Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807160 | XP_024639524.1 | 94.223 | 502 | 27 | 2 | 1 | 500 | 1 | 502 | 0.0 | 968 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807160 | sp|F4I2H7|TPX2_ARATH | 42.786 | 201 | 103 | 7 | 240 | 430 | 312 | 510 | 1.70e-33 | 138 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807160 | A0A396HK57 | 94.223 | 502 | 27 | 2 | 1 | 500 | 1 | 502 | 0.0 | 968 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0018920 | Msa0807160 | 0.818379 | 2.020926e-52 | -8.615850e-47 |
| Msa0020540 | Msa0807160 | 0.809493 | 1.841584e-50 | -8.615850e-47 |
| Msa0032980 | Msa0807160 | 0.821059 | 4.936846e-53 | -8.615850e-47 |
| Msa0067060 | Msa0807160 | 0.803019 | 4.256600e-49 | -8.615850e-47 |
| Msa0078130 | Msa0807160 | 0.800474 | 1.417317e-48 | -8.615850e-47 |
| Msa0091350 | Msa0807160 | 0.832636 | 8.440702e-56 | -8.615850e-47 |
| Msa0106630 | Msa0807160 | 0.813222 | 2.855379e-51 | -8.615850e-47 |
| Msa0112670 | Msa0807160 | 0.812564 | 3.978752e-51 | -8.615850e-47 |
| Msa0608350 | Msa0807160 | 0.815617 | 8.433816e-52 | -8.615850e-47 |
| Msa0613580 | Msa0807160 | 0.805326 | 1.409254e-49 | -8.615850e-47 |
| Msa0620500 | Msa0807160 | 0.807703 | 4.440575e-50 | -8.615850e-47 |
| Msa0648760 | Msa0807160 | 0.817353 | 3.446230e-52 | -8.615850e-47 |
| Msa0654740 | Msa0807160 | 0.817432 | 3.308242e-52 | -8.615850e-47 |
| Msa0691270 | Msa0807160 | 0.824808 | 6.604854e-54 | -8.615850e-47 |
| Msa0713920 | Msa0807160 | 0.804354 | 2.249410e-49 | -8.615850e-47 |
| Msa0717900 | Msa0807160 | 0.830252 | 3.260186e-55 | -8.615850e-47 |
| Msa0753550 | Msa0807160 | 0.905553 | 3.803003e-80 | -8.615850e-47 |
| Msa0807160 | Msa0816080 | 0.806380 | 8.462046e-50 | -8.615850e-47 |
| Msa0807160 | Msa0817360 | 0.806189 | 9.282496e-50 | -8.615850e-47 |
| Msa0807160 | Msa0833140 | 0.909405 | 5.909935e-82 | -8.615850e-47 |
| Msa0807160 | Msa0857800 | 0.807524 | 4.846034e-50 | -8.615850e-47 |
| Msa0807160 | Msa0857890 | 0.811326 | 7.403941e-51 | -8.615850e-47 |
| Msa0807160 | Msa0879920 | 0.801369 | 9.299703e-49 | -8.615850e-47 |
| Msa0807160 | Msa0989370 | 0.824485 | 7.867768e-54 | -8.615850e-47 |
| Msa0807160 | Msa1060900 | 0.822310 | 2.536880e-53 | -8.615850e-47 |
| Msa0807160 | Msa1078860 | 0.813628 | 2.324466e-51 | -8.615850e-47 |
| Msa0807160 | Msa1078990 | 0.806510 | 7.944701e-50 | -8.615850e-47 |
| Msa0807160 | Msa1169170 | 0.810857 | 9.356190e-51 | -8.615850e-47 |
| Msa0807160 | Msa1169690 | 0.806574 | 7.699690e-50 | -8.615850e-47 |
| Msa0807160 | Msa1183740 | 0.801756 | 7.747938e-49 | -8.615850e-47 |
| Msa0807160 | Msa1213830 | 0.820895 | 5.386382e-53 | -8.615850e-47 |
| Msa0807160 | Msa1214350 | 0.817392 | 3.377984e-52 | -8.615850e-47 |
| Msa0807160 | Msa1215980 | 0.807727 | 4.388564e-50 | -8.615850e-47 |
| Msa0807160 | Msa1219770 | 0.801705 | 7.937938e-49 | -8.615850e-47 |
| Msa0807160 | Msa1252790 | 0.822093 | 2.848958e-53 | -8.615850e-47 |
| Msa0807160 | Msa1254540 | 0.803067 | 4.160587e-49 | -8.615850e-47 |
| Msa0807160 | Msa1261050 | 0.810690 | 1.016851e-50 | -8.615850e-47 |
| Msa0807160 | Msa1263740 | 0.818141 | 2.288200e-52 | -8.615850e-47 |
| Msa0807160 | Msa1263780 | 0.822375 | 2.449803e-53 | -8.615850e-47 |
| Msa0807160 | Msa1279120 | 0.817614 | 3.009882e-52 | -8.615850e-47 |
| Msa0807160 | Msa1294460 | 0.817548 | 3.114667e-52 | -8.615850e-47 |
| Msa0807160 | Msa1294790 | 0.806357 | 8.555161e-50 | -8.615850e-47 |
| Msa0807160 | Msa1300460 | 0.816557 | 5.201686e-52 | -8.615850e-47 |
| Msa0807160 | Msa1305920 | 0.825855 | 3.733745e-54 | -8.615850e-47 |
| Msa0807160 | Msa1338210 | 0.801513 | 8.690013e-49 | -8.615850e-47 |
| Msa0807160 | Msa1339170 | 0.803641 | 3.164562e-49 | -8.615850e-47 |
| Msa0807160 | Msa1387500 | 0.807199 | 5.679543e-50 | -8.615850e-47 |
| Msa0807160 | Msa1406720 | 0.807329 | 5.330176e-50 | -8.615850e-47 |
| Msa0127340 | Msa0807160 | 0.829464 | 5.071949e-55 | -8.615850e-47 |
| Msa0140380 | Msa0807160 | 0.801271 | 9.741130e-49 | -8.615850e-47 |
| Msa0153210 | Msa0807160 | 0.810160 | 1.323622e-50 | -8.615850e-47 |
| Msa0159590 | Msa0807160 | 0.814205 | 1.734905e-51 | -8.615850e-47 |
| Msa0165830 | Msa0807160 | 0.818145 | 2.283882e-52 | -8.615850e-47 |
| Msa0170070 | Msa0807160 | 0.826980 | 2.013551e-54 | -8.615850e-47 |
| Msa0204970 | Msa0807160 | 0.805919 | 1.057756e-49 | -8.615850e-47 |
| Msa0232760 | Msa0807160 | 0.803058 | 4.177739e-49 | -8.615850e-47 |
| Msa0368860 | Msa0807160 | 0.806459 | 8.142440e-50 | -8.615850e-47 |
| Msa0373170 | Msa0807160 | 0.827111 | 1.873901e-54 | -8.615850e-47 |
| Msa0383000 | Msa0807160 | 0.800140 | 1.657327e-48 | -8.615850e-47 |
| Msa0412130 | Msa0807160 | 0.829766 | 4.282940e-55 | -8.615850e-47 |
| Msa0416160 | Msa0807160 | 0.811681 | 6.199320e-51 | -8.615850e-47 |
| Msa0421750 | Msa0807160 | 0.843806 | 1.117104e-58 | -8.615850e-47 |
| Msa0433760 | Msa0807160 | 0.809049 | 2.292909e-50 | -8.615850e-47 |
| Msa0461550 | Msa0807160 | 0.824120 | 9.585570e-54 | -8.615850e-47 |
| Msa0462780 | Msa0807160 | 0.812413 | 4.293199e-51 | -8.615850e-47 |
| Msa0466520 | Msa0807160 | 0.816511 | 5.326952e-52 | -8.615850e-47 |
| Msa0467690 | Msa0807160 | 0.824229 | 9.039040e-54 | -8.615850e-47 |
| Msa0477630 | Msa0807160 | 0.801743 | 7.796931e-49 | -8.615850e-47 |
| Msa0281540 | Msa0807160 | 0.800863 | 1.180345e-48 | -8.615850e-47 |
| Msa0320580 | Msa0807160 | 0.817958 | 2.516697e-52 | -8.615850e-47 |
| Msa0344110 | Msa0807160 | 0.814433 | 1.544398e-51 | -8.615850e-47 |
| Msa0507810 | Msa0807160 | 0.802922 | 4.457543e-49 | -8.615850e-47 |
| Msa0507920 | Msa0807160 | 0.811046 | 8.516257e-51 | -8.615850e-47 |
| Msa0510680 | Msa0807160 | 0.805768 | 1.138008e-49 | -8.615850e-47 |
| Msa0514020 | Msa0807160 | 0.822862 | 1.887498e-53 | -8.615850e-47 |
| Msa0521680 | Msa0807160 | 0.813205 | 2.879075e-51 | -8.615850e-47 |
| Msa0527850 | Msa0807160 | 0.814301 | 1.652138e-51 | -8.615850e-47 |
| Msa0554300 | Msa0807160 | 0.805181 | 1.511006e-49 | -8.615850e-47 |
| Msa0561560 | Msa0807160 | 0.805570 | 1.252584e-49 | -8.615850e-47 |
| Msa0563900 | Msa0807160 | 0.821217 | 4.540939e-53 | -8.615850e-47 |
| Msa0572830 | Msa0807160 | 0.806009 | 1.012681e-49 | -8.615850e-47 |
