Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320140 | XP_003594829.2 | 80.696 | 316 | 21 | 2 | 1 | 276 | 1 | 316 | 1.20e-169 | 482 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320140 | sp|P93333|PR101_MEDTR | 100.000 | 141 | 0 | 0 | 1 | 141 | 1 | 141 | 1.59e-94 | 278 |
Msa0320140 | sp|P93333|PR101_MEDTR | 76.667 | 150 | 21 | 1 | 141 | 276 | 8 | 157 | 3.29e-73 | 224 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0004940 | Msa0320140 | 0.843130 | 1.693506e-58 | -8.615850e-47 |
Msa0004990 | Msa0320140 | 0.820208 | 7.745090e-53 | -8.615850e-47 |
Msa0011010 | Msa0320140 | 0.818150 | 2.278059e-52 | -8.615850e-47 |
Msa0011040 | Msa0320140 | 0.823217 | 1.559829e-53 | -8.615850e-47 |
Msa0014280 | Msa0320140 | 0.830544 | 2.767037e-55 | -8.615850e-47 |
Msa0016830 | Msa0320140 | -0.804120 | 2.516186e-49 | -8.615850e-47 |
Msa0031410 | Msa0320140 | 0.812554 | 3.998274e-51 | -8.615850e-47 |
Msa0031650 | Msa0320140 | 0.819259 | 1.275977e-52 | -8.615850e-47 |
Msa0034800 | Msa0320140 | -0.819827 | 9.464566e-53 | -8.615850e-47 |
Msa0046680 | Msa0320140 | 0.819102 | 1.384912e-52 | -8.615850e-47 |
Msa0048380 | Msa0320140 | 0.832114 | 1.136809e-55 | -8.615850e-47 |
Msa0053040 | Msa0320140 | 0.825985 | 3.477777e-54 | -8.615850e-47 |
Msa0059880 | Msa0320140 | 0.802064 | 6.697093e-49 | -8.615850e-47 |
Msa0064990 | Msa0320140 | 0.800992 | 1.111122e-48 | -8.615850e-47 |
Msa0083200 | Msa0320140 | -0.812031 | 5.202767e-51 | -8.615850e-47 |
Msa0093530 | Msa0320140 | 0.843149 | 1.673226e-58 | -8.615850e-47 |
Msa0098380 | Msa0320140 | 0.856485 | 3.117461e-62 | -8.615850e-47 |
Msa0107830 | Msa0320140 | 0.861693 | 8.577469e-64 | -8.615850e-47 |
Msa0117650 | Msa0320140 | 0.833344 | 5.628654e-56 | -8.615850e-47 |
Msa0126430 | Msa0320140 | 0.835214 | 1.911433e-56 | -8.615850e-47 |
Msa0126960 | Msa0320140 | 0.839376 | 1.644508e-57 | -8.615850e-47 |
Msa0129290 | Msa0320140 | 0.884935 | 1.253023e-71 | -8.615850e-47 |
Msa0143640 | Msa0320140 | 0.817971 | 2.500392e-52 | -8.615850e-47 |
Msa0143830 | Msa0320140 | 0.811597 | 6.464756e-51 | -8.615850e-47 |
Msa0150910 | Msa0320140 | 0.808868 | 2.507046e-50 | -8.615850e-47 |
Msa0163690 | Msa0320140 | 0.804240 | 2.374902e-49 | -8.615850e-47 |
Msa0164350 | Msa0320140 | 0.803587 | 3.247203e-49 | -8.615850e-47 |
Msa0164560 | Msa0320140 | 0.803882 | 2.819367e-49 | -8.615850e-47 |
Msa0171740 | Msa0320140 | 0.824942 | 6.139168e-54 | -8.615850e-47 |
Msa0183960 | Msa0320140 | -0.820328 | 7.269439e-53 | -8.615850e-47 |
Msa0185040 | Msa0320140 | 0.825427 | 4.716374e-54 | -8.615850e-47 |
Msa0193950 | Msa0320140 | 0.809302 | 2.023346e-50 | -8.615850e-47 |
Msa0196420 | Msa0320140 | 0.803938 | 2.745265e-49 | -8.615850e-47 |
Msa0199440 | Msa0320140 | 0.821404 | 4.111558e-53 | -8.615850e-47 |
Msa0199860 | Msa0320140 | 0.800488 | 1.407709e-48 | -8.615850e-47 |
Msa0200080 | Msa0320140 | 0.840785 | 7.054596e-58 | -8.615850e-47 |
Msa0200090 | Msa0320140 | 0.894726 | 1.880726e-75 | -8.615850e-47 |
Msa0207930 | Msa0320140 | 0.827698 | 1.355309e-54 | -8.615850e-47 |
Msa0207970 | Msa0320140 | 0.827159 | 1.824541e-54 | -8.615850e-47 |
Msa0214630 | Msa0320140 | 0.809543 | 1.796516e-50 | -8.615850e-47 |
Msa0219720 | Msa0320140 | -0.807102 | 5.955414e-50 | -8.615850e-47 |
Msa0238330 | Msa0320140 | 0.824638 | 7.240481e-54 | -8.615850e-47 |
Msa0240460 | Msa0320140 | -0.801337 | 9.441343e-49 | -8.615850e-47 |
Msa0242710 | Msa0320140 | 0.818731 | 1.682066e-52 | -8.615850e-47 |
Msa0242720 | Msa0320140 | 0.857344 | 1.739622e-62 | -8.615850e-47 |
Msa0248320 | Msa0320140 | 0.829885 | 4.006307e-55 | -8.615850e-47 |
Msa0255010 | Msa0320140 | 0.807543 | 4.801207e-50 | -8.615850e-47 |
Msa0257760 | Msa0320140 | 0.821450 | 4.011815e-53 | -8.615850e-47 |
Msa0258740 | Msa0320140 | 0.807125 | 5.888302e-50 | -8.615850e-47 |
Msa0261020 | Msa0320140 | -0.818605 | 1.796070e-52 | -8.615850e-47 |
Msa0267700 | Msa0320140 | 0.826094 | 3.276098e-54 | -8.615850e-47 |
Msa0269710 | Msa0320140 | 0.811700 | 6.139183e-51 | -8.615850e-47 |
Msa0271700 | Msa0320140 | 0.867061 | 1.805971e-65 | -8.615850e-47 |
Msa0271720 | Msa0320140 | 0.860530 | 1.936534e-63 | -8.615850e-47 |
Msa0275730 | Msa0320140 | 0.834670 | 2.621301e-56 | -8.615850e-47 |
Msa0280160 | Msa0320140 | 0.827295 | 1.693215e-54 | -8.615850e-47 |
Msa0280930 | Msa0320140 | 0.821142 | 4.723776e-53 | -8.615850e-47 |
Msa0280940 | Msa0320140 | 0.800536 | 1.376151e-48 | -8.615850e-47 |
Msa0281000 | Msa0320140 | 0.808275 | 3.355252e-50 | -8.615850e-47 |
Msa0285580 | Msa0320140 | 0.801045 | 1.083601e-48 | -8.615850e-47 |
Msa0285890 | Msa0320140 | 0.802432 | 5.626149e-49 | -8.615850e-47 |
Msa0294090 | Msa0320140 | 0.820540 | 6.499452e-53 | -8.615850e-47 |
Msa0294200 | Msa0320140 | 0.808717 | 2.699806e-50 | -8.615850e-47 |
Msa0303900 | Msa0320140 | 0.831658 | 1.473451e-55 | -8.615850e-47 |
Msa0310190 | Msa0320140 | 0.838901 | 2.182795e-57 | -8.615850e-47 |
Msa0314240 | Msa0320140 | 0.811127 | 8.178663e-51 | -8.615850e-47 |
Msa0316230 | Msa0320140 | 0.822506 | 2.283796e-53 | -8.615850e-47 |
Msa0320130 | Msa0320140 | 0.991041 | 1.359128e-185 | -8.615850e-47 |
Msa0320140 | Msa0320160 | 0.819959 | 8.829437e-53 | -8.615850e-47 |
Msa0320140 | Msa0320170 | 0.839212 | 1.813243e-57 | -8.615850e-47 |
Msa0320140 | Msa0324810 | 0.854967 | 8.649546e-62 | -8.615850e-47 |
Msa0320140 | Msa0331190 | 0.818995 | 1.465193e-52 | -8.615850e-47 |
Msa0320140 | Msa0333770 | 0.823406 | 1.409540e-53 | -8.615850e-47 |
Msa0320140 | Msa0335050 | 0.808988 | 2.362664e-50 | -8.615850e-47 |
Msa0320140 | Msa0336550 | -0.815812 | 7.631244e-52 | -8.615850e-47 |
Msa0320140 | Msa0336640 | 0.801359 | 9.344847e-49 | -8.615850e-47 |
Msa0320140 | Msa0346170 | 0.820105 | 8.176545e-53 | -8.615850e-47 |
Msa0320140 | Msa0347320 | 0.825528 | 4.461876e-54 | -8.615850e-47 |
Msa0320140 | Msa0350180 | 0.811200 | 7.885053e-51 | -8.615850e-47 |
Msa0320140 | Msa0353010 | 0.824995 | 5.964814e-54 | -8.615850e-47 |
Msa0320140 | Msa0357510 | 0.800621 | 1.322878e-48 | -8.615850e-47 |
Msa0320140 | Msa0367350 | 0.804453 | 2.144365e-49 | -8.615850e-47 |
Msa0320140 | Msa0372380 | -0.800471 | 1.419185e-48 | -8.615850e-47 |
Msa0320140 | Msa0378320 | 0.821972 | 3.038292e-53 | -8.615850e-47 |
Msa0320140 | Msa0390200 | 0.864647 | 1.046411e-64 | -8.615850e-47 |
Msa0320140 | Msa0396870 | 0.800585 | 1.345373e-48 | -8.615850e-47 |
Msa0320140 | Msa0397200 | 0.806284 | 8.862285e-50 | -8.615850e-47 |
Msa0320140 | Msa0400010 | 0.817659 | 2.939730e-52 | -8.615850e-47 |
Msa0320140 | Msa0405210 | 0.805378 | 1.374142e-49 | -8.615850e-47 |
Msa0320140 | Msa0414480 | 0.813412 | 2.593504e-51 | -8.615850e-47 |
Msa0320140 | Msa0415010 | 0.825437 | 4.690927e-54 | -8.615850e-47 |
Msa0320140 | Msa0420890 | 0.813393 | 2.618859e-51 | -8.615850e-47 |
Msa0320140 | Msa0421080 | 0.854767 | 9.883616e-62 | -8.615850e-47 |
Msa0320140 | Msa0427660 | 0.825737 | 3.982851e-54 | -8.615850e-47 |
Msa0320140 | Msa0433090 | 0.834957 | 2.219072e-56 | -8.615850e-47 |
Msa0320140 | Msa0434460 | 0.801261 | 9.789534e-49 | -8.615850e-47 |
Msa0320140 | Msa0438520 | 0.812092 | 5.043548e-51 | -8.615850e-47 |
Msa0320140 | Msa0441750 | 0.816163 | 6.371817e-52 | -8.615850e-47 |
Msa0320140 | Msa0447160 | 0.818927 | 1.517977e-52 | -8.615850e-47 |
Msa0320140 | Msa0459930 | 0.833917 | 4.048710e-56 | -8.615850e-47 |
Msa0320140 | Msa0460600 | 0.822596 | 2.176212e-53 | -8.615850e-47 |
Msa0320140 | Msa0464310 | 0.812285 | 4.578036e-51 | -8.615850e-47 |
Msa0320140 | Msa0466850 | 0.818748 | 1.667290e-52 | -8.615850e-47 |
Msa0320140 | Msa0480540 | 0.835793 | 1.364480e-56 | -8.615850e-47 |
Msa0320140 | Msa0480550 | 0.828615 | 8.148238e-55 | -8.615850e-47 |
Msa0320140 | Msa0489370 | 0.837833 | 4.116256e-57 | -8.615850e-47 |
