AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0320140


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0320140 MtrunA17_Chr2g0295021 100.000 141 0 0 1 141 1 141 1.17e-95 278
Msa0320140 MtrunA17_Chr2g0295021 76.667 150 21 1 141 276 8 157 2.42e-74 224
Msa0320140 MtrunA17_Chr2g0295001 100.000 141 0 0 1 141 1 141 1.17e-95 278
Msa0320140 MtrunA17_Chr2g0295001 76.667 150 21 1 141 276 8 157 2.42e-74 224
Msa0320140 MtrunA17_Chr2g0295041 87.417 151 5 1 141 277 8 158 4.58e-88 259
Msa0320140 MtrunA17_Chr2g0295041 82.979 141 24 0 1 141 1 141 1.99e-79 237
Msa0320140 MtrunA17_Chr2g0295051 86.525 141 19 0 1 141 1 141 7.93e-82 243
Msa0320140 MtrunA17_Chr2g0295051 78.000 150 19 1 141 276 8 157 1.14e-74 225
Msa0320140 MtrunA17_Chr2g0295064 85.106 141 21 0 1 141 68 208 1.52e-80 242
Msa0320140 MtrunA17_Chr2g0295064 80.795 151 15 1 141 277 75 225 2.40e-79 239
Msa0320140 MtrunA17_Chr4g0067951 72.340 141 39 0 1 141 1 141 2.93e-68 208
Msa0320140 MtrunA17_Chr4g0067951 66.225 151 37 1 141 277 8 158 8.14e-62 192
Msa0320140 MtrunA17_Chr6g0462311 70.922 141 41 0 1 141 1 141 7.29e-67 205
Msa0320140 MtrunA17_Chr6g0462311 64.901 151 39 1 141 277 8 158 1.97e-60 189
Msa0320140 MtrunA17_Chr6g0462291 70.714 140 41 0 1 140 1 140 5.52e-66 203
Msa0320140 MtrunA17_Chr6g0462291 63.158 133 35 1 141 259 8 140 1.75e-47 156
Msa0320140 MtrunA17_Chr2g0295141 63.571 140 51 0 1 140 1 140 4.22e-56 177
Msa0320140 MtrunA17_Chr2g0295141 54.667 150 54 1 141 276 8 157 2.10e-48 158
Msa0320140 MtrunA17_Chr2g0295091 60.000 140 56 0 1 140 1 140 2.00e-53 171
Msa0320140 MtrunA17_Chr2g0295091 53.333 150 56 1 141 276 8 157 6.05e-47 154
Msa0320140 MtrunA17_Chr2g0295104 63.077 130 48 0 1 130 1 130 7.44e-53 169
Msa0320140 MtrunA17_Chr2g0295104 53.333 150 56 1 141 276 8 157 7.93e-46 151
Msa0320140 MtrunA17_Chr2g0295081 59.712 139 56 0 1 139 1 139 9.82e-52 166
Msa0320140 MtrunA17_Chr2g0295081 52.703 148 56 1 143 276 10 157 1.69e-45 150
Msa0320140 MtrunA17_Chr2g0295124 60.000 140 56 0 1 140 1 140 2.39e-51 165
Msa0320140 MtrunA17_Chr2g0295124 54.667 150 54 1 141 276 8 157 1.02e-46 154
Msa0320140 MtrunA17_Chr2g0295211 41.304 138 80 1 1 137 1 138 2.00e-32 117
Msa0320140 MtrunA17_Chr2g0295211 35.570 149 81 2 141 274 8 156 1.85e-27 103
Msa0320140 MtrunA17_Chr4g0067841 41.304 138 80 1 1 137 1 138 2.13e-30 111
Msa0320140 MtrunA17_Chr4g0067841 34.459 148 82 2 142 274 9 156 8.08e-25 97.1
Msa0320140 MtrunA17_Chr4g0067921 46.094 128 63 4 1 125 1 125 6.84e-24 94.7
Msa0320140 MtrunA17_Chr4g0067921 40.397 151 75 4 142 277 9 159 1.37e-23 94.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 79 sgRNAs with CRISPR-Local

Find 283 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCAATAACCTTTGGAATA+AGG 0.200219 2_4:-20423874 None:intergenic
AACGAAAGTAAGTTTCTTGA+TGG 0.287513 2_4:-20423942 None:intergenic
AACGAAAGTGAGTTTCTTGA+TGG 0.319436 2_4:-20428143 None:intergenic
CCCTTGATTTCCTCTTCACT+TGG 0.329042 2_4:-20424443 None:intergenic
TTGATGACATCAACAACCTT+TGG 0.332899 2_4:-20428082 None:intergenic
GGCCCTTGAGGGTTACTGTT+TGG 0.340986 2_4:+20428741 Msa0320140:CDS
TATATGCTTTAGTTGTAATC+AGG 0.341112 2_4:-20428769 None:intergenic
CTTCAACAATTTCAATACTT+TGG 0.342783 2_4:-20423901 None:intergenic
GAGATCTTCTCCACTGTGTC+TGG 0.364866 2_4:-20424335 None:intergenic
AGTGAGTTTCTTGATGGTTC+CGG 0.364937 2_4:-20428137 None:intergenic
TGATGACATCAACAACCTTT+GGG 0.365094 2_4:-20428081 None:intergenic
AAGAAACTTACTTTCGTTGA+AGG 0.370871 2_4:+20423947 Msa0320140:CDS
AGTAAGTTTCTTGATGGTTC+CGG 0.371837 2_4:-20423936 None:intergenic
ACTTGGTAGATGATGCTAAC+TGG 0.375253 2_4:+20428521 Msa0320140:intron
AAGAAACTCACTTTCGTTGA+AGG 0.376358 2_4:+20428148 Msa0320140:CDS
GAAATCTTCTCTACTGTGTC+TGG 0.378194 2_4:-20428580 None:intergenic
CATCAACAACCTTTGGGATA+AGG 0.380175 2_4:-20428075 None:intergenic
AAAAGTATTGACATTGTTGA+AGG 0.419014 2_4:+20428103 Msa0320140:CDS
CAAAGTATTGAAATTGTTGA+AGG 0.421501 2_4:+20423902 Msa0320140:CDS
ATTGACATTGTTGAAGGAAA+TGG 0.422286 2_4:+20428109 Msa0320140:CDS