| Msa0582460 | Msa0807160 | 0.805832 | 1.103432e-49 | -8.615850e-47 |
| Msa0586200 | Msa0807160 | 0.807765 | 4.307898e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807160 | MtrunA17_Chr5g0398421 | 94.223 | 502 | 27 | 2 | 1 | 500 | 1 | 502 | 0.0 | 968 |
| Msa0807160 | MtrunA17_Chr4g0056701 | 49.378 | 482 | 200 | 11 | 21 | 500 | 19 | 458 | 2.05e-137 | 404 |
| Msa0807160 | MtrunA17_Chr4g0040361 | 29.020 | 510 | 251 | 16 | 28 | 436 | 16 | 515 | 2.50e-35 | 140 |
| Msa0807160 | MtrunA17_Chr6g0475641 | 35.165 | 273 | 139 | 8 | 21 | 287 | 16 | 256 | 1.96e-32 | 125 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0807160 | AT4G22860.1 | 44.061 | 522 | 237 | 16 | 15 | 500 | 7 | 509 | 2.54e-115 | 350 |
| Msa0807160 | AT4G11990.1 | 42.562 | 484 | 235 | 13 | 15 | 477 | 15 | 476 | 5.35e-99 | 307 |
| Msa0807160 | AT4G22860.2 | 50.416 | 361 | 153 | 9 | 149 | 500 | 158 | 501 | 5.22e-97 | 302 |
| Msa0807160 | AT4G22860.3 | 42.857 | 350 | 163 | 10 | 15 | 336 | 7 | 347 | 4.98e-72 | 233 |
| Msa0807160 | AT1G03780.2 | 42.786 | 201 | 103 | 7 | 240 | 430 | 312 | 510 | 1.51e-34 | 138 |
| Msa0807160 | AT1G03780.3 | 42.786 | 201 | 103 | 7 | 240 | 430 | 312 | 510 | 1.73e-34 | 138 |
| Msa0807160 | AT5G07170.1 | 30.673 | 401 | 207 | 17 | 11 | 402 | 18 | 356 | 6.83e-33 | 129 |
| Msa0807160 | AT5G07170.2 | 33.634 | 333 | 158 | 15 | 11 | 334 | 18 | 296 | 3.19e-32 | 127 |
| Msa0807160 | AT5G62240.1 | 30.408 | 319 | 175 | 9 | 23 | 336 | 15 | 291 | 3.15e-22 | 99.0 |
| Msa0807160 | AT1G03780.1 | 35.714 | 196 | 93 | 8 | 240 | 425 | 312 | 484 | 2.86e-21 | 97.8 |
Find 129 sgRNAs with CRISPR-Local
Find 305 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCAATTGTTCTGCTGTTAA+AGG | 0.182738 | 5_3:+27976013 | None:intergenic |
| TATTGGCCGTGCTTTGAATT+TGG | 0.191392 | 5_3:+27974613 | None:intergenic |
| ATTAGGATTCATACCTTCTT+AGG | 0.212980 | 5_3:+27975257 | None:intergenic |
| CAAGAGCTTACTTGAAATTC+AGG | 0.216104 | 5_3:+27974436 | None:intergenic |
| CTGATTACCTTCTTATTAAA+TGG | 0.255685 | 5_3:+27973723 | None:intergenic |
| ACCTAGTCCTTTGTGCTCTA+TGG | 0.273421 | 5_3:+27974768 | None:intergenic |
| TTCACTCGCATTCACGGAAT+TGG | 0.278574 | 5_3:+27976688 | None:intergenic |
| ATTGGCCGTGCTTTGAATTT+GGG | 0.284854 | 5_3:+27974614 | None:intergenic |
| TTGACTGGGCTCCAGATGTT+AGG | 0.289367 | 5_3:+27972616 | None:intergenic |
| AAGAGTTGTTGGGCACTATT+AGG | 0.297396 | 5_3:+27972001 | None:intergenic |
| TCATACAAAATTACTTTGTT+AGG | 0.303556 | 5_3:-27971951 | Msa0807160:three_prime_UTR |
| GGACCTAAGTTCCACTTTCT+AGG | 0.315104 | 5_3:+27971876 | None:intergenic |
| AACACCAATATCTCCTTTAC+TGG | 0.322420 | 5_3:+27972986 | None:intergenic |
| CACTCTAGGAAGCGTAATCT+TGG | 0.333654 | 5_3:+27974808 | None:intergenic |
| CATGAGAAATTCCTTTCATC+TGG | 0.353106 | 5_3:-27972440 | Msa0807160:CDS |
| CTTTCCAGTAAAGGAGATAT+TGG | 0.359519 | 5_3:-27972990 | Msa0807160:CDS |
| GGTACAACAAGCGCATAAAA+AGG | 0.363755 | 5_3:-27975595 | Msa0807160:CDS |
| GATTAGTGTAGCTAACTCTT+TGG | 0.366736 | 5_3:-27975571 | Msa0807160:CDS |
| TCCTCATTTCAGTGTGTTCA+AGG | 0.380701 | 5_3:-27972568 | Msa0807160:intron |
| ACCTTTAACAGCAGAACAAT+TGG | 0.388644 | 5_3:-27976014 | Msa0807160:CDS |
| GCGGTTTCGAACCAGCGTTC+AGG | 0.397286 | 5_3:+27977019 | None:intergenic |
| CCAGTCAAATAATGGTTCTA+AGG | 0.406510 | 5_3:-27972601 | Msa0807160:CDS |
| GCTTCAGGAACCTGGGAATT+CGG | 0.408413 | 5_3:-27972129 | Msa0807160:intron |
| TCTGGAGCCCAGTCAAATAA+TGG | 0.411765 | 5_3:-27972609 | Msa0807160:CDS |
| CCTTAGAACCATTATTTGAC+TGG | 0.418216 | 5_3:+27972601 | None:intergenic |
| CCCCTCAAATTGTTGGTTCA+AGG | 0.418407 | 5_3:-27975896 | Msa0807160:intron |
| GTCAGTTGGCTAAGCAAAAT+CGG | 0.418493 | 5_3:-27975920 | Msa0807160:CDS |
| TTCCTTTCATCTGGACCAAA+AGG | 0.420779 | 5_3:-27972431 | Msa0807160:intron |
| ACCTTACTAAAGAGGTCAAT+TGG | 0.421892 | 5_3:+27972795 | None:intergenic |
| CATCATTACCTCTTCATAAG+AGG | 0.434508 | 5_3:-27974474 | Msa0807160:CDS |
| TACCAAGCGGCAGAAATTAG+AGG | 0.441976 | 5_3:-27975532 | Msa0807160:CDS |
| AATAATCTAAGAAGAGTTGT+TGG | 0.446232 | 5_3:+27971990 | None:intergenic |
| CACCTTGAACCAACAATTTG+AGG | 0.450794 | 5_3:+27975894 | None:intergenic |
| ACTGAAATGCTTCAGGAACC+TGG | 0.454412 | 5_3:-27972137 | Msa0807160:intron |
| TAATCCAATCCATCATGCTT+TGG | 0.455156 | 5_3:+27973768 | None:intergenic |
| ACCAATTGACCTCTTTAGTA+AGG | 0.458480 | 5_3:-27972796 | Msa0807160:intron |
| TCGAACCAGCGTTCAGGTTG+TGG | 0.460088 | 5_3:+27977025 | None:intergenic |
| CTATGGAATGTTTCTAGCTC+GGG | 0.461630 | 5_3:+27974785 | None:intergenic |
| TGTCCACAAGGCACCTAAGA+AGG | 0.462403 | 5_3:-27975270 | Msa0807160:intron |
| ACCCTCTAATTTCTGCCGCT+TGG | 0.464692 | 5_3:+27975530 | None:intergenic |
| TTCTTCGGTTTCAGCATTTG+CGG | 0.466832 | 5_3:-27976891 | Msa0807160:intron |
| GTTTCTAGCTCGGGCACTCT+AGG | 0.467618 | 5_3:+27974794 | None:intergenic |
| TCCATGCAATGATTCTGATA+AGG | 0.467882 | 5_3:-27974103 | Msa0807160:intron |
| CTGGGAATTCGGTGACTGCC+AGG | 0.469319 | 5_3:-27972118 | Msa0807160:exon |
| AATCAGTTGTCCCTAACATC+TGG | 0.475710 | 5_3:-27972627 | Msa0807160:intron |
| AGCTCGACCATTTAATAAGA+AGG | 0.477019 | 5_3:-27973730 | Msa0807160:intron |
| AGGAAGCGTAATCTTGGGCT+TGG | 0.477041 | 5_3:+27974814 | None:intergenic |
| TCTGCACAGGCCATCTGTGA+TGG | 0.480912 | 5_3:-27973796 | Msa0807160:intron |
| TGACTGGGCTCCAGATGTTA+GGG | 0.481922 | 5_3:+27972617 | None:intergenic |
| GAAATTCAGGCAACCGTGCA+GGG | 0.483025 | 5_3:+27974449 | None:intergenic |
| ACTCCTAGAAAGTGGAACTT+AGG | 0.483398 | 5_3:-27971879 | Msa0807160:three_prime_UTR |
| TGAAATTCAGGCAACCGTGC+AGG | 0.483442 | 5_3:+27974448 | None:intergenic |
| TCTATGGAATGTTTCTAGCT+CGG | 0.489717 | 5_3:+27974784 | None:intergenic |
| GTACAAATACTCCTAGAAAG+TGG | 0.495544 | 5_3:-27971887 | Msa0807160:three_prime_UTR |
| CTCTTATGAAGAGGTAATGA+TGG | 0.501693 | 5_3:+27974475 | None:intergenic |
| TGGTTTCCTGTTTAATGTTG+CGG | 0.504893 | 5_3:+27972961 | None:intergenic |
| GATGGATTGGATTATAGTCA+TGG | 0.504951 | 5_3:-27973759 | Msa0807160:CDS |
| ATGAATTCACCTTACTAAAG+AGG | 0.505144 | 5_3:+27972787 | None:intergenic |
| ACTGAAATGGAAAACAATGT+TGG | 0.505866 | 5_3:-27977187 | Msa0807160:exon |
| CTGCACAGGCCATCTGTGAT+GGG | 0.507509 | 5_3:-27973795 | Msa0807160:intron |