Msa0320140 | Msa0490100 | 0.819007 | 1.456044e-52 | -8.615850e-47 |
Msa0320140 | Msa0493710 | 0.813323 | 2.712599e-51 | -8.615850e-47 |
Msa0320140 | Msa0493870 | 0.835607 | 1.520908e-56 | -8.615850e-47 |
Msa0320140 | Msa0497680 | 0.804561 | 2.036625e-49 | -8.615850e-47 |
Msa0320140 | Msa0510870 | 0.836167 | 1.096907e-56 | -8.615850e-47 |
Msa0320140 | Msa0512280 | 0.820769 | 5.756977e-53 | -8.615850e-47 |
Msa0320140 | Msa0513670 | 0.818075 | 2.368119e-52 | -8.615850e-47 |
Msa0320140 | Msa0518490 | 0.814994 | 1.160194e-51 | -8.615850e-47 |
Msa0320140 | Msa0522170 | 0.800746 | 1.247452e-48 | -8.615850e-47 |
Msa0320140 | Msa0524710 | 0.845208 | 4.686758e-59 | -8.615850e-47 |
Msa0320140 | Msa0526840 | -0.804354 | 2.248943e-49 | -8.615850e-47 |
Msa0320140 | Msa0531050 | 0.805907 | 1.064104e-49 | -8.615850e-47 |
Msa0320140 | Msa0531800 | 0.825081 | 5.693137e-54 | -8.615850e-47 |
Msa0320140 | Msa0535570 | 0.826282 | 2.955091e-54 | -8.615850e-47 |
Msa0320140 | Msa0537210 | 0.809991 | 1.439411e-50 | -8.615850e-47 |
Msa0320140 | Msa0538450 | 0.805172 | 1.517308e-49 | -8.615850e-47 |
Msa0320140 | Msa0538520 | 0.802985 | 4.326143e-49 | -8.615850e-47 |
Msa0320140 | Msa0545680 | 0.807756 | 4.327557e-50 | -8.615850e-47 |
Msa0320140 | Msa0548790 | 0.824201 | 9.177835e-54 | -8.615850e-47 |
Msa0320140 | Msa0554660 | 0.804767 | 1.844526e-49 | -8.615850e-47 |
Msa0320140 | Msa0554770 | -0.808174 | 3.525944e-50 | -8.615850e-47 |
Msa0320140 | Msa0557240 | 0.847381 | 1.198925e-59 | -8.615850e-47 |
Msa0320140 | Msa0559440 | -0.814141 | 1.791950e-51 | -8.615850e-47 |
Msa0320140 | Msa0559640 | -0.802436 | 5.616055e-49 | -8.615850e-47 |
Msa0320140 | Msa0561110 | 0.810584 | 1.072076e-50 | -8.615850e-47 |
Msa0320140 | Msa0561830 | 0.887213 | 1.738904e-72 | -8.615850e-47 |
Msa0320140 | Msa0564000 | -0.802425 | 5.644584e-49 | -8.615850e-47 |
Msa0320140 | Msa0565120 | 0.816711 | 4.803320e-52 | -8.615850e-47 |
Msa0320140 | Msa0565180 | 0.822608 | 2.162820e-53 | -8.615850e-47 |
Msa0320140 | Msa0566530 | 0.827882 | 1.223914e-54 | -8.615850e-47 |
Msa0320140 | Msa0568780 | -0.809362 | 1.965045e-50 | -8.615850e-47 |
Msa0320140 | Msa0572700 | 0.823485 | 1.350692e-53 | -8.615850e-47 |
Msa0320140 | Msa0574420 | 0.818341 | 2.062160e-52 | -8.615850e-47 |
Msa0320140 | Msa0577290 | -0.805004 | 1.645525e-49 | -8.615850e-47 |
Msa0320140 | Msa0580840 | 0.825182 | 5.387978e-54 | -8.615850e-47 |
Msa0320140 | Msa0587710 | 0.800313 | 1.528253e-48 | -8.615850e-47 |
Msa0320140 | Msa0587730 | 0.835122 | 2.016448e-56 | -8.615850e-47 |
Msa0320140 | Msa0587930 | 0.804271 | 2.340398e-49 | -8.615850e-47 |
Msa0320140 | Msa0588040 | 0.833336 | 5.655421e-56 | -8.615850e-47 |
Msa0320140 | Msa0588730 | 0.860437 | 2.067622e-63 | -8.615850e-47 |
Msa0320140 | Msa0589740 | 0.805755 | 1.145314e-49 | -8.615850e-47 |
Msa0320140 | Msa0594470 | 0.808342 | 3.246735e-50 | -8.615850e-47 |
Msa0320140 | Msa0597800 | 0.859309 | 4.522623e-63 | -8.615850e-47 |
Msa0320140 | Msa0597820 | 0.863230 | 2.888127e-64 | -8.615850e-47 |
Msa0320140 | Msa0614960 | 0.869316 | 3.391873e-66 | -8.615850e-47 |
Msa0320140 | Msa0615200 | 0.808169 | 3.533791e-50 | -8.615850e-47 |
Msa0320140 | Msa0622800 | -0.814160 | 1.774372e-51 | -8.615850e-47 |
Msa0320140 | Msa0622930 | -0.807082 | 6.014097e-50 | -8.615850e-47 |
Msa0320140 | Msa0628200 | 0.832081 | 1.158547e-55 | -8.615850e-47 |
Msa0320140 | Msa0629030 | 0.913583 | 5.202571e-84 | -8.615850e-47 |
Msa0320140 | Msa0629040 | 0.878882 | 1.959706e-69 | -8.615850e-47 |
Msa0320140 | Msa0631700 | 0.801319 | 9.523978e-49 | -8.615850e-47 |
Msa0320140 | Msa0637590 | 0.820028 | 8.517627e-53 | -8.615850e-47 |
Msa0320140 | Msa0637700 | 0.808478 | 3.036820e-50 | -8.615850e-47 |
Msa0320140 | Msa0639410 | 0.801303 | 9.594806e-49 | -8.615850e-47 |
Msa0320140 | Msa0651820 | 0.857578 | 1.483422e-62 | -8.615850e-47 |
Msa0320140 | Msa0652590 | 0.886680 | 2.771262e-72 | -8.615850e-47 |
Msa0320140 | Msa0652600 | 0.821374 | 4.176276e-53 | -8.615850e-47 |
Msa0320140 | Msa0652610 | 0.833146 | 6.305003e-56 | -8.615850e-47 |
Msa0320140 | Msa0654500 | -0.813545 | 2.424391e-51 | -8.615850e-47 |
Msa0320140 | Msa0655370 | 0.871265 | 7.797657e-67 | -8.615850e-47 |
Msa0320140 | Msa0657260 | 0.843442 | 1.398003e-58 | -8.615850e-47 |
Msa0320140 | Msa0657340 | 0.821323 | 4.293067e-53 | -8.615850e-47 |
Msa0320140 | Msa0661330 | 0.811586 | 6.501543e-51 | -8.615850e-47 |
Msa0320140 | Msa0666580 | 0.914268 | 2.340391e-84 | -8.615850e-47 |
Msa0320140 | Msa0666910 | 0.804035 | 2.620569e-49 | -8.615850e-47 |
Msa0320140 | Msa0672090 | 0.825463 | 4.624152e-54 | -8.615850e-47 |
Msa0320140 | Msa0675590 | 0.805791 | 1.125588e-49 | -8.615850e-47 |
Msa0320140 | Msa0680460 | 0.827949 | 1.178972e-54 | -8.615850e-47 |
Msa0320140 | Msa0689840 | 0.800808 | 1.211274e-48 | -8.615850e-47 |
Msa0320140 | Msa0691350 | -0.802662 | 5.045155e-49 | -8.615850e-47 |
Msa0320140 | Msa0694320 | 0.841575 | 4.372153e-58 | -8.615850e-47 |
Msa0320140 | Msa0699170 | 0.864597 | 1.084260e-64 | -8.615850e-47 |
Msa0320140 | Msa0701430 | 0.818108 | 2.327901e-52 | -8.615850e-47 |
Msa0320140 | Msa0701490 | 0.839881 | 1.215330e-57 | -8.615850e-47 |
Msa0320140 | Msa0701560 | 0.842008 | 3.360249e-58 | -8.615850e-47 |
Msa0320140 | Msa0707870 | -0.813970 | 1.954251e-51 | -8.615850e-47 |
Msa0320140 | Msa0711230 | 0.808273 | 3.358167e-50 | -8.615850e-47 |
Msa0320140 | Msa0715040 | 0.805277 | 1.442907e-49 | -8.615850e-47 |
Msa0320140 | Msa0716620 | 0.865555 | 5.423251e-65 | -8.615850e-47 |
Msa0320140 | Msa0721260 | 0.837197 | 5.990650e-57 | -8.615850e-47 |
Msa0320140 | Msa0727230 | 0.836839 | 7.397103e-57 | -8.615850e-47 |
Msa0320140 | Msa0728230 | 0.870800 | 1.109792e-66 | -8.615850e-47 |
Msa0320140 | Msa0728520 | 0.905504 | 4.003866e-80 | -8.615850e-47 |
Msa0320140 | Msa0728570 | 0.876496 | 1.333132e-68 | -8.615850e-47 |
Msa0320140 | Msa0730890 | 0.808673 | 2.759483e-50 | -8.615850e-47 |
Msa0320140 | Msa0736560 | 0.824644 | 7.218107e-54 | -8.615850e-47 |
Msa0320140 | Msa0738570 | 0.825074 | 5.715736e-54 | -8.615850e-47 |
Msa0320140 | Msa0738680 | 0.802687 | 4.985032e-49 | -8.615850e-47 |
Msa0320140 | Msa0741600 | -0.804371 | 2.230987e-49 | -8.615850e-47 |
Msa0320140 | Msa0743370 | 0.840551 | 8.124165e-58 | -8.615850e-47 |
Msa0320140 | Msa0744550 | 0.838185 | 3.341206e-57 | -8.615850e-47 |
Msa0320140 | Msa0744560 | 0.829469 | 5.059633e-55 | -8.615850e-47 |
Msa0320140 | Msa0744710 | 0.839321 | 1.699036e-57 | -8.615850e-47 |
Msa0320140 | Msa0747710 | 0.835979 | 1.224297e-56 | -8.615850e-47 |
Msa0320140 | Msa0749140 | 0.807896 | 4.040261e-50 | -8.615850e-47 |
Msa0320140 | Msa0750790 | 0.868981 | 4.356782e-66 | -8.615850e-47 |
Msa0320140 | Msa0750830 | 0.892455 | 1.562246e-74 | -8.615850e-47 |
Msa0320140 | Msa0753410 | 0.851950 | 6.354116e-61 | -8.615850e-47 |
Msa0320140 | Msa0772350 | 0.884473 | 1.860353e-71 | -8.615850e-47 |
Msa0320140 | Msa0776540 | 0.908552 | 1.509697e-81 | -8.615850e-47 |
Msa0320140 | Msa0777600 | 0.846037 | 2.792185e-59 | -8.615850e-47 |
Msa0320140 | Msa0783580 | 0.820507 | 6.614585e-53 | -8.615850e-47 |
Msa0320140 | Msa0792890 | 0.810486 | 1.125508e-50 | -8.615850e-47 |
Msa0320140 | Msa0793570 | 0.825854 | 3.736137e-54 | -8.615850e-47 |
Msa0320140 | Msa0794090 | 0.801892 | 7.265330e-49 | -8.615850e-47 |
Msa0320140 | Msa0794200 | 0.877783 | 4.763334e-69 | -8.615850e-47 |
Msa0320140 | Msa0794240 | 0.853956 | 1.695628e-61 | -8.615850e-47 |
Msa0320140 | Msa0795320 | 0.841729 | 3.982805e-58 | -8.615850e-47 |
Msa0320140 | Msa0795330 | 0.852749 | 3.764260e-61 | -8.615850e-47 |
Msa0320140 | Msa0799120 | 0.825820 | 3.804601e-54 | -8.615850e-47 |
Msa0320140 | Msa0803880 | 0.801624 | 8.245793e-49 | -8.615850e-47 |
Msa0320140 | Msa0812050 | 0.811845 | 5.709199e-51 | -8.615850e-47 |
