AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0985380


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0985380 MtrunA17_Chr6g0463511 59.536 388 26 6 1 257 1 388 7.86e-118 342
Msa0985380 MtrunA17_Chr6g0463461 61.905 231 70 6 1 219 18 242 1.55e-53 174
Msa0985380 MtrunA17_Chr6g0463461 48.649 111 27 3 120 202 13 121 5.67e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 113 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGTATTTGTATGGCTTCTT+TGG 0.283192 6_4:+31792582 Msa0985380:CDS
GGTGACTTATACTTGTAAAC+TGG 0.331968 6_4:+31792244 Msa0985380:CDS
GGAGATTTGTACTTGTAAAC+TGG 0.358966 6_4:+31792456 Msa0985380:CDS
GGGGAATAGACTGGAGGAGG+AGG 0.398185 6_4:+31791869 Msa0985380:CDS
GCTTCTTTGGTGACGGTGGT+GGG 0.402798 6_4:+31792595 Msa0985380:CDS
GGTGATTTGTACTTGTATAC+TGG 0.412405 6_4:+31792546 Msa0985380:CDS
GGCTTCTTTGGTGACGGTGG+TGG 0.416342 6_4:+31792594 Msa0985380:CDS
GGTGGTGAAGAGACAGGTGG+TGG 0.422163 6_4:+31791917 Msa0985380:CDS
GGAGATTTATACTTGTAAAC+TGG 0.423699 6_4:+31792193 Msa0985380:CDS
GGTGAAGAGACAGGTGGTGG+AGG 0.434370 6_4:+31791920 Msa0985380:CDS
GGAGGGGAATAGACTGGAGG+AGG 0.437132 6_4:+31791866 Msa0985380:CDS
GGAGGAGAAGGGTATTTGTA+TGG 0.437814 6_4:+31792573 Msa0985380:CDS
TTGTACTTGTAAACTGGTGG+TGG 0.439635 6_4:+31792492 Msa0985380:CDS
GGAGATTGATACTTATATAC+TGG 0.445144 6_4:+31792516 Msa0985380:CDS
GGAGACTTATACTTGTAAAC+TGG 0.445660 6_4:+31791941 Msa0985380:CDS
GGAGACTTATACTTGTAAAC+TGG 0.445660 6_4:+31792145 Msa0985380:CDS
GGAGACTTATACTTGTAAAC+TGG 0.445660 6_4:+31792387 Msa0985380:CDS
GGTGAGTAGACAGGTGGAGG+AGG 0.447436 6_4:+31792124 Msa0985380:CDS
GGTGAGTAGACAGGTGGAGG+AGG 0.447436 6_4:+31792366 Msa0985380:CDS
GGTGGTGAGTAGACAGGTGG+AGG 0.450883 6_4:+31792070 Msa0985380:intron
GGTGGTGAGTAGACAGGTGG+AGG 0.450883 6_4:+31792121 Msa0985380:CDS
GGTGGTGAGTAGACAGGTGG+AGG 0.450883 6_4:+31792220 Msa0985380:CDS
GAGTACTTGTAAGGAGGAGG+AGG 0.454603 6_4:+31792318 Msa0985380:CDS
TAGTAAGGCTTTGGTGGTGG+TGG 0.456114 6_4:+31792675 Msa0985380:CDS
TAGATGTAATGTGGTGGAGG+AGG 0.457140 6_4:+31791848 Msa0985380:CDS
GGTGAGTAGACAGGTGGAGG+TGG 0.460258 6_4:+31792172 Msa0985380:CDS
GGTGGTGAGTAGACAGGTGG+AGG 0.460575 6_4:+31792169 Msa0985380:CDS
GGTGGTGATGAATACTTGTA+TGG 0.460614 6_4:+31792414 Msa0985380:CDS
AGGGGAGATGAGTACTTGTA+AGG 0.463436 6_4:+31792309 Msa0985380:intron
GGAGGAGGTGGTGAAGAGAC+AGG 0.464962 6_4:+31791911 Msa0985380:CDS
GGTGAGTAGACAGGTGGAGG+AGG 0.465535 6_4:+31792073 Msa0985380:CDS
GGTGAGTAGACAGGTGGAGG+AGG 0.465535 6_4:+31792223 Msa0985380:CDS
GGTGGTGAGTAGACAGGTGG+AGG 0.475118 6_4:+31792363 Msa0985380:CDS
TAGTAGTAAGGCTTTGGTGG+TGG 0.475130 6_4:+31792672 Msa0985380:CDS
TAGACATAATGTGGAGGAGG+TGG 0.478250 6_4:+31791899 Msa0985380:CDS
GGTGGAGGAGGGGAATAGAC+TGG 0.480854 6_4:+31791860 Msa0985380:CDS
TGTGGTGAATGCACCGGTGG+TGG 0.485282 6_4:+31792639 Msa0985380:CDS
GGTGGAGAGTGGTAGTAGTA+AGG 0.485294 6_4:+31792660 Msa0985380:CDS
GGTGACTTGTACTTGTAAAC+TGG 0.491598 6_4:+31792486 Msa0985380:CDS
TATACTGGTGGTGGAGGAGA+AGG 0.494237 6_4:+31792561 Msa0985380:CDS
TGGTAGTAGTAAGGCTTTGG+TGG 0.496300 6_4:+31792669 Msa0985380:CDS
AGATGTAATGTGGTGGAGGA+GGG 0.496432 6_4:+31791849 Msa0985380:CDS
TTGTATGGCTTCTTTGGTGA+CGG 0.501102 6_4:+31792588 Msa0985380:CDS
GGTGAAGAGTAGACATAATG+TGG 0.502131 6_4:+31791890 Msa0985380:CDS
GAGTGGTAGTAGTAAGGCTT+TGG 0.502362 6_4:+31792666 Msa0985380:CDS
GATGAGTACTTGTAAGGAGG+AGG 0.504651 6_4:+31792315 Msa0985380:CDS
TTGTACTTGTATACTGGTGG+TGG 0.511286 6_4:+31792552 Msa0985380:CDS
TACTTGTAAACTGGTGGTGG+GGG 0.516526 6_4:+31792495 Msa0985380:CDS
GGTGGAGGTGGTGAGTAGAC+AGG 0.522728 6_4:+31792115 Msa0985380:CDS
TACTTGTAAACTGGTGGTGG+TGG 0.524734 6_4:+31792396 Msa0985380:CDS