TGGATGGCATCAATAACCTT+TGG 0.428619 2_4:-20423881 None:intergenic
AACAATTTCAATACTTTGGA+TGG 0.439896 2_4:-20423897 None:intergenic
ATTGAAATTGTTGAAGGAAA+CGG 0.445615 2_4:+20423908 Msa0320140:CDS
AAATCAAGGGTGGCAAAGCT+AGG 0.448601 2_4:+20424456 Msa0320140:CDS
TTTGAGTCTAAATTGTCTGC+AGG 0.453113 2_4:+20424359 Msa0320140:CDS
TTTGCAATGGATCCTCCATC+TGG 0.453770 2_4:-20424383 None:intergenic
GCTTACAACTACAGCATAGT+TGG 0.463271 2_4:+20424299 Msa0320140:CDS
GCTTTAGTTGTAATCAGGAT+TGG 0.467799 2_4:-20428764 None:intergenic
ACATTAGTATTATATCATCA+TGG 0.474977 2_4:+20423769 Msa0320140:exon
CATGGGTGTATTCAACTTTG+AGG 0.475033 2_4:+20423787 Msa0320140:exon
TACAGCATAGTTGGTGGTGG+TGG 0.475041 2_4:+20424308 Msa0320140:CDS
AGAGCTTTGTAAAGTCTAGC+AGG 0.480944 2_4:-20423833 None:intergenic
GCTTACAACTACAGCATAGT+TGG 0.483791 2_4:+20428544 Msa0320140:CDS
AAAGCTTTGTGAAGTGTAGC+AGG 0.484835 2_4:-20428034 None:intergenic
TTTGAAGCTAAATTGTCTGC+AGG 0.489005 2_4:+20428604 Msa0320140:CDS
GGTGGCAAAGCTAGGGGTGA+TGG 0.489081 2_4:+20424464 Msa0320140:CDS
AATCAAGGGTGGCAAAGCTA+GGG 0.491277 2_4:+20424457 Msa0320140:CDS
TTTGCAATGGATCCTCCATT+CGG 0.495837 2_4:-20428628 None:intergenic
ACTGTGAAATACTTCACAAA+AGG 0.498744 2_4:+20424410 Msa0320140:CDS
ACCAAGTGAAGAGGAAATCA+AGG 0.498836 2_4:+20424442 Msa0320140:CDS
CTCTTGAGTTCCTCTTCACT+AGG 0.501934 2_4:-20428688 None:intergenic
ACTAGGAGTAGCATCACCTT+TGG 0.504856 2_4:-20428671 None:intergenic
GTTGAAGGAAATGGTGGCTC+CGG 0.506022 2_4:+20428118 Msa0320140:CDS
CTTGGTAGATGATGCTAACT+GGG 0.513123 2_4:+20428522 Msa0320140:intron
TTCTGATAACCTTATTCCAA+AGG 0.526563 2_4:+20423865 Msa0320140:CDS
AAAGTATGATTTGCACAAAG+TGG 0.527363 2_4:+20424253 Msa0320140:CDS
TTTCACAGTAAGCTTTGCAA+TGG 0.527944 2_4:-20424396 None:intergenic
GTTGAAGGAAACGGTGGTGC+CGG 0.528042 2_4:+20423917 Msa0320140:CDS
ACTCAAGAGTGGCAAAGCTA+AGG 0.529920 2_4:+20428702 Msa0320140:CDS
CTCAAGAGTGGCAAAGCTAA+GGG 0.532020 2_4:+20428703 Msa0320140:CDS
TTTCACACTAAGCTTTGCAA+TGG 0.532493 2_4:-20428641 None:intergenic
TGCAGACAATTTAGACTCAA+AGG 0.553148 2_4:-20424357 None:intergenic
AAATTGTCTGCAGGGCCAGA+TGG 0.558648 2_4:+20424368 Msa0320140:CDS
AAGTGTAGCAGGAGCTACAA+TGG 0.570662 2_4:-20428023 None:intergenic
CATTAGTATTATATCATCAT+GGG 0.574725 2_4:+20423770 Msa0320140:exon
TTGAGTCTAAATTGTCTGCA+GGG 0.579973 2_4:+20424360 Msa0320140:CDS
AAATTGTCTGCAGGTCCGAA+TGG 0.591580 2_4:+20428613 Msa0320140:CDS
AGTGGCAAAGCTAAGGGTGA+TGG 0.593000 2_4:+20428709 Msa0320140:CDS
AGCAGGAGCTACAATGGAGG+TGG 0.593310 2_4:-20428017 None:intergenic
TACAACTACAGCATAGTTGG+AGG 0.598501 2_4:+20428547 Msa0320140:CDS
TGATGCTGCACCAAGTGAAG+AGG 0.603594 2_4:+20424433 Msa0320140:CDS
TGGCCAAACAGTAACCCTCA+AGG 0.618520 2_4:-20428744 None:intergenic
TTGTCTGCAGGGCCAGATGG+AGG 0.618761 2_4:+20424371 Msa0320140:CDS
TACAACTACAGCATAGTTGG+TGG 0.619903 2_4:+20424302 Msa0320140:CDS
AACTACAGCATAGTTGGTGG+TGG 0.623337 2_4:+20424305 Msa0320140:CDS
TGCTGACAACCTTATCCCAA+AGG 0.624297 2_4:+20428066 Msa0320140:CDS
GGCCAAACAGTAACCCTCAA+GGG 0.627034 2_4:-20428743 None:intergenic
ATCAAGGGTGGCAAAGCTAG+GGG 0.634094 2_4:+20424458 Msa0320140:CDS
TGATGCTACTCCTAGTGAAG+AGG 0.634756 2_4:+20428678 Msa0320140:CDS
GACATTGTTGAAGGAAATGG+TGG 0.641583 2_4:+20428112 Msa0320140:CDS
AGCAGGAGCTACAATAGATG+TGG 0.641681 2_4:-20423816 None:intergenic
TTGTCTGCAGGTCCGAATGG+AGG 0.646240 2_4:+20428616 Msa0320140:CDS
AGTGTGAAATACTTCACCAA+AGG 0.651010 2_4:+20428655 Msa0320140:CDS
CCAAGTGAAGAGGAAATCAA+GGG 0.664848 2_4:+20424443 Msa0320140:CDS
AGTGAAGAGGAACTCAAGAG+TGG 0.684104 2_4:+20428691 Msa0320140:CDS
AGTGAAGAGGAAATCAAGGG+TGG 0.695634 2_4:+20424446 Msa0320140:CDS
TGTAGCAGGAGCTACAATGG+AGG 0.722910 2_4:-20428020 None:intergenic
GAAATTGTTGAAGGAAACGG+TGG 0.726108 2_4:+20423911 Msa0320140:CDS
TGGTGGACTTCCAGACACAG+TGG 0.739823 2_4:+20424325 Msa0320140:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATATAATAAAAGAAAAG+AGG - chr2_4:20424060-20424079 None:intergenic 10.0%
!!! TCTTTTCTTTTATTATATAT+TGG + chr2_4:20424059-20424078 Msa0320140:intron 10.0%
