AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0416160


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416160 MtrunA17_Chr3g0112731 95.485 598 16 4 1 590 1 595 0.0 1164
Msa0416160 MtrunA17_Chr5g0436141 73.655 539 127 6 50 582 32 561 0.0 794
Msa0416160 MtrunA17_Chr7g0240501 62.205 508 172 6 58 560 144 636 0.0 640
Msa0416160 MtrunA17_Chr4g0008771 63.765 425 145 3 74 494 64 483 0.0 545
Msa0416160 MtrunA17_Chr4g0038651 57.238 449 175 5 98 534 82 525 1.38e-177 514
Msa0416160 MtrunA17_Chr8g0348921 56.701 388 147 4 93 467 87 466 3.47e-144 425
Msa0416160 MtrunA17_Chr4g0004771 49.364 393 165 6 103 488 90 455 1.58e-132 398
Msa0416160 MtrunA17_Chr7g0247761 51.781 421 139 4 103 467 113 525 4.41e-132 396
Msa0416160 MtrunA17_Chr6g0485861 50.386 389 165 6 105 484 98 467 3.63e-130 392
Msa0416160 MtrunA17_Chr2g0331631 48.750 400 186 4 68 466 51 432 1.11e-129 390
Msa0416160 MtrunA17_Chr5g0408591 46.739 368 186 3 99 466 114 471 2.55e-109 338
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0416160 AT5G05940.1 59.829 585 209 10 1 569 1 575 0.0 664
Msa0416160 AT5G02010.1 68.910 431 114 6 86 510 54 470 0.0 612
Msa0416160 AT3G55660.1 55.744 531 180 13 58 555 69 577 0.0 541
Msa0416160 AT5G05940.2 63.182 440 151 4 1 434 1 435 0.0 540
Msa0416160 AT4G38430.1 53.653 479 195 6 35 508 40 496 8.07e-174 504
Msa0416160 AT3G55660.2 61.680 381 130 5 58 434 69 437 1.03e-161 469
Msa0416160 AT4G00460.2 53.173 457 185 8 25 473 38 473 1.97e-154 452
Msa0416160 AT4G00460.4 53.173 457 185 8 25 473 38 473 1.97e-154 452
Msa0416160 AT1G01700.1 51.860 457 198 7 20 467 36 479 1.64e-147 434
Msa0416160 AT1G01700.4 48.665 487 198 8 20 467 36 509 5.50e-141 419
Msa0416160 AT2G45890.1 52.618 382 160 6 102 473 92 462 2.05e-133 398
Msa0416160 AT3G24620.1 52.446 368 155 5 102 468 84 432 6.02e-132 396
Msa0416160 AT4G13240.1 50.535 374 165 5 98 470 69 423 3.90e-127 384
Msa0416160 AT1G52240.1 52.846 369 151 5 104 471 105 451 6.03e-127 384
Msa0416160 AT1G01700.3 49.425 435 191 8 20 438 36 457 6.88e-126 378
Msa0416160 AT4G00460.3 56.305 341 134 5 140 473 8 340 3.13e-125 372
Msa0416160 AT1G79860.1 48.501 367 168 5 101 466 90 436 1.10e-121 369
Msa0416160 AT5G19560.1 49.189 370 170 4 102 470 43 395 3.34e-120 365
Msa0416160 AT5G19560.5 49.189 370 170 4 102 470 43 395 3.34e-120 365
Msa0416160 AT5G19560.4 49.189 370 170 4 102 470 62 414 9.03e-120 364
Msa0416160 AT3G16130.1 49.867 377 163 6 100 471 87 442 2.05e-119 364
Msa0416160 AT5G19560.2 47.605 334 157 4 102 434 62 378 1.67e-103 318
Msa0416160 AT1G31650.2 42.779 367 201 2 103 469 108 465 4.93e-100 315
Msa0416160 AT1G31650.1 42.779 367 201 2 103 469 136 493 2.55e-99 313
Msa0416160 AT4G00460.1 52.427 309 128 6 25 329 38 331 9.54e-95 294
Msa0416160 AT1G01700.5 51.163 301 137 4 20 315 36 331 1.23e-88 279
Msa0416160 AT1G01700.2 51.163 301 137 4 20 315 36 331 1.23e-88 279
Msa0416160 AT5G19560.3 46.763 278 130 4 194 470 5 265 9.33e-81 258

Find 143 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAAGTTCCTGAGTCATATT+TGG 0.209473 3_2:+62879580 Msa0416160:CDS
GTTTCGGAGCTACAGAATTT+TGG 0.235434 3_2:+62879339 Msa0416160:CDS
CCGAATTTCACAGCATTTAG+AGG 0.271027 3_2:-62880960 None:intergenic
CAGCATTGCTTTGGCTGAAA+TGG 0.280188 3_2:+62879559 Msa0416160:CDS
TTCTGCAGGTAATGACTTGC+AGG 0.301595 3_2:+62879132 Msa0416160:intron
GGAGTTCTCTCCCCTCTTAC+AGG 0.304069 3_2:-62880759 None:intergenic
AGAAAGCTACTCTAGAGTTT+TGG 0.305551 3_2:+62880536 Msa0416160:CDS
TTGTTGAATTAATACCTTCT+TGG 0.307496 3_2:+62878991 Msa0416160:CDS
GAACATGTAGCTACTGCATT+TGG 0.324852 3_2:+62878879 Msa0416160:intron
GCTTCGGGAACACGGGGAAC+GGG 0.327886 3_2:-62879452 None:intergenic
CTTGTTGCATTGGATCTTGC+TGG 0.334600 3_2:-62880403 None:intergenic
ACTACTACCAAATAAAATAT+TGG 0.339994 3_2:-62881045 None:intergenic
TTGAAATGGAAAAGGTGAAA+TGG 0.342721 3_2:-62877323 None:intergenic
GTTAAGGACTTCATGCTTGA+TGG 0.349943 3_2:+62880288 Msa0416160:CDS
AAACCTCAGCGTCGCGGCTT+TGG 0.359263 3_2:+62880828 Msa0416160:CDS
CCTGAGACAGACACTGAAAA+TGG 0.361705 3_2:-62880675 None:intergenic
GTAGTTGAACGGTTGGGATT+AGG 0.362566 3_2:-62880246 None:intergenic
TGAAATGGAAAAGGTGAAAT+GGG 0.365912 3_2:-62877322 None:intergenic
CTTCTCACTGAGACCTGCTT+CGG 0.374692 3_2:-62879468 None:intergenic
CCTCTAAATGCTGTGAAATT+CGG 0.375055 3_2:+62880960 Msa0416160:CDS
ACGCACAAAATGTACAACTA+TGG 0.375415 3_2:+62877635 Msa0416160:CDS
CTACTGCATTTGGGCAACTT+TGG 0.383497 3_2:+62878889 Msa0416160:CDS
AAAAGGGGTTTGCACTGCTT+TGG 0.392592 3_2:+62878090 Msa0416160:CDS
ACCTCAAGTTTCTTTCCATC+AGG 0.394767 3_2:-62879023 None:intergenic
TTTAAGGATGTTTGAAAGGA+AGG 0.398924 3_2:-62877219 None:intergenic
AGAGCTTTGTCAAATTATCT+TGG 0.407039 3_2:+62880858 Msa0416160:CDS
GGTGAAGATATGTCAGGTTC+AGG 0.410078 3_2:+62878067 Msa0416160:CDS
GTTCAACTACAAAGTCTTCA+TGG 0.412655 3_2:+62880259 Msa0416160:CDS
TTCTCACTGAGACCTGCTTC+GGG 0.416408 3_2:-62879467 None:intergenic
TCCTTGAAGCATCGGTTCCC+TGG 0.420015 3_2:+62880357 Msa0416160:CDS
GTCTATCAACAGCATTGCTT+TGG 0.420189 3_2:+62879550 Msa0416160:CDS
TGGGTTTGTTAGAACTCAAC+GGG 0.421434 3_2:-62877303 None:intergenic
CAGGAAATATTAGACAGTTT+CGG 0.426447 3_2:+62879323 Msa0416160:intron
TGGAAGCTGCTATTTATCTA+TGG 0.429701 3_2:+62880196 Msa0416160:CDS
GACTTTGTAGTTGAACGGTT+GGG 0.435846 3_2:-62880252 None:intergenic
GTTCCCCGTGTTCCCGAAGC+AGG 0.436453 3_2:+62879455 Msa0416160:CDS
AACATGTAGCTACTGCATTT+GGG 0.437715 3_2:+62878880 Msa0416160:intron
ACTCAAACATTTCAGGATGT+TGG 0.439334 3_2:+62880501 Msa0416160:intron
GAAGTTGAAGCTAAATCAAA+TGG 0.440177 3_2:+62877507 Msa0416160:CDS
GGTTCCTACAACGGGTAATA+CGG 0.441368 3_2:+62880644 Msa0416160:CDS
GTGAATGGATACAAATGAAA+GGG 0.443011 3_2:-62881023 None:intergenic
AATGCCATTACTAATCTTTG+TGG 0.444234 3_2:+62878121 Msa0416160:CDS
TGCTTCGGGAACACGGGGAA+CGG 0.446615 3_2:-62879453 None:intergenic
GAATTGGAACCTTGTTGCAT+TGG 0.446692 3_2:-62880413 None:intergenic
TTACTTAAATCTGAAGTAGT+TGG 0.449261 3_2:+62881095 Msa0416160:three_prime_UTR
TTATCGAGTTTGCGAAGGGC+TGG 0.449399 3_2:-62879182 None:intergenic
GATATGTCAGGTTCAGGAAA+AGG 0.450921 3_2:+62878073 Msa0416160:CDS
CAGAATGGAAGAACTTGCCT+TGG 0.450957 3_2:+62880066 Msa0416160:intron
TCTTTCTTCTCACAAGGTAG+TGG 0.451314 3_2:-62878921 None:intergenic
AGCCGCTGATTCAGAAGGTT+CGG 0.452812 3_2:+62879382 Msa0416160:CDS
TCAGGAAATGTTTGCCAAGA+AGG 0.453625 3_2:-62879005 None:intergenic
AAATCAAATGGTACTCCTCT+TGG 0.453653 3_2:+62877519 Msa0416160:CDS
TTCTAAATTCCTTGAAGCAT+CGG 0.455660 3_2:+62880349 Msa0416160:CDS
GAAAGTGTAGCTTTGAGAAT+AGG 0.456755 3_2:-62877546 None:intergenic
GCCAGGGAACCGATGCTTCA+AGG 0.460031 3_2:-62880358 None:intergenic
AGATAAAGTTTCCATCTTTG+AGG 0.460415 3_2:-62877358 None:intergenic
ACTCCACACAAAGCACCATT+TGG 0.474333 3_2:+62880699 Msa0416160:CDS
ATATGTCAGGTTCAGGAAAA+GGG 0.474996 3_2:+62878074 Msa0416160:CDS
TTTGCATTGGTTCCTACAAC+GGG 0.475749 3_2:+62880636 Msa0416160:CDS
GTTGATGCAAATATCTGTCC+TGG 0.487154 3_2:-62879156 None:intergenic
CCAAATAAAATATTGGTGAA+TGG 0.488327 3_2:-62881038 None:intergenic