CTTCTTTGGTGACGGTGGTG+GGG 0.525313 6_4:+31792596 Msa0985380:CDS
TTGTTTGCTGAAATTTGAGA+TGG 0.526040 6_4:+31792714 Msa0985380:CDS
GGAGGAGGGGAATAGACTGG+AGG 0.528264 6_4:+31791863 Msa0985380:CDS
TACTTATATACTGGTGGAGG+AGG 0.529243 6_4:+31792525 Msa0985380:CDS
GAGTAGACATAATGTGGAGG+AGG 0.529331 6_4:+31791896 Msa0985380:CDS
GAGATTTGTACTTGTAAACT+GGG 0.534809 6_4:+31792457 Msa0985380:CDS
GATGTAATGTGGTGGAGGAG+GGG 0.538758 6_4:+31791850 Msa0985380:CDS
GGTGAATGCACCGGTGGTGG+TGG 0.539739 6_4:+31792642 Msa0985380:CDS
TGTACTTGTAAACTGGTGGT+GGG 0.540940 6_4:+31792493 Msa0985380:CDS
TACTTGTAAACTGGTGGAGG+TGG 0.545632 6_4:+31791950 Msa0985380:CDS
TACTTGTAGACTGGTGGAGG+TGG 0.548453 6_4:+31792103 Msa0985380:CDS
TTATACTTGTAAACTGGTGG+AGG 0.549517 6_4:+31792199 Msa0985380:CDS
CTGTAATGGTAAGGAGGATG+TGG 0.552371 6_4:+31792621 Msa0985380:CDS
GGTGGAGGTGGTGAGTAGAC+AGG 0.556465 6_4:+31792064 Msa0985380:intron
GGTGGAGGTGGTGAGTAGAC+AGG 0.556465 6_4:+31792214 Msa0985380:CDS
TACTTGTAAACTGGTGGAGG+TGG 0.556646 6_4:+31792202 Msa0985380:CDS
GTACTTGTAAACTGGTGGTG+GGG 0.556863 6_4:+31792494 Msa0985380:CDS
GAATAGATGTAATGTGGTGG+AGG 0.559250 6_4:+31791845 Msa0985380:CDS
ACTGGTGGTGGTGAGTAGAC+AGG 0.561157 6_4:+31792357 Msa0985380:CDS
CTACCACTCTCCACCACCAC+CGG 0.561981 6_4:-31792652 None:intergenic
ACGGTGGTGGGGAACTGTAA+TGG 0.565330 6_4:+31792607 Msa0985380:CDS
TACTTGTATACTGGTGGTGG+AGG 0.569213 6_4:+31792555 Msa0985380:CDS
GATTTATACTTGTAAACTGG+TGG 0.573499 6_4:+31792196 Msa0985380:CDS
GGAGATGAGTACTTGTAAGG+AGG 0.579045 6_4:+31792312 Msa0985380:CDS
GACTTATACTTGTAAACTGG+TGG 0.580181 6_4:+31791944 Msa0985380:CDS
ACTGGTGGTGGTGAGTAGAC+AGG 0.582055 6_4:+31792163 Msa0985380:CDS
GGAGGTGGTGAGTAGACAGG+TGG 0.584342 6_4:+31792067 Msa0985380:intron
GGAGGTGGTGAGTAGACAGG+TGG 0.584342 6_4:+31792118 Msa0985380:CDS
GGAGGTGGTGAGTAGACAGG+TGG 0.584342 6_4:+31792217 Msa0985380:CDS
TGATACTTATATACTGGTGG+AGG 0.586048 6_4:+31792522 Msa0985380:CDS
TTATACTTGTAAACTGGTGG+AGG 0.588467 6_4:+31791947 Msa0985380:CDS
GACTTATACTTGTAGACTGG+TGG 0.591374 6_4:+31792097 Msa0985380:CDS
GCACCGGTGGTGGTGGAGAG+TGG 0.594578 6_4:+31792649 Msa0985380:CDS
GGTGGGGAACTGTAATGGTA+AGG 0.594716 6_4:+31792612 Msa0985380:CDS
GGTGACTTATACTTGTAGAC+TGG 0.596006 6_4:+31792094 Msa0985380:CDS
GGTGACTTATACTTGTAGAC+TGG 0.596006 6_4:+31792339 Msa0985380:CDS
GTGACTTATACTTGTAAACT+GGG 0.597919 6_4:+31792245 Msa0985380:CDS
GGGGAACTGTAATGGTAAGG+AGG 0.603092 6_4:+31792615 Msa0985380:CDS
TGTTTGCTGAAATTTGAGAT+GGG 0.609462 6_4:+31792715 Msa0985380:CDS
ATACTGGTGGTGGAGGAGAA+GGG 0.613099 6_4:+31792562 Msa0985380:CDS
TTATACTTGTAAACTGGTGG+TGG 0.619288 6_4:+31792151 Msa0985380:CDS
TTATACTTGTAAACTGGTGG+TGG 0.619288 6_4:+31792393 Msa0985380:CDS
GATTGATACTTATATACTGG+TGG 0.620526 6_4:+31792519 Msa0985380:CDS
TTATACTTGTAGACTGGTGG+TGG 0.624160 6_4:+31792345 Msa0985380:CDS
GGTGATGAATAGATGTAATG+TGG 0.625789 6_4:+31791839 None:intergenic
GATTTGTACTTGTATACTGG+TGG 0.629724 6_4:+31792549 Msa0985380:CDS
TTATACTTGTAGACTGGTGG+AGG 0.632298 6_4:+31792100 Msa0985380:CDS
GAAGAGTAGACATAATGTGG+AGG 0.633916 6_4:+31791893 Msa0985380:CDS
GACTTATACTTGTAAACTGG+TGG 0.642386 6_4:+31792148 Msa0985380:CDS
GACTTATACTTGTAAACTGG+TGG 0.642386 6_4:+31792390 Msa0985380:CDS
TATGGCTTCTTTGGTGACGG+TGG 0.648912 6_4:+31792591 Msa0985380:CDS
GGAGGATGTGGTGAATGCAC+CGG 0.653086 6_4:+31792633 Msa0985380:CDS
GGATGTGGTGAATGCACCGG+TGG 0.655371 6_4:+31792636 Msa0985380:CDS
GACTTATACTTGTAGACTGG+TGG 0.656990 6_4:+31792342 Msa0985380:CDS
GGTGGTGGTGAGTAGACAGG+TGG 0.658147 6_4:+31792360 Msa0985380:CDS
GATGAATAGATGTAATGTGG+TGG 0.661003 6_4:+31791842 None:intergenic
GACTTATACTTGTAAACTGG+GGG 0.663638 6_4:+31792247 Msa0985380:CDS
GATTTGTACTTGTAAACTGG+GGG 0.664232 6_4:+31792459 Msa0985380:CDS
