085820-mRNA-1:exon:23578;Parent=Msa1085820-mRNA-1
chr7_2 exon 86843337 86843435 86843337 ID=Msa1085820-mRNA-1:exon:23579;Parent=Msa1085820-mRNA-1
chr7_2 exon 86843526 86843558 86843526 ID=Msa1085820-mRNA-1:exon:23580;Parent=Msa1085820-mRNA-1
chr7_2 exon 86844163 86844348 86844163 ID=Msa1085820-mRNA-1:exon:23581;Parent=Msa1085820-mRNA-1
chr7_2 exon 86844636 86844713 86844636 ID=Msa1085820-mRNA-1:exon:23582;Parent=Msa1085820-mRNA-1
chr7_2 exon 86845538 86845637 86845538 ID=Msa1085820-mRNA-1:exon:23583;Parent=Msa1085820-mRNA-1
chr7_2 exon 86846408 86846557 86846408 ID=Msa1085820-mRNA-1:exon:23584;Parent=Msa1085820-mRNA-1
chr7_2 exon 86846825 86846986 86846825 ID=Msa1085820-mRNA-1:exon:23585;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86839780 86839937 86839780 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86840027 86840242 86840027 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86841032 86841196 86841032 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86841338 86841395 86841338 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86841506 86841823 86841506 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86843012 86843251 86843012 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86843337 86843435 86843337 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86843526 86843558 86843526 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86844163 86844348 86844163 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86844636 86844713 86844636 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86845538 86845637 86845538 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86846408 86846557 86846408 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 CDS 86846825 86846928 86846825 ID=Msa1085820-mRNA-1:cds;Parent=Msa1085820-mRNA-1
chr7_2 three_prime_UTR 86846929 86846986 86846929 ID=Msa1085820-mRNA-1:three_prime_utr;Parent=Msa1085820-mRNA-1
Gene Sequence

>Msa1085820

ATGACGTTGCCATCTCTAGTTAGAAGACGTTCAAGTGGCGAAATAAGGAACTTGGCCTCAATTTCTAGCAGTCTTTTACCAGCATTTGGCACTAATCCTGATGAAGGTTACTTCGACCTAAAAAAATATGTTATTGCTCCCTATGATCGCAGATATAGATTGTGGCAAACGTTCCTAGTGGTATTGGTGGTGTACTCAGCATGGGCATCTCCATTCGAGTTAGCTTTCAGAGAGATGTCAATTGGGTCCATGTTGATTGCTGATCTTGTTGTCGATGCCTTCTTTGCATTTGACATAATCCTGACATTCTTTGTGGCTTACTTGGATAAATCAACTTATTTCCTTGTTGATGACCATAAGAAGATTGCTATCAGGTATGTCAAACATTTATTCTTCCCCATGGATCTAGCTTCCACTCTGCCATTTCAGCAGATATACCAACTTATAGCAGGCAAATCACACGACAGAGGGGAAGTCTTTGGCTTTCTGAACATGCTTAGACTCTGGCGATTGAGGCGTGTTAGTGAGCTCTTCTCAAGGCTAGAGAAAGACATCAGGGTCAGCTACTCAGTAACAAGAGTCTGTAAACTGTTATGCGTTACGCTATTTGCAGTGCATTTCACAGGCTGCGTGTATTTTTGGTTGGCTTTCCATCACAAATCACCCGGAAACACGTGGATTGGGAAGCAGGTAGAGGATTTTAAGCATAGGAGTGTCGGATCGGGTTACACTTACTCCATGTACTGGTCTATTGTAACCCTTACCACTGTTGGCTATGGAGATTTACATGCAGAAAATACAACGGAGAAGGTTTTCAATATTTTTTATATGCTGTTTAACATCGGCCTCACTGCATATATTATCGGAAACATGACAAATCTGGTGGTTCATAGCTCTGTCAGAACCTTTGCCATGAGGGACGCCTTCAACAAAATATTACAATATGCGAGCAAAAATGGACTCCCAGAAGGTTTGAAGGACCAAATGTTGGCACATACACAGCTGAAGTTCAAGACAGCAGAGTTACAGCAAGAAGAAGTGCTACAGGACCTGCCTAAAGCAATTAGAGCCGGTATTGCTCAGCATCTTTTCCACAACGTAGTTGAAAAAACAAATTTATTTAAAGGAGTCTCGGATGATTTTATATCCCAGATGGTATCAGATATGAAAGCAGAATACTACCCGTCAAAGGTTGACATCATCTTGCAAAATGAGATGCCGGCATATTTCTACATTTTGGTATCTGGATCAGTGGATGTGTTGATTTTAAAGAATGGGTCTGAACAGTTTTTGTTCAAACTAGATCCTGGAAGCATGGTAGGAGAAATAGGTGTGATGTTTAATATCCCACAACCTTATACAGTGAGAAGTAGAAGACTCTCCCAGCTTATACGAATCGATCATCATCATTTCAAGCAGCTGGTGAAACCATTTAATGAAGATGGGAAGGCAATTATCACCAACTTTACTCAGTTTATGAAGGGCCTAAAAGGCGGGGTGCTGGAAGAAATACCGTATGTAACAGAATTTCTGAGTGATTTGGAAGACGAGCATCCGACACAAAATGAGGGCACAAATGATGACATTTCAAAGTACCATGAAGAAAATCCATATGAAGAAGGTAACCTTAATCCTGTGGATTGTACGGTCAGAGAAACAGAAAATTCCAGTCCACTGTCAAGCCTAGTCCCGATTAGAGTCAAAATCCACGGACATCACCCCAACGAAAACATTGAAAATGGAACAACACCAAAGCTCATTATCCTACCAGATTCAGTCGAAGATCTTTTCAGAGTAGCAGAGAACAAGTTTGGAAAAAGAGGAAGCAAAATTCTTATGGCTGATGGCTCAGAAGTAGAAGATCTATGCGCCCTAAGAGAGGACGATGAGTTATATATCATCTAA
Protein sequence

>Msa1085820

MTLPSLVRRRSSGEIRNLASISSSLLPAFGTNPDEGYFDLKKYVIAPYDRRYRLWQTFLVVLVVYSAWASPFELAFREMSIGSMLIADLVVDAFFAFDIILTFFVAYLDKSTYFLVDDHKKIAIRYVKHLFFPMDLASTLPFQQIYQLIAGKSHDRGEVFGFLNMLRLWRLRRVSELFSRLEKDIRVSYSVTRVCKLLCVTLFAVHFTGCVYFWLAFHHKSPGNTWIGKQVEDFKHRSVGSGYTYSMYWSIVTLTTVGYGDLHAENTTEKVFNIFYMLFNIGLTAYIIGNMTNLVVHSSVRTFAMRDAFNKILQYASKNGLPEGLKDQMLAHTQLKFKTAELQQEEVLQDLPKAIRAGIAQHLFHNVVEKTNLFKGVSDDFISQMVSDMKAEYYPSKVDIILQNEMPAYFYILVSGSVDVLILKNGSEQFLFKLDPGSMVGEIGVMFNIPQPYTVRSRRLSQLIRIDHHHFKQLVKPFNEDGKAIITNFTQFMKGLKGGVLEEIPYVTEFLSDLEDEHPTQNEGTNDDISKYHEENPYEEGNLNPVDCTVRETENSSPLSSLVPIRVKIHGHHPNENIENGTTPKLIILPDSVEDLFRVAENKFGKRGSKILMADGSEVEDLCALREDDELYII*