ACTATGGATGTAAAAGTGTC+AGG 0.488542 3_2:+62877651 Msa0416160:CDS
AGAAATGTGGCAAAGAGAGA+TGG 0.490084 3_2:+62878941 Msa0416160:CDS
CCATTGATTAGTCCTGTAAG+AGG 0.490411 3_2:+62880747 Msa0416160:CDS
AGAACAAGAACGCTTTGAGC+TGG 0.498779 3_2:-62877568 None:intergenic
ACTGTTTAAGGATGTTTGAA+AGG 0.506289 3_2:-62877223 None:intergenic
TCTTGGCAAACATTTCCTGA+TGG 0.512838 3_2:+62879008 Msa0416160:CDS
CTGAATTGACTTGCGAAAAG+AGG 0.513814 3_2:-62879405 None:intergenic
ACATTCAGATAGATTTGCAT+TGG 0.514397 3_2:+62880623 Msa0416160:CDS
AAGGTAGTTTGAGTTAAGCC+AGG 0.520536 3_2:-62880375 None:intergenic
GAAAACTTAGGCGTGCCAAA+TGG 0.520603 3_2:-62880714 None:intergenic
CTTCGGGAACACGGGGAACG+GGG 0.523029 3_2:-62879451 None:intergenic
CACATTTCTTTCTTCTCACA+AGG 0.525180 3_2:-62878927 None:intergenic
ACACAAATCAAACTTGGAAG+TGG 0.525473 3_2:+62877611 Msa0416160:CDS
GAGACCTGCTTCGGGAACAC+GGG 0.529025 3_2:-62879459 None:intergenic
AAACAAACACAAATCAAACT+TGG 0.529417 3_2:+62877605 Msa0416160:CDS
AGATTTGCAAAATTGTTGCT+AGG 0.530179 3_2:+62878046 Msa0416160:CDS
TTGCTAGGTGAAGATATGTC+AGG 0.530876 3_2:+62878061 Msa0416160:CDS
TTCAACTACAAAGTCTTCAT+GGG 0.532814 3_2:+62880260 Msa0416160:CDS
TGAGACCTGCTTCGGGAACA+CGG 0.534669 3_2:-62879460 None:intergenic
TTGGATCTTGCTGGTATCCA+AGG 0.534759 3_2:-62880394 None:intergenic
GGTGAATGGATACAAATGAA+AGG 0.539075 3_2:-62881024 None:intergenic
CGAGTTTGCGAAGGGCTGGA+AGG 0.544385 3_2:-62879178 None:intergenic
AGACTTTGTAGTTGAACGGT+TGG 0.547598 3_2:-62880253 None:intergenic
GGACTAATCAATGGCACAGA+AGG 0.548607 3_2:-62880738 None:intergenic
AGGTAATGACTTGCAGGCCC+AGG 0.549183 3_2:+62879138 Msa0416160:intron
TTGTTGTTGTTGTGGAGGAA+AGG 0.550030 3_2:-62880780 None:intergenic
TGGCTTAACTCAAACTACCT+TGG 0.552224 3_2:+62880377 Msa0416160:CDS
CATACCACAAAGATTAGTAA+TGG 0.555497 3_2:-62878125 None:intergenic
CCTCTTACAGGACTAATCAA+TGG 0.560425 3_2:-62880747 None:intergenic
ATGAAGACTTTGTAGTTGAA+CGG 0.561493 3_2:-62880257 None:intergenic
ATTTGCATTGGTTCCTACAA+CGG 0.562888 3_2:+62880635 Msa0416160:CDS
TGGGATTAGGCGTTGATCTG+TGG 0.563972 3_2:-62880233 None:intergenic
CATTGATTAGTCCTGTAAGA+GGG 0.566090 3_2:+62880748 Msa0416160:CDS
GGCAATTCAACTGAGGTCAA+TGG 0.576601 3_2:+62880906 Msa0416160:CDS
GAAACCGTATTACCCGTTGT+AGG 0.578024 3_2:-62880648 None:intergenic
CACATCAGATCAATTCTCCT+CGG 0.578395 3_2:+62880110 Msa0416160:CDS
TTGTGTCACTGATTCAAGTG+TGG 0.578419 3_2:+62877428 Msa0416160:CDS
AACAGATGTTGATATGATGA+AGG 0.579015 3_2:+62878021 Msa0416160:intron
GCATGTTATCGAGTTTGCGA+AGG 0.584286 3_2:-62879187 None:intergenic
ATGGGTTTGTTAGAACTCAA+CGG 0.584882 3_2:-62877304 None:intergenic
ATTGTAGCCGCTGATTCAGA+AGG 0.591209 3_2:+62879377 Msa0416160:CDS
CAAATGGTACTCCTCTTGGT+TGG 0.592121 3_2:+62877523 Msa0416160:CDS
CATGTTATCGAGTTTGCGAA+GGG 0.595448 3_2:-62879186 None:intergenic
TATGTCAGGTTCAGGAAAAG+GGG 0.595512 3_2:+62878075 Msa0416160:CDS
GGCACAGAAGGCGAAAACTT+AGG 0.596415 3_2:-62880726 None:intergenic
TAGAAGTGAGACCTTGGGGA+GGG 0.597116 3_2:-62879606 None:intergenic
TTGATGCAAATATCTGTCCT+GGG 0.598206 3_2:-62879155 None:intergenic
TGTGGCAAAGAGAGATGGAA+TGG 0.599356 3_2:+62878946 Msa0416160:CDS
ATCGGTAAATAAAATCTCCA+AGG 0.602171 3_2:-62880083 None:intergenic
AGGGTTTCCAAATATGACTC+AGG 0.603777 3_2:-62879587 None:intergenic
AGAGGTCTAAACAATCAAGT+AGG 0.606917 3_2:-62880137 None:intergenic
TCTAGAACTACAAGTTTCAG+TGG 0.607091 3_2:+62877453 Msa0416160:CDS
AGGTAGTTTGAGTTAAGCCA+GGG 0.610626 3_2:-62880374 None:intergenic
TGAATGGATACAAATGAAAG+GGG 0.619752 3_2:-62881022 None:intergenic
CATCGATGATTTGTTATACG+TGG 0.621178 3_2:+62880587 Msa0416160:CDS
ACACCAAAGCCGCGACGCTG+AGG 0.624563 3_2:-62880831 None:intergenic
AGGAAGGTGTTGTGATGATG+AGG 0.625616 3_2:-62877203 None:intergenic
TATGTGAGTGAGTGAGTGAG+TGG 0.626457 3_2:+62877117 Msa0416160:five_prime_UTR
AGCGGCAAGAAGAGAAGTGG+TGG 0.627026 3_2:+62879426 Msa0416160:CDS
TTCAGCGGCAAGAAGAGAAG+TGG 0.628274 3_2:+62879423 Msa0416160:CDS
CAGCAAGATCCAATGCAACA+AGG 0.629004 3_2:+62880404 Msa0416160:CDS
TCCTGATGGAAAGAAACTTG+AGG 0.634337 3_2:+62879022 Msa0416160:CDS
ATTGATCTGATGTGATGTAT+CGG 0.636126 3_2:-62880101 None:intergenic
AGACCTGCTTCGGGAACACG+GGG 0.636721 3_2:-62879458 None:intergenic
GTGCAATATGTTCAGAAGAG+AGG 0.640548 3_2:-62880155 None:intergenic
TCAACTACAAAGTCTTCATG+GGG 0.644332 3_2:+62880261 Msa0416160:CDS
ATTGATTAGTCCTGTAAGAG+GGG 0.657034 3_2:+62880749 Msa0416160:CDS
ATATTTGGAAACCCTCCCCA+AGG 0.663884 3_2:+62879595 Msa0416160:CDS
GAGACTAAAACAAAGACATG+TGG 0.664012 3_2:+62880885 Msa0416160:CDS
GTGCCAAATGGTGCTTTGTG+TGG 0.665179 3_2:-62880702 None:intergenic
CTTGTGAGAAGAAAGAAATG+TGG 0.666461 3_2:+62878928 Msa0416160:CDS
GGCCGAACCTTCTGAATCAG+CGG 0.670869 3_2:-62879384 None:intergenic
AACGTCAAACCTCAGCGTCG+CGG 0.676876 3_2:+62880822 Msa0416160:CDS
TTCTGAAGTAGAAATTGACG+AGG 0.692550 3_2:-62877487 None:intergenic
TTAGAAGTGAGACCTTGGGG+AGG 0.695345 3_2:-62879607 None:intergenic
GTTGTGATGATGAGGACGTG+TGG 0.702050 3_2:-62877195 None:intergenic
ACAATCAAGTAGGCACTCCG+AGG 0.706887 3_2:-62880127 None:intergenic
TTGAGAATAGGCCAACCAAG+AGG 0.709258 3_2:-62877534 None:intergenic
GACATGTGGCAATTCAACTG+AGG 0.716254 3_2:+62880899 Msa0416160:CDS
GATAAATAGCAGCTTCCACG+CGG 0.726168 3_2:-62880191 None:intergenic
ACTCGAGATTGCAAACCGCG+TGG 0.746691 3_2:+62880176 Msa0416160:CDS
CAACTACAAAGTCTTCATGG+GGG 0.781366 3_2:+62880262 Msa0416160:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAATGTAAATTAAT+TGG - chr3_2:62879299-62879318 None:intergenic 10.0%
!! AAAAGAAAATGTAAATTAAT+TGG - chr3_2:62879299-62879318 None:intergenic 10.0%
!!! ATTTTCAAAGTTTGAAAAAA+TGG - chr3_2:62877072-62877091 None:intergenic 15.0%
!!! GTTTTATTCTGTAATTAAAT+TGG + chr3_2:62877894-62877913 Msa0416160:intron 15.0%
!! ATCATAATAATTCACATATA+TGG - chr3_2:62879089-62879108 None:intergenic 15.0%
!!! TATTTTATCAATTTACAGAA+TGG + chr3_2:62880051-62880070 Msa0416160:intron 15.0%
!! GATATATAATTGTATAGAAT+TGG - chr3_2:62880432-62880451 None:intergenic 15.0%
!!! ATTTTCAAAGTTTGAAAAAA+TGG - chr3_2:62877072-62877091 None:intergenic 15.0%
!!! GTTTTATTCTGTAATTAAAT+TGG + chr3_2:62877894-62877913 Msa0416160:intron 15.0%
!! ATCATAATAATTCACATATA+TGG - chr3_2:62879089-62879108 None:intergenic 15.0%
!!! TATTTTATCAATTTACAGAA+TGG + chr3_2:62880051-62880070 Msa0416160:intron 15.0%
!! GATATATAATTGTATAGAAT+TGG - chr3_2:62880432-62880451 None:intergenic 15.0%
!! TTTGAAAAAATATAGGATGT+TGG - chr3_2:62877254-62877273 None:intergenic 20.0%
!! AGACAAGTTTGAAAAAATAT+AGG - chr3_2:62877261-62877280 None:intergenic 20.0%
!!! AAAAGTTTTTGAAATGGAAA+AGG - chr3_2:62877334-62877353 None:intergenic 20.0%
!! AAATCTCAAAAGAAAAAAGA+TGG + chr3_2:62877393-62877412 Msa0416160:CDS 20.0%
!! AATCTCAAAAGAAAAAAGAT+GGG + chr3_2:62877394-62877413 Msa0416160:CDS 20.0%
!! TATTCTGTAATTAAATTGGT+TGG + chr3_2:62877898-62877917 Msa0416160:intron 20.0%
!!! GATTTTTAAGTGCTAATTAT+TGG + chr3_2:62877973-62877992 Msa0416160:intron 20.0%
!! TGTTTCAATCCAAAAAAAAA+AGG - chr3_2:62878005-62878024 None:intergenic 20.0%