!! GTATTATTATAATTTATTGA+AGG - chr2_4:20424683-20424702 None:intergenic 10.0%
!!! TAAAAAAACTTTAAAGATAT+AGG - chr2_4:20425872-20425891 None:intergenic 10.0%
!!! TCTTTAAAGTTTTTTTATTT+TGG + chr2_4:20425875-20425894 Msa0320140:intron 10.0%
!!! ATAATAAACTTTAAAGATAT+AGG - chr2_4:20425977-20425996 None:intergenic 10.0%
!!! TTTAGAGTTAAATATATAAA+TGG - chr2_4:20426344-20426363 None:intergenic 10.0%
!!! TTTTGTTAGTATTATTTTAT+CGG + chr2_4:20427205-20427224 Msa0320140:intron 10.0%
!! ACTATAAGTAGTAAAATAAA+AGG + chr2_4:20425072-20425091 Msa0320140:intron 15.0%
!!! TTAAAGTTTTTTTATTTTGG+TGG + chr2_4:20425878-20425897 Msa0320140:intron 15.0%
!!! ATTCATTTTAGTCTTTATTT+TGG + chr2_4:20426125-20426144 Msa0320140:intron 15.0%
!!! AAATATTTTATTTTTGCGTT+TGG - chr2_4:20426254-20426273 None:intergenic 15.0%
!! TAAAAACAAAGTTATATCAA+TGG - chr2_4:20426629-20426648 None:intergenic 15.0%
!!! CATTTTGAAACAAATTTTTT+TGG - chr2_4:20427525-20427544 None:intergenic 15.0%
!! AGAAAAAATTATTATTGCAT+TGG - chr2_4:20427565-20427584 None:intergenic 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG - chr2_4:20427628-20427647 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG - chr2_4:20427652-20427671 None:intergenic 15.0%
!! AATAGTTAATAAGGATAATT+TGG + chr2_4:20427651-20427670 Msa0320140:intron 15.0%
!! AATCTTACTTATTAAGATTT+AGG + chr2_4:20428204-20428223 Msa0320140:intron 15.0%
!! ATCTTACTTATTAAGATTTA+GGG + chr2_4:20428205-20428224 Msa0320140:intron 15.0%
!!! TCATTTTCTCAAAATTTTAT+CGG + chr2_4:20428328-20428347 Msa0320140:intron 15.0%
!!! ATATTTAGGTTTTTAAAAGT+AGG - chr2_4:20428415-20428434 None:intergenic 15.0%
!! AACCTAAATATATTAAGTAA+TGG + chr2_4:20428424-20428443 Msa0320140:intron 15.0%
!! ACATTAGTATTATATCATCA+TGG + chr2_4:20423769-20423788 Msa0320140:exon 20.0%
!! CATTAGTATTATATCATCAT+GGG + chr2_4:20423770-20423789 Msa0320140:exon 20.0%
!! ATATATGTGAAAAATTGAAG+TGG + chr2_4:20423977-20423996 Msa0320140:intron 20.0%
!! TATTATAATTTATTGAAGGG+AGG - chr2_4:20424679-20424698 None:intergenic 20.0%
!!! TTATATGTGGTTTTCAAATT+TGG + chr2_4:20424754-20424773 Msa0320140:intron 20.0%
!!! TATATGTGGTTTTCAAATTT+GGG + chr2_4:20424755-20424774 Msa0320140:intron 20.0%
!!! GTAATTTTGTATTGGAAATT+TGG - chr2_4:20424837-20424856 None:intergenic 20.0%
!!! CTACATAAGTAATTTTGTAT+TGG - chr2_4:20424845-20424864 None:intergenic 20.0%
!! TAACAAATATAAAGAAACCA+TGG + chr2_4:20424871-20424890 Msa0320140:intron 20.0%
!!! TTACCTTTTTTTTTCTTTCA+CGG - chr2_4:20424981-20425000 None:intergenic 20.0%
!! ACAAATCTAAAAAACTCAAA+TGG + chr2_4:20425118-20425137 Msa0320140:intron 20.0%
!!! TGAAGGATATTTTATTTTGT+CGG + chr2_4:20425227-20425246 Msa0320140:intron 20.0%
!!! TAATTTTAGTCTTCGTATTT+TGG + chr2_4:20426056-20426075 Msa0320140:intron 20.0%
!! AAAGAAAAAAATTGTGAACT+TGG - chr2_4:20426512-20426531 None:intergenic 20.0%
!!! ATATTGAGTTTTAATGATGT+CGG - chr2_4:20426700-20426719 None:intergenic 20.0%
!! TGGATTATTAATTATCTTAG+TGG + chr2_4:20427129-20427148 Msa0320140:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG + chr2_4:20427642-20427661 Msa0320140:intron 20.0%
!!! CCATTTTTTTAATTCACATT+GGG - chr2_4:20427817-20427836 None:intergenic 20.0%
!!! TTATTAAGATTTAGGGTTTA+GGG + chr2_4:20428212-20428231 Msa0320140:intron 20.0%
!! GACCATTACTTAATATATTT+AGG - chr2_4:20428429-20428448 None:intergenic 20.0%
! AACAATTTCAATACTTTGGA+TGG - chr2_4:20423900-20423919 None:intergenic 25.0%
! CTTCAACAATTTCAATACTT+TGG - chr2_4:20423904-20423923 None:intergenic 25.0%
!!! CAAAGTATTGAAATTGTTGA+AGG + chr2_4:20423902-20423921 Msa0320140:CDS 25.0%
! ATTGAAATTGTTGAAGGAAA+CGG + chr2_4:20423908-20423927 Msa0320140:CDS 25.0%
! AACAAGAATCAAACATTTGA+TGG - chr2_4:20424020-20424039 None:intergenic 25.0%
! TTTCACAATTACTAACATGA+TGG - chr2_4:20424205-20424224 None:intergenic 25.0%
! TGCATGTAACTATTTATATG+TGG + chr2_4:20424741-20424760 Msa0320140:intron 25.0%
!! AATGGTTTAGAATAATAGAG+AGG - chr2_4:20424915-20424934 None:intergenic 25.0%
! ATACCGTGAAAGAAAAAAAA+AGG + chr2_4:20424975-20424994 Msa0320140:intron 25.0%