GACTTGTACTTGTAAACTGG+TGG 0.666361 6_4:+31792489 Msa0985380:CDS
GGAGGTGGTGAAGAGACAGG+TGG 0.675568 6_4:+31791914 Msa0985380:CDS
GGTGGTGGTGAGTAGACAGG+TGG 0.678423 6_4:+31792166 Msa0985380:CDS
AGATTTGTACTTGTAAACTG+GGG 0.678643 6_4:+31792458 Msa0985380:CDS
TGACTTATACTTGTAAACTG+GGG 0.682366 6_4:+31792246 Msa0985380:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TGAATACTTGTATGGTTTTT+TGG + chr6_4:31792422-31792441 Msa0985380:CDS 25.0%
!!! GAATACTTGTATGGTTTTTT+GGG + chr6_4:31792423-31792442 Msa0985380:CDS 25.0%
!!! TGAATACTTGTATGGTTTTT+TGG + chr6_4:31792422-31792441 Msa0985380:CDS 25.0%
!!! GAATACTTGTATGGTTTTTT+GGG + chr6_4:31792423-31792442 Msa0985380:CDS 25.0%
GGTGACTTATATTTGTAAAC+TGG + chr6_4:31791992-31792011 Msa0985380:intron 30.0%
GACTTATATTTGTAAACTGG+TGG + chr6_4:31791995-31792014 Msa0985380:intron 30.0%
TTATATTTGTAAACTGGTGG+TGG + chr6_4:31791998-31792017 Msa0985380:intron 30.0%
GGTGATTTATACTTGTAAAC+TGG + chr6_4:31792043-31792062 Msa0985380:intron 30.0%
GATTTATACTTGTAAACTGG+TGG + chr6_4:31792046-31792065 Msa0985380:intron 30.0%
GGAGATTTATACTTGTAAAC+TGG + chr6_4:31792193-31792212 Msa0985380:CDS 30.0%
GATTTATACTTGTAAACTGG+TGG + chr6_4:31792046-31792065 Msa0985380:intron 30.0%
GTGACTTATACTTGTAAACT+GGG + chr6_4:31792245-31792264 Msa0985380:CDS 30.0%
TGACTTATACTTGTAAACTG+GGG + chr6_4:31792246-31792265 Msa0985380:CDS 30.0%
GAGATTTGTACTTGTAAACT+GGG + chr6_4:31792457-31792476 Msa0985380:CDS 30.0%
AGATTTGTACTTGTAAACTG+GGG + chr6_4:31792458-31792477 Msa0985380:CDS 30.0%
GGAGATTGATACTTATATAC+TGG + chr6_4:31792516-31792535 Msa0985380:CDS 30.0%
GATTGATACTTATATACTGG+TGG + chr6_4:31792519-31792538 Msa0985380:CDS 30.0%
! TTGTTTGCTGAAATTTGAGA+TGG + chr6_4:31792714-31792733 Msa0985380:CDS 30.0%
! TGTTTGCTGAAATTTGAGAT+GGG + chr6_4:31792715-31792734 Msa0985380:CDS 30.0%
GGTGACTTATATTTGTAAAC+TGG + chr6_4:31791992-31792011 Msa0985380:intron 30.0%
GACTTATATTTGTAAACTGG+TGG + chr6_4:31791995-31792014 Msa0985380:intron 30.0%
TTATATTTGTAAACTGGTGG+TGG + chr6_4:31791998-31792017 Msa0985380:intron 30.0%
GGTGATTTATACTTGTAAAC+TGG + chr6_4:31792043-31792062 Msa0985380:intron 30.0%
GATTTATACTTGTAAACTGG+TGG + chr6_4:31792046-31792065 Msa0985380:intron 30.0%
GGAGATTTATACTTGTAAAC+TGG + chr6_4:31792193-31792212 Msa0985380:CDS 30.0%
GATTTATACTTGTAAACTGG+TGG + chr6_4:31792046-31792065 Msa0985380:intron 30.0%
GTGACTTATACTTGTAAACT+GGG + chr6_4:31792245-31792264 Msa0985380:CDS 30.0%
TGACTTATACTTGTAAACTG+GGG + chr6_4:31792246-31792265 Msa0985380:CDS 30.0%
GAGATTTGTACTTGTAAACT+GGG + chr6_4:31792457-31792476 Msa0985380:CDS 30.0%
AGATTTGTACTTGTAAACTG+GGG + chr6_4:31792458-31792477 Msa0985380:CDS 30.0%
GGAGATTGATACTTATATAC+TGG + chr6_4:31792516-31792535 Msa0985380:CDS 30.0%
GATTGATACTTATATACTGG+TGG + chr6_4:31792519-31792538 Msa0985380:CDS 30.0%
! TTGTTTGCTGAAATTTGAGA+TGG + chr6_4:31792714-31792733 Msa0985380:CDS 30.0%
! TGTTTGCTGAAATTTGAGAT+GGG + chr6_4:31792715-31792734 Msa0985380:CDS 30.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+TGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
GGTGACTTATACTTGTAAAC+TGG + chr6_4:31792244-31792263 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+GGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TACTTGTATGGTTTCTTTGG+TGG + chr6_4:31792283-31792302 Msa0985380:intron 35.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+TGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
!!! TACTTGTATGGTTTTTTGGG+TGG + chr6_4:31792426-31792445 Msa0985380:CDS 35.0%
GGAGATTTGTACTTGTAAAC+TGG + chr6_4:31792456-31792475 Msa0985380:CDS 35.0%
GATTTGTACTTGTAAACTGG+GGG + chr6_4:31792459-31792478 Msa0985380:CDS 35.0%