!! AAAATTTGTCAACTACAATA+TGG - chr3_2:62878166-62878185 None:intergenic 20.0%
!!! TAATTATGTGTTTCTTTTCA+TGG + chr3_2:62878240-62878259 Msa0416160:intron 20.0%
!!! TAAAATTGATTTTGACATGT+TGG + chr3_2:62878293-62878312 Msa0416160:intron 20.0%
!!! AATATCTATTTGAGTTGATT+AGG + chr3_2:62878318-62878337 Msa0416160:intron 20.0%
!! TGTTATTAATTCCAAAAGAA+TGG - chr3_2:62878481-62878500 None:intergenic 20.0%
!!! ATGGTGTTATTAATTTCAAA+AGG + chr3_2:62878651-62878670 Msa0416160:intron 20.0%
!! TGTTATTAATTTCAAAAGGA+TGG + chr3_2:62878655-62878674 Msa0416160:intron 20.0%
!!! TGATTATGATGTTTCTAATA+TGG + chr3_2:62879105-62879124 Msa0416160:intron 20.0%
!!! TTTACATTTTCTTTTAACAC+AGG + chr3_2:62879304-62879323 Msa0416160:intron 20.0%
!! TATTTATCTTGGTCATAAAA+TGG - chr3_2:62879663-62879682 None:intergenic 20.0%
!!! ATTTTATGACCAAGATAAAT+AGG + chr3_2:62879662-62879681 Msa0416160:intron 20.0%
!!! TTTTATGACCAAGATAAATA+GGG + chr3_2:62879663-62879682 Msa0416160:intron 20.0%
!! AAAATGTGTCAATGTTAAAA+AGG - chr3_2:62880481-62880500 None:intergenic 20.0%
!! ACTACTACCAAATAAAATAT+TGG - chr3_2:62881048-62881067 None:intergenic 20.0%
!! TTTGAAAAAATATAGGATGT+TGG - chr3_2:62877254-62877273 None:intergenic 20.0%
!! AGACAAGTTTGAAAAAATAT+AGG - chr3_2:62877261-62877280 None:intergenic 20.0%
!!! AAAAGTTTTTGAAATGGAAA+AGG - chr3_2:62877334-62877353 None:intergenic 20.0%
!! AAATCTCAAAAGAAAAAAGA+TGG + chr3_2:62877393-62877412 Msa0416160:CDS 20.0%
!! AATCTCAAAAGAAAAAAGAT+GGG + chr3_2:62877394-62877413 Msa0416160:CDS 20.0%
!! TATTCTGTAATTAAATTGGT+TGG + chr3_2:62877898-62877917 Msa0416160:intron 20.0%
!!! GATTTTTAAGTGCTAATTAT+TGG + chr3_2:62877973-62877992 Msa0416160:intron 20.0%
!! TGTTTCAATCCAAAAAAAAA+AGG - chr3_2:62878005-62878024 None:intergenic 20.0%
!! AAAATTTGTCAACTACAATA+TGG - chr3_2:62878166-62878185 None:intergenic 20.0%
!!! TAATTATGTGTTTCTTTTCA+TGG + chr3_2:62878240-62878259 Msa0416160:intron 20.0%
!!! TAAAATTGATTTTGACATGT+TGG + chr3_2:62878293-62878312 Msa0416160:intron 20.0%
!!! AATATCTATTTGAGTTGATT+AGG + chr3_2:62878318-62878337 Msa0416160:intron 20.0%
!! TGTTATTAATTCCAAAAGAA+TGG - chr3_2:62878481-62878500 None:intergenic 20.0%
!!! ATGGTGTTATTAATTTCAAA+AGG + chr3_2:62878651-62878670 Msa0416160:intron 20.0%
!! TGTTATTAATTTCAAAAGGA+TGG + chr3_2:62878655-62878674 Msa0416160:intron 20.0%
!!! TGATTATGATGTTTCTAATA+TGG + chr3_2:62879105-62879124 Msa0416160:intron 20.0%
!!! TTTACATTTTCTTTTAACAC+AGG + chr3_2:62879304-62879323 Msa0416160:intron 20.0%
!! TATTTATCTTGGTCATAAAA+TGG - chr3_2:62879663-62879682 None:intergenic 20.0%
!!! ATTTTATGACCAAGATAAAT+AGG + chr3_2:62879662-62879681 Msa0416160:intron 20.0%
!!! TTTTATGACCAAGATAAATA+GGG + chr3_2:62879663-62879682 Msa0416160:intron 20.0%
!! AAAATGTGTCAATGTTAAAA+AGG - chr3_2:62880481-62880500 None:intergenic 20.0%
!! ACTACTACCAAATAAAATAT+TGG - chr3_2:62881048-62881067 None:intergenic 20.0%
!!! ATGTTGGTTTTAACTGTTTA+AGG - chr3_2:62877238-62877257 None:intergenic 25.0%
!!! GGTAAGAAAAGTTTTTGAAA+TGG - chr3_2:62877340-62877359 None:intergenic 25.0%
! AAACAAACACAAATCAAACT+TGG + chr3_2:62877605-62877624 Msa0416160:CDS 25.0%
!!! TGGATTTGTCCTTTTTTTTT+TGG + chr3_2:62877993-62878012 Msa0416160:intron 25.0%
!! GTAGTTGACAAATTTTCTTT+TGG + chr3_2:62878170-62878189 Msa0416160:intron 25.0%
!!! TTCTTTTGGTTTGTTTAAGT+TGG + chr3_2:62878184-62878203 Msa0416160:intron 25.0%
! TTAAGTGTTAAAAACACGTT+TGG - chr3_2:62878392-62878411 None:intergenic 25.0%
!!! CTAACACTCTTTTTTTTGAT+TGG + chr3_2:62878504-62878523 Msa0416160:intron 25.0%
! TTGTAAAAGAGAGTTCAATT+TGG - chr3_2:62878771-62878790 None:intergenic 25.0%
! CATACAACTTATTGTTTGTT+TGG - chr3_2:62878832-62878851 None:intergenic 25.0%
! TTGTTGAATTAATACCTTCT+TGG + chr3_2:62878991-62879010 Msa0416160:CDS 25.0%
! AAAGAAACTTGAGGTAAATT+TGG + chr3_2:62879031-62879050 Msa0416160:intron 25.0%
! GTCTTTCTATATGAAATCAA+TGG - chr3_2:62879720-62879739 None:intergenic 25.0%
! TTAATTGACAGAAGATTAAC+TGG - chr3_2:62879999-62880018 None:intergenic 25.0%
!! ACATTTTACTCAAACATTTC+AGG + chr3_2:62880494-62880513 Msa0416160:intron 25.0%
!!! TTTTATTGTTGTTGTTGTTG+TGG - chr3_2:62880791-62880810 None:intergenic 25.0%
! CCAAATAAAATATTGGTGAA+TGG - chr3_2:62881041-62881060 None:intergenic 25.0%
!! CCATTCACCAATATTTTATT+TGG + chr3_2:62881038-62881057 Msa0416160:three_prime_UTR 25.0%
!! TTACTTAAATCTGAAGTAGT+TGG + chr3_2:62881095-62881114 Msa0416160:three_prime_UTR 25.0%
!!! ATGTTGGTTTTAACTGTTTA+AGG - chr3_2:62877238-62877257 None:intergenic 25.0%
!!! GGTAAGAAAAGTTTTTGAAA+TGG - chr3_2:62877340-62877359 None:intergenic 25.0%
! AAACAAACACAAATCAAACT+TGG + chr3_2:62877605-62877624 Msa0416160:CDS 25.0%
!!! TGGATTTGTCCTTTTTTTTT+TGG + chr3_2:62877993-62878012 Msa0416160:intron 25.0%
!! GTAGTTGACAAATTTTCTTT+TGG + chr3_2:62878170-62878189 Msa0416160:intron 25.0%
!!! TTCTTTTGGTTTGTTTAAGT+TGG + chr3_2:62878184-62878203 Msa0416160:intron 25.0%
! TTAAGTGTTAAAAACACGTT+TGG - chr3_2:62878392-62878411 None:intergenic 25.0%
!!! CTAACACTCTTTTTTTTGAT+TGG + chr3_2:62878504-62878523 Msa0416160:intron 25.0%
! TTGTAAAAGAGAGTTCAATT+TGG - chr3_2:62878771-62878790 None:intergenic 25.0%
! CATACAACTTATTGTTTGTT+TGG - chr3_2:62878832-62878851 None:intergenic 25.0%
! TTGTTGAATTAATACCTTCT+TGG + chr3_2:62878991-62879010 Msa0416160:CDS 25.0%
! AAAGAAACTTGAGGTAAATT+TGG + chr3_2:62879031-62879050 Msa0416160:intron 25.0%
! GTCTTTCTATATGAAATCAA+TGG - chr3_2:62879720-62879739 None:intergenic 25.0%
! TTAATTGACAGAAGATTAAC+TGG - chr3_2:62879999-62880018 None:intergenic 25.0%
!! ACATTTTACTCAAACATTTC+AGG + chr3_2:62880494-62880513 Msa0416160:intron 25.0%
!!! TTTTATTGTTGTTGTTGTTG+TGG - chr3_2:62880791-62880810 None:intergenic 25.0%
! CCAAATAAAATATTGGTGAA+TGG - chr3_2:62881041-62881060 None:intergenic 25.0%
!! CCATTCACCAATATTTTATT+TGG + chr3_2:62881038-62881057 Msa0416160:three_prime_UTR 25.0%
!! TTACTTAAATCTGAAGTAGT+TGG + chr3_2:62881095-62881114 Msa0416160:three_prime_UTR 25.0%
TTTAAGGATGTTTGAAAGGA+AGG - chr3_2:62877222-62877241 None:intergenic 30.0%
ACTGTTTAAGGATGTTTGAA+AGG - chr3_2:62877226-62877245 None:intergenic 30.0%
TGAAATGGAAAAGGTGAAAT+GGG - chr3_2:62877325-62877344 None:intergenic 30.0%
TTGAAATGGAAAAGGTGAAA+TGG - chr3_2:62877326-62877345 None:intergenic 30.0%
! AACTTTTCTTACCTCAAAGA+TGG + chr3_2:62877347-62877366 Msa0416160:exon 30.0%
AGATAAAGTTTCCATCTTTG+AGG - chr3_2:62877361-62877380 None:intergenic 30.0%
GAAGTTGAAGCTAAATCAAA+TGG + chr3_2:62877507-62877526 Msa0416160:CDS 30.0%
AACAGATGTTGATATGATGA+AGG + chr3_2:62878021-62878040 Msa0416160:intron 30.0%
AGATTTGCAAAATTGTTGCT+AGG + chr3_2:62878046-62878065 Msa0416160:CDS 30.0%
AATGCCATTACTAATCTTTG+TGG + chr3_2:62878121-62878140 Msa0416160:CDS 30.0%
CATACCACAAAGATTAGTAA+TGG - chr3_2:62878128-62878147 None:intergenic 30.0%
! ATGTGTTTCTTTTCATGGTA+AGG + chr3_2:62878245-62878264 Msa0416160:intron 30.0%
ATTCCAAAAGAATGGTAGTT+TGG - chr3_2:62878473-62878492 None:intergenic 30.0%
ATTTCAAAAGGATGGTAGTT+TGG + chr3_2:62878663-62878682 Msa0416160:intron 30.0%