Msa0320140 | Msa0813710 | 0.824066 | 9.870222e-54 | -8.615850e-47 |
Msa0320140 | Msa0813840 | 0.809627 | 1.723151e-50 | -8.615850e-47 |
Msa0320140 | Msa0814660 | 0.841591 | 4.330243e-58 | -8.615850e-47 |
Msa0320140 | Msa0819110 | 0.829737 | 4.354119e-55 | -8.615850e-47 |
Msa0320140 | Msa0822680 | -0.801355 | 9.362888e-49 | -8.615850e-47 |
Msa0320140 | Msa0826240 | 0.846152 | 2.598293e-59 | -8.615850e-47 |
Msa0320140 | Msa0826360 | 0.841005 | 6.174676e-58 | -8.615850e-47 |
Msa0320140 | Msa0826370 | 0.820289 | 7.418861e-53 | -8.615850e-47 |
Msa0320140 | Msa0828910 | 0.811762 | 5.952006e-51 | -8.615850e-47 |
Msa0320140 | Msa0829990 | 0.813373 | 2.644839e-51 | -8.615850e-47 |
Msa0320140 | Msa0830930 | 0.804267 | 2.345343e-49 | -8.615850e-47 |
Msa0320140 | Msa0831310 | 0.823010 | 1.743626e-53 | -8.615850e-47 |
Msa0320140 | Msa0831450 | 0.826575 | 2.516530e-54 | -8.615850e-47 |
Msa0320140 | Msa0837550 | 0.885927 | 5.328543e-72 | -8.615850e-47 |
Msa0320140 | Msa0847140 | 0.800194 | 1.615802e-48 | -8.615850e-47 |
Msa0320140 | Msa0850480 | 0.800066 | 1.715687e-48 | -8.615850e-47 |
Msa0320140 | Msa0853080 | 0.800050 | 1.728866e-48 | -8.615850e-47 |
Msa0320140 | Msa0855260 | 0.836241 | 1.049940e-56 | -8.615850e-47 |
Msa0320140 | Msa0859230 | 0.809647 | 1.706216e-50 | -8.615850e-47 |
Msa0320140 | Msa0863850 | 0.801036 | 1.087980e-48 | -8.615850e-47 |
Msa0320140 | Msa0865810 | 0.825132 | 5.538417e-54 | -8.615850e-47 |
Msa0320140 | Msa0865820 | 0.826812 | 2.209089e-54 | -8.615850e-47 |
Msa0320140 | Msa0865830 | 0.855353 | 6.680808e-62 | -8.615850e-47 |
Msa0320140 | Msa0874750 | 0.858421 | 8.335285e-63 | -8.615850e-47 |
Msa0320140 | Msa0886370 | 0.824787 | 6.679985e-54 | -8.615850e-47 |
Msa0320140 | Msa0890210 | 0.807519 | 4.859118e-50 | -8.615850e-47 |
Msa0320140 | Msa0896920 | 0.842377 | 2.684278e-58 | -8.615850e-47 |
Msa0320140 | Msa0910560 | 0.855110 | 7.860807e-62 | -8.615850e-47 |
Msa0320140 | Msa0910590 | 0.841157 | 5.633156e-58 | -8.615850e-47 |
Msa0320140 | Msa0913500 | 0.817277 | 3.585421e-52 | -8.615850e-47 |
Msa0320140 | Msa0925940 | 0.808734 | 2.677098e-50 | -8.615850e-47 |
Msa0320140 | Msa0945320 | 0.814991 | 1.162181e-51 | -8.615850e-47 |
Msa0320140 | Msa0945330 | 0.819590 | 1.072007e-52 | -8.615850e-47 |
Msa0320140 | Msa0948430 | 0.850092 | 2.123417e-60 | -8.615850e-47 |
Msa0320140 | Msa0956580 | -0.826041 | 3.372524e-54 | -8.615850e-47 |
Msa0320140 | Msa0962290 | 0.815521 | 8.860190e-52 | -8.615850e-47 |
Msa0320140 | Msa0968990 | 0.804554 | 2.043236e-49 | -8.615850e-47 |
Msa0320140 | Msa0970790 | 0.801114 | 1.049178e-48 | -8.615850e-47 |
Msa0320140 | Msa0973850 | 0.801470 | 8.870739e-49 | -8.615850e-47 |
Msa0320140 | Msa0976400 | 0.866192 | 3.412151e-65 | -8.615850e-47 |
Msa0320140 | Msa0985380 | 0.853518 | 2.266084e-61 | -8.615850e-47 |
Msa0320140 | Msa0985980 | -0.816427 | 5.562170e-52 | -8.615850e-47 |
Msa0320140 | Msa0987020 | 0.821619 | 3.666029e-53 | -8.615850e-47 |
Msa0320140 | Msa0987550 | 0.814359 | 1.604175e-51 | -8.615850e-47 |
Msa0320140 | Msa0996980 | 0.805488 | 1.302733e-49 | -8.615850e-47 |
Msa0320140 | Msa1003730 | 0.811031 | 8.581049e-51 | -8.615850e-47 |
Msa0320140 | Msa1003920 | 0.819633 | 1.048452e-52 | -8.615850e-47 |
Msa0320140 | Msa1006030 | 0.804994 | 1.653586e-49 | -8.615850e-47 |
Msa0320140 | Msa1007900 | 0.816388 | 5.675291e-52 | -8.615850e-47 |
Msa0320140 | Msa1011140 | -0.807837 | 4.157805e-50 | -8.615850e-47 |
Msa0320140 | Msa1023430 | 0.863760 | 1.977938e-64 | -8.615850e-47 |
Msa0320140 | Msa1024420 | 0.804125 | 2.509788e-49 | -8.615850e-47 |
Msa0320140 | Msa1027340 | 0.829809 | 4.180752e-55 | -8.615850e-47 |
Msa0320140 | Msa1027400 | 0.821279 | 4.392782e-53 | -8.615850e-47 |
Msa0320140 | Msa1030210 | 0.832152 | 1.112888e-55 | -8.615850e-47 |
Msa0320140 | Msa1035050 | 0.857869 | 1.216167e-62 | -8.615850e-47 |
Msa0320140 | Msa1037360 | 0.803661 | 3.133458e-49 | -8.615850e-47 |
Msa0320140 | Msa1040330 | 0.842759 | 2.125099e-58 | -8.615850e-47 |
Msa0320140 | Msa1048390 | 0.817043 | 4.045992e-52 | -8.615850e-47 |
Msa0320140 | Msa1057940 | -0.806794 | 6.917341e-50 | -8.615850e-47 |
Msa0320140 | Msa1061840 | 0.861929 | 7.263179e-64 | -8.615850e-47 |
Msa0320140 | Msa1069250 | 0.836612 | 8.448526e-57 | -8.615850e-47 |
Msa0320140 | Msa1071350 | 0.850433 | 1.703110e-60 | -8.615850e-47 |
Msa0320140 | Msa1075090 | 0.841897 | 3.595430e-58 | -8.615850e-47 |
Msa0320140 | Msa1077970 | 0.840078 | 1.079854e-57 | -8.615850e-47 |
Msa0320140 | Msa1083100 | 0.810624 | 1.051007e-50 | -8.615850e-47 |
Msa0320140 | Msa1085820 | 0.862176 | 6.100635e-64 | -8.615850e-47 |
Msa0320140 | Msa1087210 | 0.803787 | 2.951020e-49 | -8.615850e-47 |
Msa0320140 | Msa1095590 | 0.805395 | 1.362600e-49 | -8.615850e-47 |
Msa0320140 | Msa1099640 | 0.804434 | 2.164550e-49 | -8.615850e-47 |
Msa0320140 | Msa1099650 | 0.865962 | 4.036150e-65 | -8.615850e-47 |
Msa0320140 | Msa1100330 | 0.821439 | 4.034830e-53 | -8.615850e-47 |
Msa0320140 | Msa1102210 | 0.819151 | 1.350164e-52 | -8.615850e-47 |
Msa0320140 | Msa1103450 | 0.818935 | 1.512041e-52 | -8.615850e-47 |
Msa0320140 | Msa1107220 | 0.823642 | 1.240863e-53 | -8.615850e-47 |
Msa0320140 | Msa1107250 | 0.804393 | 2.207060e-49 | -8.615850e-47 |
Msa0320140 | Msa1107510 | 0.845720 | 3.405656e-59 | -8.615850e-47 |
Msa0320140 | Msa1108610 | 0.814916 | 1.207671e-51 | -8.615850e-47 |
Msa0320140 | Msa1109880 | 0.803270 | 3.777092e-49 | -8.615850e-47 |
Msa0320140 | Msa1110900 | 0.863481 | 2.414539e-64 | -8.615850e-47 |
Msa0320140 | Msa1115900 | 0.801286 | 9.670734e-49 | -8.615850e-47 |
Msa0320140 | Msa1115980 | 0.829680 | 4.494395e-55 | -8.615850e-47 |
Msa0320140 | Msa1120580 | 0.811604 | 6.443550e-51 | -8.615850e-47 |
Msa0320140 | Msa1123000 | 0.800043 | 1.734433e-48 | -8.615850e-47 |
Msa0320140 | Msa1127940 | 0.828697 | 7.785818e-55 | -8.615850e-47 |
Msa0320140 | Msa1131120 | 0.845472 | 3.976372e-59 | -8.615850e-47 |
Msa0320140 | Msa1136630 | 0.883508 | 4.229542e-71 | -8.615850e-47 |
Msa0320140 | Msa1136690 | 0.848775 | 4.945023e-60 | -8.615850e-47 |
Msa0320140 | Msa1137750 | 0.806173 | 9.353377e-50 | -8.615850e-47 |
Msa0320140 | Msa1138110 | 0.829466 | 5.066959e-55 | -8.615850e-47 |
Msa0320140 | Msa1140700 | -0.817620 | 3.000617e-52 | -8.615850e-47 |
Msa0320140 | Msa1142390 | 0.826642 | 2.424991e-54 | -8.615850e-47 |
Msa0320140 | Msa1143250 | 0.801385 | 9.232420e-49 | -8.615850e-47 |
Msa0320140 | Msa1150760 | 0.806273 | 8.913739e-50 | -8.615850e-47 |
Msa0320140 | Msa1151070 | 0.868166 | 7.991938e-66 | -8.615850e-47 |
Msa0320140 | Msa1154570 | 0.830389 | 3.019498e-55 | -8.615850e-47 |
Msa0320140 | Msa1157110 | 0.800586 | 1.344706e-48 | -8.615850e-47 |
Msa0320140 | Msa1160540 | 0.801358 | 9.349339e-49 | -8.615850e-47 |
Msa0320140 | Msa1162430 | 0.821968 | 3.044294e-53 | -8.615850e-47 |
Msa0320140 | Msa1164230 | 0.810444 | 1.149465e-50 | -8.615850e-47 |
Msa0320140 | Msa1165860 | 0.831133 | 1.984411e-55 | -8.615850e-47 |
Msa0320140 | Msa1167910 | 0.804705 | 1.899795e-49 | -8.615850e-47 |
Msa0320140 | Msa1167940 | 0.800050 | 1.728706e-48 | -8.615850e-47 |
Msa0320140 | Msa1174280 | 0.820855 | 5.502706e-53 | -8.615850e-47 |
Msa0320140 | Msa1185270 | 0.817349 | 3.453172e-52 | -8.615850e-47 |
Msa0320140 | Msa1191270 | 0.832159 | 1.107918e-55 | -8.615850e-47 |
Msa0320140 | Msa1202110 | 0.849447 | 3.215596e-60 | -8.615850e-47 |
Msa0320140 | Msa1208050 | 0.824718 | 6.934784e-54 | -8.615850e-47 |
Msa0320140 | Msa1208140 | 0.829344 | 5.424401e-55 | -8.615850e-47 |
Msa0320140 | Msa1208830 | 0.820507 | 6.613516e-53 | -8.615850e-47 |
Msa0320140 | Msa1208910 | 0.826226 | 3.046851e-54 | -8.615850e-47 |
Msa0320140 | Msa1211320 | 0.800107 | 1.683373e-48 | -8.615850e-47 |
Msa0320140 | Msa1211610 | 0.833812 | 4.301885e-56 | -8.615850e-47 |