TGATACTTATATACTGGTGG+AGG + chr6_4:31792522-31792541 Msa0985380:CDS 35.0%
! GGTGATTTGTACTTGTATAC+TGG + chr6_4:31792546-31792565 Msa0985380:CDS 35.0%
GATTTGTACTTGTATACTGG+TGG + chr6_4:31792549-31792568 Msa0985380:CDS 35.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+TGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+AGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
GGTGACTTATACTTGTAAAC+TGG + chr6_4:31792244-31792263 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+GGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TACTTGTATGGTTTCTTTGG+TGG + chr6_4:31792283-31792302 Msa0985380:intron 35.0%
GGAGACTTATACTTGTAAAC+TGG + chr6_4:31791941-31791960 Msa0985380:CDS 35.0%
GACTTATACTTGTAAACTGG+TGG + chr6_4:31791944-31791963 Msa0985380:CDS 35.0%
TTATACTTGTAAACTGGTGG+TGG + chr6_4:31791947-31791966 Msa0985380:CDS 35.0%
!!! TACTTGTATGGTTTTTTGGG+TGG + chr6_4:31792426-31792445 Msa0985380:CDS 35.0%
GGAGATTTGTACTTGTAAAC+TGG + chr6_4:31792456-31792475 Msa0985380:CDS 35.0%
GATTTGTACTTGTAAACTGG+GGG + chr6_4:31792459-31792478 Msa0985380:CDS 35.0%
TGATACTTATATACTGGTGG+AGG + chr6_4:31792522-31792541 Msa0985380:CDS 35.0%
! GGTGATTTGTACTTGTATAC+TGG + chr6_4:31792546-31792565 Msa0985380:CDS 35.0%
GATTTGTACTTGTATACTGG+TGG + chr6_4:31792549-31792568 Msa0985380:CDS 35.0%
GAATAGATGTAATGTGGTGG+AGG + chr6_4:31791845-31791864 Msa0985380:CDS 40.0%
GGTGAAGAGTAGACATAATG+TGG + chr6_4:31791890-31791909 Msa0985380:CDS 40.0%
GAAGAGTAGACATAATGTGG+AGG + chr6_4:31791893-31791912 Msa0985380:CDS 40.0%
!! TATTTGTAAACTGGTGGTGG+TGG + chr6_4:31792001-31792020 Msa0985380:intron 40.0%
GGTGACTTATACTTGTAGAC+TGG + chr6_4:31792094-31792113 Msa0985380:CDS 40.0%
GACTTATACTTGTAGACTGG+TGG + chr6_4:31792097-31792116 Msa0985380:CDS 40.0%
TTATACTTGTAGACTGGTGG+AGG + chr6_4:31792100-31792119 Msa0985380:CDS 40.0%
TTATACTTGTAAACTGGGGG+TGG + chr6_4:31792250-31792269 Msa0985380:CDS 40.0%
GGGTACTTGTATGGTTTCTT+TGG + chr6_4:31792280-31792299 Msa0985380:intron 40.0%
TTGTATGGTTTCTTTGGTGG+TGG + chr6_4:31792286-31792305 Msa0985380:intron 40.0%
GGTGACTTATACTTGTAGAC+TGG + chr6_4:31792094-31792113 Msa0985380:CDS 40.0%
GACTTATACTTGTAGACTGG+TGG + chr6_4:31792097-31792116 Msa0985380:CDS 40.0%
TTATACTTGTAGACTGGTGG+TGG + chr6_4:31792100-31792119 Msa0985380:CDS 40.0%
! GGTGGTGATGAATACTTGTA+TGG + chr6_4:31792414-31792433 Msa0985380:CDS 40.0%
!!! TTGTATGGTTTTTTGGGTGG+TGG + chr6_4:31792429-31792448 Msa0985380:CDS 40.0%
!!! TGTATGGTTTTTTGGGTGGT+GGG + chr6_4:31792430-31792449 Msa0985380:CDS 40.0%
! GGTGACTTGTACTTGTAAAC+TGG + chr6_4:31792486-31792505 Msa0985380:CDS 40.0%
GACTTGTACTTGTAAACTGG+TGG + chr6_4:31792489-31792508 Msa0985380:CDS 40.0%
TTGTACTTGTAAACTGGTGG+TGG + chr6_4:31792492-31792511 Msa0985380:CDS 40.0%
TGTACTTGTAAACTGGTGGT+GGG + chr6_4:31792493-31792512 Msa0985380:CDS 40.0%
TACTTATATACTGGTGGAGG+AGG + chr6_4:31792525-31792544 Msa0985380:CDS 40.0%
TTGTACTTGTATACTGGTGG+TGG + chr6_4:31792552-31792571 Msa0985380:CDS 40.0%
GGGTATTTGTATGGCTTCTT+TGG + chr6_4:31792582-31792601 Msa0985380:CDS 40.0%
TTGTATGGCTTCTTTGGTGA+CGG + chr6_4:31792588-31792607 Msa0985380:CDS 40.0%
GAATAGATGTAATGTGGTGG+AGG + chr6_4:31791845-31791864 Msa0985380:CDS 40.0%
GGTGAAGAGTAGACATAATG+TGG + chr6_4:31791890-31791909 Msa0985380:CDS 40.0%
GAAGAGTAGACATAATGTGG+AGG + chr6_4:31791893-31791912 Msa0985380:CDS 40.0%
!! TATTTGTAAACTGGTGGTGG+TGG + chr6_4:31792001-31792020 Msa0985380:intron 40.0%
GGTGACTTATACTTGTAGAC+TGG + chr6_4:31792094-31792113 Msa0985380:CDS 40.0%
GACTTATACTTGTAGACTGG+TGG + chr6_4:31792097-31792116 Msa0985380:CDS 40.0%
TTATACTTGTAGACTGGTGG+AGG + chr6_4:31792100-31792119 Msa0985380:CDS 40.0%
TTATACTTGTAAACTGGGGG+TGG + chr6_4:31792250-31792269 Msa0985380:CDS 40.0%