! TTCATGTAAAAGTGAGTTGA+AGG - chr3_2:62878727-62878746 None:intergenic 30.0%
AAAGAGAGTTCAATTTGGAA+TGG - chr3_2:62878766-62878785 None:intergenic 30.0%
! TATCGAATCTTGTTCTTTTG+CGG + chr3_2:62879220-62879239 Msa0416160:intron 30.0%
CAGGAAATATTAGACAGTTT+CGG + chr3_2:62879323-62879342 Msa0416160:intron 30.0%
!! GAATTTTGGTATGTTGATCA+AGG + chr3_2:62879353-62879372 Msa0416160:CDS 30.0%
TGGAATAGGCTATAGAAAAA+AGG - chr3_2:62879643-62879662 None:intergenic 30.0%
TCTTGGTCATAAAATGGAAT+AGG - chr3_2:62879657-62879676 None:intergenic 30.0%
ATCTGAATCCCTATTTATCT+TGG - chr3_2:62879674-62879693 None:intergenic 30.0%
! AACCATTAGTTTAGATCGAA+TGG + chr3_2:62879779-62879798 Msa0416160:intron 30.0%
AACCATTCGATCTAAACTAA+TGG - chr3_2:62879784-62879803 None:intergenic 30.0%
CATTACCCTATTATAGACTT+GGG + chr3_2:62879871-62879890 Msa0416160:intron 30.0%
ATATGCCCAAGTCTATAATA+GGG - chr3_2:62879879-62879898 None:intergenic 30.0%
TTAACTGGAGAATATTTCAC+AGG - chr3_2:62879984-62880003 None:intergenic 30.0%
ATCGGTAAATAAAATCTCCA+AGG - chr3_2:62880086-62880105 None:intergenic 30.0%
ATTGATCTGATGTGATGTAT+CGG - chr3_2:62880104-62880123 None:intergenic 30.0%
ATGAAGACTTTGTAGTTGAA+CGG - chr3_2:62880260-62880279 None:intergenic 30.0%
TTCAACTACAAAGTCTTCAT+GGG + chr3_2:62880260-62880279 Msa0416160:CDS 30.0%
TTCTAAATTCCTTGAAGCAT+CGG + chr3_2:62880349-62880368 Msa0416160:CDS 30.0%
ACATTCAGATAGATTTGCAT+TGG + chr3_2:62880623-62880642 Msa0416160:CDS 30.0%
! AGAGCTTTGTCAAATTATCT+TGG + chr3_2:62880858-62880877 Msa0416160:CDS 30.0%
!! GTTCTGTTTTCTTGTTACTT+GGG - chr3_2:62880938-62880957 None:intergenic 30.0%
! TGTTCTGTTTTCTTGTTACT+TGG - chr3_2:62880939-62880958 None:intergenic 30.0%
TGAATGGATACAAATGAAAG+GGG - chr3_2:62881025-62881044 None:intergenic 30.0%
GTGAATGGATACAAATGAAA+GGG - chr3_2:62881026-62881045 None:intergenic 30.0%
TTTAAGGATGTTTGAAAGGA+AGG - chr3_2:62877222-62877241 None:intergenic 30.0%
ACTGTTTAAGGATGTTTGAA+AGG - chr3_2:62877226-62877245 None:intergenic 30.0%
TGAAATGGAAAAGGTGAAAT+GGG - chr3_2:62877325-62877344 None:intergenic 30.0%
TTGAAATGGAAAAGGTGAAA+TGG - chr3_2:62877326-62877345 None:intergenic 30.0%
! AACTTTTCTTACCTCAAAGA+TGG + chr3_2:62877347-62877366 Msa0416160:exon 30.0%
AGATAAAGTTTCCATCTTTG+AGG - chr3_2:62877361-62877380 None:intergenic 30.0%
GAAGTTGAAGCTAAATCAAA+TGG + chr3_2:62877507-62877526 Msa0416160:CDS 30.0%
AACAGATGTTGATATGATGA+AGG + chr3_2:62878021-62878040 Msa0416160:intron 30.0%
AGATTTGCAAAATTGTTGCT+AGG + chr3_2:62878046-62878065 Msa0416160:CDS 30.0%
AATGCCATTACTAATCTTTG+TGG + chr3_2:62878121-62878140 Msa0416160:CDS 30.0%
CATACCACAAAGATTAGTAA+TGG - chr3_2:62878128-62878147 None:intergenic 30.0%
! ATGTGTTTCTTTTCATGGTA+AGG + chr3_2:62878245-62878264 Msa0416160:intron 30.0%
ATTCCAAAAGAATGGTAGTT+TGG - chr3_2:62878473-62878492 None:intergenic 30.0%
ATTTCAAAAGGATGGTAGTT+TGG + chr3_2:62878663-62878682 Msa0416160:intron 30.0%
! TTCATGTAAAAGTGAGTTGA+AGG - chr3_2:62878727-62878746 None:intergenic 30.0%
AAAGAGAGTTCAATTTGGAA+TGG - chr3_2:62878766-62878785 None:intergenic 30.0%
! TATCGAATCTTGTTCTTTTG+CGG + chr3_2:62879220-62879239 Msa0416160:intron 30.0%
CAGGAAATATTAGACAGTTT+CGG + chr3_2:62879323-62879342 Msa0416160:intron 30.0%
!! GAATTTTGGTATGTTGATCA+AGG + chr3_2:62879353-62879372 Msa0416160:CDS 30.0%
TGGAATAGGCTATAGAAAAA+AGG - chr3_2:62879643-62879662 None:intergenic 30.0%
TCTTGGTCATAAAATGGAAT+AGG - chr3_2:62879657-62879676 None:intergenic 30.0%
ATCTGAATCCCTATTTATCT+TGG - chr3_2:62879674-62879693 None:intergenic 30.0%
! AACCATTAGTTTAGATCGAA+TGG + chr3_2:62879779-62879798 Msa0416160:intron 30.0%
AACCATTCGATCTAAACTAA+TGG - chr3_2:62879784-62879803 None:intergenic 30.0%
CATTACCCTATTATAGACTT+GGG + chr3_2:62879871-62879890 Msa0416160:intron 30.0%
ATATGCCCAAGTCTATAATA+GGG - chr3_2:62879879-62879898 None:intergenic 30.0%
TTAACTGGAGAATATTTCAC+AGG - chr3_2:62879984-62880003 None:intergenic 30.0%
ATCGGTAAATAAAATCTCCA+AGG - chr3_2:62880086-62880105 None:intergenic 30.0%
ATTGATCTGATGTGATGTAT+CGG - chr3_2:62880104-62880123 None:intergenic 30.0%
ATGAAGACTTTGTAGTTGAA+CGG - chr3_2:62880260-62880279 None:intergenic 30.0%
TTCAACTACAAAGTCTTCAT+GGG + chr3_2:62880260-62880279 Msa0416160:CDS 30.0%
TTCTAAATTCCTTGAAGCAT+CGG + chr3_2:62880349-62880368 Msa0416160:CDS 30.0%
ACATTCAGATAGATTTGCAT+TGG + chr3_2:62880623-62880642 Msa0416160:CDS 30.0%
! AGAGCTTTGTCAAATTATCT+TGG + chr3_2:62880858-62880877 Msa0416160:CDS 30.0%
!! GTTCTGTTTTCTTGTTACTT+GGG - chr3_2:62880938-62880957 None:intergenic 30.0%
! TGTTCTGTTTTCTTGTTACT+TGG - chr3_2:62880939-62880958 None:intergenic 30.0%
TGAATGGATACAAATGAAAG+GGG - chr3_2:62881025-62881044 None:intergenic 30.0%
GTGAATGGATACAAATGAAA+GGG - chr3_2:62881026-62881045 None:intergenic 30.0%
CGGGAAAAAAAGAACAACAT+GGG - chr3_2:62877287-62877306 None:intergenic 35.0%
ACGGGAAAAAAAGAACAACA+TGG - chr3_2:62877288-62877307 None:intergenic 35.0%
!! ATGGGTTTGTTAGAACTCAA+CGG - chr3_2:62877307-62877326 None:intergenic 35.0%
! TCTAGAACTACAAGTTTCAG+TGG + chr3_2:62877453-62877472 Msa0416160:CDS 35.0%
!! TTCTGAAGTAGAAATTGACG+AGG - chr3_2:62877490-62877509 None:intergenic 35.0%
AAATCAAATGGTACTCCTCT+TGG + chr3_2:62877519-62877538 Msa0416160:CDS 35.0%
!! GAAAGTGTAGCTTTGAGAAT+AGG - chr3_2:62877549-62877568 None:intergenic 35.0%
ACACAAATCAAACTTGGAAG+TGG + chr3_2:62877611-62877630 Msa0416160:CDS 35.0%
ACGCACAAAATGTACAACTA+TGG + chr3_2:62877635-62877654 Msa0416160:CDS 35.0%
!! ACTATGGATGTAAAAGTGTC+AGG + chr3_2:62877651-62877670 Msa0416160:CDS 35.0%
ATATGTCAGGTTCAGGAAAA+GGG + chr3_2:62878074-62878093 Msa0416160:CDS 35.0%
!! TGGTTTGTTTAAGTTGGCAA+AGG + chr3_2:62878190-62878209 Msa0416160:intron 35.0%
GCTACAGTCATAAAAAAGCT+GGG - chr3_2:62878430-62878449 None:intergenic 35.0%
TGCTACAGTCATAAAAAAGC+TGG - chr3_2:62878431-62878450 None:intergenic 35.0%
! GTACCAAACTACCATTCTTT+TGG + chr3_2:62878467-62878486 Msa0416160:intron 35.0%
ATACCAATACCATCATGTCT+AGG + chr3_2:62878559-62878578 Msa0416160:intron 35.0%
GTGTCCAATCAAAAAAAGAG+TGG + chr3_2:62878623-62878642 Msa0416160:intron 35.0%
TCCAATCAAAAAAAGAGTGG+TGG + chr3_2:62878626-62878645 Msa0416160:intron 35.0%
!!! ACCACCACTCTTTTTTTGAT+TGG - chr3_2:62878630-62878649 None:intergenic 35.0%
CAAAAAAAGAGTGGTGGTAA+TGG + chr3_2:62878632-62878651 Msa0416160:intron 35.0%
AACATGTAGCTACTGCATTT+GGG + chr3_2:62878880-62878899 Msa0416160:intron 35.0%
CACATTTCTTTCTTCTCACA+AGG - chr3_2:62878930-62878949 None:intergenic 35.0%
CTTGTGAGAAGAAAGAAATG+TGG + chr3_2:62878928-62878947 Msa0416160:CDS 35.0%
ATGGTGATAGTTTCAGCATT+GGG - chr3_2:62879070-62879089 None:intergenic 35.0%
TATGGTGATAGTTTCAGCAT+TGG - chr3_2:62879071-62879090 None:intergenic 35.0%
TCTAATATGGTTCATTCTGC+AGG + chr3_2:62879118-62879137 Msa0416160:intron 35.0%
TTGATGCAAATATCTGTCCT+GGG - chr3_2:62879158-62879177 None:intergenic 35.0%
TATGTTAGAAGTGAGACCTT+GGG - chr3_2:62879614-62879633 None:intergenic 35.0%
TTATGTTAGAAGTGAGACCT+TGG - chr3_2:62879615-62879634 None:intergenic 35.0%