!! TCACAGATTTTACATTTTGA+AGG + chr2_4:20425004-20425023 Msa0320140:intron 25.0%
! TCTAAAAAACTCAAATGGTT+TGG + chr2_4:20425123-20425142 Msa0320140:intron 25.0%
!!! AAAATTGATTTCAAGTTCCT+AGG + chr2_4:20425588-20425607 Msa0320140:intron 25.0%
! AGTTATAACAAACCAAACTA+AGG - chr2_4:20425706-20425725 None:intergenic 25.0%
! GTTAACGCAACAAAAAAAAA+GGG + chr2_4:20425805-20425824 Msa0320140:intron 25.0%
! AACAAAAAAAAAGGGAAAGA+CGG + chr2_4:20425813-20425832 Msa0320140:intron 25.0%
!!! AAGTTTTTTTATTTTGGTGG+TGG + chr2_4:20425881-20425900 Msa0320140:intron 25.0%
! GACAATGCATAATATATGTA+AGG - chr2_4:20425926-20425945 None:intergenic 25.0%
! AATACGAAGACTAAAATTAG+TGG - chr2_4:20426055-20426074 None:intergenic 25.0%
! CAATATGATGAAAGATTGTA+AGG - chr2_4:20426088-20426107 None:intergenic 25.0%
! GGTCTTTATTGTTTATGTAA+GGG - chr2_4:20426233-20426252 None:intergenic 25.0%
! TGGTCTTTATTGTTTATGTA+AGG - chr2_4:20426234-20426253 None:intergenic 25.0%
! AGAGACTGCAATTATTTATT+TGG + chr2_4:20426376-20426395 Msa0320140:intron 25.0%
!! GGTGACTTTAATGTATTTTT+AGG - chr2_4:20426679-20426698 None:intergenic 25.0%
! AAATTCCACATAAAATGTGA+TGG + chr2_4:20426848-20426867 Msa0320140:intron 25.0%
!! TTTTTCTATTATCTCTCTCT+GGG + chr2_4:20427019-20427038 Msa0320140:intron 25.0%
! TATCTTAGTGGTTAACATAA+TGG + chr2_4:20427141-20427160 Msa0320140:intron 25.0%
! ATCTTAGTGGTTAACATAAT+GGG + chr2_4:20427142-20427161 Msa0320140:intron 25.0%
!!! TATTATTTTATCGGACTCTT+GGG + chr2_4:20427214-20427233 Msa0320140:intron 25.0%
! CCCAATGTGAATTAAAAAAA+TGG + chr2_4:20427814-20427833 Msa0320140:intron 25.0%
!!! GCCATTTTTTTAATTCACAT+TGG - chr2_4:20427818-20427837 None:intergenic 25.0%
! TGAATTAAAAAAATGGCCTA+AGG + chr2_4:20427821-20427840 Msa0320140:intron 25.0%
! ACTTGCATTATAATTCATCA+TGG + chr2_4:20427970-20427989 Msa0320140:intron 25.0%
! CTTGCATTATAATTCATCAT+GGG + chr2_4:20427971-20427990 Msa0320140:intron 25.0%
!!! AAAAGTATTGACATTGTTGA+AGG + chr2_4:20428103-20428122 Msa0320140:CDS 25.0%
!! CTTATTAAGATTTAGGGTTT+AGG + chr2_4:20428211-20428230 Msa0320140:intron 25.0%
TTCTGATAACCTTATTCCAA+AGG + chr2_4:20423865-20423884 Msa0320140:CDS 30.0%
!! CATCAATAACCTTTGGAATA+AGG - chr2_4:20423877-20423896 None:intergenic 30.0%
AACGAAAGTAAGTTTCTTGA+TGG - chr2_4:20423945-20423964 None:intergenic 30.0%
AAGAAACTTACTTTCGTTGA+AGG + chr2_4:20423947-20423966 Msa0320140:CDS 30.0%
! AAAGTATGATTTGCACAAAG+TGG + chr2_4:20424253-20424272 Msa0320140:CDS 30.0%
ACTGTGAAATACTTCACAAA+AGG + chr2_4:20424410-20424429 Msa0320140:CDS 30.0%
AGCTATATGCTTTAGTAATC+AGG - chr2_4:20424527-20424546 None:intergenic 30.0%
TATATCATGTGTGCTTGATT+TGG + chr2_4:20424595-20424614 Msa0320140:intron 30.0%
AAAAGGAAAGAGAGAATTAC+AGG - chr2_4:20424624-20424643 None:intergenic 30.0%
!!! AAACCATGGTTTTGTTTCAT+TGG + chr2_4:20424885-20424904 Msa0320140:intron 30.0%
!!! AACCATGGTTTTGTTTCATT+GGG + chr2_4:20424886-20424905 Msa0320140:intron 30.0%
! TCCTTCATGTTTCTACTAAT+GGG - chr2_4:20425214-20425233 None:intergenic 30.0%
! ATCCTTCATGTTTCTACTAA+TGG - chr2_4:20425215-20425234 None:intergenic 30.0%
AATGCAGGTTTATAACTGAT+TGG + chr2_4:20425260-20425279 Msa0320140:intron 30.0%
ACAAATAAGATGAGAGTTAG+AGG + chr2_4:20425351-20425370 Msa0320140:intron 30.0%
TAAAACACTCAAAACACCTA+TGG - chr2_4:20425457-20425476 None:intergenic 30.0%
!! GTTTTGAGTGTTTTATAGTG+AGG + chr2_4:20425462-20425481 Msa0320140:intron 30.0%
GATGAAGAATTAGAGATCAA+GGG + chr2_4:20425529-20425548 Msa0320140:intron 30.0%
CGTTAACGCAACAAAAAAAA+AGG + chr2_4:20425804-20425823 Msa0320140:intron 30.0%
TGCATAATATATGTAAGGTC+CGG - chr2_4:20425921-20425940 None:intergenic 30.0%
TGAGCTTAACTAAGTTGTTA+TGG - chr2_4:20425948-20425967 None:intergenic 30.0%
! CAATTCCATCACATTTTATG+TGG - chr2_4:20426856-20426875 None:intergenic 30.0%
! CACATAAAATGTGATGGAAT+TGG + chr2_4:20426854-20426873 Msa0320140:intron 30.0%
AGACAAAAAGAGAGGAAAAA+GGG + chr2_4:20426950-20426969 Msa0320140:intron 30.0%
AGAGATAATAGAAAAAGGAC+TGG - chr2_4:20427015-20427034 None:intergenic 30.0%
CAGAGAGAGATAATAGAAAA+AGG - chr2_4:20427020-20427039 None:intergenic 30.0%