GGGTACTTGTATGGTTTCTT+TGG + chr6_4:31792280-31792299 Msa0985380:intron 40.0%
TTGTATGGTTTCTTTGGTGG+TGG + chr6_4:31792286-31792305 Msa0985380:intron 40.0%
GGTGACTTATACTTGTAGAC+TGG + chr6_4:31792094-31792113 Msa0985380:CDS 40.0%
GACTTATACTTGTAGACTGG+TGG + chr6_4:31792097-31792116 Msa0985380:CDS 40.0%
TTATACTTGTAGACTGGTGG+TGG + chr6_4:31792100-31792119 Msa0985380:CDS 40.0%
! GGTGGTGATGAATACTTGTA+TGG + chr6_4:31792414-31792433 Msa0985380:CDS 40.0%
!!! TTGTATGGTTTTTTGGGTGG+TGG + chr6_4:31792429-31792448 Msa0985380:CDS 40.0%
!!! TGTATGGTTTTTTGGGTGGT+GGG + chr6_4:31792430-31792449 Msa0985380:CDS 40.0%
! GGTGACTTGTACTTGTAAAC+TGG + chr6_4:31792486-31792505 Msa0985380:CDS 40.0%
GACTTGTACTTGTAAACTGG+TGG + chr6_4:31792489-31792508 Msa0985380:CDS 40.0%
TTGTACTTGTAAACTGGTGG+TGG + chr6_4:31792492-31792511 Msa0985380:CDS 40.0%
TGTACTTGTAAACTGGTGGT+GGG + chr6_4:31792493-31792512 Msa0985380:CDS 40.0%
TACTTATATACTGGTGGAGG+AGG + chr6_4:31792525-31792544 Msa0985380:CDS 40.0%
TTGTACTTGTATACTGGTGG+TGG + chr6_4:31792552-31792571 Msa0985380:CDS 40.0%
GGGTATTTGTATGGCTTCTT+TGG + chr6_4:31792582-31792601 Msa0985380:CDS 40.0%
TTGTATGGCTTCTTTGGTGA+CGG + chr6_4:31792588-31792607 Msa0985380:CDS 40.0%
! TAGATGTAATGTGGTGGAGG+AGG + chr6_4:31791848-31791867 Msa0985380:CDS 45.0%
! AGATGTAATGTGGTGGAGGA+GGG + chr6_4:31791849-31791868 Msa0985380:CDS 45.0%
GAGTAGACATAATGTGGAGG+AGG + chr6_4:31791896-31791915 Msa0985380:CDS 45.0%
TAGACATAATGTGGAGGAGG+TGG + chr6_4:31791899-31791918 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
!! TATGGTTTCTTTGGTGGTGG+AGG + chr6_4:31792289-31792308 Msa0985380:intron 45.0%
!! ATGGTTTCTTTGGTGGTGGA+GGG + chr6_4:31792290-31792309 Msa0985380:intron 45.0%
AGGGGAGATGAGTACTTGTA+AGG + chr6_4:31792309-31792328 Msa0985380:intron 45.0%
GGAGATGAGTACTTGTAAGG+AGG + chr6_4:31792312-31792331 Msa0985380:CDS 45.0%
GATGAGTACTTGTAAGGAGG+AGG + chr6_4:31792315-31792334 Msa0985380:CDS 45.0%
!! TACTTGTAAACTGGTGGTGG+TGG + chr6_4:31792154-31792173 Msa0985380:CDS 45.0%
!!! GTATGGTTTTTTGGGTGGTG+GGG + chr6_4:31792431-31792450 Msa0985380:CDS 45.0%
!!! TATGGTTTTTTGGGTGGTGG+GGG + chr6_4:31792432-31792451 Msa0985380:CDS 45.0%
TTGTACTTGTAAACTGGGGG+AGG + chr6_4:31792462-31792481 Msa0985380:CDS 45.0%
! GTACTTGTAAACTGGTGGTG+GGG + chr6_4:31792494-31792513 Msa0985380:CDS 45.0%
!! TACTTGTAAACTGGTGGTGG+GGG + chr6_4:31792154-31792173 Msa0985380:CDS 45.0%
!! TACTTGTATACTGGTGGTGG+AGG + chr6_4:31792555-31792574 Msa0985380:CDS 45.0%
!! GGAGGAGAAGGGTATTTGTA+TGG + chr6_4:31792573-31792592 Msa0985380:CDS 45.0%
CTGTAATGGTAAGGAGGATG+TGG + chr6_4:31792621-31792640 Msa0985380:CDS 45.0%
GAGTGGTAGTAGTAAGGCTT+TGG + chr6_4:31792666-31792685 Msa0985380:CDS 45.0%
! TGGTAGTAGTAAGGCTTTGG+TGG + chr6_4:31792669-31792688 Msa0985380:CDS 45.0%
! TAGTAGTAAGGCTTTGGTGG+TGG + chr6_4:31792672-31792691 Msa0985380:CDS 45.0%
! TAGATGTAATGTGGTGGAGG+AGG + chr6_4:31791848-31791867 Msa0985380:CDS 45.0%
! AGATGTAATGTGGTGGAGGA+GGG + chr6_4:31791849-31791868 Msa0985380:CDS 45.0%
GAGTAGACATAATGTGGAGG+AGG + chr6_4:31791896-31791915 Msa0985380:CDS 45.0%
TAGACATAATGTGGAGGAGG+TGG + chr6_4:31791899-31791918 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
TACTTGTAAACTGGTGGAGG+TGG + chr6_4:31791950-31791969 Msa0985380:CDS 45.0%
!! TATGGTTTCTTTGGTGGTGG+AGG + chr6_4:31792289-31792308 Msa0985380:intron 45.0%
!! ATGGTTTCTTTGGTGGTGGA+GGG + chr6_4:31792290-31792309 Msa0985380:intron 45.0%
AGGGGAGATGAGTACTTGTA+AGG + chr6_4:31792309-31792328 Msa0985380:intron 45.0%
GGAGATGAGTACTTGTAAGG+AGG + chr6_4:31792312-31792331 Msa0985380:CDS 45.0%
GATGAGTACTTGTAAGGAGG+AGG + chr6_4:31792315-31792334 Msa0985380:CDS 45.0%