TAGGGATTCAGATTTACACA+CGG + chr3_2:62879681-62879700 Msa0416160:intron 35.0%
TAGTTTAGATCGAATGGTTG+AGG + chr3_2:62879785-62879804 Msa0416160:intron 35.0%
! GAAACTTGTTTCCGATGAAT+AGG + chr3_2:62879837-62879856 Msa0416160:intron 35.0%
GATCTCATACACCTATTCAT+CGG - chr3_2:62879851-62879870 None:intergenic 35.0%
CCAAGTCTATAATAGGGTAA+TGG - chr3_2:62879873-62879892 None:intergenic 35.0%
CCATTACCCTATTATAGACT+TGG + chr3_2:62879870-62879889 Msa0416160:intron 35.0%
GATATGCCCAAGTCTATAAT+AGG - chr3_2:62879880-62879899 None:intergenic 35.0%
TTATAGACTTGGGCATATCT+TGG + chr3_2:62879881-62879900 Msa0416160:intron 35.0%
AGAGGTCTAAACAATCAAGT+AGG - chr3_2:62880140-62880159 None:intergenic 35.0%
! TGGAAGCTGCTATTTATCTA+TGG + chr3_2:62880196-62880215 Msa0416160:CDS 35.0%
GTTCAACTACAAAGTCTTCA+TGG + chr3_2:62880259-62880278 Msa0416160:CDS 35.0%
TCAACTACAAAGTCTTCATG+GGG + chr3_2:62880261-62880280 Msa0416160:CDS 35.0%
ACTCAAACATTTCAGGATGT+TGG + chr3_2:62880501-62880520 Msa0416160:intron 35.0%
!!! AGAAAGCTACTCTAGAGTTT+TGG + chr3_2:62880536-62880555 Msa0416160:CDS 35.0%
!! CATCGATGATTTGTTATACG+TGG + chr3_2:62880587-62880606 Msa0416160:CDS 35.0%
!! ATTTGCATTGGTTCCTACAA+CGG + chr3_2:62880635-62880654 Msa0416160:CDS 35.0%
! CATTGATTAGTCCTGTAAGA+GGG + chr3_2:62880748-62880767 Msa0416160:CDS 35.0%
! ATTGATTAGTCCTGTAAGAG+GGG + chr3_2:62880749-62880768 Msa0416160:CDS 35.0%
! TATTGTTGTTGTTGTTGTGG+AGG - chr3_2:62880788-62880807 None:intergenic 35.0%
GAGACTAAAACAAAGACATG+TGG + chr3_2:62880885-62880904 Msa0416160:CDS 35.0%
CCTCTAAATGCTGTGAAATT+CGG + chr3_2:62880960-62880979 Msa0416160:CDS 35.0%
GGTGAATGGATACAAATGAA+AGG - chr3_2:62881027-62881046 None:intergenic 35.0%
CGGGAAAAAAAGAACAACAT+GGG - chr3_2:62877287-62877306 None:intergenic 35.0%
ACGGGAAAAAAAGAACAACA+TGG - chr3_2:62877288-62877307 None:intergenic 35.0%
!! ATGGGTTTGTTAGAACTCAA+CGG - chr3_2:62877307-62877326 None:intergenic 35.0%
! TCTAGAACTACAAGTTTCAG+TGG + chr3_2:62877453-62877472 Msa0416160:CDS 35.0%
!! TTCTGAAGTAGAAATTGACG+AGG - chr3_2:62877490-62877509 None:intergenic 35.0%
AAATCAAATGGTACTCCTCT+TGG + chr3_2:62877519-62877538 Msa0416160:CDS 35.0%
!! GAAAGTGTAGCTTTGAGAAT+AGG - chr3_2:62877549-62877568 None:intergenic 35.0%
ACACAAATCAAACTTGGAAG+TGG + chr3_2:62877611-62877630 Msa0416160:CDS 35.0%
ACGCACAAAATGTACAACTA+TGG + chr3_2:62877635-62877654 Msa0416160:CDS 35.0%
!! ACTATGGATGTAAAAGTGTC+AGG + chr3_2:62877651-62877670 Msa0416160:CDS 35.0%
ATATGTCAGGTTCAGGAAAA+GGG + chr3_2:62878074-62878093 Msa0416160:CDS 35.0%
!! TGGTTTGTTTAAGTTGGCAA+AGG + chr3_2:62878190-62878209 Msa0416160:intron 35.0%
GCTACAGTCATAAAAAAGCT+GGG - chr3_2:62878430-62878449 None:intergenic 35.0%
TGCTACAGTCATAAAAAAGC+TGG - chr3_2:62878431-62878450 None:intergenic 35.0%
! GTACCAAACTACCATTCTTT+TGG + chr3_2:62878467-62878486 Msa0416160:intron 35.0%
ATACCAATACCATCATGTCT+AGG + chr3_2:62878559-62878578 Msa0416160:intron 35.0%
GTGTCCAATCAAAAAAAGAG+TGG + chr3_2:62878623-62878642 Msa0416160:intron 35.0%
TCCAATCAAAAAAAGAGTGG+TGG + chr3_2:62878626-62878645 Msa0416160:intron 35.0%
!!! ACCACCACTCTTTTTTTGAT+TGG - chr3_2:62878630-62878649 None:intergenic 35.0%
CAAAAAAAGAGTGGTGGTAA+TGG + chr3_2:62878632-62878651 Msa0416160:intron 35.0%
AACATGTAGCTACTGCATTT+GGG + chr3_2:62878880-62878899 Msa0416160:intron 35.0%
CACATTTCTTTCTTCTCACA+AGG - chr3_2:62878930-62878949 None:intergenic 35.0%
CTTGTGAGAAGAAAGAAATG+TGG + chr3_2:62878928-62878947 Msa0416160:CDS 35.0%
ATGGTGATAGTTTCAGCATT+GGG - chr3_2:62879070-62879089 None:intergenic 35.0%
TATGGTGATAGTTTCAGCAT+TGG - chr3_2:62879071-62879090 None:intergenic 35.0%
TCTAATATGGTTCATTCTGC+AGG + chr3_2:62879118-62879137 Msa0416160:intron 35.0%
TTGATGCAAATATCTGTCCT+GGG - chr3_2:62879158-62879177 None:intergenic 35.0%
TATGTTAGAAGTGAGACCTT+GGG - chr3_2:62879614-62879633 None:intergenic 35.0%
TTATGTTAGAAGTGAGACCT+TGG - chr3_2:62879615-62879634 None:intergenic 35.0%
TAGGGATTCAGATTTACACA+CGG + chr3_2:62879681-62879700 Msa0416160:intron 35.0%
TAGTTTAGATCGAATGGTTG+AGG + chr3_2:62879785-62879804 Msa0416160:intron 35.0%
! GAAACTTGTTTCCGATGAAT+AGG + chr3_2:62879837-62879856 Msa0416160:intron 35.0%
GATCTCATACACCTATTCAT+CGG - chr3_2:62879851-62879870 None:intergenic 35.0%
CCAAGTCTATAATAGGGTAA+TGG - chr3_2:62879873-62879892 None:intergenic 35.0%
CCATTACCCTATTATAGACT+TGG + chr3_2:62879870-62879889 Msa0416160:intron 35.0%
GATATGCCCAAGTCTATAAT+AGG - chr3_2:62879880-62879899 None:intergenic 35.0%
TTATAGACTTGGGCATATCT+TGG + chr3_2:62879881-62879900 Msa0416160:intron 35.0%
AGAGGTCTAAACAATCAAGT+AGG - chr3_2:62880140-62880159 None:intergenic 35.0%
! TGGAAGCTGCTATTTATCTA+TGG + chr3_2:62880196-62880215 Msa0416160:CDS 35.0%
GTTCAACTACAAAGTCTTCA+TGG + chr3_2:62880259-62880278 Msa0416160:CDS 35.0%
TCAACTACAAAGTCTTCATG+GGG + chr3_2:62880261-62880280 Msa0416160:CDS 35.0%
ACTCAAACATTTCAGGATGT+TGG + chr3_2:62880501-62880520 Msa0416160:intron 35.0%
!!! AGAAAGCTACTCTAGAGTTT+TGG + chr3_2:62880536-62880555 Msa0416160:CDS 35.0%
!! CATCGATGATTTGTTATACG+TGG + chr3_2:62880587-62880606 Msa0416160:CDS 35.0%
!! ATTTGCATTGGTTCCTACAA+CGG + chr3_2:62880635-62880654 Msa0416160:CDS 35.0%
! CATTGATTAGTCCTGTAAGA+GGG + chr3_2:62880748-62880767 Msa0416160:CDS 35.0%
! ATTGATTAGTCCTGTAAGAG+GGG + chr3_2:62880749-62880768 Msa0416160:CDS 35.0%
! TATTGTTGTTGTTGTTGTGG+AGG - chr3_2:62880788-62880807 None:intergenic 35.0%
GAGACTAAAACAAAGACATG+TGG + chr3_2:62880885-62880904 Msa0416160:CDS 35.0%
CCTCTAAATGCTGTGAAATT+CGG + chr3_2:62880960-62880979 Msa0416160:CDS 35.0%
GGTGAATGGATACAAATGAA+AGG - chr3_2:62881027-62881046 None:intergenic 35.0%
!! ACGTGTGGCTTTTTAGGAAA+AGG - chr3_2:62877183-62877202 None:intergenic 40.0%
!! TGGGTTTGTTAGAACTCAAC+GGG - chr3_2:62877306-62877325 None:intergenic 40.0%
!! TTGTGTCACTGATTCAAGTG+TGG + chr3_2:62877428-62877447 Msa0416160:CDS 40.0%
TGTCAGACACTAACAAGTGT+CGG - chr3_2:62877747-62877766 None:intergenic 40.0%
TGACGTATTAGTGTTGTGTC+TGG + chr3_2:62877825-62877844 Msa0416160:intron 40.0%
TCTGGTGTCTATGTATGTGT+CGG + chr3_2:62877843-62877862 Msa0416160:intron 40.0%
! ATGTATGTGTCGGTCTTCAT+AGG + chr3_2:62877853-62877872 Msa0416160:intron 40.0%
TTGCTAGGTGAAGATATGTC+AGG + chr3_2:62878061-62878080 Msa0416160:CDS 40.0%
GATATGTCAGGTTCAGGAAA+AGG + chr3_2:62878073-62878092 Msa0416160:CDS 40.0%
TATGTCAGGTTCAGGAAAAG+GGG + chr3_2:62878075-62878094 Msa0416160:CDS 40.0%
TCCACTAGTATTGTGACATG+TGG + chr3_2:62878535-62878554 Msa0416160:intron 40.0%
CATCCTAGACATGATGGTAT+TGG - chr3_2:62878565-62878584 None:intergenic 40.0%
CAATACCATCATGTCTAGGA+TGG + chr3_2:62878563-62878582 Msa0416160:intron 40.0%
CAATACCATCCTAGACATGA+TGG - chr3_2:62878571-62878590 None:intergenic 40.0%
! CATCATGTCTAGGATGGTAT+TGG + chr3_2:62878569-62878588 Msa0416160:intron 40.0%
GAACATGTAGCTACTGCATT+TGG + chr3_2:62878879-62878898 Msa0416160:intron 40.0%
TCTTTCTTCTCACAAGGTAG+TGG - chr3_2:62878924-62878943 None:intergenic 40.0%
AGAAATGTGGCAAAGAGAGA+TGG + chr3_2:62878941-62878960 Msa0416160:CDS 40.0%