! CTTTTTCTATTATCTCTCTC+TGG + chr2_4:20427018-20427037 Msa0320140:intron 30.0%
! TTGAAATAAGCATTGTCTTC+AGG - chr2_4:20427061-20427080 None:intergenic 30.0%
!! GTATTATTTTATCGGACTCT+TGG + chr2_4:20427213-20427232 Msa0320140:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG - chr2_4:20427499-20427518 None:intergenic 30.0%
TGTGCATAGTATTAATTGGA+GGG - chr2_4:20427599-20427618 None:intergenic 30.0%
GTAGTGTGCATAGTATTAAT+TGG - chr2_4:20427603-20427622 None:intergenic 30.0%
TTCACATTGGGATATGAATT+TGG - chr2_4:20427805-20427824 None:intergenic 30.0%
GGAAAATGATGAATAATTCC+AGG - chr2_4:20427848-20427867 None:intergenic 30.0%
ATAGGAACTGAAGATGTTAT+TGG - chr2_4:20427884-20427903 None:intergenic 30.0%
AAGTTGAGCATGGTATTTAT+AGG - chr2_4:20427902-20427921 None:intergenic 30.0%
TTTATTAGTGAAGTTGAGCA+TGG - chr2_4:20427912-20427931 None:intergenic 30.0%
ATTGACATTGTTGAAGGAAA+TGG + chr2_4:20428109-20428128 Msa0320140:CDS 30.0%
! TTGTCTAAAACTATGAAGCA+CGG - chr2_4:20428383-20428402 None:intergenic 30.0%
CACTTTGTGTAAATCATACT+TGG - chr2_4:20428500-20428519 None:intergenic 30.0%
CAAGTATGATTTACACAAAG+TGG + chr2_4:20428498-20428517 Msa0320140:intron 30.0%
! AGTAAGTTTCTTGATGGTTC+CGG - chr2_4:20423939-20423958 None:intergenic 35.0%
ATGTGAAAAATTGAAGTGGC+AGG + chr2_4:20423981-20424000 Msa0320140:intron 35.0%
!! TAACATGATGGACATTCACT+TGG - chr2_4:20424193-20424212 None:intergenic 35.0%
GAAACGAATCAATTATGTGC+AGG + chr2_4:20424221-20424240 Msa0320140:intron 35.0%
TGCAGACAATTTAGACTCAA+AGG - chr2_4:20424360-20424379 None:intergenic 35.0%
TTTGAGTCTAAATTGTCTGC+AGG + chr2_4:20424359-20424378 Msa0320140:CDS 35.0%
TTGAGTCTAAATTGTCTGCA+GGG + chr2_4:20424360-20424379 Msa0320140:CDS 35.0%
TTTCACAGTAAGCTTTGCAA+TGG - chr2_4:20424399-20424418 None:intergenic 35.0%
TTGCTTGCTTGCTTTATACA+TGG + chr2_4:20424549-20424568 Msa0320140:intron 35.0%
AACCCAATGAAACAAAACCA+TGG - chr2_4:20424891-20424910 None:intergenic 35.0%
!! AAAGACAACCTGAAAGCATT+AGG + chr2_4:20425154-20425173 Msa0320140:intron 35.0%
! AAAGCATTAGGAATGGTTGT+GGG + chr2_4:20425166-20425185 Msa0320140:intron 35.0%
! TGTTTCTACTAATGGGTGTT+AGG - chr2_4:20425207-20425226 None:intergenic 35.0%
ACCCATTAGTAGAAACATGA+AGG + chr2_4:20425210-20425229 Msa0320140:intron 35.0%
!! GTCGGTTACAATTTTAATGC+AGG + chr2_4:20425245-20425264 Msa0320140:intron 35.0%
CAGGTTTATAACTGATTGGT+TGG + chr2_4:20425264-20425283 Msa0320140:intron 35.0%
AGACATCATGTGAATGATCA+AGG + chr2_4:20425507-20425526 Msa0320140:intron 35.0%
GGATGAAGAATTAGAGATCA+AGG + chr2_4:20425528-20425547 Msa0320140:intron 35.0%
AGAGATCAAGGGTTCTTAAA+AGG + chr2_4:20425540-20425559 Msa0320140:intron 35.0%
!!! TTTTTTATTTTGGTGGTGGC+CGG + chr2_4:20425885-20425904 Msa0320140:intron 35.0%
CATAATATATGTAAGGTCCG+GGG - chr2_4:20425919-20425938 None:intergenic 35.0%
GCATAATATATGTAAGGTCC+GGG - chr2_4:20425920-20425939 None:intergenic 35.0%
AATGAGAAGTTACTCCATGT+TGG - chr2_4:20426415-20426434 None:intergenic 35.0%
ACATGGAGTAACTTCTCATT+TGG + chr2_4:20426415-20426434 Msa0320140:intron 35.0%
GAACTTGGCTAAAATTGAGT+TGG - chr2_4:20426497-20426516 None:intergenic 35.0%
AGACGTTGGATTTAATCCAA+TGG + chr2_4:20426924-20426943 Msa0320140:intron 35.0%
GAGACAAAAAGAGAGGAAAA+AGG + chr2_4:20426949-20426968 Msa0320140:intron 35.0%
GACAAAAAGAGAGGAAAAAG+GGG + chr2_4:20426951-20426970 Msa0320140:intron 35.0%
ATCAAACCACAATGCTACAA+CGG + chr2_4:20427096-20427115 Msa0320140:intron 35.0%
! TAGTGGTTAACATAATGGGA+CGG + chr2_4:20427146-20427165 Msa0320140:intron 35.0%
TATGCTAACAAGTGCTCTAA+GGG - chr2_4:20427400-20427419 None:intergenic 35.0%
TTATGCTAACAAGTGCTCTA+AGG - chr2_4:20427401-20427420 None:intergenic 35.0%
GTGTGCATAGTATTAATTGG+AGG - chr2_4:20427600-20427619 None:intergenic 35.0%
!! TTCAAAATGAGTGTCGCTTT+AGG - chr2_4:20427733-20427752 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr2_4:20427734-20427753 Msa0320140:intron 35.0%
ATGAATAATTCCAGGTCCTT+AGG - chr2_4:20427840-20427859 None:intergenic 35.0%
GAACTGAAGATGTTATTGGA+TGG - chr2_4:20427880-20427899 None:intergenic 35.0%