Msa0320140 | Msa1221520 | 0.835597 | 1.529225e-56 | -8.615850e-47 |
Msa0320140 | Msa1223960 | 0.808373 | 3.196814e-50 | -8.615850e-47 |
Msa0320140 | Msa1223990 | 0.819468 | 1.143407e-52 | -8.615850e-47 |
Msa0320140 | Msa1239190 | 0.810734 | 9.945818e-51 | -8.615850e-47 |
Msa0320140 | Msa1239210 | 0.807206 | 5.659724e-50 | -8.615850e-47 |
Msa0320140 | Msa1254870 | 0.848078 | 7.706854e-60 | -8.615850e-47 |
Msa0320140 | Msa1259570 | 0.809753 | 1.619324e-50 | -8.615850e-47 |
Msa0320140 | Msa1263110 | 0.816029 | 6.824253e-52 | -8.615850e-47 |
Msa0320140 | Msa1263120 | 0.813090 | 3.052002e-51 | -8.615850e-47 |
Msa0320140 | Msa1263370 | 0.809151 | 2.180362e-50 | -8.615850e-47 |
Msa0320140 | Msa1264940 | 0.835079 | 2.067855e-56 | -8.615850e-47 |
Msa0320140 | Msa1265940 | 0.812173 | 4.844403e-51 | -8.615850e-47 |
Msa0320140 | Msa1269200 | 0.828059 | 1.109282e-54 | -8.615850e-47 |
Msa0320140 | Msa1269500 | 0.800070 | 1.712473e-48 | -8.615850e-47 |
Msa0320140 | Msa1292560 | 0.811322 | 7.417854e-51 | -8.615850e-47 |
Msa0320140 | Msa1296490 | 0.826736 | 2.303638e-54 | -8.615850e-47 |
Msa0320140 | Msa1299480 | 0.822228 | 2.649790e-53 | -8.615850e-47 |
Msa0320140 | Msa1303150 | 0.839382 | 1.638666e-57 | -8.615850e-47 |
Msa0320140 | Msa1303400 | 0.804879 | 1.747489e-49 | -8.615850e-47 |
Msa0320140 | Msa1319760 | 0.816888 | 4.384059e-52 | -8.615850e-47 |
Msa0320140 | Msa1320160 | 0.841954 | 3.473441e-58 | -8.615850e-47 |
Msa0320140 | Msa1328430 | 0.848001 | 8.092796e-60 | -8.615850e-47 |
Msa0320140 | Msa1334000 | 0.830588 | 2.698901e-55 | -8.615850e-47 |
Msa0320140 | Msa1349420 | 0.841904 | 3.579625e-58 | -8.615850e-47 |
Msa0320140 | Msa1357840 | 0.822009 | 2.978945e-53 | -8.615850e-47 |
Msa0320140 | Msa1359770 | 0.811636 | 6.339512e-51 | -8.615850e-47 |
Msa0320140 | Msa1364690 | 0.832902 | 7.249813e-56 | -8.615850e-47 |
Msa0320140 | Msa1375640 | 0.814140 | 1.793098e-51 | -8.615850e-47 |
Msa0320140 | Msa1376520 | 0.825844 | 3.756454e-54 | -8.615850e-47 |
Msa0320140 | Msa1377190 | 0.800810 | 1.210023e-48 | -8.615850e-47 |
Msa0320140 | Msa1382740 | 0.810919 | 9.073861e-51 | -8.615850e-47 |
Msa0320140 | Msa1384130 | 0.808545 | 2.938318e-50 | -8.615850e-47 |
Msa0320140 | Msa1398110 | 0.833170 | 6.218333e-56 | -8.615850e-47 |
Msa0320140 | Msa1398120 | 0.845782 | 3.276094e-59 | -8.615850e-47 |
Msa0320140 | Msa1405530 | 0.813763 | 2.170814e-51 | -8.615850e-47 |
Msa0320140 | Msa1419210 | 0.828295 | 9.730937e-55 | -8.615850e-47 |
Msa0320140 | Msa1427000 | 0.804550 | 2.047366e-49 | -8.615850e-47 |
Msa0320140 | Msa1429190 | 0.826730 | 2.311183e-54 | -8.615850e-47 |
Msa0320140 | Msa1431020 | 0.804324 | 2.282148e-49 | -8.615850e-47 |
Msa0320140 | Msa1437590 | 0.843653 | 1.227469e-58 | -8.615850e-47 |
Msa0320140 | Msa1438160 | 0.803086 | 4.122223e-49 | -8.615850e-47 |
Msa0320140 | Msa1443990 | 0.801766 | 7.711805e-49 | -8.615850e-47 |
Msa0320140 | Msa1453890 | 0.826243 | 3.018597e-54 | -8.615850e-47 |
Msa0320140 | Msa1459920 | 0.848613 | 5.480842e-60 | -8.615850e-47 |
Msa0320140 | Msa1459930 | 0.846257 | 2.433069e-59 | -8.615850e-47 |
Msa0320140 | Msa1464140 | 0.802452 | 5.572621e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0320140 | MtrunA17_Chr2g0295021 | 100.000 | 141 | 0 | 0 | 1 | 141 | 1 | 141 | 1.17e-95 | 278 |
Msa0320140 | MtrunA17_Chr2g0295021 | 76.667 | 150 | 21 | 1 | 141 | 276 | 8 | 157 | 2.42e-74 | 224 |
Msa0320140 | MtrunA17_Chr2g0295001 | 100.000 | 141 | 0 | 0 | 1 | 141 | 1 | 141 | 1.17e-95 | 278 |
Msa0320140 | MtrunA17_Chr2g0295001 | 76.667 | 150 | 21 | 1 | 141 | 276 | 8 | 157 | 2.42e-74 | 224 |
Msa0320140 | MtrunA17_Chr2g0295041 | 87.417 | 151 | 5 | 1 | 141 | 277 | 8 | 158 | 4.58e-88 | 259 |
Msa0320140 | MtrunA17_Chr2g0295041 | 82.979 | 141 | 24 | 0 | 1 | 141 | 1 | 141 | 1.99e-79 | 237 |
Msa0320140 | MtrunA17_Chr2g0295051 | 86.525 | 141 | 19 | 0 | 1 | 141 | 1 | 141 | 7.93e-82 | 243 |
Msa0320140 | MtrunA17_Chr2g0295051 | 78.000 | 150 | 19 | 1 | 141 | 276 | 8 | 157 | 1.14e-74 | 225 |
Msa0320140 | MtrunA17_Chr2g0295064 | 85.106 | 141 | 21 | 0 | 1 | 141 | 68 | 208 | 1.52e-80 | 242 |
Msa0320140 | MtrunA17_Chr2g0295064 | 80.795 | 151 | 15 | 1 | 141 | 277 | 75 | 225 | 2.40e-79 | 239 |
Msa0320140 | MtrunA17_Chr4g0067951 | 72.340 | 141 | 39 | 0 | 1 | 141 | 1 | 141 | 2.93e-68 | 208 |
Msa0320140 | MtrunA17_Chr4g0067951 | 66.225 | 151 | 37 | 1 | 141 | 277 | 8 | 158 | 8.14e-62 | 192 |
Msa0320140 | MtrunA17_Chr6g0462311 | 70.922 | 141 | 41 | 0 | 1 | 141 | 1 | 141 | 7.29e-67 | 205 |
Msa0320140 | MtrunA17_Chr6g0462311 | 64.901 | 151 | 39 | 1 | 141 | 277 | 8 | 158 | 1.97e-60 | 189 |
Msa0320140 | MtrunA17_Chr6g0462291 | 70.714 | 140 | 41 | 0 | 1 | 140 | 1 | 140 | 5.52e-66 | 203 |
Msa0320140 | MtrunA17_Chr6g0462291 | 63.158 | 133 | 35 | 1 | 141 | 259 | 8 | 140 | 1.75e-47 | 156 |
Msa0320140 | MtrunA17_Chr2g0295141 | 63.571 | 140 | 51 | 0 | 1 | 140 | 1 | 140 | 4.22e-56 | 177 |
Msa0320140 | MtrunA17_Chr2g0295141 | 54.667 | 150 | 54 | 1 | 141 | 276 | 8 | 157 | 2.10e-48 | 158 |
Msa0320140 | MtrunA17_Chr2g0295091 | 60.000 | 140 | 56 | 0 | 1 | 140 | 1 | 140 | 2.00e-53 | 171 |
Msa0320140 | MtrunA17_Chr2g0295091 | 53.333 | 150 | 56 | 1 | 141 | 276 | 8 | 157 | 6.05e-47 | 154 |
Msa0320140 | MtrunA17_Chr2g0295104 | 63.077 | 130 | 48 | 0 | 1 | 130 | 1 | 130 | 7.44e-53 | 169 |
Msa0320140 | MtrunA17_Chr2g0295104 | 53.333 | 150 | 56 | 1 | 141 | 276 | 8 | 157 | 7.93e-46 | 151 |
Msa0320140 | MtrunA17_Chr2g0295081 | 59.712 | 139 | 56 | 0 | 1 | 139 | 1 | 139 | 9.82e-52 | 166 |
Msa0320140 | MtrunA17_Chr2g0295081 | 52.703 | 148 | 56 | 1 | 143 | 276 | 10 | 157 | 1.69e-45 | 150 |
Msa0320140 | MtrunA17_Chr2g0295124 | 60.000 | 140 | 56 | 0 | 1 | 140 | 1 | 140 | 2.39e-51 | 165 |
Msa0320140 | MtrunA17_Chr2g0295124 | 54.667 | 150 | 54 | 1 | 141 | 276 | 8 | 157 | 1.02e-46 | 154 |
Msa0320140 | MtrunA17_Chr2g0295211 | 41.304 | 138 | 80 | 1 | 1 | 137 | 1 | 138 | 2.00e-32 | 117 |
Msa0320140 | MtrunA17_Chr2g0295211 | 35.570 | 149 | 81 | 2 | 141 | 274 | 8 | 156 | 1.85e-27 | 103 |
Msa0320140 | MtrunA17_Chr4g0067841 | 41.304 | 138 | 80 | 1 | 1 | 137 | 1 | 138 | 2.13e-30 | 111 |
Msa0320140 | MtrunA17_Chr4g0067841 | 34.459 | 148 | 82 | 2 | 142 | 274 | 9 | 156 | 8.08e-25 | 97.1 |
Msa0320140 | MtrunA17_Chr4g0067921 | 46.094 | 128 | 63 | 4 | 1 | 125 | 1 | 125 | 6.84e-24 | 94.7 |
Msa0320140 | MtrunA17_Chr4g0067921 | 40.397 | 151 | 75 | 4 | 142 | 277 | 9 | 159 | 1.37e-23 | 94.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 79 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CATCAATAACCTTTGGAATA+AGG | 0.200219 | 2_4:-20423874 | None:intergenic |
AACGAAAGTAAGTTTCTTGA+TGG | 0.287513 | 2_4:-20423942 | None:intergenic |
AACGAAAGTGAGTTTCTTGA+TGG | 0.319436 | 2_4:-20428143 | None:intergenic |
CCCTTGATTTCCTCTTCACT+TGG | 0.329042 | 2_4:-20424443 | None:intergenic |
TTGATGACATCAACAACCTT+TGG | 0.332899 | 2_4:-20428082 | None:intergenic |
GGCCCTTGAGGGTTACTGTT+TGG | 0.340986 | 2_4:+20428741 | Msa0320140:CDS |
TATATGCTTTAGTTGTAATC+AGG | 0.341112 | 2_4:-20428769 | None:intergenic |
CTTCAACAATTTCAATACTT+TGG | 0.342783 | 2_4:-20423901 | None:intergenic |
GAGATCTTCTCCACTGTGTC+TGG | 0.364866 | 2_4:-20424335 | None:intergenic |
AGTGAGTTTCTTGATGGTTC+CGG | 0.364937 | 2_4:-20428137 | None:intergenic |
TGATGACATCAACAACCTTT+GGG | 0.365094 | 2_4:-20428081 | None:intergenic |
AAGAAACTTACTTTCGTTGA+AGG | 0.370871 | 2_4:+20423947 | Msa0320140:CDS |
AGTAAGTTTCTTGATGGTTC+CGG | 0.371837 | 2_4:-20423936 | None:intergenic |
ACTTGGTAGATGATGCTAAC+TGG | 0.375253 | 2_4:+20428521 | Msa0320140:intron |
AAGAAACTCACTTTCGTTGA+AGG | 0.376358 | 2_4:+20428148 | Msa0320140:CDS |
GAAATCTTCTCTACTGTGTC+TGG | 0.378194 | 2_4:-20428580 | None:intergenic |
CATCAACAACCTTTGGGATA+AGG | 0.380175 | 2_4:-20428075 | None:intergenic |