| ATAATCTAAGAAGAGTTGTT+GGG | 0.507543 | 5_3:+27971991 | None:intergenic |
| GTGCAGATACTTTCCAGTAA+AGG | 0.509041 | 5_3:-27972999 | Msa0807160:intron |
| CTTCGATTGTAGTTGTCGCC+TGG | 0.509139 | 5_3:+27972100 | None:intergenic |
| CACCACAGCAGATTTAGACT+TGG | 0.509558 | 5_3:+27975977 | None:intergenic |
| ACCTTGAACCAACAATTTGA+GGG | 0.514030 | 5_3:+27975895 | None:intergenic |
| TGCTCCAAAGCATGATGGAT+TGG | 0.515441 | 5_3:-27973772 | Msa0807160:CDS |
| ACTCTAGGAAGCGTAATCTT+GGG | 0.521083 | 5_3:+27974809 | None:intergenic |
| CTTAGAACCATTATTTGACT+GGG | 0.523082 | 5_3:+27972602 | None:intergenic |
| GAAGCAAGAAATCATGATGA+TGG | 0.523568 | 5_3:-27977158 | Msa0807160:CDS |
| ACCTTGAACACACTGAAATG+AGG | 0.528100 | 5_3:+27972567 | None:intergenic |
| CATCAAAATGTTGTGCAACC+AGG | 0.534171 | 5_3:-27976638 | Msa0807160:intron |
| CTGGCAGTCACCGAATTCCC+AGG | 0.536237 | 5_3:+27972119 | None:intergenic |
| ACCAACTATGCATACCTCCT+TGG | 0.540572 | 5_3:+27972208 | None:intergenic |
| GCAAATTCAGAGAGGGAGTG+AGG | 0.550875 | 5_3:-27972263 | Msa0807160:CDS |
| CTGAAATGCTTCAGGAACCT+GGG | 0.551433 | 5_3:-27972136 | Msa0807160:intron |
| CAAATTCAGAGAGGGAGTGA+GGG | 0.554572 | 5_3:-27972262 | Msa0807160:CDS |
| CTGGTACAATATTGAGTCCA+AGG | 0.554844 | 5_3:-27972225 | Msa0807160:CDS |
| GAGGGTTGCATCAACGAAGC+TGG | 0.554864 | 5_3:-27972244 | Msa0807160:CDS |
| ATACCTTCTTAGGTGCCTTG+TGG | 0.557173 | 5_3:+27975267 | None:intergenic |
| GAGAAAAGCAAATTCAGAGA+GGG | 0.563610 | 5_3:-27972270 | Msa0807160:CDS |
| ACAGGAAACCACTGTGCCAA+TGG | 0.568258 | 5_3:-27972949 | Msa0807160:intron |
| TGGAAAACAATGTTGGAATG+TGG | 0.569916 | 5_3:-27977180 | Msa0807160:CDS |
| TACTAAAGAGGTCAATTGGT+GGG | 0.571250 | 5_3:+27972799 | None:intergenic |
| TCCATAGAGCACAAAGGACT+AGG | 0.572111 | 5_3:-27974769 | Msa0807160:intron |
| ACCTTATCAGAATCATTGCA+TGG | 0.573862 | 5_3:+27974102 | None:intergenic |
| ACGAGAAGGAGGATAAGTTC+CGG | 0.578369 | 5_3:+27976997 | None:intergenic |
| CCATCGGCTCTCTAGTTAGC+CGG | 0.582610 | 5_3:+27972037 | None:intergenic |
| GAACGCTGGTTCGAAACCGC+CGG | 0.587311 | 5_3:-27977016 | Msa0807160:CDS |
| TTAGCCAACTGACTAGCTGT+AGG | 0.588692 | 5_3:+27975930 | None:intergenic |
| AACTTCCACAACCTGAACGC+TGG | 0.589569 | 5_3:-27977030 | Msa0807160:CDS |
| AACACACTGAAATGAGGACC+TGG | 0.592683 | 5_3:+27972573 | None:intergenic |
| AAGTGGAACTTAGGTCCACT+CGG | 0.593531 | 5_3:-27971870 | Msa0807160:three_prime_UTR |
| AACAGCAGAACAATTGGCGA+AGG | 0.595460 | 5_3:-27976008 | Msa0807160:CDS |
| AGTGGAACTTAGGTCCACTC+GGG | 0.599502 | 5_3:-27971869 | Msa0807160:three_prime_UTR |
| ATAGAATCAGTAATTTGAGA+AGG | 0.607446 | 5_3:-27973893 | Msa0807160:intron |
| TTCATAAGAGGACCCCTGCA+CGG | 0.608163 | 5_3:-27974462 | Msa0807160:CDS |
| TTTGGAGCACCCATCACAGA+TGG | 0.610704 | 5_3:+27973786 | None:intergenic |
| ATGGGTGCTCCAAAGCATGA+TGG | 0.613189 | 5_3:-27973777 | Msa0807160:CDS |
| AGGTTTAGGATGAAGATGAA+CGG | 0.614262 | 5_3:+27976823 | None:intergenic |
| ACCAAGCGGCAGAAATTAGA+GGG | 0.614941 | 5_3:-27975531 | Msa0807160:CDS |
| TCACCTCAAAACATCGGAGA+GGG | 0.615996 | 5_3:-27974163 | Msa0807160:CDS |
| GAAACCTACAGCTAGTCAGT+TGG | 0.618966 | 5_3:-27975934 | Msa0807160:CDS |
| AGAGGGTGGTCTCTTGTGCA+AGG | 0.625070 | 5_3:-27975514 | Msa0807160:intron |
| CTGTACCCAAATTCAAAGCA+CGG | 0.625486 | 5_3:-27974619 | Msa0807160:CDS |
| GGAATTTCACCTCAAAACAT+CGG | 0.626340 | 5_3:-27974169 | Msa0807160:CDS |
| TAGCCGGCAAAATTCTGTTG+CGG | 0.626545 | 5_3:+27972053 | None:intergenic |
| TTACTAAAGAGGTCAATTGG+TGG | 0.627296 | 5_3:+27972798 | None:intergenic |
| GCAGGGGTCCTCTTATGAAG+AGG | 0.627687 | 5_3:+27974466 | None:intergenic |
| TGAGAGAACGAACGAGAAGG+AGG | 0.631453 | 5_3:+27976986 | None:intergenic |
| GTAGCTGCTGATCAAAACGC+TGG | 0.635512 | 5_3:-27974842 | Msa0807160:CDS |
| AAATTCAGGCAACCGTGCAG+GGG | 0.635837 | 5_3:+27974450 | None:intergenic |
| TTCCAAGTCTAAATCTGCTG+TGG | 0.647649 | 5_3:-27975979 | Msa0807160:CDS |
| AATGGTTCTAAGGTGAAACC+AGG | 0.650675 | 5_3:-27972591 | Msa0807160:CDS |
| AAAATGTCTGGATTATTCGG+AGG | 0.654029 | 5_3:-27976665 | Msa0807160:CDS |
| CCAACTCACCATTGGCACAG+TGG | 0.655857 | 5_3:+27972941 | None:intergenic |
| CTTGAACCAACAATTTGAGG+GGG | 0.660413 | 5_3:+27975897 | None:intergenic |
| CCTTGAACCAACAATTTGAG+GGG | 0.664796 | 5_3:+27975896 | None:intergenic |
| TAGAGAGTCAATCTACCAAG+CGG | 0.667246 | 5_3:-27975545 | Msa0807160:CDS |
| TGTAGCAGATGTGTGCTGCA+TGG | 0.674174 | 5_3:+27974140 | None:intergenic |
| GGAGAAAAGCAAATTCAGAG+AGG | 0.675935 | 5_3:-27972271 | Msa0807160:CDS |
| TGTGATGAATCAAGAAGTCG+CGG | 0.680471 | 5_3:-27976861 | Msa0807160:CDS |
| AAACATTCCATAGAGCACAA+AGG | 0.688582 | 5_3:-27974775 | Msa0807160:CDS |
| GTGGAACTTAGGTCCACTCG+GGG | 0.694103 | 5_3:-27971868 | Msa0807160:three_prime_UTR |
| GCAGTGAAATCGAAGAAGCG+AGG | 0.694547 | 5_3:+27977076 | None:intergenic |
| TTCACCTCAAAACATCGGAG+AGG | 0.699050 | 5_3:-27974164 | Msa0807160:CDS |
| AAGCGGCAGAAATTAGAGGG+TGG | 0.721444 | 5_3:-27975528 | Msa0807160:CDS |
| AGAAGGAGGATAAGTTCCGG+CGG | 0.732383 | 5_3:+27977000 | None:intergenic |
| TGAAGCAGAACACTTGACAG+TGG | 0.737347 | 5_3:-27974642 | Msa0807160:CDS |
| GTACAATATTGAGTCCAAGG+AGG | 0.778248 | 5_3:-27972222 | Msa0807160:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTAATATCTAATATTAATA+AGG | + | chr5_3:27973849-27973868 | None:intergenic | 10.0% |
| !!! | TAAATCTTTTTATTTTTTGA+AGG | + | chr5_3:27975684-27975703 | None:intergenic | 10.0% |
| !! | TGGATTATTAGAATTAAAAT+TGG | - | chr5_3:27973602-27973621 | Msa0807160:intron | 15.0% |
| !! | AATATGATATATATGGTAAT+GGG | + | chr5_3:27973927-27973946 | None:intergenic | 15.0% |
| !! | TAGATAAATTTAGTATTGTT+AGG | - | chr5_3:27974496-27974515 | Msa0807160:intron | 15.0% |
| !! | AATGTAGTTCAATATAAATT+GGG | + | chr5_3:27975072-27975091 | None:intergenic | 15.0% |
| !!! | TAAATTTAATGTGAGAATTT+TGG | - | chr5_3:27976535-27976554 | Msa0807160:intron | 15.0% |
| !!! | ATATTGAGTTATTTCTTTTT+GGG | - | chr5_3:27976581-27976600 | Msa0807160:intron | 15.0% |
| !!! | TGGATATTGTTATATTTTTA+AGG | + | chr5_3:27976674-27976693 | None:intergenic | 15.0% |
| !! | TTATATTTATCGTTGTTCTT+CGG | - | chr5_3:27972157-27972176 | Msa0807160:intron | 20.0% |
| !!! | TTTTCAAATCCTAATCTATA+TGG | - | chr5_3:27972555-27972574 | Msa0807160:intron | 20.0% |