TTCACTAATAAACCACAGCT+AGG + chr2_4:20427920-20427939 Msa0320140:intron 35.0%
TGATGACATCAACAACCTTT+GGG - chr2_4:20428084-20428103 None:intergenic 35.0%
! TTGATGACATCAACAACCTT+TGG - chr2_4:20428085-20428104 None:intergenic 35.0%
AACGAAAGTGAGTTTCTTGA+TGG - chr2_4:20428146-20428165 None:intergenic 35.0%
AAGAAACTCACTTTCGTTGA+AGG + chr2_4:20428148-20428167 Msa0320140:CDS 35.0%
ATGAATCTATGACATGCAGA+TGG + chr2_4:20428469-20428488 Msa0320140:intron 35.0%
! TGATTTACACAAAGTGGACT+TGG + chr2_4:20428504-20428523 Msa0320140:intron 35.0%
! TTTGAAGCTAAATTGTCTGC+AGG + chr2_4:20428604-20428623 Msa0320140:CDS 35.0%
TTTCACACTAAGCTTTGCAA+TGG - chr2_4:20428644-20428663 None:intergenic 35.0%
AGTGTGAAATACTTCACCAA+AGG + chr2_4:20428655-20428674 Msa0320140:CDS 35.0%
CATGGGTGTATTCAACTTTG+AGG + chr2_4:20423787-20423806 Msa0320140:exon 40.0%
! AGAGCTTTGTAAAGTCTAGC+AGG - chr2_4:20423836-20423855 None:intergenic 40.0%
TGGATGGCATCAATAACCTT+TGG - chr2_4:20423884-20423903 None:intergenic 40.0%
GAAATTGTTGAAGGAAACGG+TGG + chr2_4:20423911-20423930 Msa0320140:CDS 40.0%
GACATTCACTTGGTTCAACT+AGG - chr2_4:20424183-20424202 None:intergenic 40.0%
ACGAATCAATTATGTGCAGG+TGG + chr2_4:20424224-20424243 Msa0320140:intron 40.0%
GCTTACAACTACAGCATAGT+TGG + chr2_4:20424299-20424318 Msa0320140:CDS 40.0%
TACAACTACAGCATAGTTGG+TGG + chr2_4:20424302-20424321 Msa0320140:CDS 40.0%
ACCAAGTGAAGAGGAAATCA+AGG + chr2_4:20424442-20424461 Msa0320140:CDS 40.0%
CCAAGTGAAGAGGAAATCAA+GGG + chr2_4:20424443-20424462 Msa0320140:CDS 40.0%
CAATCTCACACTTGAGCAAA+AGG - chr2_4:20424641-20424660 None:intergenic 40.0%
! CTGATTTGTGCTTCTTGCAA+TGG - chr2_4:20424933-20424952 None:intergenic 40.0%
!! CAACCTGAAAGCATTAGGAA+TGG + chr2_4:20425159-20425178 Msa0320140:intron 40.0%
CAACCATTCCTAATGCTTTC+AGG - chr2_4:20425165-20425184 None:intergenic 40.0%
!! GAAAGCATTAGGAATGGTTG+TGG + chr2_4:20425165-20425184 Msa0320140:intron 40.0%
! TCAAGTTCCTAGGAGTTTTC+AGG + chr2_4:20425598-20425617 Msa0320140:intron 40.0%
TCTTTCACCTGAAAACTCCT+AGG - chr2_4:20425608-20425627 None:intergenic 40.0%
AACGTAAGAAATCGCACATG+AGG + chr2_4:20425648-20425667 Msa0320140:intron 40.0%
ACGTAAGAAATCGCACATGA+GGG + chr2_4:20425649-20425668 Msa0320140:intron 40.0%
ACCAAACTAAGGACACTTTC+AGG - chr2_4:20425695-20425714 None:intergenic 40.0%
GTTAACACTAGCGAAAAGAC+GGG - chr2_4:20425850-20425869 None:intergenic 40.0%
GGTTAACACTAGCGAAAAGA+CGG - chr2_4:20425851-20425870 None:intergenic 40.0%
!!! TTTTTATTTTGGTGGTGGCC+GGG + chr2_4:20425886-20425905 Msa0320140:intron 40.0%
GTCAAAGCTGAATACCAACA+TGG + chr2_4:20426398-20426417 Msa0320140:intron 40.0%
CGTTGGATTTAATCCAATGG+TGG + chr2_4:20426927-20426946 Msa0320140:intron 40.0%
! TCTCTTTTTGTCTCCACCAT+TGG - chr2_4:20426943-20426962 None:intergenic 40.0%
! AATGGTGGAGACAAAAAGAG+AGG + chr2_4:20426942-20426961 Msa0320140:intron 40.0%
! GCTACAACGGACATACATTT+TGG + chr2_4:20427109-20427128 Msa0320140:intron 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr2_4:20427738-20427757 None:intergenic 40.0%
!!! TGACACTCATTTTGAAACGG+AGG - chr2_4:20427496-20427515 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+TGG + chr2_4:20427738-20427757 Msa0320140:intron 40.0%
AAAAAAATGGCCTAAGGACC+TGG + chr2_4:20427827-20427846 Msa0320140:intron 40.0%
! TTAAGTTGTTTGCCTAGCTG+TGG - chr2_4:20427935-20427954 None:intergenic 40.0%
!! CATGGGTGTCATCAATTTTG+AGG + chr2_4:20427988-20428007 Msa0320140:intron 40.0%
! AAAGCTTTGTGAAGTGTAGC+AGG - chr2_4:20428037-20428056 None:intergenic 40.0%
!! CATCAACAACCTTTGGGATA+AGG - chr2_4:20428078-20428097 None:intergenic 40.0%
GACATTGTTGAAGGAAATGG+TGG + chr2_4:20428112-20428131 Msa0320140:CDS 40.0%
! AGTGAGTTTCTTGATGGTTC+CGG - chr2_4:20428140-20428159 None:intergenic 40.0%
ACTTGGTAGATGATGCTAAC+TGG + chr2_4:20428521-20428540 Msa0320140:intron 40.0%
CTTGGTAGATGATGCTAACT+GGG + chr2_4:20428522-20428541 Msa0320140:intron 40.0%
GCTTACAACTACAGCATAGT+TGG + chr2_4:20424299-20424318 Msa0320140:CDS 40.0%
TACAACTACAGCATAGTTGG+AGG + chr2_4:20424302-20424321 Msa0320140:CDS 40.0%