!! TACTTGTAAACTGGTGGTGG+TGG + chr6_4:31792154-31792173 Msa0985380:CDS 45.0%
!!! GTATGGTTTTTTGGGTGGTG+GGG + chr6_4:31792431-31792450 Msa0985380:CDS 45.0%
!!! TATGGTTTTTTGGGTGGTGG+GGG + chr6_4:31792432-31792451 Msa0985380:CDS 45.0%
TTGTACTTGTAAACTGGGGG+AGG + chr6_4:31792462-31792481 Msa0985380:CDS 45.0%
! GTACTTGTAAACTGGTGGTG+GGG + chr6_4:31792494-31792513 Msa0985380:CDS 45.0%
!! TACTTGTAAACTGGTGGTGG+GGG + chr6_4:31792154-31792173 Msa0985380:CDS 45.0%
!! TACTTGTATACTGGTGGTGG+AGG + chr6_4:31792555-31792574 Msa0985380:CDS 45.0%
!! GGAGGAGAAGGGTATTTGTA+TGG + chr6_4:31792573-31792592 Msa0985380:CDS 45.0%
CTGTAATGGTAAGGAGGATG+TGG + chr6_4:31792621-31792640 Msa0985380:CDS 45.0%
GAGTGGTAGTAGTAAGGCTT+TGG + chr6_4:31792666-31792685 Msa0985380:CDS 45.0%
! TGGTAGTAGTAAGGCTTTGG+TGG + chr6_4:31792669-31792688 Msa0985380:CDS 45.0%
! TAGTAGTAAGGCTTTGGTGG+TGG + chr6_4:31792672-31792691 Msa0985380:CDS 45.0%
! GATGTAATGTGGTGGAGGAG+GGG + chr6_4:31791850-31791869 Msa0985380:CDS 50.0%
TACTTGTAGACTGGTGGAGG+TGG + chr6_4:31792103-31792122 Msa0985380:CDS 50.0%
TACTTGTAAACTGGGGGTGG+TGG + chr6_4:31792253-31792272 Msa0985380:CDS 50.0%
GGTGGAGATGGGTACTTGTA+TGG + chr6_4:31792271-31792290 Msa0985380:intron 50.0%
!! TGGTTTCTTTGGTGGTGGAG+GGG + chr6_4:31792291-31792310 Msa0985380:intron 50.0%
GAGTACTTGTAAGGAGGAGG+AGG + chr6_4:31792318-31792337 Msa0985380:CDS 50.0%
TACTTGTAAACTGGGGGAGG+AGG + chr6_4:31792465-31792484 Msa0985380:CDS 50.0%
!! TATACTGGTGGTGGAGGAGA+AGG + chr6_4:31792561-31792580 Msa0985380:CDS 50.0%
!! ATACTGGTGGTGGAGGAGAA+GGG + chr6_4:31792562-31792581 Msa0985380:CDS 50.0%
!! TATGGCTTCTTTGGTGACGG+TGG + chr6_4:31792591-31792610 Msa0985380:CDS 50.0%
GGTGGGGAACTGTAATGGTA+AGG + chr6_4:31792612-31792631 Msa0985380:CDS 50.0%
GGGGAACTGTAATGGTAAGG+AGG + chr6_4:31792615-31792634 Msa0985380:CDS 50.0%
GGTGGAGAGTGGTAGTAGTA+AGG + chr6_4:31792660-31792679 Msa0985380:CDS 50.0%
!! TAGTAAGGCTTTGGTGGTGG+TGG + chr6_4:31792675-31792694 Msa0985380:CDS 50.0%
! GATGTAATGTGGTGGAGGAG+GGG + chr6_4:31791850-31791869 Msa0985380:CDS 50.0%
TACTTGTAGACTGGTGGAGG+TGG + chr6_4:31792103-31792122 Msa0985380:CDS 50.0%
TACTTGTAAACTGGGGGTGG+TGG + chr6_4:31792253-31792272 Msa0985380:CDS 50.0%
GGTGGAGATGGGTACTTGTA+TGG + chr6_4:31792271-31792290 Msa0985380:intron 50.0%
!! TGGTTTCTTTGGTGGTGGAG+GGG + chr6_4:31792291-31792310 Msa0985380:intron 50.0%
GAGTACTTGTAAGGAGGAGG+AGG + chr6_4:31792318-31792337 Msa0985380:CDS 50.0%
TACTTGTAAACTGGGGGAGG+AGG + chr6_4:31792465-31792484 Msa0985380:CDS 50.0%
!! TATACTGGTGGTGGAGGAGA+AGG + chr6_4:31792561-31792580 Msa0985380:CDS 50.0%
!! ATACTGGTGGTGGAGGAGAA+GGG + chr6_4:31792562-31792581 Msa0985380:CDS 50.0%
!! TATGGCTTCTTTGGTGACGG+TGG + chr6_4:31792591-31792610 Msa0985380:CDS 50.0%
GGTGGGGAACTGTAATGGTA+AGG + chr6_4:31792612-31792631 Msa0985380:CDS 50.0%
GGGGAACTGTAATGGTAAGG+AGG + chr6_4:31792615-31792634 Msa0985380:CDS 50.0%
GGTGGAGAGTGGTAGTAGTA+AGG + chr6_4:31792660-31792679 Msa0985380:CDS 50.0%
!! TAGTAAGGCTTTGGTGGTGG+TGG + chr6_4:31792675-31792694 Msa0985380:CDS 50.0%
GAGGTGGTGAGTAGACAGGT+GGG + chr6_4:31791966-31791985 Msa0985380:intron 55.0%
AGGTGGTGAGTAGACAGGTG+GGG + chr6_4:31791967-31791986 Msa0985380:intron 55.0%
! GTGGTGGAGAGTAGACAGGT+GGG + chr6_4:31792017-31792036 Msa0985380:intron 55.0%
TGGTGGAGAGTAGACAGGTG+GGG + chr6_4:31792018-31792037 Msa0985380:intron 55.0%
!! ACTGGTGGTGGTGAGTAGAC+AGG + chr6_4:31792163-31792182 Msa0985380:CDS 55.0%
!! TAAACTGGGGGTGGTGGAGA+TGG + chr6_4:31792259-31792278 Msa0985380:CDS 55.0%
!! AAACTGGGGGTGGTGGAGAT+GGG + chr6_4:31792260-31792279 Msa0985380:CDS 55.0%
!! ACTGGTGGTGGTGAGTAGAC+AGG + chr6_4:31792163-31792182 Msa0985380:CDS 55.0%
!! GCTTCTTTGGTGACGGTGGT+GGG + chr6_4:31792595-31792614 Msa0985380:CDS 55.0%