AAAAGTATTGACATTGTTGA+AGG | 0.419014 | 2_4:+20428103 | Msa0320140:CDS |
CAAAGTATTGAAATTGTTGA+AGG | 0.421501 | 2_4:+20423902 | Msa0320140:CDS |
ATTGACATTGTTGAAGGAAA+TGG | 0.422286 | 2_4:+20428109 | Msa0320140:CDS |
TGGATGGCATCAATAACCTT+TGG | 0.428619 | 2_4:-20423881 | None:intergenic |
AACAATTTCAATACTTTGGA+TGG | 0.439896 | 2_4:-20423897 | None:intergenic |
ATTGAAATTGTTGAAGGAAA+CGG | 0.445615 | 2_4:+20423908 | Msa0320140:CDS |
AAATCAAGGGTGGCAAAGCT+AGG | 0.448601 | 2_4:+20424456 | Msa0320140:CDS |
TTTGAGTCTAAATTGTCTGC+AGG | 0.453113 | 2_4:+20424359 | Msa0320140:CDS |
TTTGCAATGGATCCTCCATC+TGG | 0.453770 | 2_4:-20424383 | None:intergenic |
GCTTACAACTACAGCATAGT+TGG | 0.463271 | 2_4:+20424299 | Msa0320140:CDS |
GCTTTAGTTGTAATCAGGAT+TGG | 0.467799 | 2_4:-20428764 | None:intergenic |
ACATTAGTATTATATCATCA+TGG | 0.474977 | 2_4:+20423769 | Msa0320140:exon |
CATGGGTGTATTCAACTTTG+AGG | 0.475033 | 2_4:+20423787 | Msa0320140:exon |
TACAGCATAGTTGGTGGTGG+TGG | 0.475041 | 2_4:+20424308 | Msa0320140:CDS |
AGAGCTTTGTAAAGTCTAGC+AGG | 0.480944 | 2_4:-20423833 | None:intergenic |
GCTTACAACTACAGCATAGT+TGG | 0.483791 | 2_4:+20428544 | Msa0320140:CDS |
AAAGCTTTGTGAAGTGTAGC+AGG | 0.484835 | 2_4:-20428034 | None:intergenic |
TTTGAAGCTAAATTGTCTGC+AGG | 0.489005 | 2_4:+20428604 | Msa0320140:CDS |
GGTGGCAAAGCTAGGGGTGA+TGG | 0.489081 | 2_4:+20424464 | Msa0320140:CDS |
AATCAAGGGTGGCAAAGCTA+GGG | 0.491277 | 2_4:+20424457 | Msa0320140:CDS |
TTTGCAATGGATCCTCCATT+CGG | 0.495837 | 2_4:-20428628 | None:intergenic |
ACTGTGAAATACTTCACAAA+AGG | 0.498744 | 2_4:+20424410 | Msa0320140:CDS |
ACCAAGTGAAGAGGAAATCA+AGG | 0.498836 | 2_4:+20424442 | Msa0320140:CDS |
CTCTTGAGTTCCTCTTCACT+AGG | 0.501934 | 2_4:-20428688 | None:intergenic |
ACTAGGAGTAGCATCACCTT+TGG | 0.504856 | 2_4:-20428671 | None:intergenic |
GTTGAAGGAAATGGTGGCTC+CGG | 0.506022 | 2_4:+20428118 | Msa0320140:CDS |
CTTGGTAGATGATGCTAACT+GGG | 0.513123 | 2_4:+20428522 | Msa0320140:intron |
TTCTGATAACCTTATTCCAA+AGG | 0.526563 | 2_4:+20423865 | Msa0320140:CDS |
AAAGTATGATTTGCACAAAG+TGG | 0.527363 | 2_4:+20424253 | Msa0320140:CDS |
TTTCACAGTAAGCTTTGCAA+TGG | 0.527944 | 2_4:-20424396 | None:intergenic |
GTTGAAGGAAACGGTGGTGC+CGG | 0.528042 | 2_4:+20423917 | Msa0320140:CDS |
ACTCAAGAGTGGCAAAGCTA+AGG | 0.529920 | 2_4:+20428702 | Msa0320140:CDS |
CTCAAGAGTGGCAAAGCTAA+GGG | 0.532020 | 2_4:+20428703 | Msa0320140:CDS |
TTTCACACTAAGCTTTGCAA+TGG | 0.532493 | 2_4:-20428641 | None:intergenic |
TGCAGACAATTTAGACTCAA+AGG | 0.553148 | 2_4:-20424357 | None:intergenic |
AAATTGTCTGCAGGGCCAGA+TGG | 0.558648 | 2_4:+20424368 | Msa0320140:CDS |
AAGTGTAGCAGGAGCTACAA+TGG | 0.570662 | 2_4:-20428023 | None:intergenic |
CATTAGTATTATATCATCAT+GGG | 0.574725 | 2_4:+20423770 | Msa0320140:exon |
TTGAGTCTAAATTGTCTGCA+GGG | 0.579973 | 2_4:+20424360 | Msa0320140:CDS |
AAATTGTCTGCAGGTCCGAA+TGG | 0.591580 | 2_4:+20428613 | Msa0320140:CDS |
AGTGGCAAAGCTAAGGGTGA+TGG | 0.593000 | 2_4:+20428709 | Msa0320140:CDS |
AGCAGGAGCTACAATGGAGG+TGG | 0.593310 | 2_4:-20428017 | None:intergenic |
TACAACTACAGCATAGTTGG+AGG | 0.598501 | 2_4:+20428547 | Msa0320140:CDS |
TGATGCTGCACCAAGTGAAG+AGG | 0.603594 | 2_4:+20424433 | Msa0320140:CDS |
TGGCCAAACAGTAACCCTCA+AGG | 0.618520 | 2_4:-20428744 | None:intergenic |
TTGTCTGCAGGGCCAGATGG+AGG | 0.618761 | 2_4:+20424371 | Msa0320140:CDS |
TACAACTACAGCATAGTTGG+TGG | 0.619903 | 2_4:+20424302 | Msa0320140:CDS |
AACTACAGCATAGTTGGTGG+TGG | 0.623337 | 2_4:+20424305 | Msa0320140:CDS |
TGCTGACAACCTTATCCCAA+AGG | 0.624297 | 2_4:+20428066 | Msa0320140:CDS |
GGCCAAACAGTAACCCTCAA+GGG | 0.627034 | 2_4:-20428743 | None:intergenic |
ATCAAGGGTGGCAAAGCTAG+GGG | 0.634094 | 2_4:+20424458 | Msa0320140:CDS |
TGATGCTACTCCTAGTGAAG+AGG | 0.634756 | 2_4:+20428678 | Msa0320140:CDS |
GACATTGTTGAAGGAAATGG+TGG | 0.641583 | 2_4:+20428112 | Msa0320140:CDS |
AGCAGGAGCTACAATAGATG+TGG | 0.641681 | 2_4:-20423816 | None:intergenic |
TTGTCTGCAGGTCCGAATGG+AGG | 0.646240 | 2_4:+20428616 | Msa0320140:CDS |
AGTGTGAAATACTTCACCAA+AGG | 0.651010 | 2_4:+20428655 | Msa0320140:CDS |
CCAAGTGAAGAGGAAATCAA+GGG | 0.664848 | 2_4:+20424443 | Msa0320140:CDS |
AGTGAAGAGGAACTCAAGAG+TGG | 0.684104 | 2_4:+20428691 | Msa0320140:CDS |
AGTGAAGAGGAAATCAAGGG+TGG | 0.695634 | 2_4:+20424446 | Msa0320140:CDS |
TGTAGCAGGAGCTACAATGG+AGG | 0.722910 | 2_4:-20428020 | None:intergenic |
GAAATTGTTGAAGGAAACGG+TGG | 0.726108 | 2_4:+20423911 | Msa0320140:CDS |
TGGTGGACTTCCAGACACAG+TGG | 0.739823 | 2_4:+20424325 | Msa0320140:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATATAATAAAAGAAAAG+AGG | - | chr2_4:20424060-20424079 | None:intergenic | 10.0% |
!!! | TCTTTTCTTTTATTATATAT+TGG | + | chr2_4:20424059-20424078 | Msa0320140:intron | 10.0% |
!! | GTATTATTATAATTTATTGA+AGG | - | chr2_4:20424683-20424702 | None:intergenic | 10.0% |
!!! | TAAAAAAACTTTAAAGATAT+AGG | - | chr2_4:20425872-20425891 | None:intergenic | 10.0% |
!!! | TCTTTAAAGTTTTTTTATTT+TGG | + | chr2_4:20425875-20425894 | Msa0320140:intron | 10.0% |
!!! | ATAATAAACTTTAAAGATAT+AGG | - | chr2_4:20425977-20425996 | None:intergenic | 10.0% |
!!! | TTTAGAGTTAAATATATAAA+TGG | - | chr2_4:20426344-20426363 | None:intergenic | 10.0% |
!!! | TTTTGTTAGTATTATTTTAT+CGG | + | chr2_4:20427205-20427224 | Msa0320140:intron | 10.0% |
!! | ACTATAAGTAGTAAAATAAA+AGG | + | chr2_4:20425072-20425091 | Msa0320140:intron | 15.0% |
!!! | TTAAAGTTTTTTTATTTTGG+TGG | + | chr2_4:20425878-20425897 | Msa0320140:intron | 15.0% |
!!! | ATTCATTTTAGTCTTTATTT+TGG | + | chr2_4:20426125-20426144 | Msa0320140:intron | 15.0% |
!!! | AAATATTTTATTTTTGCGTT+TGG | - | chr2_4:20426254-20426273 | None:intergenic | 15.0% |
!! | TAAAAACAAAGTTATATCAA+TGG | - | chr2_4:20426629-20426648 | None:intergenic | 15.0% |
!!! | CATTTTGAAACAAATTTTTT+TGG | - | chr2_4:20427525-20427544 | None:intergenic | 15.0% |
!! | AGAAAAAATTATTATTGCAT+TGG | - | chr2_4:20427565-20427584 | None:intergenic | 15.0% |
!!! | TAGTTTTAAAAGTAATACTT+TGG | - | chr2_4:20427628-20427647 | None:intergenic | 15.0% |
!! | AAATTATCCTTATTAACTAT+TGG | - | chr2_4:20427652-20427671 | None:intergenic | 15.0% |
!! | AATAGTTAATAAGGATAATT+TGG | + | chr2_4:20427651-20427670 | Msa0320140:intron | 15.0% |
!! | AATCTTACTTATTAAGATTT+AGG | + | chr2_4:20428204-20428223 | Msa0320140:intron | 15.0% |
!! | ATCTTACTTATTAAGATTTA+GGG | + | chr2_4:20428205-20428224 | Msa0320140:intron | 15.0% |
!!! | TCATTTTCTCAAAATTTTAT+CGG | + | chr2_4:20428328-20428347 | Msa0320140:intron | 15.0% |
!!! | ATATTTAGGTTTTTAAAAGT+AGG | - | chr2_4:20428415-20428434 | None:intergenic | 15.0% |
!! | AACCTAAATATATTAAGTAA+TGG | + | chr2_4:20428424-20428443 | Msa0320140:intron | 15.0% |
!! | ACATTAGTATTATATCATCA+TGG | + | chr2_4:20423769-20423788 | Msa0320140:exon | 20.0% |
!! | CATTAGTATTATATCATCAT+GGG | + | chr2_4:20423770-20423789 | Msa0320140:exon | 20.0% |
!! | ATATATGTGAAAAATTGAAG+TGG | + | chr2_4:20423977-20423996 | Msa0320140:intron | 20.0% |
!! | TATTATAATTTATTGAAGGG+AGG | - | chr2_4:20424679-20424698 | None:intergenic | 20.0% |
!!! | TTATATGTGGTTTTCAAATT+TGG | + | chr2_4:20424754-20424773 | Msa0320140:intron | 20.0% |
!!! | TATATGTGGTTTTCAAATTT+GGG | + | chr2_4:20424755-20424774 | Msa0320140:intron | 20.0% |
!!! | GTAATTTTGTATTGGAAATT+TGG | - | chr2_4:20424837-20424856 | None:intergenic | 20.0% |
!!! | CTACATAAGTAATTTTGTAT+TGG | - | chr2_4:20424845-20424864 | None:intergenic | 20.0% |
!! | TAACAAATATAAAGAAACCA+TGG | + | chr2_4:20424871-20424890 | Msa0320140:intron | 20.0% |
!!! | TTACCTTTTTTTTTCTTTCA+CGG | - | chr2_4:20424981-20425000 | None:intergenic | 20.0% |
!! | ACAAATCTAAAAAACTCAAA+TGG | + | chr2_4:20425118-20425137 | Msa0320140:intron | 20.0% |
!!! | TGAAGGATATTTTATTTTGT+CGG | + | chr2_4:20425227-20425246 | Msa0320140:intron | 20.0% |