| !! | ATCAGAAAAGAAAAAAAGAA+GGG | + | chr5_3:27972895-27972914 | None:intergenic | 20.0% |
| !! | TATCAGAAAAGAAAAAAAGA+AGG | + | chr5_3:27972896-27972915 | None:intergenic | 20.0% |
| !! | AAAGACATGAACTATTATTA+TGG | - | chr5_3:27973226-27973245 | Msa0807160:intron | 20.0% |
| !! | TAACTTTCCATTTAATCTAA+TGG | + | chr5_3:27973663-27973682 | None:intergenic | 20.0% |
| !! | CAATATGATATATATGGTAA+TGG | + | chr5_3:27973928-27973947 | None:intergenic | 20.0% |
| !! | ATTCTATCAGAATTACAATA+AGG | + | chr5_3:27974019-27974038 | None:intergenic | 20.0% |
| !! | TGATAGAATACTTCTATTAT+GGG | - | chr5_3:27974030-27974049 | Msa0807160:intron | 20.0% |
| !! | GTGGAAAATTTACTAAATAA+TGG | - | chr5_3:27974052-27974071 | Msa0807160:intron | 20.0% |
| !! | AAGTAAAAAATTTCACATGA+TGG | - | chr5_3:27974167-27974186 | Msa0807160:CDS | 20.0% |
| !!! | TAGTATTGTTAGGTTAATTT+TGG | - | chr5_3:27974506-27974525 | Msa0807160:intron | 20.0% |
| !! | TTATAAACAGGATCATAAAA+TGG | + | chr5_3:27974682-27974701 | None:intergenic | 20.0% |
| !! | TACACATTAATGAGTATAAT+TGG | - | chr5_3:27974784-27974803 | Msa0807160:CDS | 20.0% |
| !!! | TTGTTTGTGTGATTAATTTT+TGG | + | chr5_3:27974822-27974841 | None:intergenic | 20.0% |
| !! | CAATGTAGTTCAATATAAAT+TGG | + | chr5_3:27975073-27975092 | None:intergenic | 20.0% |
| !! | CAATTTATATTGAACTACAT+TGG | - | chr5_3:27975071-27975090 | Msa0807160:intron | 20.0% |
| !!! | AAATTACTGATTCTATTTTG+TGG | + | chr5_3:27975166-27975185 | None:intergenic | 20.0% |
| !!! | AAATTAGTTCTATTGTTTCA+CGG | + | chr5_3:27975236-27975255 | None:intergenic | 20.0% |
| !! | AGACACTGTAAAAAAAAATT+AGG | - | chr5_3:27975361-27975380 | Msa0807160:intron | 20.0% |
| !!! | TGCTGATTGAATTATATTTA+AGG | - | chr5_3:27975418-27975437 | Msa0807160:intron | 20.0% |
| !! | GCTGATTGAATTATATTTAA+GGG | - | chr5_3:27975419-27975438 | Msa0807160:intron | 20.0% |
| !! | CTGATTGAATTATATTTAAG+GGG | - | chr5_3:27975420-27975439 | Msa0807160:intron | 20.0% |
| !!! | ACGATAATACTTTTATTACA+AGG | + | chr5_3:27975734-27975753 | None:intergenic | 20.0% |
| !!! | ACGATAATACTTTTATTACA+AGG | + | chr5_3:27975734-27975753 | None:intergenic | 20.0% |
| !! | ACATATAACTAAGAAAAGAA+AGG | + | chr5_3:27976018-27976037 | None:intergenic | 20.0% |
| !!! | CATATTGAGTTATTTCTTTT+TGG | - | chr5_3:27976580-27976599 | Msa0807160:intron | 20.0% |
| !!! | ATTGTTATATTTTTAAGGCA+GGG | + | chr5_3:27976669-27976688 | None:intergenic | 20.0% |
| !!! | TATTGTTATATTTTTAAGGC+AGG | + | chr5_3:27976670-27976689 | None:intergenic | 20.0% |
| !! | TCATACAAAATTACTTTGTT+AGG | - | chr5_3:27977112-27977131 | Msa0807160:CDS | 20.0% |
| ! | TAAAAAAAGATGAATGCGAT+CGG | + | chr5_3:27972140-27972159 | None:intergenic | 25.0% |
| !! | TGTTGAAAAACTTTAGGTTT+AGG | + | chr5_3:27972257-27972276 | None:intergenic | 25.0% |
| ! | CCAAAATGTTGAAAAACTTT+AGG | + | chr5_3:27972263-27972282 | None:intergenic | 25.0% |
| !!! | CCTAAAGTTTTTCAACATTT+TGG | - | chr5_3:27972260-27972279 | Msa0807160:CDS | 25.0% |
| !!! | GAATAGCTTTATAATCTAAC+TGG | - | chr5_3:27972334-27972353 | Msa0807160:intron | 25.0% |
| !!! | TAACTGGTTTTTACTTGATT+AGG | - | chr5_3:27972350-27972369 | Msa0807160:intron | 25.0% |
| ! | GAAAAAATGTCTGGATTATT+CGG | - | chr5_3:27972395-27972414 | Msa0807160:intron | 25.0% |
| ! | TTCTGATGAAATTTATTACC+TGG | + | chr5_3:27972446-27972465 | None:intergenic | 25.0% |
| ! | AATAAGTTGTTTATCCAAAC+AGG | + | chr5_3:27972582-27972601 | None:intergenic | 25.0% |
| ! | TCAGAAAAGAAAAAAAGAAG+GGG | + | chr5_3:27972894-27972913 | None:intergenic | 25.0% |
| ! | ATGCAATAGTACAACATTTA+TGG | + | chr5_3:27973313-27973332 | None:intergenic | 25.0% |
| ! | AGTATCAAAAGGAAAAAGTA+AGG | + | chr5_3:27973341-27973360 | None:intergenic | 25.0% |
| ! | ATAATCTATCAGAGGAAAAA+GGG | + | chr5_3:27973583-27973602 | None:intergenic | 25.0% |
| ! | AATAATCCATAATCTATCAG+AGG | + | chr5_3:27973591-27973610 | None:intergenic | 25.0% |
| ! | ACTTGAACCATTAGATTAAA+TGG | - | chr5_3:27973653-27973672 | Msa0807160:intron | 25.0% |
| ! | AAGTACTTGTATAATGCATT+AGG | + | chr5_3:27973826-27973845 | None:intergenic | 25.0% |
| ! | AGTGCTCAATATGATATATA+TGG | + | chr5_3:27973934-27973953 | None:intergenic | 25.0% |
| ! | CTGATAGAATACTTCTATTA+TGG | - | chr5_3:27974029-27974048 | Msa0807160:intron | 25.0% |
| ! | TAAAAAATTTCACATGATGG+CGG | - | chr5_3:27974170-27974189 | Msa0807160:CDS | 25.0% |
| ! | TTATGAGCATAAATAGTTAG+AGG | + | chr5_3:27974551-27974570 | None:intergenic | 25.0% |
| ! | ACATTAATGAGTATAATTGG+AGG | - | chr5_3:27974787-27974806 | Msa0807160:CDS | 25.0% |
| ! | ATCACACAAACAAGTTTATT+CGG | - | chr5_3:27974829-27974848 | Msa0807160:CDS | 25.0% |
| ! | ATAGAATCAGTAATTTGAGA+AGG | - | chr5_3:27975170-27975189 | Msa0807160:intron | 25.0% |
| ! | CTGATTACCTTCTTATTAAA+TGG | + | chr5_3:27975343-27975362 | None:intergenic | 25.0% |
| !! | ATCAACATTGTGAATTTTGT+TGG | + | chr5_3:27975600-27975619 | None:intergenic | 25.0% |
| !!! | TGTGTTTGTTATTCTAATAG+AGG | - | chr5_3:27975758-27975777 | Msa0807160:intron | 25.0% |
| !!! | TCAATTTTAGTACAGAAAAG+AGG | - | chr5_3:27976230-27976249 | Msa0807160:intron | 25.0% |
| !! | GTTTTTCTTTAATCATTCTC+TGG | - | chr5_3:27976304-27976323 | Msa0807160:intron | 25.0% |
| ! | AGGAATTTATAATGCAAAGT+GGG | + | chr5_3:27976359-27976378 | None:intergenic | 25.0% |
| ! | TGATGTTTCACTAAACTTAA+AGG | + | chr5_3:27976713-27976732 | None:intergenic | 25.0% |
| ! | TAGACATTAAATGTCATCTT+TGG | - | chr5_3:27976735-27976754 | Msa0807160:intron | 25.0% |
| !! | TAGGAAAAGCCTTTTATATT+TGG | - | chr5_3:27976771-27976790 | Msa0807160:intron | 25.0% |
| !! | TGCTTTTCTCCAAATATAAA+AGG | + | chr5_3:27976783-27976802 | None:intergenic | 25.0% |
| ! | ATAATCTAAGAAGAGTTGTT+GGG | + | chr5_3:27977075-27977094 | None:intergenic | 25.0% |
| ! | AATAATCTAAGAAGAGTTGT+TGG | + | chr5_3:27977076-27977095 | None:intergenic | 25.0% |
| TACTACTACTACTACTGAAA+TGG | - | chr5_3:27971863-27971882 | Msa0807160:three_prime_UTR | 30.0% | |
| ACTGAAATGGAAAACAATGT+TGG | - | chr5_3:27971876-27971895 | Msa0807160:three_prime_UTR | 30.0% | |
| TCAAATAAGCCAATCGTAAT+AGG | - | chr5_3:27972788-27972807 | Msa0807160:intron | 30.0% | |
| TGAATTAATATCTTGTGCCA+TGG | - | chr5_3:27972836-27972855 | Msa0807160:CDS | 30.0% | |