!! CTTCTTTGGTGACGGTGGTG+GGG + chr6_4:31792596-31792615 Msa0985380:CDS 55.0%
!! ACGGTGGTGGGGAACTGTAA+TGG + chr6_4:31792607-31792626 Msa0985380:CDS 55.0%
GGAGGATGTGGTGAATGCAC+CGG + chr6_4:31792633-31792652 Msa0985380:CDS 55.0%
GAGGTGGTGAGTAGACAGGT+GGG + chr6_4:31791966-31791985 Msa0985380:intron 55.0%
AGGTGGTGAGTAGACAGGTG+GGG + chr6_4:31791967-31791986 Msa0985380:intron 55.0%
! GTGGTGGAGAGTAGACAGGT+GGG + chr6_4:31792017-31792036 Msa0985380:intron 55.0%
TGGTGGAGAGTAGACAGGTG+GGG + chr6_4:31792018-31792037 Msa0985380:intron 55.0%
!! ACTGGTGGTGGTGAGTAGAC+AGG + chr6_4:31792163-31792182 Msa0985380:CDS 55.0%
!! TAAACTGGGGGTGGTGGAGA+TGG + chr6_4:31792259-31792278 Msa0985380:CDS 55.0%
!! AAACTGGGGGTGGTGGAGAT+GGG + chr6_4:31792260-31792279 Msa0985380:CDS 55.0%
!! ACTGGTGGTGGTGAGTAGAC+AGG + chr6_4:31792163-31792182 Msa0985380:CDS 55.0%
!! GCTTCTTTGGTGACGGTGGT+GGG + chr6_4:31792595-31792614 Msa0985380:CDS 55.0%
!! CTTCTTTGGTGACGGTGGTG+GGG + chr6_4:31792596-31792615 Msa0985380:CDS 55.0%
!! ACGGTGGTGGGGAACTGTAA+TGG + chr6_4:31792607-31792626 Msa0985380:CDS 55.0%
GGAGGATGTGGTGAATGCAC+CGG + chr6_4:31792633-31792652 Msa0985380:CDS 55.0%
GGTGGAGGAGGGGAATAGAC+TGG + chr6_4:31791860-31791879 Msa0985380:CDS 60.0%
GGAGGAGGGGAATAGACTGG+AGG + chr6_4:31791863-31791882 Msa0985380:CDS 60.0%
GGAGGGGAATAGACTGGAGG+AGG + chr6_4:31791866-31791885 Msa0985380:CDS 60.0%
GGGGAATAGACTGGAGGAGG+AGG + chr6_4:31791869-31791888 Msa0985380:CDS 60.0%
GGAGGAGGTGGTGAAGAGAC+AGG + chr6_4:31791911-31791930 Msa0985380:CDS 60.0%
GGAGGTGGTGAAGAGACAGG+TGG + chr6_4:31791914-31791933 Msa0985380:CDS 60.0%
GGTGGTGAAGAGACAGGTGG+TGG + chr6_4:31791917-31791936 Msa0985380:CDS 60.0%
! GGTGAAGAGACAGGTGGTGG+AGG + chr6_4:31791920-31791939 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+GGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
!! GGTGGTGGTGGAGAGTAGAC+AGG + chr6_4:31792013-31792032 Msa0985380:intron 60.0%
!! GGTGGTGGAGAGTAGACAGG+TGG + chr6_4:31792016-31792035 Msa0985380:intron 60.0%
GGTGGAGAGTAGACAGGTGG+GGG + chr6_4:31792019-31792038 Msa0985380:intron 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
! GGTGGTGGTGAGTAGACAGG+TGG + chr6_4:31792166-31792185 Msa0985380:CDS 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+TGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
! GGTGGTGGTGAGTAGACAGG+TGG + chr6_4:31792166-31792185 Msa0985380:CDS 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
!!! GGTTTTTTGGGTGGTGGGGG+TGG + chr6_4:31792435-31792454 Msa0985380:CDS 60.0%
!! GGCTTCTTTGGTGACGGTGG+TGG + chr6_4:31792594-31792613 Msa0985380:CDS 60.0%
GGATGTGGTGAATGCACCGG+TGG + chr6_4:31792636-31792655 Msa0985380:CDS 60.0%
! TGTGGTGAATGCACCGGTGG+TGG + chr6_4:31792639-31792658 Msa0985380:CDS 60.0%
CTACCACTCTCCACCACCAC+CGG - chr6_4:31792655-31792674 None:intergenic 60.0%
GGTGGAGGAGGGGAATAGAC+TGG + chr6_4:31791860-31791879 Msa0985380:CDS 60.0%
GGAGGAGGGGAATAGACTGG+AGG + chr6_4:31791863-31791882 Msa0985380:CDS 60.0%
GGAGGGGAATAGACTGGAGG+AGG + chr6_4:31791866-31791885 Msa0985380:CDS 60.0%
GGGGAATAGACTGGAGGAGG+AGG + chr6_4:31791869-31791888 Msa0985380:CDS 60.0%
GGAGGAGGTGGTGAAGAGAC+AGG + chr6_4:31791911-31791930 Msa0985380:CDS 60.0%
GGAGGTGGTGAAGAGACAGG+TGG + chr6_4:31791914-31791933 Msa0985380:CDS 60.0%
GGTGGTGAAGAGACAGGTGG+TGG + chr6_4:31791917-31791936 Msa0985380:CDS 60.0%
! GGTGAAGAGACAGGTGGTGG+AGG + chr6_4:31791920-31791939 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+GGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
!! GGTGGTGGTGGAGAGTAGAC+AGG + chr6_4:31792013-31792032 Msa0985380:intron 60.0%
!! GGTGGTGGAGAGTAGACAGG+TGG + chr6_4:31792016-31792035 Msa0985380:intron 60.0%