TCAGGAAATGTTTGCCAAGA+AGG - chr3_2:62879008-62879027 None:intergenic 40.0%
TCTTGGCAAACATTTCCTGA+TGG + chr3_2:62879008-62879027 Msa0416160:CDS 40.0%
TCCTGATGGAAAGAAACTTG+AGG + chr3_2:62879022-62879041 Msa0416160:CDS 40.0%
ACCTCAAGTTTCTTTCCATC+AGG - chr3_2:62879026-62879045 None:intergenic 40.0%
GTTGATGCAAATATCTGTCC+TGG - chr3_2:62879159-62879178 None:intergenic 40.0%
CATGTTATCGAGTTTGCGAA+GGG - chr3_2:62879189-62879208 None:intergenic 40.0%
! GTTTCGGAGCTACAGAATTT+TGG + chr3_2:62879339-62879358 Msa0416160:CDS 40.0%
!! CTGAATTGACTTGCGAAAAG+AGG - chr3_2:62879408-62879427 None:intergenic 40.0%
! CTTTTCGCAAGTCAATTCAG+CGG + chr3_2:62879408-62879427 Msa0416160:CDS 40.0%
GTCTATCAACAGCATTGCTT+TGG + chr3_2:62879550-62879569 Msa0416160:CDS 40.0%
GGAAGTTCCTGAGTCATATT+TGG + chr3_2:62879580-62879599 Msa0416160:CDS 40.0%
AGGGTTTCCAAATATGACTC+AGG - chr3_2:62879590-62879609 None:intergenic 40.0%
ATGTTAGAAGTGAGACCTTG+GGG - chr3_2:62879613-62879632 None:intergenic 40.0%
CTGTATGATGCAATTACTGC+AGG + chr3_2:62879815-62879834 Msa0416160:intron 40.0%
ACTGGAGAATATTTCACAGG+AGG - chr3_2:62879981-62880000 None:intergenic 40.0%
CACATCAGATCAATTCTCCT+CGG + chr3_2:62880110-62880129 Msa0416160:CDS 40.0%
GTGCAATATGTTCAGAAGAG+AGG - chr3_2:62880158-62880177 None:intergenic 40.0%
GACTTTGTAGTTGAACGGTT+GGG - chr3_2:62880255-62880274 None:intergenic 40.0%
AGACTTTGTAGTTGAACGGT+TGG - chr3_2:62880256-62880275 None:intergenic 40.0%
CAACTACAAAGTCTTCATGG+GGG + chr3_2:62880262-62880281 Msa0416160:CDS 40.0%
GTTAAGGACTTCATGCTTGA+TGG + chr3_2:62880288-62880307 Msa0416160:CDS 40.0%
! AGGTAGTTTGAGTTAAGCCA+GGG - chr3_2:62880377-62880396 None:intergenic 40.0%
! AAGGTAGTTTGAGTTAAGCC+AGG - chr3_2:62880378-62880397 None:intergenic 40.0%
TGGCTTAACTCAAACTACCT+TGG + chr3_2:62880377-62880396 Msa0416160:CDS 40.0%
GAATTGGAACCTTGTTGCAT+TGG - chr3_2:62880416-62880435 None:intergenic 40.0%
!! TTTGCATTGGTTCCTACAAC+GGG + chr3_2:62880636-62880655 Msa0416160:CDS 40.0%
CCTCTTACAGGACTAATCAA+TGG - chr3_2:62880750-62880769 None:intergenic 40.0%
! CCATTGATTAGTCCTGTAAG+AGG + chr3_2:62880747-62880766 Msa0416160:CDS 40.0%
! TTGTTGTTGTTGTGGAGGAA+AGG - chr3_2:62880783-62880802 None:intergenic 40.0%
CCGAATTTCACAGCATTTAG+AGG - chr3_2:62880963-62880982 None:intergenic 40.0%
!! ACGTGTGGCTTTTTAGGAAA+AGG - chr3_2:62877183-62877202 None:intergenic 40.0%
!! TGGGTTTGTTAGAACTCAAC+GGG - chr3_2:62877306-62877325 None:intergenic 40.0%
!! TTGTGTCACTGATTCAAGTG+TGG + chr3_2:62877428-62877447 Msa0416160:CDS 40.0%
TGTCAGACACTAACAAGTGT+CGG - chr3_2:62877747-62877766 None:intergenic 40.0%
TGACGTATTAGTGTTGTGTC+TGG + chr3_2:62877825-62877844 Msa0416160:intron 40.0%
TCTGGTGTCTATGTATGTGT+CGG + chr3_2:62877843-62877862 Msa0416160:intron 40.0%
! ATGTATGTGTCGGTCTTCAT+AGG + chr3_2:62877853-62877872 Msa0416160:intron 40.0%
TTGCTAGGTGAAGATATGTC+AGG + chr3_2:62878061-62878080 Msa0416160:CDS 40.0%
GATATGTCAGGTTCAGGAAA+AGG + chr3_2:62878073-62878092 Msa0416160:CDS 40.0%
TATGTCAGGTTCAGGAAAAG+GGG + chr3_2:62878075-62878094 Msa0416160:CDS 40.0%
TCCACTAGTATTGTGACATG+TGG + chr3_2:62878535-62878554 Msa0416160:intron 40.0%
CATCCTAGACATGATGGTAT+TGG - chr3_2:62878565-62878584 None:intergenic 40.0%
CAATACCATCATGTCTAGGA+TGG + chr3_2:62878563-62878582 Msa0416160:intron 40.0%
CAATACCATCCTAGACATGA+TGG - chr3_2:62878571-62878590 None:intergenic 40.0%
! CATCATGTCTAGGATGGTAT+TGG + chr3_2:62878569-62878588 Msa0416160:intron 40.0%
GAACATGTAGCTACTGCATT+TGG + chr3_2:62878879-62878898 Msa0416160:intron 40.0%
TCTTTCTTCTCACAAGGTAG+TGG - chr3_2:62878924-62878943 None:intergenic 40.0%
AGAAATGTGGCAAAGAGAGA+TGG + chr3_2:62878941-62878960 Msa0416160:CDS 40.0%
TCAGGAAATGTTTGCCAAGA+AGG - chr3_2:62879008-62879027 None:intergenic 40.0%
TCTTGGCAAACATTTCCTGA+TGG + chr3_2:62879008-62879027 Msa0416160:CDS 40.0%
TCCTGATGGAAAGAAACTTG+AGG + chr3_2:62879022-62879041 Msa0416160:CDS 40.0%
ACCTCAAGTTTCTTTCCATC+AGG - chr3_2:62879026-62879045 None:intergenic 40.0%
GTTGATGCAAATATCTGTCC+TGG - chr3_2:62879159-62879178 None:intergenic 40.0%
CATGTTATCGAGTTTGCGAA+GGG - chr3_2:62879189-62879208 None:intergenic 40.0%
! GTTTCGGAGCTACAGAATTT+TGG + chr3_2:62879339-62879358 Msa0416160:CDS 40.0%
!! CTGAATTGACTTGCGAAAAG+AGG - chr3_2:62879408-62879427 None:intergenic 40.0%
! CTTTTCGCAAGTCAATTCAG+CGG + chr3_2:62879408-62879427 Msa0416160:CDS 40.0%
GTCTATCAACAGCATTGCTT+TGG + chr3_2:62879550-62879569 Msa0416160:CDS 40.0%
GGAAGTTCCTGAGTCATATT+TGG + chr3_2:62879580-62879599 Msa0416160:CDS 40.0%
AGGGTTTCCAAATATGACTC+AGG - chr3_2:62879590-62879609 None:intergenic 40.0%
ATGTTAGAAGTGAGACCTTG+GGG - chr3_2:62879613-62879632 None:intergenic 40.0%
CTGTATGATGCAATTACTGC+AGG + chr3_2:62879815-62879834 Msa0416160:intron 40.0%
ACTGGAGAATATTTCACAGG+AGG - chr3_2:62879981-62880000 None:intergenic 40.0%
CACATCAGATCAATTCTCCT+CGG + chr3_2:62880110-62880129 Msa0416160:CDS 40.0%
GTGCAATATGTTCAGAAGAG+AGG - chr3_2:62880158-62880177 None:intergenic 40.0%
GACTTTGTAGTTGAACGGTT+GGG - chr3_2:62880255-62880274 None:intergenic 40.0%
AGACTTTGTAGTTGAACGGT+TGG - chr3_2:62880256-62880275 None:intergenic 40.0%
CAACTACAAAGTCTTCATGG+GGG + chr3_2:62880262-62880281 Msa0416160:CDS 40.0%
GTTAAGGACTTCATGCTTGA+TGG + chr3_2:62880288-62880307 Msa0416160:CDS 40.0%
! AGGTAGTTTGAGTTAAGCCA+GGG - chr3_2:62880377-62880396 None:intergenic 40.0%
! AAGGTAGTTTGAGTTAAGCC+AGG - chr3_2:62880378-62880397 None:intergenic 40.0%
TGGCTTAACTCAAACTACCT+TGG + chr3_2:62880377-62880396 Msa0416160:CDS 40.0%
GAATTGGAACCTTGTTGCAT+TGG - chr3_2:62880416-62880435 None:intergenic 40.0%
!! TTTGCATTGGTTCCTACAAC+GGG + chr3_2:62880636-62880655 Msa0416160:CDS 40.0%
CCTCTTACAGGACTAATCAA+TGG - chr3_2:62880750-62880769 None:intergenic 40.0%
! CCATTGATTAGTCCTGTAAG+AGG + chr3_2:62880747-62880766 Msa0416160:CDS 40.0%
! TTGTTGTTGTTGTGGAGGAA+AGG - chr3_2:62880783-62880802 None:intergenic 40.0%
CCGAATTTCACAGCATTTAG+AGG - chr3_2:62880963-62880982 None:intergenic 40.0%
TATGTGAGTGAGTGAGTGAG+TGG + chr3_2:62877117-62877136 Msa0416160:five_prime_UTR 45.0%
! ATGAGGACGTGTGGCTTTTT+AGG - chr3_2:62877189-62877208 None:intergenic 45.0%
!! AGGAAGGTGTTGTGATGATG+AGG - chr3_2:62877206-62877225 None:intergenic 45.0%
CAAATGGTACTCCTCTTGGT+TGG + chr3_2:62877523-62877542 Msa0416160:CDS 45.0%
TTGAGAATAGGCCAACCAAG+AGG - chr3_2:62877537-62877556 None:intergenic 45.0%
! AGAACAAGAACGCTTTGAGC+TGG - chr3_2:62877571-62877590 None:intergenic 45.0%
GGTGAAGATATGTCAGGTTC+AGG + chr3_2:62878067-62878086 Msa0416160:CDS 45.0%
AAAAGGGGTTTGCACTGCTT+TGG + chr3_2:62878090-62878109 Msa0416160:CDS 45.0%
GCCACATGTCACAATACTAG+TGG - chr3_2:62878539-62878558 None:intergenic 45.0%
!! TGTCTAGGATGGTATTGGTG+TGG + chr3_2:62878574-62878593 Msa0416160:intron 45.0%
GGCATGTGTCTCGATACTAT+TGG + chr3_2:62878595-62878614 Msa0416160:intron 45.0%
CTACTGCATTTGGGCAACTT+TGG + chr3_2:62878889-62878908 Msa0416160:CDS 45.0%
TGTGGCAAAGAGAGATGGAA+TGG + chr3_2:62878946-62878965 Msa0416160:CDS 45.0%
! TTCTGCAGGTAATGACTTGC+AGG + chr3_2:62879132-62879151 Msa0416160:intron 45.0%