| GTTTACAACAAAAATTGCCA+TGG | + | chr5_3:27972856-27972875 | None:intergenic | 30.0% | |
| ! | ATGTGTTTTACACTATTTCC+AGG | - | chr5_3:27973022-27973041 | Msa0807160:intron | 30.0% |
| !! | TGTCTTTTCATCTAAGATAC+AGG | + | chr5_3:27973213-27973232 | None:intergenic | 30.0% |
| !! | ACTTTTTCCTTTTGATACTC+TGG | - | chr5_3:27973342-27973361 | Msa0807160:intron | 30.0% |
| GGAAGAAGTTATGTAATCTT+TGG | - | chr5_3:27973383-27973402 | Msa0807160:intron | 30.0% | |
| !!! | TTACAACTTCTGTTGTTTTC+AGG | - | chr5_3:27973437-27973456 | Msa0807160:intron | 30.0% |
| CATAATCTATCAGAGGAAAA+AGG | + | chr5_3:27973584-27973603 | None:intergenic | 30.0% | |
| ! | CTTTTTCCTCTGATAGATTA+TGG | - | chr5_3:27973582-27973601 | Msa0807160:intron | 30.0% |
| ATTAGGATTCATACCTTCTT+AGG | + | chr5_3:27973809-27973828 | None:intergenic | 30.0% | |
| CAAGCCATATGAAATGTATT+TGG | + | chr5_3:27973885-27973904 | None:intergenic | 30.0% | |
| ATCTGTTTACAAAATGCAGT+AGG | + | chr5_3:27973981-27974000 | None:intergenic | 30.0% | |
| TAGAATACTTCTATTATGGG+TGG | - | chr5_3:27974033-27974052 | Msa0807160:intron | 30.0% | |
| TAGAGTTCTCCATTACAAAT+TGG | - | chr5_3:27974084-27974103 | Msa0807160:intron | 30.0% | |
| CTTGCTAATCCAATTTGTAA+TGG | + | chr5_3:27974096-27974115 | None:intergenic | 30.0% | |
| CTTGACACTCAAAAGATATA+CGG | + | chr5_3:27974150-27974169 | None:intergenic | 30.0% | |
| TATCCTTACTTCATTAGATG+AGG | + | chr5_3:27974369-27974388 | None:intergenic | 30.0% | |
| !! | ATACCCACTTTTCTGTTTAT+TGG | + | chr5_3:27974470-27974489 | None:intergenic | 30.0% |
| ATGATCCTGTTTATAAAGAG+TGG | - | chr5_3:27974686-27974705 | Msa0807160:intron | 30.0% | |
| TCTTTCCACTCTTTATAAAC+AGG | + | chr5_3:27974694-27974713 | None:intergenic | 30.0% | |
| ! | CAATGTTTTTCGTTATGTCT+AGG | + | chr5_3:27974762-27974781 | None:intergenic | 30.0% |
| !!! | GATTTTTTGTCTTGCTTCTA+AGG | - | chr5_3:27974873-27974892 | Msa0807160:intron | 30.0% |
| !!! | TACATTGGTTTTGAAATCTC+TGG | - | chr5_3:27975086-27975105 | Msa0807160:intron | 30.0% |
| !!! | ACATTGGTTTTGAAATCTCT+GGG | - | chr5_3:27975087-27975106 | Msa0807160:intron | 30.0% |
| ! | GACAAAAATGCTATGTTTTC+TGG | - | chr5_3:27975139-27975158 | Msa0807160:intron | 30.0% |
| ! | GTATGAACTGTCATTTATCA+TGG | + | chr5_3:27975205-27975224 | None:intergenic | 30.0% |
| ! | CAAATCTGATTTTGTGATGT+TGG | + | chr5_3:27975540-27975559 | None:intergenic | 30.0% |
| GCTAAAGTTATCATTGTACT+AGG | - | chr5_3:27975658-27975677 | Msa0807160:intron | 30.0% | |
| ACAACATTTATACAGTACAG+CGG | + | chr5_3:27976046-27976065 | None:intergenic | 30.0% | |
| !! | GATGTTACTTTAATTCGTAC+AGG | - | chr5_3:27976204-27976223 | Msa0807160:intron | 30.0% |
| ATGAATTCACCTTACTAAAG+AGG | + | chr5_3:27976279-27976298 | None:intergenic | 30.0% | |
| GAGGAATTTATAATGCAAAG+TGG | + | chr5_3:27976360-27976379 | None:intergenic | 30.0% | |
| TTAAATATCGTTACGAAGTG+AGG | + | chr5_3:27976379-27976398 | None:intergenic | 30.0% | |
| CTTAGAACCATTATTTGACT+GGG | + | chr5_3:27976464-27976483 | None:intergenic | 30.0% | |
| !!! | AGTTATTTCTTTTTGGGTGA+AGG | - | chr5_3:27976587-27976606 | Msa0807160:intron | 30.0% |
| ! | AGGGATAGATTTTTACCTTT+TGG | + | chr5_3:27976650-27976669 | None:intergenic | 30.0% |
| TGTTTCACTAAACTTAAAGG+AGG | + | chr5_3:27976710-27976729 | None:intergenic | 30.0% | |
| TGCTTTCATGTTTGTTCAAT+TGG | - | chr5_3:27976883-27976902 | Msa0807160:intron | 30.0% | |
| ATTCTTTACTGAAATGCTTC+AGG | - | chr5_3:27976919-27976938 | Msa0807160:intron | 30.0% | |
| TGGAAAACAATGTTGGAATG+TGG | - | chr5_3:27971883-27971902 | Msa0807160:three_prime_UTR | 35.0% | |
| GAAGCAAGAAATCATGATGA+TGG | - | chr5_3:27971905-27971924 | Msa0807160:three_prime_UTR | 35.0% | |
| ! | AGGTTTAGGATGAAGATGAA+CGG | + | chr5_3:27972243-27972262 | None:intergenic | 35.0% |
| !!! | CATTTTTTCACTCGCATTCA+CGG | + | chr5_3:27972384-27972403 | None:intergenic | 35.0% |
| AATGCGAGTGAAAAAATGTC+TGG | - | chr5_3:27972386-27972405 | Msa0807160:intron | 35.0% | |
| AAAATGTCTGGATTATTCGG+AGG | - | chr5_3:27972398-27972417 | Msa0807160:intron | 35.0% | |
| ATTAGTGAATTCATGCGTGA+CGG | + | chr5_3:27972501-27972520 | None:intergenic | 35.0% | |
| CAAACAGGACCATATAGATT+AGG | + | chr5_3:27972567-27972586 | None:intergenic | 35.0% | |
| CTAATCTATATGGTCCTGTT+TGG | - | chr5_3:27972565-27972584 | Msa0807160:intron | 35.0% | |
| !! | CTTATTTTCACAATCACTCC+AGG | + | chr5_3:27972706-27972725 | None:intergenic | 35.0% |
| ACCTTTAACAGCAGAACAAT+TGG | - | chr5_3:27973049-27973068 | Msa0807160:intron | 35.0% | |
| ACCTTGAACCAACAATTTGA+GGG | + | chr5_3:27973171-27973190 | None:intergenic | 35.0% | |
| TGGTTCAAGGTGATTATTGA+AGG | - | chr5_3:27973180-27973199 | Msa0807160:intron | 35.0% | |
| GAAAGGAAATGCAGTTCATT+TGG | + | chr5_3:27973412-27973431 | None:intergenic | 35.0% | |
| CAGAAGTTGTAAATGACGAA+AGG | + | chr5_3:27973429-27973448 | None:intergenic | 35.0% | |
| !!! | TGTTGTTTTCAGGTTTCAGA+AGG | - | chr5_3:27973447-27973466 | Msa0807160:intron | 35.0% |
| GATTAGTGTAGCTAACTCTT+TGG | - | chr5_3:27973492-27973511 | Msa0807160:intron | 35.0% | |
| CATGCTACAAATCAAACATG+AGG | + | chr5_3:27973628-27973647 | None:intergenic | 35.0% | |
| !! | CTCATGTTTGATTTGTAGCA+TGG | - | chr5_3:27973626-27973645 | Msa0807160:intron | 35.0% |
| ! | ACAAGCTAATTTTGTCCACA+AGG | - | chr5_3:27973781-27973800 | Msa0807160:CDS | 35.0% |
| CCATATGAAATGTATTTGGC+AGG | + | chr5_3:27973881-27973900 | None:intergenic | 35.0% | |
| CCTGCCAAATACATTTCATA+TGG | - | chr5_3:27973878-27973897 | Msa0807160:intron | 35.0% | |
| GCAGTAGGAATAGAAAGTAA+TGG | + | chr5_3:27973966-27973985 | None:intergenic | 35.0% | |
| ATATACGGCACTTTGTCTAA+AGG | + | chr5_3:27974135-27974154 | None:intergenic | 35.0% | |
| !! | TCTATGGAATGTTTCTAGCT+CGG | + | chr5_3:27974282-27974301 | None:intergenic | 35.0% |
| AAACATTCCATAGAGCACAA+AGG | - | chr5_3:27974288-27974307 | Msa0807160:intron | 35.0% | |
| !! | AGGTTTGTTATTGTGCTGTT+CGG | - | chr5_3:27974314-27974333 | Msa0807160:intron | 35.0% |
| CTTCCTCATCTAATGAAGTA+AGG | - | chr5_3:27974363-27974382 | Msa0807160:intron | 35.0% | |
| AGCATAAATAGTTAGAGGAG+AGG | + | chr5_3:27974546-27974565 | None:intergenic | 35.0% | |
| CTCTTATGAAGAGGTAATGA+TGG | + | chr5_3:27974591-27974610 | None:intergenic | 35.0% | |