GGTGGAGAGTAGACAGGTGG+GGG + chr6_4:31792019-31792038 Msa0985380:intron 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
! GGTGGTGGTGAGTAGACAGG+TGG + chr6_4:31792166-31792185 Msa0985380:CDS 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+TGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
GGTGGAGGTGGTGAGTAGAC+AGG + chr6_4:31791962-31791981 Msa0985380:intron 60.0%
GGAGGTGGTGAGTAGACAGG+TGG + chr6_4:31791965-31791984 Msa0985380:intron 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
! GGTGGTGGTGAGTAGACAGG+TGG + chr6_4:31792166-31792185 Msa0985380:CDS 60.0%
GGTGGTGAGTAGACAGGTGG+AGG + chr6_4:31791968-31791987 Msa0985380:intron 60.0%
GGTGAGTAGACAGGTGGAGG+AGG + chr6_4:31792073-31792092 Msa0985380:CDS 60.0%
!!! GGTTTTTTGGGTGGTGGGGG+TGG + chr6_4:31792435-31792454 Msa0985380:CDS 60.0%
!! GGCTTCTTTGGTGACGGTGG+TGG + chr6_4:31792594-31792613 Msa0985380:CDS 60.0%
GGATGTGGTGAATGCACCGG+TGG + chr6_4:31792636-31792655 Msa0985380:CDS 60.0%
! TGTGGTGAATGCACCGGTGG+TGG + chr6_4:31792639-31792658 Msa0985380:CDS 60.0%
CTACCACTCTCCACCACCAC+CGG - chr6_4:31792655-31792674 None:intergenic 60.0%
GGTGAGTAGACAGGTGGGGG+AGG + chr6_4:31791971-31791990 Msa0985380:intron 65.0%
GGAGAGTAGACAGGTGGGGG+TGG + chr6_4:31792022-31792041 Msa0985380:intron 65.0%
! GGTGAATGCACCGGTGGTGG+TGG + chr6_4:31792642-31792661 Msa0985380:CDS 65.0%
GGTGAGTAGACAGGTGGGGG+AGG + chr6_4:31791971-31791990 Msa0985380:intron 65.0%
GGAGAGTAGACAGGTGGGGG+TGG + chr6_4:31792022-31792041 Msa0985380:intron 65.0%
! GGTGAATGCACCGGTGGTGG+TGG + chr6_4:31792642-31792661 Msa0985380:CDS 65.0%
!! GCACCGGTGGTGGTGGAGAG+TGG + chr6_4:31792649-31792668 Msa0985380:CDS 70.0%
!! GCACCGGTGGTGGTGGAGAG+TGG + chr6_4:31792649-31792668 Msa0985380:CDS 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 31791843 31792744 31791843 ID=Msa0985380;Name=Msa0985380
chr6_4 mRNA 31791843 31792744 31791843 ID=Msa0985380-mRNA-1;Parent=Msa0985380;Name=Msa0985380-mRNA-1;_AED=0.18;_eAED=0.20;_QI=0|0|0|1|0|0|3|0|257
chr6_4 exon 31791843 31791971 31791843 ID=Msa0985380-mRNA-1:exon:8495;Parent=Msa0985380-mRNA-1
chr6_4 exon 31792071 31792281 31792071 ID=Msa0985380-mRNA-1:exon:8496;Parent=Msa0985380-mRNA-1
chr6_4 exon 31792311 31792744 31792311 ID=Msa0985380-mRNA-1:exon:8497;Parent=Msa0985380-mRNA-1
chr6_4 CDS 31791843 31791971 31791843 ID=Msa0985380-mRNA-1:cds;Parent=Msa0985380-mRNA-1
chr6_4 CDS 31792071 31792281 31792071 ID=Msa0985380-mRNA-1:cds;Parent=Msa0985380-mRNA-1
chr6_4 CDS 31792311 31792744 31792311 ID=Msa0985380-mRNA-1:cds;Parent=Msa0985380-mRNA-1
Gene Sequence

>Msa0985380

ATGAATAGATGTAATGTGGTGGAGGAGGGGAATAGACTGGAGGAGGAGGTGAAGAGTAGACATAATGTGGAGGAGGTGGTGAAGAGACAGGTGGTGGAGGAGACTTATACTTGTAAACTGGTGGAGGTGGTGGTGAGTAGACAGGTGGAGGAGGTGACTTATACTTGTAGACTGGTGGAGGTGGTGAGTAGACAGGTGGAGGAGGAGACTTATACTTGTAAACTGGTGGTGGTGAGTAGACAGGTGGAGGTGGAGATTTATACTTGTAAACTGGTGGAGGTGGTGAGTAGACAGGTGGAGGAGGTGACTTATACTTGTAAACTGGGGGTGGTGGAGATGGGGGAGATGAGTACTTGTAAGGAGGAGGAGGTGACTTATACTTGTAGACTGGTGGTGGTGAGTAGACAGGTGGAGGAGGAGACTTATACTTGTAAACTGGTGGTGGTGGTGATGAATACTTGTATGGTTTTTTGGGTGGTGGGGGTGGAGATTTGTACTTGTAAACTGGGGGAGGAGGTGACTTGTACTTGTAAACTGGTGGTGGGGGAGATTGATACTTATATACTGGTGGAGGAGGTGATTTGTACTTGTATACTGGTGGTGGAGGAGAAGGGTATTTGTATGGCTTCTTTGGTGACGGTGGTGGGGAACTGTAATGGTAAGGAGGATGTGGTGAATGCACCGGTGGTGGTGGAGAGTGGTAGTAGTAAGGCTTTGGTGGTGGTGGAGATGAATAGATGTAATTGTTTGCTGAAATTTGAGATGGGAAGCTAA

Protein sequence

>Msa0985380

MNRCNVVEEGNRLEEEVKSRHNVEEVVKRQVVEETYTCKLVEVVVSRQVEEVTYTCRLVEVVSRQVEEETYTCKLVVVSRQVEVEIYTCKLVEVVSRQVEEVTYTCKLGVVEMGEMSTCKEEEVTYTCRLVVVSRQVEEETYTCKLVVVVMNTCMVFWVVGVEICTCKLGEEVTCTCKLVVGEIDTYILVEEVICTCILVVEEKGICMASLVTVVGNCNGKEDVVNAPVVVESGSSKALVVVEMNRCNCLLKFEMGS*