GCATGTTATCGAGTTTGCGA+AGG - chr3_2:62879190-62879209 None:intergenic 45.0%
!! GGCACACTAGTAGTTCTAGT+CGG + chr3_2:62879241-62879260 Msa0416160:intron 45.0%
!! ATTGTAGCCGCTGATTCAGA+AGG + chr3_2:62879377-62879396 Msa0416160:CDS 45.0%
CAGCATTGCTTTGGCTGAAA+TGG + chr3_2:62879559-62879578 Msa0416160:CDS 45.0%
ATATTTGGAAACCCTCCCCA+AGG + chr3_2:62879595-62879614 Msa0416160:CDS 45.0%
CAGAATGGAAGAACTTGCCT+TGG + chr3_2:62880066-62880085 Msa0416160:intron 45.0%
GATAAATAGCAGCTTCCACG+CGG - chr3_2:62880194-62880213 None:intergenic 45.0%
GTAGTTGAACGGTTGGGATT+AGG - chr3_2:62880249-62880268 None:intergenic 45.0%
TACAAAGTCTTCATGGGGGA+TGG + chr3_2:62880266-62880285 Msa0416160:CDS 45.0%
TTGGATCTTGCTGGTATCCA+AGG - chr3_2:62880397-62880416 None:intergenic 45.0%
CTTGTTGCATTGGATCTTGC+TGG - chr3_2:62880406-62880425 None:intergenic 45.0%
CAGCAAGATCCAATGCAACA+AGG + chr3_2:62880404-62880423 Msa0416160:CDS 45.0%
!!! CTCTAGAGTTTTGGAGAGCA+TGG + chr3_2:62880545-62880564 Msa0416160:CDS 45.0%
GGTTCCTACAACGGGTAATA+CGG + chr3_2:62880644-62880663 Msa0416160:CDS 45.0%
GAAACCGTATTACCCGTTGT+AGG - chr3_2:62880651-62880670 None:intergenic 45.0%
CCTGAGACAGACACTGAAAA+TGG - chr3_2:62880678-62880697 None:intergenic 45.0%
! CCATTTTCAGTGTCTGTCTC+AGG + chr3_2:62880675-62880694 Msa0416160:CDS 45.0%
! ACTCCACACAAAGCACCATT+TGG + chr3_2:62880699-62880718 Msa0416160:CDS 45.0%
GAAAACTTAGGCGTGCCAAA+TGG - chr3_2:62880717-62880736 None:intergenic 45.0%
GGACTAATCAATGGCACAGA+AGG - chr3_2:62880741-62880760 None:intergenic 45.0%
GACATGTGGCAATTCAACTG+AGG + chr3_2:62880899-62880918 Msa0416160:CDS 45.0%
GGCAATTCAACTGAGGTCAA+TGG + chr3_2:62880906-62880925 Msa0416160:CDS 45.0%
TATGTGAGTGAGTGAGTGAG+TGG + chr3_2:62877117-62877136 Msa0416160:five_prime_UTR 45.0%
! ATGAGGACGTGTGGCTTTTT+AGG - chr3_2:62877189-62877208 None:intergenic 45.0%
!! AGGAAGGTGTTGTGATGATG+AGG - chr3_2:62877206-62877225 None:intergenic 45.0%
CAAATGGTACTCCTCTTGGT+TGG + chr3_2:62877523-62877542 Msa0416160:CDS 45.0%
TTGAGAATAGGCCAACCAAG+AGG - chr3_2:62877537-62877556 None:intergenic 45.0%
! AGAACAAGAACGCTTTGAGC+TGG - chr3_2:62877571-62877590 None:intergenic 45.0%
GGTGAAGATATGTCAGGTTC+AGG + chr3_2:62878067-62878086 Msa0416160:CDS 45.0%
AAAAGGGGTTTGCACTGCTT+TGG + chr3_2:62878090-62878109 Msa0416160:CDS 45.0%
GCCACATGTCACAATACTAG+TGG - chr3_2:62878539-62878558 None:intergenic 45.0%
!! TGTCTAGGATGGTATTGGTG+TGG + chr3_2:62878574-62878593 Msa0416160:intron 45.0%
GGCATGTGTCTCGATACTAT+TGG + chr3_2:62878595-62878614 Msa0416160:intron 45.0%
CTACTGCATTTGGGCAACTT+TGG + chr3_2:62878889-62878908 Msa0416160:CDS 45.0%
TGTGGCAAAGAGAGATGGAA+TGG + chr3_2:62878946-62878965 Msa0416160:CDS 45.0%
! TTCTGCAGGTAATGACTTGC+AGG + chr3_2:62879132-62879151 Msa0416160:intron 45.0%
GCATGTTATCGAGTTTGCGA+AGG - chr3_2:62879190-62879209 None:intergenic 45.0%
!! GGCACACTAGTAGTTCTAGT+CGG + chr3_2:62879241-62879260 Msa0416160:intron 45.0%
!! ATTGTAGCCGCTGATTCAGA+AGG + chr3_2:62879377-62879396 Msa0416160:CDS 45.0%
CAGCATTGCTTTGGCTGAAA+TGG + chr3_2:62879559-62879578 Msa0416160:CDS 45.0%
ATATTTGGAAACCCTCCCCA+AGG + chr3_2:62879595-62879614 Msa0416160:CDS 45.0%
CAGAATGGAAGAACTTGCCT+TGG + chr3_2:62880066-62880085 Msa0416160:intron 45.0%
GATAAATAGCAGCTTCCACG+CGG - chr3_2:62880194-62880213 None:intergenic 45.0%
GTAGTTGAACGGTTGGGATT+AGG - chr3_2:62880249-62880268 None:intergenic 45.0%
TACAAAGTCTTCATGGGGGA+TGG + chr3_2:62880266-62880285 Msa0416160:CDS 45.0%
TTGGATCTTGCTGGTATCCA+AGG - chr3_2:62880397-62880416 None:intergenic 45.0%
CTTGTTGCATTGGATCTTGC+TGG - chr3_2:62880406-62880425 None:intergenic 45.0%
CAGCAAGATCCAATGCAACA+AGG + chr3_2:62880404-62880423 Msa0416160:CDS 45.0%
!!! CTCTAGAGTTTTGGAGAGCA+TGG + chr3_2:62880545-62880564 Msa0416160:CDS 45.0%
GGTTCCTACAACGGGTAATA+CGG + chr3_2:62880644-62880663 Msa0416160:CDS 45.0%
GAAACCGTATTACCCGTTGT+AGG - chr3_2:62880651-62880670 None:intergenic 45.0%
CCTGAGACAGACACTGAAAA+TGG - chr3_2:62880678-62880697 None:intergenic 45.0%
! CCATTTTCAGTGTCTGTCTC+AGG + chr3_2:62880675-62880694 Msa0416160:CDS 45.0%
! ACTCCACACAAAGCACCATT+TGG + chr3_2:62880699-62880718 Msa0416160:CDS 45.0%
GAAAACTTAGGCGTGCCAAA+TGG - chr3_2:62880717-62880736 None:intergenic 45.0%
GGACTAATCAATGGCACAGA+AGG - chr3_2:62880741-62880760 None:intergenic 45.0%
GACATGTGGCAATTCAACTG+AGG + chr3_2:62880899-62880918 Msa0416160:CDS 45.0%
GGCAATTCAACTGAGGTCAA+TGG + chr3_2:62880906-62880925 Msa0416160:CDS 45.0%
! GTTGTGATGATGAGGACGTG+TGG - chr3_2:62877198-62877217 None:intergenic 50.0%
AGACTGACACCTCTGATCGA+AGG + chr3_2:62877709-62877728 Msa0416160:intron 50.0%
TTATCGAGTTTGCGAAGGGC+TGG - chr3_2:62879185-62879204 None:intergenic 50.0%
!! AGCCGCTGATTCAGAAGGTT+CGG + chr3_2:62879382-62879401 Msa0416160:CDS 50.0%
TTCAGCGGCAAGAAGAGAAG+TGG + chr3_2:62879423-62879442 Msa0416160:CDS 50.0%
TTCTCACTGAGACCTGCTTC+GGG - chr3_2:62879470-62879489 None:intergenic 50.0%
CTTCTCACTGAGACCTGCTT+CGG - chr3_2:62879471-62879490 None:intergenic 50.0%
TAGAAGTGAGACCTTGGGGA+GGG - chr3_2:62879609-62879628 None:intergenic 50.0%
TTAGAAGTGAGACCTTGGGG+AGG - chr3_2:62879610-62879629 None:intergenic 50.0%
ACAATCAAGTAGGCACTCCG+AGG - chr3_2:62880130-62880149 None:intergenic 50.0%
!! TGGGATTAGGCGTTGATCTG+TGG - chr3_2:62880236-62880255 None:intergenic 50.0%
GTCTTCATGGGGGATGGTTA+AGG + chr3_2:62880272-62880291 Msa0416160:CDS 50.0%
GTGCCAAATGGTGCTTTGTG+TGG - chr3_2:62880705-62880724 None:intergenic 50.0%
GGCACAGAAGGCGAAAACTT+AGG - chr3_2:62880729-62880748 None:intergenic 50.0%
! GTTGTGATGATGAGGACGTG+TGG - chr3_2:62877198-62877217 None:intergenic 50.0%
AGACTGACACCTCTGATCGA+AGG + chr3_2:62877709-62877728 Msa0416160:intron 50.0%
TTATCGAGTTTGCGAAGGGC+TGG - chr3_2:62879185-62879204 None:intergenic 50.0%
!! AGCCGCTGATTCAGAAGGTT+CGG + chr3_2:62879382-62879401 Msa0416160:CDS 50.0%
TTCAGCGGCAAGAAGAGAAG+TGG + chr3_2:62879423-62879442 Msa0416160:CDS 50.0%
TTCTCACTGAGACCTGCTTC+GGG - chr3_2:62879470-62879489 None:intergenic 50.0%
CTTCTCACTGAGACCTGCTT+CGG - chr3_2:62879471-62879490 None:intergenic 50.0%
TAGAAGTGAGACCTTGGGGA+GGG - chr3_2:62879609-62879628 None:intergenic 50.0%
TTAGAAGTGAGACCTTGGGG+AGG - chr3_2:62879610-62879629 None:intergenic 50.0%
ACAATCAAGTAGGCACTCCG+AGG - chr3_2:62880130-62880149 None:intergenic 50.0%
!! TGGGATTAGGCGTTGATCTG+TGG - chr3_2:62880236-62880255 None:intergenic 50.0%
GTCTTCATGGGGGATGGTTA+AGG + chr3_2:62880272-62880291 Msa0416160:CDS 50.0%
GTGCCAAATGGTGCTTTGTG+TGG - chr3_2:62880705-62880724 None:intergenic 50.0%
GGCACAGAAGGCGAAAACTT+AGG - chr3_2:62880729-62880748 None:intergenic 50.0%
CCAGACACACCTTCGATCAG+AGG - chr3_2:62877721-62877740 None:intergenic 55.0%
! CCTCTGATCGAAGGTGTGTC+TGG + chr3_2:62877718-62877737 Msa0416160:intron 55.0%
! AGGTAATGACTTGCAGGCCC+AGG + chr3_2:62879138-62879157 Msa0416160:intron 55.0%
GGCCGAACCTTCTGAATCAG+CGG - chr3_2:62879387-62879406 None:intergenic 55.0%
AGCGGCAAGAAGAGAAGTGG+TGG + chr3_2:62879426-62879445 Msa0416160:CDS 55.0%
TGAGACCTGCTTCGGGAACA+CGG - chr3_2:62879463-62879482 None:intergenic 55.0%