| CATCATTACCTCTTCATAAG+AGG | - | chr5_3:27974589-27974608 | Msa0807160:intron | 35.0% | |
| CAAGAGCTTACTTGAAATTC+AGG | + | chr5_3:27974630-27974649 | None:intergenic | 35.0% | |
| AGACAAAAAATCTGAGCTTC+TGG | + | chr5_3:27974865-27974884 | None:intergenic | 35.0% | |
| GGAATTTCACCTCAAAACAT+CGG | - | chr5_3:27974894-27974913 | Msa0807160:intron | 35.0% | |
| TCCATGCAATGATTCTGATA+AGG | - | chr5_3:27974960-27974979 | Msa0807160:intron | 35.0% | |
| ACCTTATCAGAATCATTGCA+TGG | + | chr5_3:27974964-27974983 | None:intergenic | 35.0% | |
| TAATCCAATCCATCATGCTT+TGG | + | chr5_3:27975298-27975317 | None:intergenic | 35.0% | |
| !! | GATGGATTGGATTATAGTCA+TGG | - | chr5_3:27975304-27975323 | Msa0807160:intron | 35.0% |
| AGCTCGACCATTTAATAAGA+AGG | - | chr5_3:27975333-27975352 | Msa0807160:intron | 35.0% | |
| GATAATGACTGCACACAATT+TGG | + | chr5_3:27975458-27975477 | None:intergenic | 35.0% | |
| TTTGTTGGATCAAGATCAGA+TGG | + | chr5_3:27975585-27975604 | None:intergenic | 35.0% | |
| CTTTCCAGTAAAGGAGATAT+TGG | - | chr5_3:27976073-27976092 | Msa0807160:intron | 35.0% | |
| AACACCAATATCTCCTTTAC+TGG | + | chr5_3:27976080-27976099 | None:intergenic | 35.0% | |
| ! | TGTTTTCCGCAACATTAAAC+AGG | - | chr5_3:27976096-27976115 | Msa0807160:intron | 35.0% |
| TGGTTTCCTGTTTAATGTTG+CGG | + | chr5_3:27976105-27976124 | None:intergenic | 35.0% | |
| ! | GTTAAACTTTTCCATCCAAG+GGG | + | chr5_3:27976162-27976181 | None:intergenic | 35.0% |
| ! | CGTTAAACTTTTCCATCCAA+GGG | + | chr5_3:27976163-27976182 | None:intergenic | 35.0% |
| ! | TCGTTAAACTTTTCCATCCA+AGG | + | chr5_3:27976164-27976183 | None:intergenic | 35.0% |
| TACTAAAGAGGTCAATTGGT+GGG | + | chr5_3:27976267-27976286 | None:intergenic | 35.0% | |
| TTACTAAAGAGGTCAATTGG+TGG | + | chr5_3:27976268-27976287 | None:intergenic | 35.0% | |
| ACCAATTGACCTCTTTAGTA+AGG | - | chr5_3:27976267-27976286 | Msa0807160:intron | 35.0% | |
| ACCTTACTAAAGAGGTCAAT+TGG | + | chr5_3:27976271-27976290 | None:intergenic | 35.0% | |
| CCTTAGAACCATTATTTGAC+TGG | + | chr5_3:27976465-27976484 | None:intergenic | 35.0% | |
| ! | CCAGTCAAATAATGGTTCTA+AGG | - | chr5_3:27976462-27976481 | Msa0807160:intron | 35.0% |
| CATGAGAAATTCCTTTCATC+TGG | - | chr5_3:27976623-27976642 | Msa0807160:intron | 35.0% | |
| GAGAAAAGCAAATTCAGAGA+GGG | - | chr5_3:27976793-27976812 | Msa0807160:intron | 35.0% | |
| GTACAAATACTCCTAGAAAG+TGG | - | chr5_3:27977176-27977195 | Msa0807160:CDS | 35.0% | |
| TTCTTCGGTTTCAGCATTTG+CGG | - | chr5_3:27972172-27972191 | Msa0807160:intron | 40.0% | |
| TGTGATGAATCAAGAAGTCG+CGG | - | chr5_3:27972202-27972221 | Msa0807160:intron | 40.0% | |
| CATCAAAATGTTGTGCAACC+AGG | - | chr5_3:27972425-27972444 | Msa0807160:intron | 40.0% | |
| !! | GTTGTTTTCATCAGCTATCC+TGG | - | chr5_3:27972685-27972704 | Msa0807160:intron | 40.0% |
| CTTGTGAGAGTGAGACTATT+CGG | + | chr5_3:27972747-27972766 | None:intergenic | 40.0% | |
| CCTCAAACTCCTATTACGAT+TGG | + | chr5_3:27972800-27972819 | None:intergenic | 40.0% | |
| CCAATCGTAATAGGAGTTTG+AGG | - | chr5_3:27972797-27972816 | Msa0807160:CDS | 40.0% | |
| GCCAATTGTTCTGCTGTTAA+AGG | + | chr5_3:27973053-27973072 | None:intergenic | 40.0% | |
| TTCCAAGTCTAAATCTGCTG+TGG | - | chr5_3:27973084-27973103 | Msa0807160:intron | 40.0% | |
| GTCAGTTGGCTAAGCAAAAT+CGG | - | chr5_3:27973143-27973162 | Msa0807160:intron | 40.0% | |
| CTTGAACCAACAATTTGAGG+GGG | + | chr5_3:27973169-27973188 | None:intergenic | 40.0% | |
| CCTTGAACCAACAATTTGAG+GGG | + | chr5_3:27973170-27973189 | None:intergenic | 40.0% | |
| CACCTTGAACCAACAATTTG+AGG | + | chr5_3:27973172-27973191 | None:intergenic | 40.0% | |
| CTTCCATACTAGTTCAACAG+AGG | + | chr5_3:27973368-27973387 | None:intergenic | 40.0% | |
| GGTACAACAAGCGCATAAAA+AGG | - | chr5_3:27973468-27973487 | Msa0807160:intron | 40.0% | |
| TAGAGAGTCAATCTACCAAG+CGG | - | chr5_3:27973518-27973537 | Msa0807160:intron | 40.0% | |
| ! | ACTCTAGGAAGCGTAATCTT+GGG | + | chr5_3:27974257-27974276 | None:intergenic | 40.0% |
| !! | CTATGGAATGTTTCTAGCTC+GGG | + | chr5_3:27974281-27974300 | None:intergenic | 40.0% |
| !!! | TTCAGCAGCATTTTTAGGTC+TGG | + | chr5_3:27974405-27974424 | None:intergenic | 40.0% |
| ! | TCTGCTTCAGCAGCATTTTT+AGG | + | chr5_3:27974410-27974429 | None:intergenic | 40.0% |
| CTGTACCCAAATTCAAAGCA+CGG | - | chr5_3:27974444-27974463 | Msa0807160:intron | 40.0% | |
| ! | ATTGGCCGTGCTTTGAATTT+GGG | + | chr5_3:27974452-27974471 | None:intergenic | 40.0% |
| ! | TATTGGCCGTGCTTTGAATT+TGG | + | chr5_3:27974453-27974472 | None:intergenic | 40.0% |
| ACGGCCAATAAACAGAAAAG+TGG | - | chr5_3:27974463-27974482 | Msa0807160:CDS | 40.0% | |
| CGGCCAATAAACAGAAAAGT+GGG | - | chr5_3:27974464-27974483 | Msa0807160:CDS | 40.0% | |
| TTGAATTGCTATCTCTGCAC+AGG | - | chr5_3:27975254-27975273 | Msa0807160:intron | 40.0% | |
| ! | GTGGTTAGCTCAAGATTCAA+TGG | - | chr5_3:27975506-27975525 | Msa0807160:intron | 40.0% |
| !! | GAAGTTGTCTAGTTCTCGAA+AGG | - | chr5_3:27975912-27975931 | Msa0807160:CDS | 40.0% |
| ! | GAAAGGTGTATCAGAGAAGA+TGG | - | chr5_3:27975929-27975948 | Msa0807160:CDS | 40.0% |
| GTGCAGATACTTTCCAGTAA+AGG | - | chr5_3:27976064-27976083 | Msa0807160:intron | 40.0% | |
| AGTGATAACCAACTCACCAT+TGG | + | chr5_3:27976133-27976152 | None:intergenic | 40.0% | |
| AATCAGTTGTCCCTAACATC+TGG | - | chr5_3:27976436-27976455 | Msa0807160:intron | 40.0% | |
| !! | AATGGTTCTAAGGTGAAACC+AGG | - | chr5_3:27976472-27976491 | Msa0807160:intron | 40.0% |
| TCCTCATTTCAGTGTGTTCA+AGG | - | chr5_3:27976495-27976514 | Msa0807160:intron | 40.0% | |
| ACCTTGAACACACTGAAATG+AGG | + | chr5_3:27976499-27976518 | None:intergenic | 40.0% | |
| TTCCTTTCATCTGGACCAAA+AGG | - | chr5_3:27976632-27976651 | Msa0807160:intron | 40.0% | |
| ! | TACCTTTTGGTCCAGATGAA+AGG | + | chr5_3:27976637-27976656 | None:intergenic | 40.0% |
| CTTAAAGGAGGAACAGAACA+AGG | + | chr5_3:27976698-27976717 | None:intergenic | 40.0% | |
| CTTTGGCTGACAAATGATGT+AGG | - | chr5_3:27976752-27976771 | Msa0807160:intron | 40.0% | |
| GGAGAAAAGCAAATTCAGAG+AGG | - | chr5_3:27976792-27976811 | Msa0807160:intron | 40.0% | |
| CTGGTACAATATTGAGTCCA+AGG | - | chr5_3:27976838-27976857 | Msa0807160:CDS | 40.0% | |
| GTACAATATTGAGTCCAAGG+AGG | - | chr5_3:27976841-27976860 | Msa0807160:CDS | 40.0% | |