!!! | TAATTTTAGTCTTCGTATTT+TGG | + | chr2_4:20426056-20426075 | Msa0320140:intron | 20.0% |
!! | AAAGAAAAAAATTGTGAACT+TGG | - | chr2_4:20426512-20426531 | None:intergenic | 20.0% |
!!! | ATATTGAGTTTTAATGATGT+CGG | - | chr2_4:20426700-20426719 | None:intergenic | 20.0% |
!! | TGGATTATTAATTATCTTAG+TGG | + | chr2_4:20427129-20427148 | Msa0320140:intron | 20.0% |
!! | AAACTAACCAATAGTTAATA+AGG | + | chr2_4:20427642-20427661 | Msa0320140:intron | 20.0% |
!!! | CCATTTTTTTAATTCACATT+GGG | - | chr2_4:20427817-20427836 | None:intergenic | 20.0% |
!!! | TTATTAAGATTTAGGGTTTA+GGG | + | chr2_4:20428212-20428231 | Msa0320140:intron | 20.0% |
!! | GACCATTACTTAATATATTT+AGG | - | chr2_4:20428429-20428448 | None:intergenic | 20.0% |
! | AACAATTTCAATACTTTGGA+TGG | - | chr2_4:20423900-20423919 | None:intergenic | 25.0% |
! | CTTCAACAATTTCAATACTT+TGG | - | chr2_4:20423904-20423923 | None:intergenic | 25.0% |
!!! | CAAAGTATTGAAATTGTTGA+AGG | + | chr2_4:20423902-20423921 | Msa0320140:CDS | 25.0% |
! | ATTGAAATTGTTGAAGGAAA+CGG | + | chr2_4:20423908-20423927 | Msa0320140:CDS | 25.0% |
! | AACAAGAATCAAACATTTGA+TGG | - | chr2_4:20424020-20424039 | None:intergenic | 25.0% |
! | TTTCACAATTACTAACATGA+TGG | - | chr2_4:20424205-20424224 | None:intergenic | 25.0% |
! | TGCATGTAACTATTTATATG+TGG | + | chr2_4:20424741-20424760 | Msa0320140:intron | 25.0% |
!! | AATGGTTTAGAATAATAGAG+AGG | - | chr2_4:20424915-20424934 | None:intergenic | 25.0% |
! | ATACCGTGAAAGAAAAAAAA+AGG | + | chr2_4:20424975-20424994 | Msa0320140:intron | 25.0% |
!! | TCACAGATTTTACATTTTGA+AGG | + | chr2_4:20425004-20425023 | Msa0320140:intron | 25.0% |
! | TCTAAAAAACTCAAATGGTT+TGG | + | chr2_4:20425123-20425142 | Msa0320140:intron | 25.0% |
!!! | AAAATTGATTTCAAGTTCCT+AGG | + | chr2_4:20425588-20425607 | Msa0320140:intron | 25.0% |
! | AGTTATAACAAACCAAACTA+AGG | - | chr2_4:20425706-20425725 | None:intergenic | 25.0% |
! | GTTAACGCAACAAAAAAAAA+GGG | + | chr2_4:20425805-20425824 | Msa0320140:intron | 25.0% |
! | AACAAAAAAAAAGGGAAAGA+CGG | + | chr2_4:20425813-20425832 | Msa0320140:intron | 25.0% |
!!! | AAGTTTTTTTATTTTGGTGG+TGG | + | chr2_4:20425881-20425900 | Msa0320140:intron | 25.0% |
! | GACAATGCATAATATATGTA+AGG | - | chr2_4:20425926-20425945 | None:intergenic | 25.0% |
! | AATACGAAGACTAAAATTAG+TGG | - | chr2_4:20426055-20426074 | None:intergenic | 25.0% |
! | CAATATGATGAAAGATTGTA+AGG | - | chr2_4:20426088-20426107 | None:intergenic | 25.0% |
! | GGTCTTTATTGTTTATGTAA+GGG | - | chr2_4:20426233-20426252 | None:intergenic | 25.0% |
! | TGGTCTTTATTGTTTATGTA+AGG | - | chr2_4:20426234-20426253 | None:intergenic | 25.0% |
! | AGAGACTGCAATTATTTATT+TGG | + | chr2_4:20426376-20426395 | Msa0320140:intron | 25.0% |
!! | GGTGACTTTAATGTATTTTT+AGG | - | chr2_4:20426679-20426698 | None:intergenic | 25.0% |
! | AAATTCCACATAAAATGTGA+TGG | + | chr2_4:20426848-20426867 | Msa0320140:intron | 25.0% |
!! | TTTTTCTATTATCTCTCTCT+GGG | + | chr2_4:20427019-20427038 | Msa0320140:intron | 25.0% |
! | TATCTTAGTGGTTAACATAA+TGG | + | chr2_4:20427141-20427160 | Msa0320140:intron | 25.0% |
! | ATCTTAGTGGTTAACATAAT+GGG | + | chr2_4:20427142-20427161 | Msa0320140:intron | 25.0% |
!!! | TATTATTTTATCGGACTCTT+GGG | + | chr2_4:20427214-20427233 | Msa0320140:intron | 25.0% |
! | CCCAATGTGAATTAAAAAAA+TGG | + | chr2_4:20427814-20427833 | Msa0320140:intron | 25.0% |
!!! | GCCATTTTTTTAATTCACAT+TGG | - | chr2_4:20427818-20427837 | None:intergenic | 25.0% |
! | TGAATTAAAAAAATGGCCTA+AGG | + | chr2_4:20427821-20427840 | Msa0320140:intron | 25.0% |
! | ACTTGCATTATAATTCATCA+TGG | + | chr2_4:20427970-20427989 | Msa0320140:intron | 25.0% |
! | CTTGCATTATAATTCATCAT+GGG | + | chr2_4:20427971-20427990 | Msa0320140:intron | 25.0% |
!!! | AAAAGTATTGACATTGTTGA+AGG | + | chr2_4:20428103-20428122 | Msa0320140:CDS | 25.0% |
!! | CTTATTAAGATTTAGGGTTT+AGG | + | chr2_4:20428211-20428230 | Msa0320140:intron | 25.0% |
TTCTGATAACCTTATTCCAA+AGG | + | chr2_4:20423865-20423884 | Msa0320140:CDS | 30.0% | |
!! | CATCAATAACCTTTGGAATA+AGG | - | chr2_4:20423877-20423896 | None:intergenic | 30.0% |
AACGAAAGTAAGTTTCTTGA+TGG | - | chr2_4:20423945-20423964 | None:intergenic | 30.0% | |
AAGAAACTTACTTTCGTTGA+AGG | + | chr2_4:20423947-20423966 | Msa0320140:CDS | 30.0% | |
! | AAAGTATGATTTGCACAAAG+TGG | + | chr2_4:20424253-20424272 | Msa0320140:CDS | 30.0% |
ACTGTGAAATACTTCACAAA+AGG | + | chr2_4:20424410-20424429 | Msa0320140:CDS | 30.0% | |
AGCTATATGCTTTAGTAATC+AGG | - | chr2_4:20424527-20424546 | None:intergenic | 30.0% | |
TATATCATGTGTGCTTGATT+TGG | + | chr2_4:20424595-20424614 | Msa0320140:intron | 30.0% | |
AAAAGGAAAGAGAGAATTAC+AGG | - | chr2_4:20424624-20424643 | None:intergenic | 30.0% | |
!!! | AAACCATGGTTTTGTTTCAT+TGG | + | chr2_4:20424885-20424904 | Msa0320140:intron | 30.0% |
!!! | AACCATGGTTTTGTTTCATT+GGG | + | chr2_4:20424886-20424905 | Msa0320140:intron | 30.0% |
! | TCCTTCATGTTTCTACTAAT+GGG | - | chr2_4:20425214-20425233 | None:intergenic | 30.0% |
! | ATCCTTCATGTTTCTACTAA+TGG | - | chr2_4:20425215-20425234 | None:intergenic | 30.0% |
AATGCAGGTTTATAACTGAT+TGG | + | chr2_4:20425260-20425279 | Msa0320140:intron | 30.0% | |
ACAAATAAGATGAGAGTTAG+AGG | + | chr2_4:20425351-20425370 | Msa0320140:intron | 30.0% | |
TAAAACACTCAAAACACCTA+TGG | - | chr2_4:20425457-20425476 | None:intergenic | 30.0% | |
!! | GTTTTGAGTGTTTTATAGTG+AGG | + | chr2_4:20425462-20425481 | Msa0320140:intron | 30.0% |
GATGAAGAATTAGAGATCAA+GGG | + | chr2_4:20425529-20425548 | Msa0320140:intron | 30.0% | |
CGTTAACGCAACAAAAAAAA+AGG | + | chr2_4:20425804-20425823 | Msa0320140:intron | 30.0% | |
TGCATAATATATGTAAGGTC+CGG | - | chr2_4:20425921-20425940 | None:intergenic | 30.0% | |
TGAGCTTAACTAAGTTGTTA+TGG | - | chr2_4:20425948-20425967 | None:intergenic | 30.0% | |
! | CAATTCCATCACATTTTATG+TGG | - | chr2_4:20426856-20426875 | None:intergenic | 30.0% |
! | CACATAAAATGTGATGGAAT+TGG | + | chr2_4:20426854-20426873 | Msa0320140:intron | 30.0% |
AGACAAAAAGAGAGGAAAAA+GGG | + | chr2_4:20426950-20426969 | Msa0320140:intron | 30.0% | |
AGAGATAATAGAAAAAGGAC+TGG | - | chr2_4:20427015-20427034 | None:intergenic | 30.0% | |
CAGAGAGAGATAATAGAAAA+AGG | - | chr2_4:20427020-20427039 | None:intergenic | 30.0% | |
! | CTTTTTCTATTATCTCTCTC+TGG | + | chr2_4:20427018-20427037 | Msa0320140:intron | 30.0% |
! | TTGAAATAAGCATTGTCTTC+AGG | - | chr2_4:20427061-20427080 | None:intergenic | 30.0% |
!! | GTATTATTTTATCGGACTCT+TGG | + | chr2_4:20427213-20427232 | Msa0320140:intron | 30.0% |
!! | AAGTGACACTCATTTTGAAA+CGG | - | chr2_4:20427499-20427518 | None:intergenic | 30.0% |
TGTGCATAGTATTAATTGGA+GGG | - | chr2_4:20427599-20427618 | None:intergenic | 30.0% | |
GTAGTGTGCATAGTATTAAT+TGG | - | chr2_4:20427603-20427622 | None:intergenic | 30.0% | |
TTCACATTGGGATATGAATT+TGG | - | chr2_4:20427805-20427824 | None:intergenic | 30.0% | |
GGAAAATGATGAATAATTCC+AGG | - | chr2_4:20427848-20427867 | None:intergenic | 30.0% | |
ATAGGAACTGAAGATGTTAT+TGG | - | chr2_4:20427884-20427903 | None:intergenic | 30.0% | |
AAGTTGAGCATGGTATTTAT+AGG | - | chr2_4:20427902-20427921 | None:intergenic | 30.0% | |
TTTATTAGTGAAGTTGAGCA+TGG | - | chr2_4:20427912-20427931 | None:intergenic | 30.0% | |
ATTGACATTGTTGAAGGAAA+TGG | + | chr2_4:20428109-20428128 | Msa0320140:CDS | 30.0% | |
! | TTGTCTAAAACTATGAAGCA+CGG | - | chr2_4:20428383-20428402 | None:intergenic | 30.0% |
CACTTTGTGTAAATCATACT+TGG | - | chr2_4:20428500-20428519 | None:intergenic | 30.0% | |
CAAGTATGATTTACACAAAG+TGG | + | chr2_4:20428498-20428517 | Msa0320140:intron | 30.0% | |
! | AGTAAGTTTCTTGATGGTTC+CGG | - | chr2_4:20423939-20423958 | None:intergenic | 35.0% |
ATGTGAAAAATTGAAGTGGC+AGG | + | chr2_4:20423981-20424000 | Msa0320140:intron | 35.0% | |
!! | TAACATGATGGACATTCACT+TGG | - | chr2_4:20424193-20424212 | None:intergenic | 35.0% |