ACTCGAGATTGCAAACCGCG+TGG + chr3_2:62880176-62880195 Msa0416160:CDS 55.0%
!! TCCTTGAAGCATCGGTTCCC+TGG + chr3_2:62880357-62880376 Msa0416160:CDS 55.0%
GGAGTTCTCTCCCCTCTTAC+AGG - chr3_2:62880762-62880781 None:intergenic 55.0%
AACGTCAAACCTCAGCGTCG+CGG + chr3_2:62880822-62880841 Msa0416160:CDS 55.0%
CCAGACACACCTTCGATCAG+AGG - chr3_2:62877721-62877740 None:intergenic 55.0%
! CCTCTGATCGAAGGTGTGTC+TGG + chr3_2:62877718-62877737 Msa0416160:intron 55.0%
! AGGTAATGACTTGCAGGCCC+AGG + chr3_2:62879138-62879157 Msa0416160:intron 55.0%
GGCCGAACCTTCTGAATCAG+CGG - chr3_2:62879387-62879406 None:intergenic 55.0%
AGCGGCAAGAAGAGAAGTGG+TGG + chr3_2:62879426-62879445 Msa0416160:CDS 55.0%
TGAGACCTGCTTCGGGAACA+CGG - chr3_2:62879463-62879482 None:intergenic 55.0%
ACTCGAGATTGCAAACCGCG+TGG + chr3_2:62880176-62880195 Msa0416160:CDS 55.0%
!! TCCTTGAAGCATCGGTTCCC+TGG + chr3_2:62880357-62880376 Msa0416160:CDS 55.0%
GGAGTTCTCTCCCCTCTTAC+AGG - chr3_2:62880762-62880781 None:intergenic 55.0%
AACGTCAAACCTCAGCGTCG+CGG + chr3_2:62880822-62880841 Msa0416160:CDS 55.0%
CGAGTTTGCGAAGGGCTGGA+AGG - chr3_2:62879181-62879200 None:intergenic 60.0%
TGCTTCGGGAACACGGGGAA+CGG - chr3_2:62879456-62879475 None:intergenic 60.0%
AGACCTGCTTCGGGAACACG+GGG - chr3_2:62879461-62879480 None:intergenic 60.0%
GAGACCTGCTTCGGGAACAC+GGG - chr3_2:62879462-62879481 None:intergenic 60.0%
CGCGCGCTTGCAGAGAATGT+AGG - chr3_2:62879916-62879935 None:intergenic 60.0%
GCCAGGGAACCGATGCTTCA+AGG - chr3_2:62880361-62880380 None:intergenic 60.0%
AAACCTCAGCGTCGCGGCTT+TGG + chr3_2:62880828-62880847 Msa0416160:CDS 60.0%
CGAGTTTGCGAAGGGCTGGA+AGG - chr3_2:62879181-62879200 None:intergenic 60.0%
TGCTTCGGGAACACGGGGAA+CGG - chr3_2:62879456-62879475 None:intergenic 60.0%
AGACCTGCTTCGGGAACACG+GGG - chr3_2:62879461-62879480 None:intergenic 60.0%
GAGACCTGCTTCGGGAACAC+GGG - chr3_2:62879462-62879481 None:intergenic 60.0%
CGCGCGCTTGCAGAGAATGT+AGG - chr3_2:62879916-62879935 None:intergenic 60.0%
GCCAGGGAACCGATGCTTCA+AGG - chr3_2:62880361-62880380 None:intergenic 60.0%
AAACCTCAGCGTCGCGGCTT+TGG + chr3_2:62880828-62880847 Msa0416160:CDS 60.0%
CTTCGGGAACACGGGGAACG+GGG - chr3_2:62879454-62879473 None:intergenic 65.0%
GCTTCGGGAACACGGGGAAC+GGG - chr3_2:62879455-62879474 None:intergenic 65.0%
GTTCCCCGTGTTCCCGAAGC+AGG + chr3_2:62879455-62879474 Msa0416160:CDS 65.0%
ACACCAAAGCCGCGACGCTG+AGG - chr3_2:62880834-62880853 None:intergenic 65.0%
CTTCGGGAACACGGGGAACG+GGG - chr3_2:62879454-62879473 None:intergenic 65.0%
GCTTCGGGAACACGGGGAAC+GGG - chr3_2:62879455-62879474 None:intergenic 65.0%
GTTCCCCGTGTTCCCGAAGC+AGG + chr3_2:62879455-62879474 Msa0416160:CDS 65.0%
ACACCAAAGCCGCGACGCTG+AGG - chr3_2:62880834-62880853 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 62877062 62881173 62877062 ID=Msa0416160;Name=Msa0416160
chr3_2 mRNA 62877062 62881173 62877062 ID=Msa0416160-mRNA-1;Parent=Msa0416160;Name=Msa0416160-mRNA-1;_AED=0.08;_eAED=0.08;_QI=304|1|1|1|1|1|7|187|590
chr3_2 exon 62877062 62877672 62877062 ID=Msa0416160-mRNA-1:exon:13581;Parent=Msa0416160-mRNA-1
chr3_2 exon 62878026 62878142 62878026 ID=Msa0416160-mRNA-1:exon:13582;Parent=Msa0416160-mRNA-1
chr3_2 exon 62878889 62879043 62878889 ID=Msa0416160-mRNA-1:exon:13583;Parent=Msa0416160-mRNA-1
chr3_2 exon 62879140 62879214 62879140 ID=Msa0416160-mRNA-1:exon:13584;Parent=Msa0416160-mRNA-1
chr3_2 exon 62879326 62879616 62879326 ID=Msa0416160-mRNA-1:exon:13585;Parent=Msa0416160-mRNA-1
chr3_2 exon 62880069 62880425 62880069 ID=Msa0416160-mRNA-1:exon:13586;Parent=Msa0416160-mRNA-1
chr3_2 exon 62880516 62881173 62880516 ID=Msa0416160-mRNA-1:exon:13587;Parent=Msa0416160-mRNA-1
chr3_2 five_prime_UTR 62877062 62877365 62877062 ID=Msa0416160-mRNA-1:five_prime_utr;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62877366 62877672 62877366 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62878026 62878142 62878026 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62878889 62879043 62878889 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62879140 62879214 62879140 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62879326 62879616 62879326 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62880069 62880425 62880069 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 CDS 62880516 62880986 62880516 ID=Msa0416160-mRNA-1:cds;Parent=Msa0416160-mRNA-1
chr3_2 three_prime_UTR 62880987 62881173 62880987 ID=Msa0416160-mRNA-1:three_prime_utr;Parent=Msa0416160-mRNA-1
Gene Sequence

>Msa0416160

ATGGAAACTTTATCTAAAAACAACGAAAAATCTCAAAAGAAAAAAGATGGGTCTCGTTCTTCTTGTGTCACTGATTCAAGTGTGGAGTCTAGAACTACAAGTTTCAGTGGATCTAATTCAACCTCGTCAATTTCTACTTCAGAAGTTGAAGCTAAATCAAATGGTACTCCTCTTGGTTGGCCTATTCTCAAAGCTACACTTTCCAGCTCAAAGCGTTCTTGTTCTTCTGATGACAAAGAAAACAAACACAAATCAAACTTGGAAGTGGAACGCACAAAATGTACAACTATGGATGTAAAAGTGTCAGATGTTGATATGATGAAGGAAAGATTTGCAAAATTGTTGCTAGGTGAAGATATGTCAGGTTCAGGAAAAGGGGTTTGCACTGCTTTGGCAATATCTAATGCCATTACTAATCTTTGTGCTACTGCATTTGGGCAACTTTGGAGACTAGAACCACTACCTTGTGAGAAGAAAGAAATGTGGCAAAGAGAGATGGAATGGCTTATTAGTGTCAGTGATCACATTGTTGAATTAATACCTTCTTGGCAAACATTTCCTGATGGAAAGAAACTTGAGGTAATGACTTGCAGGCCCAGGACAGATATTTGCATCAACCTTCCAGCCCTTCGCAAACTCGATAACATGCTACTCGAAATATTAGACAGTTTCGGAGCTACAGAATTTTGGTATGTTGATCAAGGAATTGTAGCCGCTGATTCAGAAGGTTCGGCCTCTTTTCGCAAGTCAATTCAGCGGCAAGAAGAGAAGTGGTGGCTCCCCGTTCCCCGTGTTCCCGAAGCAGGTCTCAGTGAGAAGTCAAGAAAGAAGTTGAATCACTCTAGAGAAAGTGCAAGTCAAATTCTCAAAGCAGCTATGTCTATCAACAGCATTGCTTTGGCTGAAATGGAAGTTCCTGAGTCATATTTGGAAACCCTCCCCAAGAATGGAAGAACTTGCCTTGGAGATTTTATTTACCGATACATCACATCAGATCAATTCTCCTCGGAGTGCCTACTTGATTGTTTAGACCTCTCTTCTGAACATATTGCACTCGAGATTGCAAACCGCGTGGAAGCTGCTATTTATCTATGGCGTCGAAGATCTAACCACAGATCAACGCCTAATCCCAACCGTTCAACTACAAAGTCTTCATGGGGGATGGTTAAGGACTTCATGCTTGATGGAGATAAGAGAGAATTGCTAGCACATAGAGCTGAAAACATTCTAAATTCCTTGAAGCATCGGTTCCCTGGCTTAACTCAAACTACCTTGGATACCAGCAAGATCCAATGCAACAAGGATGTTGGAAAATCTATTCTAGAAAGCTACTCTAGAGTTTTGGAGAGCATGGCTTATAACATTATATCACGCATCGATGATTTGTTATACGTGGATGAGTTAACAAAACATTCAGATAGATTTGCATTGGTTCCTACAACGGGTAATACGGTTTCACGTCCATTTTCAGTGTCTGTCTCAGGCACTCCACACAAAGCACCATTTGGCACGCCTAAGTTTTCGCCTTCTGTGCCATTGATTAGTCCTGTAAGAGGGGAGAGAACTCCTTTCCTCCACAACAACAACAACAATAAAAACAATGTCAACAACGTCAAACCTCAGCGTCGCGGCTTTGGTGTGAGAAGAGCTTTGTCAAATTATCTTGGTGTTGAGACTAAAACAAAGACATGTGGCAATTCAACTGAGGTCAATGGTTCAAACCCAAGTAACAAGAAAACAGAACAACCTCTAAATGCTGTGAAATTCGGTTGA

Protein sequence

>Msa0416160

METLSKNNEKSQKKKDGSRSSCVTDSSVESRTTSFSGSNSTSSISTSEVEAKSNGTPLGWPILKATLSSSKRSCSSDDKENKHKSNLEVERTKCTTMDVKVSDVDMMKERFAKLLLGEDMSGSGKGVCTALAISNAITNLCATAFGQLWRLEPLPCEKKEMWQREMEWLISVSDHIVELIPSWQTFPDGKKLEVMTCRPRTDICINLPALRKLDNMLLEILDSFGATEFWYVDQGIVAADSEGSASFRKSIQRQEEKWWLPVPRVPEAGLSEKSRKKLNHSRESASQILKAAMSINSIALAEMEVPESYLETLPKNGRTCLGDFIYRYITSDQFSSECLLDCLDLSSEHIALEIANRVEAAIYLWRRRSNHRSTPNPNRSTTKSSWGMVKDFMLDGDKRELLAHRAENILNSLKHRFPGLTQTTLDTSKIQCNKDVGKSILESYSRVLESMAYNIISRIDDLLYVDELTKHSDRFALVPTTGNTVSRPFSVSVSGTPHKAPFGTPKFSPSVPLISPVRGERTPFLHNNNNNKNNVNNVKPQRRGFGVRRALSNYLGVETKTKTCGNSTEVNGSNPSNKKTEQPLNAVKFG*