| ! | TATCCGCAACAGAATTTTGC+CGG | - | chr5_3:27977007-27977026 | Msa0807160:CDS | 40.0% |
| !!! | AGGTTTTGTTACGTCTCCAT+CGG | + | chr5_3:27977045-27977064 | None:intergenic | 40.0% |
| AAGAGTTGTTGGGCACTATT+AGG | + | chr5_3:27977065-27977084 | None:intergenic | 40.0% | |
| ACTCCTAGAAAGTGGAACTT+AGG | - | chr5_3:27977184-27977203 | Msa0807160:CDS | 40.0% | |
| GTTAAAAACAAAACCCCGAG+TGG | + | chr5_3:27977211-27977230 | None:intergenic | 40.0% | |
| ACGAGAAGGAGGATAAGTTC+CGG | + | chr5_3:27972069-27972088 | None:intergenic | 45.0% | |
| GAATGAGAGAACGAACGAGA+AGG | + | chr5_3:27972083-27972102 | None:intergenic | 45.0% | |
| TTCACTCGCATTCACGGAAT+TGG | + | chr5_3:27972378-27972397 | None:intergenic | 45.0% | |
| CTGCTGTTAAAGGTCATTCC+TGG | + | chr5_3:27973043-27973062 | None:intergenic | 45.0% | |
| AACAGCAGAACAATTGGCGA+AGG | - | chr5_3:27973055-27973074 | Msa0807160:intron | 45.0% | |
| CACCACAGCAGATTTAGACT+TGG | + | chr5_3:27973089-27973108 | None:intergenic | 45.0% | |
| GAAACCTACAGCTAGTCAGT+TGG | - | chr5_3:27973129-27973148 | Msa0807160:intron | 45.0% | |
| ! | TTAGCCAACTGACTAGCTGT+AGG | + | chr5_3:27973136-27973155 | None:intergenic | 45.0% |
| !! | CCCCTCAAATTGTTGGTTCA+AGG | - | chr5_3:27973167-27973186 | Msa0807160:intron | 45.0% |
| ! | ACAGAGGCCAGAGTATCAAA+AGG | + | chr5_3:27973352-27973371 | None:intergenic | 45.0% |
| TGGCCTCTGTTGAACTAGTA+TGG | - | chr5_3:27973362-27973381 | Msa0807160:intron | 45.0% | |
| TACCAAGCGGCAGAAATTAG+AGG | - | chr5_3:27973531-27973550 | Msa0807160:intron | 45.0% | |
| ACCAAGCGGCAGAAATTAGA+GGG | - | chr5_3:27973532-27973551 | Msa0807160:intron | 45.0% | |
| TACCACATCTTTCCTGTGAC+AGG | - | chr5_3:27973742-27973761 | Msa0807160:CDS | 45.0% | |
| AACCTGTCACAGGAAAGATG+TGG | + | chr5_3:27973747-27973766 | None:intergenic | 45.0% | |
| ACATCTTTCCTGTGACAGGT+TGG | - | chr5_3:27973746-27973765 | Msa0807160:CDS | 45.0% | |
| ATACCTTCTTAGGTGCCTTG+TGG | + | chr5_3:27973799-27973818 | None:intergenic | 45.0% | |
| ! | CACTCTAGGAAGCGTAATCT+TGG | + | chr5_3:27974258-27974277 | None:intergenic | 45.0% |
| TCCATAGAGCACAAAGGACT+AGG | - | chr5_3:27974294-27974313 | Msa0807160:intron | 45.0% | |
| ACCTAGTCCTTTGTGCTCTA+TGG | + | chr5_3:27974298-27974317 | None:intergenic | 45.0% | |
| TGAAGCAGAACACTTGACAG+TGG | - | chr5_3:27974421-27974440 | Msa0807160:intron | 45.0% | |
| TTCACCTCAAAACATCGGAG+AGG | - | chr5_3:27974899-27974918 | Msa0807160:intron | 45.0% | |
| TCACCTCAAAACATCGGAGA+GGG | - | chr5_3:27974900-27974919 | Msa0807160:intron | 45.0% | |
| !! | GACTGATTTTTGCTGTGTGC+AGG | - | chr5_3:27975111-27975130 | Msa0807160:intron | 45.0% |
| !! | TGCTCCAAAGCATGATGGAT+TGG | - | chr5_3:27975291-27975310 | Msa0807160:CDS | 45.0% |
| GTTATCACTTTGTCACCCCT+TGG | - | chr5_3:27976144-27976163 | Msa0807160:intron | 45.0% | |
| ! | TCTGGAGCCCAGTCAAATAA+TGG | - | chr5_3:27976454-27976473 | Msa0807160:intron | 45.0% |
| AACACACTGAAATGAGGACC+TGG | + | chr5_3:27976493-27976512 | None:intergenic | 45.0% | |
| AAGGAGGAACAGAACAAGGA+TGG | + | chr5_3:27976694-27976713 | None:intergenic | 45.0% | |
| CAAATTCAGAGAGGGAGTGA+GGG | - | chr5_3:27976801-27976820 | Msa0807160:intron | 45.0% | |
| ! | TCCAAGGAGGTATGCATAGT+TGG | - | chr5_3:27976854-27976873 | Msa0807160:CDS | 45.0% |
| ACCAACTATGCATACCTCCT+TGG | + | chr5_3:27976858-27976877 | None:intergenic | 45.0% | |
| ACTGAAATGCTTCAGGAACC+TGG | - | chr5_3:27976926-27976945 | Msa0807160:intron | 45.0% | |
| CTGAAATGCTTCAGGAACCT+GGG | - | chr5_3:27976927-27976946 | Msa0807160:intron | 45.0% | |
| TAGCCGGCAAAATTCTGTTG+CGG | + | chr5_3:27977013-27977032 | None:intergenic | 45.0% | |
| GGACCTAAGTTCCACTTTCT+AGG | + | chr5_3:27977190-27977209 | None:intergenic | 45.0% | |
| AAGTGGAACTTAGGTCCACT+CGG | - | chr5_3:27977193-27977212 | Msa0807160:exon | 45.0% | |
| !!! | ATTAAATTTAAAATTATAGA+AGG | + | chr5_3:27976525-27976544 | None:intergenic | 5.0% |
| GCAGTGAAATCGAAGAAGCG+AGG | + | chr5_3:27971990-27972009 | None:intergenic | 50.0% | |
| AACTTCCACAACCTGAACGC+TGG | - | chr5_3:27972033-27972052 | Msa0807160:three_prime_UTR | 50.0% | |
| AGAAGGAGGATAAGTTCCGG+CGG | + | chr5_3:27972066-27972085 | None:intergenic | 50.0% | |
| TGAGAGAACGAACGAGAAGG+AGG | + | chr5_3:27972080-27972099 | None:intergenic | 50.0% | |
| AATCGGCCCCCTCAAATTGT+TGG | - | chr5_3:27973160-27973179 | Msa0807160:intron | 50.0% | |
| ACCCTCTAATTTCTGCCGCT+TGG | + | chr5_3:27973536-27973555 | None:intergenic | 50.0% | |
| AAGCGGCAGAAATTAGAGGG+TGG | - | chr5_3:27973535-27973554 | Msa0807160:intron | 50.0% | |
| TCACATCACCAACCTGTCAC+AGG | + | chr5_3:27973757-27973776 | None:intergenic | 50.0% | |
| ! | TGTCCACAAGGCACCTAAGA+AGG | - | chr5_3:27973793-27973812 | Msa0807160:intron | 50.0% |
| GTAGCTGCTGATCAAAACGC+TGG | - | chr5_3:27974221-27974240 | Msa0807160:intron | 50.0% | |
| ! | AGGAAGCGTAATCTTGGGCT+TGG | + | chr5_3:27974252-27974271 | None:intergenic | 50.0% |
| TTCATAAGAGGACCCCTGCA+CGG | - | chr5_3:27974601-27974620 | Msa0807160:intron | 50.0% | |
| AAATTCAGGCAACCGTGCAG+GGG | + | chr5_3:27974616-27974635 | None:intergenic | 50.0% | |
| GAAATTCAGGCAACCGTGCA+GGG | + | chr5_3:27974617-27974636 | None:intergenic | 50.0% | |
| TGAAATTCAGGCAACCGTGC+AGG | + | chr5_3:27974618-27974637 | None:intergenic | 50.0% | |
| TGTAGCAGATGTGTGCTGCA+TGG | + | chr5_3:27974926-27974945 | None:intergenic | 50.0% | |
| ! | TTTGGAGCACCCATCACAGA+TGG | + | chr5_3:27975280-27975299 | None:intergenic | 50.0% |
| ATGGGTGCTCCAAAGCATGA+TGG | - | chr5_3:27975286-27975305 | Msa0807160:CDS | 50.0% | |
| !! | CCACCTATATGTGCTGACTG+CGG | + | chr5_3:27975490-27975509 | None:intergenic | 50.0% |
| ACAGGAAACCACTGTGCCAA+TGG | - | chr5_3:27976114-27976133 | Msa0807160:intron | 50.0% | |
| TCACTTTGTCACCCCTTGGA+TGG | - | chr5_3:27976148-27976167 | Msa0807160:intron | 50.0% | |
| TGACTGGGCTCCAGATGTTA+GGG | + | chr5_3:27976449-27976468 | None:intergenic | 50.0% | |
| TTGACTGGGCTCCAGATGTT+AGG | + | chr5_3:27976450-27976469 | None:intergenic | 50.0% | |
| GCAAATTCAGAGAGGGAGTG+AGG | - | chr5_3:27976800-27976819 | Msa0807160:intron | 50.0% | |
| GCTTCAGGAACCTGGGAATT+CGG | - | chr5_3:27976934-27976953 | Msa0807160:intron | 50.0% | |