GAAACGAATCAATTATGTGC+AGG | + | chr2_4:20424221-20424240 | Msa0320140:intron | 35.0% | |
TGCAGACAATTTAGACTCAA+AGG | - | chr2_4:20424360-20424379 | None:intergenic | 35.0% | |
TTTGAGTCTAAATTGTCTGC+AGG | + | chr2_4:20424359-20424378 | Msa0320140:CDS | 35.0% | |
TTGAGTCTAAATTGTCTGCA+GGG | + | chr2_4:20424360-20424379 | Msa0320140:CDS | 35.0% | |
TTTCACAGTAAGCTTTGCAA+TGG | - | chr2_4:20424399-20424418 | None:intergenic | 35.0% | |
TTGCTTGCTTGCTTTATACA+TGG | + | chr2_4:20424549-20424568 | Msa0320140:intron | 35.0% | |
AACCCAATGAAACAAAACCA+TGG | - | chr2_4:20424891-20424910 | None:intergenic | 35.0% | |
!! | AAAGACAACCTGAAAGCATT+AGG | + | chr2_4:20425154-20425173 | Msa0320140:intron | 35.0% |
! | AAAGCATTAGGAATGGTTGT+GGG | + | chr2_4:20425166-20425185 | Msa0320140:intron | 35.0% |
! | TGTTTCTACTAATGGGTGTT+AGG | - | chr2_4:20425207-20425226 | None:intergenic | 35.0% |
ACCCATTAGTAGAAACATGA+AGG | + | chr2_4:20425210-20425229 | Msa0320140:intron | 35.0% | |
!! | GTCGGTTACAATTTTAATGC+AGG | + | chr2_4:20425245-20425264 | Msa0320140:intron | 35.0% |
CAGGTTTATAACTGATTGGT+TGG | + | chr2_4:20425264-20425283 | Msa0320140:intron | 35.0% | |
AGACATCATGTGAATGATCA+AGG | + | chr2_4:20425507-20425526 | Msa0320140:intron | 35.0% | |
GGATGAAGAATTAGAGATCA+AGG | + | chr2_4:20425528-20425547 | Msa0320140:intron | 35.0% | |
AGAGATCAAGGGTTCTTAAA+AGG | + | chr2_4:20425540-20425559 | Msa0320140:intron | 35.0% | |
!!! | TTTTTTATTTTGGTGGTGGC+CGG | + | chr2_4:20425885-20425904 | Msa0320140:intron | 35.0% |
CATAATATATGTAAGGTCCG+GGG | - | chr2_4:20425919-20425938 | None:intergenic | 35.0% | |
GCATAATATATGTAAGGTCC+GGG | - | chr2_4:20425920-20425939 | None:intergenic | 35.0% | |
AATGAGAAGTTACTCCATGT+TGG | - | chr2_4:20426415-20426434 | None:intergenic | 35.0% | |
ACATGGAGTAACTTCTCATT+TGG | + | chr2_4:20426415-20426434 | Msa0320140:intron | 35.0% | |
GAACTTGGCTAAAATTGAGT+TGG | - | chr2_4:20426497-20426516 | None:intergenic | 35.0% | |
AGACGTTGGATTTAATCCAA+TGG | + | chr2_4:20426924-20426943 | Msa0320140:intron | 35.0% | |
GAGACAAAAAGAGAGGAAAA+AGG | + | chr2_4:20426949-20426968 | Msa0320140:intron | 35.0% | |
GACAAAAAGAGAGGAAAAAG+GGG | + | chr2_4:20426951-20426970 | Msa0320140:intron | 35.0% | |
ATCAAACCACAATGCTACAA+CGG | + | chr2_4:20427096-20427115 | Msa0320140:intron | 35.0% | |
! | TAGTGGTTAACATAATGGGA+CGG | + | chr2_4:20427146-20427165 | Msa0320140:intron | 35.0% |
TATGCTAACAAGTGCTCTAA+GGG | - | chr2_4:20427400-20427419 | None:intergenic | 35.0% | |
TTATGCTAACAAGTGCTCTA+AGG | - | chr2_4:20427401-20427420 | None:intergenic | 35.0% | |
GTGTGCATAGTATTAATTGG+AGG | - | chr2_4:20427600-20427619 | None:intergenic | 35.0% | |
!! | TTCAAAATGAGTGTCGCTTT+AGG | - | chr2_4:20427733-20427752 | None:intergenic | 35.0% |
!! | AAGCGACACTCATTTTGAAA+CGG | + | chr2_4:20427734-20427753 | Msa0320140:intron | 35.0% |
ATGAATAATTCCAGGTCCTT+AGG | - | chr2_4:20427840-20427859 | None:intergenic | 35.0% | |
GAACTGAAGATGTTATTGGA+TGG | - | chr2_4:20427880-20427899 | None:intergenic | 35.0% | |
TTCACTAATAAACCACAGCT+AGG | + | chr2_4:20427920-20427939 | Msa0320140:intron | 35.0% | |
TGATGACATCAACAACCTTT+GGG | - | chr2_4:20428084-20428103 | None:intergenic | 35.0% | |
! | TTGATGACATCAACAACCTT+TGG | - | chr2_4:20428085-20428104 | None:intergenic | 35.0% |
AACGAAAGTGAGTTTCTTGA+TGG | - | chr2_4:20428146-20428165 | None:intergenic | 35.0% | |
AAGAAACTCACTTTCGTTGA+AGG | + | chr2_4:20428148-20428167 | Msa0320140:CDS | 35.0% | |
ATGAATCTATGACATGCAGA+TGG | + | chr2_4:20428469-20428488 | Msa0320140:intron | 35.0% | |
! | TGATTTACACAAAGTGGACT+TGG | + | chr2_4:20428504-20428523 | Msa0320140:intron | 35.0% |
! | TTTGAAGCTAAATTGTCTGC+AGG | + | chr2_4:20428604-20428623 | Msa0320140:CDS | 35.0% |
TTTCACACTAAGCTTTGCAA+TGG | - | chr2_4:20428644-20428663 | None:intergenic | 35.0% | |
AGTGTGAAATACTTCACCAA+AGG | + | chr2_4:20428655-20428674 | Msa0320140:CDS | 35.0% | |
CATGGGTGTATTCAACTTTG+AGG | + | chr2_4:20423787-20423806 | Msa0320140:exon | 40.0% | |
! | AGAGCTTTGTAAAGTCTAGC+AGG | - | chr2_4:20423836-20423855 | None:intergenic | 40.0% |
TGGATGGCATCAATAACCTT+TGG | - | chr2_4:20423884-20423903 | None:intergenic | 40.0% | |
GAAATTGTTGAAGGAAACGG+TGG | + | chr2_4:20423911-20423930 | Msa0320140:CDS | 40.0% | |
GACATTCACTTGGTTCAACT+AGG | - | chr2_4:20424183-20424202 | None:intergenic | 40.0% | |
ACGAATCAATTATGTGCAGG+TGG | + | chr2_4:20424224-20424243 | Msa0320140:intron | 40.0% | |
GCTTACAACTACAGCATAGT+TGG | + | chr2_4:20424299-20424318 | Msa0320140:CDS | 40.0% | |
TACAACTACAGCATAGTTGG+TGG | + | chr2_4:20424302-20424321 | Msa0320140:CDS | 40.0% | |
ACCAAGTGAAGAGGAAATCA+AGG | + | chr2_4:20424442-20424461 | Msa0320140:CDS | 40.0% | |
CCAAGTGAAGAGGAAATCAA+GGG | + | chr2_4:20424443-20424462 | Msa0320140:CDS | 40.0% | |
CAATCTCACACTTGAGCAAA+AGG | - | chr2_4:20424641-20424660 | None:intergenic | 40.0% | |
! | CTGATTTGTGCTTCTTGCAA+TGG | - | chr2_4:20424933-20424952 | None:intergenic | 40.0% |
!! | CAACCTGAAAGCATTAGGAA+TGG | + | chr2_4:20425159-20425178 | Msa0320140:intron | 40.0% |
CAACCATTCCTAATGCTTTC+AGG | - | chr2_4:20425165-20425184 | None:intergenic | 40.0% | |
!! | GAAAGCATTAGGAATGGTTG+TGG | + | chr2_4:20425165-20425184 | Msa0320140:intron | 40.0% |
! | TCAAGTTCCTAGGAGTTTTC+AGG | + | chr2_4:20425598-20425617 | Msa0320140:intron | 40.0% |
TCTTTCACCTGAAAACTCCT+AGG | - | chr2_4:20425608-20425627 | None:intergenic | 40.0% | |
AACGTAAGAAATCGCACATG+AGG | + | chr2_4:20425648-20425667 | Msa0320140:intron | 40.0% | |
ACGTAAGAAATCGCACATGA+GGG | + | chr2_4:20425649-20425668 | Msa0320140:intron | 40.0% | |
ACCAAACTAAGGACACTTTC+AGG | - | chr2_4:20425695-20425714 | None:intergenic | 40.0% | |
GTTAACACTAGCGAAAAGAC+GGG | - | chr2_4:20425850-20425869 | None:intergenic | 40.0% | |
GGTTAACACTAGCGAAAAGA+CGG | - | chr2_4:20425851-20425870 | None:intergenic | 40.0% | |
!!! | TTTTTATTTTGGTGGTGGCC+GGG | + | chr2_4:20425886-20425905 | Msa0320140:intron | 40.0% |
GTCAAAGCTGAATACCAACA+TGG | + | chr2_4:20426398-20426417 | Msa0320140:intron | 40.0% | |
CGTTGGATTTAATCCAATGG+TGG | + | chr2_4:20426927-20426946 | Msa0320140:intron | 40.0% | |
! | TCTCTTTTTGTCTCCACCAT+TGG | - | chr2_4:20426943-20426962 | None:intergenic | 40.0% |
! | AATGGTGGAGACAAAAAGAG+AGG | + | chr2_4:20426942-20426961 | Msa0320140:intron | 40.0% |
! | GCTACAACGGACATACATTT+TGG | + | chr2_4:20427109-20427128 | Msa0320140:intron | 40.0% |
!!! | GACACTCATTTTGAAACGGA+GGG | - | chr2_4:20427738-20427757 | None:intergenic | 40.0% |
!!! | TGACACTCATTTTGAAACGG+AGG | - | chr2_4:20427496-20427515 | None:intergenic | 40.0% |
!!! | GACACTCATTTTGAAACGGA+TGG | + | chr2_4:20427738-20427757 | Msa0320140:intron | 40.0% |
AAAAAAATGGCCTAAGGACC+TGG | + | chr2_4:20427827-20427846 | Msa0320140:intron | 40.0% | |
! | TTAAGTTGTTTGCCTAGCTG+TGG | - | chr2_4:20427935-20427954 | None:intergenic | 40.0% |
!! | CATGGGTGTCATCAATTTTG+AGG | + | chr2_4:20427988-20428007 | Msa0320140:intron | 40.0% |
! | AAAGCTTTGTGAAGTGTAGC+AGG | - | chr2_4:20428037-20428056 | None:intergenic | 40.0% |
!! | CATCAACAACCTTTGGGATA+AGG | - | chr2_4:20428078-20428097 | None:intergenic | 40.0% |
GACATTGTTGAAGGAAATGG+TGG | + | chr2_4:20428112-20428131 | Msa0320140:CDS | 40.0% | |
! | AGTGAGTTTCTTGATGGTTC+CGG | - | chr2_4:20428140-20428159 | None:intergenic | 40.0% |
ACTTGGTAGATGATGCTAAC+TGG | + | chr2_4:20428521-20428540 | Msa0320140:intron | 40.0% | |
CTTGGTAGATGATGCTAACT+GGG | + | chr2_4:20428522-20428541 | Msa0320140:intron | 40.0% | |
GCTTACAACTACAGCATAGT+TGG | + | chr2_4:20424299-20424318 | Msa0320140:CDS | 40.0% | |
TACAACTACAGCATAGTTGG+AGG | + | chr2_4:20424302-20424321 | Msa0320140:CDS | 40.0% | |
GAAATCTTCTCTACTGTGTC+TGG | - | chr2_4:20428583-20428602 | None:intergenic | 40.0% | |