GAAATCTTCTCTACTGTGTC+TGG - chr2_4:20428583-20428602 None:intergenic 40.0%
TTTGCAATGGATCCTCCATT+CGG - chr2_4:20428631-20428650 None:intergenic 40.0%
!! TAAGGGTGATGGTCTTTTCA+AGG + chr2_4:20428720-20428739 Msa0320140:CDS 40.0%
AGCAGGAGCTACAATAGATG+TGG - chr2_4:20423819-20423838 None:intergenic 45.0%
!! AACTACAGCATAGTTGGTGG+TGG + chr2_4:20424305-20424324 Msa0320140:CDS 45.0%
TTTGCAATGGATCCTCCATC+TGG - chr2_4:20424386-20424405 None:intergenic 45.0%
CCCTTGATTTCCTCTTCACT+TGG - chr2_4:20424446-20424465 None:intergenic 45.0%
AGTGAAGAGGAAATCAAGGG+TGG + chr2_4:20424446-20424465 Msa0320140:CDS 45.0%
AAATCAAGGGTGGCAAAGCT+AGG + chr2_4:20424456-20424475 Msa0320140:CDS 45.0%
AATCAAGGGTGGCAAAGCTA+GGG + chr2_4:20424457-20424476 Msa0320140:CDS 45.0%
!! TAGGGGTGATGGTCTTTTCA+AGG + chr2_4:20424475-20424494 Msa0320140:intron 45.0%
!! GGTCTTTTCAAGGCTCTTGA+AGG + chr2_4:20424485-20424504 Msa0320140:intron 45.0%
! GGCTCTTGAAGGTTACGTTT+TGG + chr2_4:20424496-20424515 Msa0320140:intron 45.0%
AGGAATGGTTGTGGGAATTG+TGG + chr2_4:20425174-20425193 Msa0320140:intron 45.0%
CCTATGGAGTTGCATGATCT+TGG - chr2_4:20425441-20425460 None:intergenic 45.0%
CCAAGATCATGCAACTCCAT+AGG + chr2_4:20425438-20425457 Msa0320140:intron 45.0%
CGTAAGAAATCGCACATGAG+GGG + chr2_4:20425650-20425669 Msa0320140:intron 45.0%
TAAGGACACTTTCAGGCGTA+GGG - chr2_4:20425688-20425707 None:intergenic 45.0%
!! GCCTGAAAGTGTCCTTAGTT+TGG + chr2_4:20425691-20425710 Msa0320140:intron 45.0%
!!! TTTTATTTTGGTGGTGGCCG+GGG + chr2_4:20425887-20425906 Msa0320140:intron 45.0%
AAAGAGAGGAAAAAGGGGCA+AGG + chr2_4:20426956-20426975 Msa0320140:intron 45.0%
AGGACTGGAAATTGCTCCAA+AGG - chr2_4:20427000-20427019 None:intergenic 45.0%
GTATGTCCGTTGTAGCATTG+TGG - chr2_4:20427105-20427124 None:intergenic 45.0%
!! CTAACAAGTGCTCTAAGGGA+GGG - chr2_4:20427396-20427415 None:intergenic 45.0%
GTTATTGGATGGCACGTTAG+AGG - chr2_4:20427869-20427888 None:intergenic 45.0%
AAGTGTAGCAGGAGCTACAA+TGG - chr2_4:20428026-20428045 None:intergenic 45.0%
TGCTGACAACCTTATCCCAA+AGG + chr2_4:20428066-20428085 Msa0320140:CDS 45.0%
! TTGTGTCGATGTCGAATGTC+AGG - chr2_4:20428284-20428303 None:intergenic 45.0%
TGATGTGTCCGTGTTGTGAT+TGG + chr2_4:20428354-20428373 Msa0320140:intron 45.0%
AAATTGTCTGCAGGTCCGAA+TGG + chr2_4:20428613-20428632 Msa0320140:CDS 45.0%
ACTAGGAGTAGCATCACCTT+TGG - chr2_4:20428674-20428693 None:intergenic 45.0%
TGATGCTACTCCTAGTGAAG+AGG + chr2_4:20428678-20428697 Msa0320140:CDS 45.0%
CTCTTGAGTTCCTCTTCACT+AGG - chr2_4:20428691-20428710 None:intergenic 45.0%
AGTGAAGAGGAACTCAAGAG+TGG + chr2_4:20428691-20428710 Msa0320140:CDS 45.0%
ACTCAAGAGTGGCAAAGCTA+AGG + chr2_4:20428702-20428721 Msa0320140:CDS 45.0%
CTCAAGAGTGGCAAAGCTAA+GGG + chr2_4:20428703-20428722 Msa0320140:CDS 45.0%
!! TATTATTATAATTTATTGAA+GGG - chr2_4:20424682-20424701 None:intergenic 5.0%
!!! TTTTAAAAAATTAAATTACA+CGG - chr2_4:20426028-20426047 None:intergenic 5.0%
!! TACAGCATAGTTGGTGGTGG+TGG + chr2_4:20424308-20424327 Msa0320140:CDS 50.0%
GAGATCTTCTCCACTGTGTC+TGG - chr2_4:20424338-20424357 None:intergenic 50.0%
AAATTGTCTGCAGGGCCAGA+TGG + chr2_4:20424368-20424387 Msa0320140:CDS 50.0%
TGATGCTGCACCAAGTGAAG+AGG + chr2_4:20424433-20424452 Msa0320140:CDS 50.0%
ATCAAGGGTGGCAAAGCTAG+GGG + chr2_4:20424458-20424477 Msa0320140:CDS 50.0%
CTAAGGACACTTTCAGGCGT+AGG - chr2_4:20425689-20425708 None:intergenic 50.0%
TCATAACTGCGCAGGAGAGA+TGG - chr2_4:20426905-20426924 None:intergenic 50.0%
AGGAAAAAGGGGCAAGGAGA+GGG + chr2_4:20426962-20426981 Msa0320140:intron 50.0%
AGGGAAATGTCCACTGCCTT+TGG + chr2_4:20426981-20427000 Msa0320140:intron 50.0%
GGAAATTGCTCCAAAGGCAG+TGG - chr2_4:20426994-20427013 None:intergenic 50.0%
!! GCTAACAAGTGCTCTAAGGG+AGG - chr2_4:20427397-20427416 None:intergenic 50.0%
TGTAGCAGGAGCTACAATGG+AGG - chr2_4:20428023-20428042 None:intergenic 50.0%
GTTGAAGGAAATGGTGGCTC+CGG + chr2_4:20428118-20428137 Msa0320140:CDS 50.0%
!! CAGAAGTGTCGGTGCAACTT+AGG - chr2_4:20428248-20428267 None:intergenic 50.0%
! GCACCGACACTTCTGATTGA+CGG + chr2_4:20428253-20428272 Msa0320140:intron 50.0%