| CTTCGATTGTAGTTGTCGCC+TGG | + | chr5_3:27976966-27976985 | None:intergenic | 50.0% | |
| AGTGGAACTTAGGTCCACTC+GGG | - | chr5_3:27977194-27977213 | Msa0807160:exon | 50.0% | |
| !! | TCGAACCAGCGTTCAGGTTG+TGG | + | chr5_3:27972041-27972060 | None:intergenic | 55.0% |
| AGAGGGTGGTCTCTTGTGCA+AGG | - | chr5_3:27973549-27973568 | Msa0807160:intron | 55.0% | |
| !! | GTTTCTAGCTCGGGCACTCT+AGG | + | chr5_3:27974272-27974291 | None:intergenic | 55.0% |
| GCAGGGGTCCTCTTATGAAG+AGG | + | chr5_3:27974600-27974619 | None:intergenic | 55.0% | |
| ! | TGGCCCTCTCCGATGTTTTG+AGG | + | chr5_3:27974906-27974925 | None:intergenic | 55.0% |
| TCTGCACAGGCCATCTGTGA+TGG | - | chr5_3:27975267-27975286 | Msa0807160:intron | 55.0% | |
| CTGCACAGGCCATCTGTGAT+GGG | - | chr5_3:27975268-27975287 | Msa0807160:intron | 55.0% | |
| !! | CCTATATGTGCTGACTGCGG+TGG | + | chr5_3:27975487-27975506 | None:intergenic | 55.0% |
| CCACCGCAGTCAGCACATAT+AGG | - | chr5_3:27975484-27975503 | Msa0807160:intron | 55.0% | |
| CCGCAGTCAGCACATATAGG+TGG | - | chr5_3:27975487-27975506 | Msa0807160:intron | 55.0% | |
| CCAACTCACCATTGGCACAG+TGG | + | chr5_3:27976125-27976144 | None:intergenic | 55.0% | |
| CCACTGTGCCAATGGTGAGT+TGG | - | chr5_3:27976122-27976141 | Msa0807160:intron | 55.0% | |
| GAGGGTTGCATCAACGAAGC+TGG | - | chr5_3:27976819-27976838 | Msa0807160:CDS | 55.0% | |
| !! | CCATCGGCTCTCTAGTTAGC+CGG | + | chr5_3:27977029-27977048 | None:intergenic | 55.0% |
| GTGGAACTTAGGTCCACTCG+GGG | - | chr5_3:27977195-27977214 | Msa0807160:exon | 55.0% | |
| GCGGTTTCGAACCAGCGTTC+AGG | + | chr5_3:27972047-27972066 | None:intergenic | 60.0% | |
| !! | GAACGCTGGTTCGAAACCGC+CGG | - | chr5_3:27972047-27972066 | Msa0807160:three_prime_UTR | 60.0% |
| CTGGCAGTCACCGAATTCCC+AGG | + | chr5_3:27976947-27976966 | None:intergenic | 60.0% | |
| ! | CTGGGAATTCGGTGACTGCC+AGG | - | chr5_3:27976945-27976964 | Msa0807160:intron | 60.0% |
| CCGGCTAACTAGAGAGCCGA+TGG | - | chr5_3:27977026-27977045 | Msa0807160:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 27971812 | 27977273 | 27971812 | ID=Msa0807160;Name=Msa0807160 |
| chr5_3 | mRNA | 27971812 | 27977273 | 27971812 | ID=Msa0807160-mRNA-1;Parent=Msa0807160;Name=Msa0807160-mRNA-1;_AED=0.17;_eAED=0.17;_QI=70|1|1|1|1|1|18|314|500 |
| chr5_3 | exon | 27971812 | 27972144 | 27971812 | ID=Msa0807160-mRNA-1:exon:9932;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27972223 | 27972311 | 27972223 | ID=Msa0807160-mRNA-1:exon:9931;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27972432 | 27972476 | 27972432 | ID=Msa0807160-mRNA-1:exon:9930;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27972569 | 27972643 | 27972569 | ID=Msa0807160-mRNA-1:exon:9929;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27972797 | 27972859 | 27972797 | ID=Msa0807160-mRNA-1:exon:9928;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27972950 | 27973015 | 27972950 | ID=Msa0807160-mRNA-1:exon:9927;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27973731 | 27973809 | 27973731 | ID=Msa0807160-mRNA-1:exon:9926;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27973894 | 27973952 | 27973894 | ID=Msa0807160-mRNA-1:exon:9925;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27974104 | 27974190 | 27974104 | ID=Msa0807160-mRNA-1:exon:9924;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27974447 | 27974509 | 27974447 | ID=Msa0807160-mRNA-1:exon:9923;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27974604 | 27974679 | 27974604 | ID=Msa0807160-mRNA-1:exon:9922;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27974770 | 27974867 | 27974770 | ID=Msa0807160-mRNA-1:exon:9921;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27975271 | 27975321 | 27975271 | ID=Msa0807160-mRNA-1:exon:9920;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27975515 | 27975626 | 27975515 | ID=Msa0807160-mRNA-1:exon:9919;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27975897 | 27976041 | 27975897 | ID=Msa0807160-mRNA-1:exon:9918;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27976639 | 27976713 | 27976639 | ID=Msa0807160-mRNA-1:exon:9917;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27976804 | 27976899 | 27976804 | ID=Msa0807160-mRNA-1:exon:9916;Parent=Msa0807160-mRNA-1 |
| chr5_3 | exon | 27976999 | 27977273 | 27976999 | ID=Msa0807160-mRNA-1:exon:9915;Parent=Msa0807160-mRNA-1 |
| chr5_3 | five_prime_UTR | 27977204 | 27977273 | 27977204 | ID=Msa0807160-mRNA-1:five_prime_utr;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27976999 | 27977203 | 27976999 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27976804 | 27976899 | 27976804 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27976639 | 27976713 | 27976639 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27975897 | 27976041 | 27975897 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27975515 | 27975626 | 27975515 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27975271 | 27975321 | 27975271 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27974770 | 27974867 | 27974770 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27974604 | 27974679 | 27974604 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27974447 | 27974509 | 27974447 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27974104 | 27974190 | 27974104 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27973894 | 27973952 | 27973894 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27973731 | 27973809 | 27973731 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972950 | 27973015 | 27972950 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972797 | 27972859 | 27972797 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972569 | 27972643 | 27972569 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972432 | 27972476 | 27972432 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972223 | 27972311 | 27972223 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | CDS | 27972126 | 27972144 | 27972126 | ID=Msa0807160-mRNA-1:cds;Parent=Msa0807160-mRNA-1 |
| chr5_3 | three_prime_UTR | 27971812 | 27972125 | 27971812 | ID=Msa0807160-mRNA-1:three_prime_utr;Parent=Msa0807160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