TTTGCAATGGATCCTCCATT+CGG | - | chr2_4:20428631-20428650 | None:intergenic | 40.0% | |
!! | TAAGGGTGATGGTCTTTTCA+AGG | + | chr2_4:20428720-20428739 | Msa0320140:CDS | 40.0% |
AGCAGGAGCTACAATAGATG+TGG | - | chr2_4:20423819-20423838 | None:intergenic | 45.0% | |
!! | AACTACAGCATAGTTGGTGG+TGG | + | chr2_4:20424305-20424324 | Msa0320140:CDS | 45.0% |
TTTGCAATGGATCCTCCATC+TGG | - | chr2_4:20424386-20424405 | None:intergenic | 45.0% | |
CCCTTGATTTCCTCTTCACT+TGG | - | chr2_4:20424446-20424465 | None:intergenic | 45.0% | |
AGTGAAGAGGAAATCAAGGG+TGG | + | chr2_4:20424446-20424465 | Msa0320140:CDS | 45.0% | |
AAATCAAGGGTGGCAAAGCT+AGG | + | chr2_4:20424456-20424475 | Msa0320140:CDS | 45.0% | |
AATCAAGGGTGGCAAAGCTA+GGG | + | chr2_4:20424457-20424476 | Msa0320140:CDS | 45.0% | |
!! | TAGGGGTGATGGTCTTTTCA+AGG | + | chr2_4:20424475-20424494 | Msa0320140:intron | 45.0% |
!! | GGTCTTTTCAAGGCTCTTGA+AGG | + | chr2_4:20424485-20424504 | Msa0320140:intron | 45.0% |
! | GGCTCTTGAAGGTTACGTTT+TGG | + | chr2_4:20424496-20424515 | Msa0320140:intron | 45.0% |
AGGAATGGTTGTGGGAATTG+TGG | + | chr2_4:20425174-20425193 | Msa0320140:intron | 45.0% | |
CCTATGGAGTTGCATGATCT+TGG | - | chr2_4:20425441-20425460 | None:intergenic | 45.0% | |
CCAAGATCATGCAACTCCAT+AGG | + | chr2_4:20425438-20425457 | Msa0320140:intron | 45.0% | |
CGTAAGAAATCGCACATGAG+GGG | + | chr2_4:20425650-20425669 | Msa0320140:intron | 45.0% | |
TAAGGACACTTTCAGGCGTA+GGG | - | chr2_4:20425688-20425707 | None:intergenic | 45.0% | |
!! | GCCTGAAAGTGTCCTTAGTT+TGG | + | chr2_4:20425691-20425710 | Msa0320140:intron | 45.0% |
!!! | TTTTATTTTGGTGGTGGCCG+GGG | + | chr2_4:20425887-20425906 | Msa0320140:intron | 45.0% |
AAAGAGAGGAAAAAGGGGCA+AGG | + | chr2_4:20426956-20426975 | Msa0320140:intron | 45.0% | |
AGGACTGGAAATTGCTCCAA+AGG | - | chr2_4:20427000-20427019 | None:intergenic | 45.0% | |
GTATGTCCGTTGTAGCATTG+TGG | - | chr2_4:20427105-20427124 | None:intergenic | 45.0% | |
!! | CTAACAAGTGCTCTAAGGGA+GGG | - | chr2_4:20427396-20427415 | None:intergenic | 45.0% |
GTTATTGGATGGCACGTTAG+AGG | - | chr2_4:20427869-20427888 | None:intergenic | 45.0% | |
AAGTGTAGCAGGAGCTACAA+TGG | - | chr2_4:20428026-20428045 | None:intergenic | 45.0% | |
TGCTGACAACCTTATCCCAA+AGG | + | chr2_4:20428066-20428085 | Msa0320140:CDS | 45.0% | |
! | TTGTGTCGATGTCGAATGTC+AGG | - | chr2_4:20428284-20428303 | None:intergenic | 45.0% |
TGATGTGTCCGTGTTGTGAT+TGG | + | chr2_4:20428354-20428373 | Msa0320140:intron | 45.0% | |
AAATTGTCTGCAGGTCCGAA+TGG | + | chr2_4:20428613-20428632 | Msa0320140:CDS | 45.0% | |
ACTAGGAGTAGCATCACCTT+TGG | - | chr2_4:20428674-20428693 | None:intergenic | 45.0% | |
TGATGCTACTCCTAGTGAAG+AGG | + | chr2_4:20428678-20428697 | Msa0320140:CDS | 45.0% | |
CTCTTGAGTTCCTCTTCACT+AGG | - | chr2_4:20428691-20428710 | None:intergenic | 45.0% | |
AGTGAAGAGGAACTCAAGAG+TGG | + | chr2_4:20428691-20428710 | Msa0320140:CDS | 45.0% | |
ACTCAAGAGTGGCAAAGCTA+AGG | + | chr2_4:20428702-20428721 | Msa0320140:CDS | 45.0% | |
CTCAAGAGTGGCAAAGCTAA+GGG | + | chr2_4:20428703-20428722 | Msa0320140:CDS | 45.0% | |
!! | TATTATTATAATTTATTGAA+GGG | - | chr2_4:20424682-20424701 | None:intergenic | 5.0% |
!!! | TTTTAAAAAATTAAATTACA+CGG | - | chr2_4:20426028-20426047 | None:intergenic | 5.0% |
!! | TACAGCATAGTTGGTGGTGG+TGG | + | chr2_4:20424308-20424327 | Msa0320140:CDS | 50.0% |
GAGATCTTCTCCACTGTGTC+TGG | - | chr2_4:20424338-20424357 | None:intergenic | 50.0% | |
AAATTGTCTGCAGGGCCAGA+TGG | + | chr2_4:20424368-20424387 | Msa0320140:CDS | 50.0% | |
TGATGCTGCACCAAGTGAAG+AGG | + | chr2_4:20424433-20424452 | Msa0320140:CDS | 50.0% | |
ATCAAGGGTGGCAAAGCTAG+GGG | + | chr2_4:20424458-20424477 | Msa0320140:CDS | 50.0% | |
CTAAGGACACTTTCAGGCGT+AGG | - | chr2_4:20425689-20425708 | None:intergenic | 50.0% | |
TCATAACTGCGCAGGAGAGA+TGG | - | chr2_4:20426905-20426924 | None:intergenic | 50.0% | |
AGGAAAAAGGGGCAAGGAGA+GGG | + | chr2_4:20426962-20426981 | Msa0320140:intron | 50.0% | |
AGGGAAATGTCCACTGCCTT+TGG | + | chr2_4:20426981-20427000 | Msa0320140:intron | 50.0% | |
GGAAATTGCTCCAAAGGCAG+TGG | - | chr2_4:20426994-20427013 | None:intergenic | 50.0% | |
!! | GCTAACAAGTGCTCTAAGGG+AGG | - | chr2_4:20427397-20427416 | None:intergenic | 50.0% |
TGTAGCAGGAGCTACAATGG+AGG | - | chr2_4:20428023-20428042 | None:intergenic | 50.0% | |
GTTGAAGGAAATGGTGGCTC+CGG | + | chr2_4:20428118-20428137 | Msa0320140:CDS | 50.0% | |
!! | CAGAAGTGTCGGTGCAACTT+AGG | - | chr2_4:20428248-20428267 | None:intergenic | 50.0% |
! | GCACCGACACTTCTGATTGA+CGG | + | chr2_4:20428253-20428272 | Msa0320140:intron | 50.0% |
! | GCACCGTCAATCAGAAGTGT+CGG | - | chr2_4:20428259-20428278 | None:intergenic | 50.0% |
CACGGACACCAATCACAACA+CGG | - | chr2_4:20428365-20428384 | None:intergenic | 50.0% | |
AGTGGCAAAGCTAAGGGTGA+TGG | + | chr2_4:20428709-20428728 | Msa0320140:CDS | 50.0% | |
!! | TGGTCTTTTCAAGGCCCTTG+AGG | + | chr2_4:20428729-20428748 | Msa0320140:CDS | 50.0% |
!! | GGTCTTTTCAAGGCCCTTGA+GGG | + | chr2_4:20428730-20428749 | Msa0320140:CDS | 50.0% |
GGCCAAACAGTAACCCTCAA+GGG | - | chr2_4:20428746-20428765 | None:intergenic | 50.0% | |
TGGCCAAACAGTAACCCTCA+AGG | - | chr2_4:20428747-20428766 | None:intergenic | 50.0% | |
GTTGAAGGAAACGGTGGTGC+CGG | + | chr2_4:20423917-20423936 | Msa0320140:CDS | 55.0% | |
!! | TGGTGGACTTCCAGACACAG+TGG | + | chr2_4:20424325-20424344 | Msa0320140:CDS | 55.0% |
GGCAGTAGAGAAGCAGCATG+AGG | - | chr2_4:20426884-20426903 | None:intergenic | 55.0% | |
CCAACGTCTCATAACTGCGC+AGG | - | chr2_4:20426913-20426932 | None:intergenic | 55.0% | |
CCTGCGCAGTTATGAGACGT+TGG | + | chr2_4:20426910-20426929 | Msa0320140:intron | 55.0% | |
GAGGAAAAAGGGGCAAGGAG+AGG | + | chr2_4:20426961-20426980 | Msa0320140:intron | 55.0% | |
AGCAGGAGCTACAATGGAGG+TGG | - | chr2_4:20428020-20428039 | None:intergenic | 55.0% | |
TTGTCTGCAGGTCCGAATGG+AGG | + | chr2_4:20428616-20428635 | Msa0320140:CDS | 55.0% | |
GGCCCTTGAGGGTTACTGTT+TGG | + | chr2_4:20428741-20428760 | Msa0320140:CDS | 55.0% | |
TTGTCTGCAGGGCCAGATGG+AGG | + | chr2_4:20424371-20424390 | Msa0320140:CDS | 60.0% | |
GGTGGCAAAGCTAGGGGTGA+TGG | + | chr2_4:20424464-20424483 | Msa0320140:CDS | 60.0% | |
TTTCAGGCGTAGGGAGCCAG+AGG | - | chr2_4:20425679-20425698 | None:intergenic | 60.0% | |
AAGGTCCGGGGTTTGAACCC+CGG | - | chr2_4:20425907-20425926 | None:intergenic | 60.0% | |
CGCACATGAGGGGTTGCCTC+TGG | + | chr2_4:20425660-20425679 | Msa0320140:intron | 65.0% | |
GGTGGCCGGGGTTCAAACCC+CGG | + | chr2_4:20425899-20425918 | Msa0320140:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_4 | gene | 20423739 | 20428783 | 20423739 | ID=Msa0320140;Name=Msa0320140 |
chr2_4 | mRNA | 20423739 | 20428783 | 20423739 | ID=Msa0320140-mRNA-1;Parent=Msa0320140;Name=Msa0320140-mRNA-1;_AED=0.18;_eAED=0.18;_QI=49|0.33|0.25|1|0.33|0.25|4|0|277 |
chr2_4 | exon | 20423739 | 20423968 | 20423739 | ID=Msa0320140-mRNA-1:exon:7521;Parent=Msa0320140-mRNA-1 |
chr2_4 | exon | 20424243 | 20424485 | 20424243 | ID=Msa0320140-mRNA-1:exon:7522;Parent=Msa0320140-mRNA-1 |
chr2_4 | exon | 20428014 | 20428169 | 20428014 | ID=Msa0320140-mRNA-1:exon:7523;Parent=Msa0320140-mRNA-1 |
chr2_4 | exon | 20428530 | 20428783 | 20428530 | ID=Msa0320140-mRNA-1:exon:7524;Parent=Msa0320140-mRNA-1 |
chr2_4 | five_prime_UTR | 20423739 | 20423787 | 20423739 | ID=Msa0320140-mRNA-1:five_prime_utr;Parent=Msa0320140-mRNA-1 |
chr2_4 | CDS | 20423788 | 20423968 | 20423788 | ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1 |
chr2_4 | CDS | 20424243 | 20424485 | 20424243 | ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1 |
chr2_4 | CDS | 20428014 | 20428169 | 20428014 | ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1 |
chr2_4 | CDS | 20428530 | 20428783 | 20428530 | ID=Msa0320140-mRNA-1:cds;Parent=Msa0320140-mRNA-1 |
Gene Sequence |
Protein sequence |