! GCACCGTCAATCAGAAGTGT+CGG - chr2_4:20428259-20428278 None:intergenic 50.0%
CACGGACACCAATCACAACA+CGG - chr2_4:20428365-20428384 None:intergenic 50.0%
AGTGGCAAAGCTAAGGGTGA+TGG + chr2_4:20428709-20428728 Msa0320140:CDS 50.0%
!! TGGTCTTTTCAAGGCCCTTG+AGG + chr2_4:20428729-20428748 Msa0320140:CDS 50.0%
!! GGTCTTTTCAAGGCCCTTGA+GGG + chr2_4:20428730-20428749 Msa0320140:CDS 50.0%
GGCCAAACAGTAACCCTCAA+GGG - chr2_4:20428746-20428765 None:intergenic 50.0%
TGGCCAAACAGTAACCCTCA+AGG - chr2_4:20428747-20428766 None:intergenic 50.0%
GTTGAAGGAAACGGTGGTGC+CGG + chr2_4:20423917-20423936 Msa0320140:CDS 55.0%
!! TGGTGGACTTCCAGACACAG+TGG + chr2_4:20424325-20424344 Msa0320140:CDS 55.0%
GGCAGTAGAGAAGCAGCATG+AGG - chr2_4:20426884-20426903 None:intergenic 55.0%
CCAACGTCTCATAACTGCGC+AGG - chr2_4:20426913-20426932 None:intergenic 55.0%
CCTGCGCAGTTATGAGACGT+TGG + chr2_4:20426910-20426929 Msa0320140:intron 55.0%
GAGGAAAAAGGGGCAAGGAG+AGG + chr2_4:20426961-20426980 Msa0320140:intron 55.0%
AGCAGGAGCTACAATGGAGG+TGG - chr2_4:20428020-20428039 None:intergenic 55.0%
TTGTCTGCAGGTCCGAATGG+AGG + chr2_4:20428616-20428635 Msa0320140:CDS 55.0%
GGCCCTTGAGGGTTACTGTT+TGG + chr2_4:20428741-20428760 Msa0320140:CDS 55.0%
TTGTCTGCAGGGCCAGATGG+AGG + chr2_4:20424371-20424390 Msa0320140:CDS 60.0%
GGTGGCAAAGCTAGGGGTGA+TGG + chr2_4:20424464-20424483 Msa0320140:CDS 60.0%
TTTCAGGCGTAGGGAGCCAG+AGG - chr2_4:20425679-20425698 None:intergenic 60.0%
AAGGTCCGGGGTTTGAACCC+CGG - chr2_4:20425907-20425926 None:intergenic 60.0%
CGCACATGAGGGGTTGCCTC+TGG + chr2_4:20425660-20425679 Msa0320140:intron 65.0%
GGTGGCCGGGGTTCAAACCC+CGG + chr2_4:20425899-20425918 Msa0320140:intron 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 20423739 20428783 20423739 ID=Msa0320140;Name=Msa0320140
chr2_4 mRNA 20423739 20428783 20423739 ID=Msa0320140-mRNA-1;Parent=Msa0320140;Name=Msa0320140-mRNA-1;_AED=0.18;_eAED=0.18;_QI=49|0.33|0.25|1|0.33|0.25|4|0|277
chr2_4 exon 20423739 20423968 20423739 ID=Msa0320140-mRNA-1:exon:7521;Parent=Msa0320140-mRNA-1
chr2_4 exon 20424243 20424485 20424243 ID=Msa0320140-mRNA-1:exon:7522;Parent=Msa0320140-mRNA-1
chr2_4 exon 20428014 20428169 20428014 ID=Msa0320140-mRNA-1:exon:7523;Parent=Msa0320140-mRNA-1
chr2_4 exon 20428530 20428783 20428530 ID=Msa0320140-mRNA-1:exon:7524;Parent=Msa0320140-mRNA-1
chr2_4 five_prime_UTR 20423739 20423787 20423739 ID=Msa0320140-mRNA-1:five_prime_utr;Parent=Msa0320140-mRNA-1
chr2_4 CDS 20423788 20423968 20423788 ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1
chr2_4 CDS 20424243 20424485 20424243 ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1
chr2_4 CDS 20428014 20428169 20428014 ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1
chr2_4 CDS 20428530 20428783 20428530 ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1
Gene Sequence

>Msa0320140

ATGGGTGTATTCAACTTTGAGGATGAGACCACATCTATTGTAGCTCCTGCTAGACTTTACAAAGCTCTAGTTACAGATTCTGATAACCTTATTCCAAAGGTTATTGATGCCATCCAAAGTATTGAAATTGTTGAAGGAAACGGTGGTGCCGGAACCATCAAGAAACTTACTTTCGTTGAAGGTGGTGAAACAAAGTATGATTTGCACAAAGTGGACTTAGTAGATGATGTTAACTTCGCTTACAACTACAGCATAGTTGGTGGTGGTGGACTTCCAGACACAGTGGAGAAGATCTCCTTTGAGTCTAAATTGTCTGCAGGGCCAGATGGAGGATCCATTGCAAAGCTTACTGTGAAATACTTCACAAAAGGTGATGCTGCACCAAGTGAAGAGGAAATCAAGGGTGGCAAAGCTAGGGGTGATGAAACCACCTCCATTGTAGCTCCTGCTACACTTCACAAAGCTTTTGTTACAGATGCTGACAACCTTATCCCAAAGGTTGTTGATGTCATCAAAAGTATTGACATTGTTGAAGGAAATGGTGGCTCCGGAACCATCAAGAAACTCACTTTCGTTGAAGATGATGCTAACTGGGCTTACAACTACAGCATAGTTGGAGGTGATAGTCTTCCAGACACAGTAGAGAAGATTTCATTTGAAGCTAAATTGTCTGCAGGTCCGAATGGAGGATCCATTGCAAAGCTTAGTGTGAAATACTTCACCAAAGGTGATGCTACTCCTAGTGAAGAGGAACTCAAGAGTGGCAAAGCTAAGGGTGATGGTCTTTTCAAGGCCCTTGAGGGTTACTGTTTGGCCAATCCTGATTACAACTAA

Protein sequence

>Msa0320140

MGVFNFEDETTSIVAPARLYKALVTDSDNLIPKVIDAIQSIEIVEGNGGAGTIKKLTFVEGGETKYDLHKVDLVDDVNFAYNYSIVGGGGLPDTVEKISFESKLSAGPDGGSIAKLTVKYFTKGDAAPSEEEIKGGKARGDETTSIVAPATLHKAFVTDADNLIPKVVDVIKSIDIVEGNGGSGTIKKLTFVEDDANWAYNYSIVGGDSLPDTVEKISFEAKLSAGPNGGSIAKLSVKYFTKGDATPSEEELKSGKAKGDGLFKALEGYCLANPDYN*