AlfalfaGEDB | Msa0901630

M. sativa cultivar zhongmu-4 / Msa0901630

KEGG: -
GO: -
PFAM: PF00249.34

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0901630	XP_003620926.1	94.576	295	10	2	1	295	1	289	0.0	561

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0901630	sp\|Q7XC57\|MYBS3_ORYSJ	54.706	170	58	5	1	162	1	159	2.15e-50	172

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0901630	G7KJT9	94.576	295	10	2	1	295	1	289	0.0	561

TFs/TRs:

Gene ID	Type	Classification
Msa0901630	TF	MYB-related

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0013050	Msa0901630	-0.804537	2.059545e-49	-8.615850e-47
Msa0032610	Msa0901630	0.815627	8.390457e-52	-8.615850e-47
Msa0638280	Msa0901630	0.803236	3.838079e-49	-8.615850e-47
Msa0638320	Msa0901630	0.803015	4.265506e-49	-8.615850e-47
Msa0647450	Msa0901630	-0.841543	4.458808e-58	-8.615850e-47
Msa0661190	Msa0901630	-0.806751	7.064886e-50	-8.615850e-47
Msa0701840	Msa0901630	-0.803106	4.084073e-49	-8.615850e-47
Msa0724560	Msa0901630	0.801761	7.731660e-49	-8.615850e-47
Msa0754720	Msa0901630	-0.803207	3.892644e-49	-8.615850e-47
Msa0842210	Msa0901630	0.804883	1.744004e-49	-8.615850e-47
Msa0148120	Msa0901630	0.809534	1.804180e-50	-8.615850e-47
Msa0156650	Msa0901630	-0.835665	1.470071e-56	-8.615850e-47
Msa0162770	Msa0901630	-0.807119	5.904559e-50	-8.615850e-47
Msa0169140	Msa0901630	-0.816133	6.470560e-52	-8.615850e-47
Msa0185640	Msa0901630	-0.808140	3.585385e-50	-8.615850e-47
Msa0200950	Msa0901630	-0.830622	2.647830e-55	-8.615850e-47
Msa0223380	Msa0901630	0.805378	1.374024e-49	-8.615850e-47
Msa0377530	Msa0901630	0.814623	1.401785e-51	-8.615850e-47
Msa0412970	Msa0901630	0.800993	1.110263e-48	-8.615850e-47
Msa0421780	Msa0901630	-0.833536	5.041573e-56	-8.615850e-47
Msa0442850	Msa0901630	0.824159	9.389647e-54	-8.615850e-47
Msa0467900	Msa0901630	-0.842231	2.933482e-58	-8.615850e-47
Msa0467960	Msa0901630	-0.805016	1.636095e-49	-8.615850e-47
Msa0473240	Msa0901630	0.819300	1.248362e-52	-8.615850e-47
Msa0258670	Msa0901630	-0.842221	2.951560e-58	-8.615850e-47
Msa0272480	Msa0901630	-0.810307	1.229912e-50	-8.615850e-47
Msa0288330	Msa0901630	0.808203	3.476319e-50	-8.615850e-47
Msa0312690	Msa0901630	-0.817619	3.002580e-52	-8.615850e-47
Msa0326670	Msa0901630	0.822295	2.556469e-53	-8.615850e-47
Msa0342340	Msa0901630	-0.805033	1.622752e-49	-8.615850e-47
Msa0344830	Msa0901630	0.826218	3.060387e-54	-8.615850e-47
Msa0517490	Msa0901630	0.821845	3.251047e-53	-8.615850e-47
Msa0531990	Msa0901630	-0.845584	3.708459e-59	-8.615850e-47
Msa0532100	Msa0901630	-0.841324	5.092500e-58	-8.615850e-47
Msa0535060	Msa0901630	0.800287	1.547203e-48	-8.615850e-47
Msa0540070	Msa0901630	0.801055	1.078349e-48	-8.615850e-47
Msa0553220	Msa0901630	-0.840104	1.063086e-57	-8.615850e-47
Msa0574760	Msa0901630	-0.866365	3.006889e-65	-8.615850e-47
Msa0585000	Msa0901630	-0.809661	1.694357e-50	-8.615850e-47
Msa0848900	Msa0901630	0.801790	7.624243e-49	-8.615850e-47
Msa0870150	Msa0901630	0.809773	1.602896e-50	-8.615850e-47
Msa0891040	Msa0901630	0.816720	4.781139e-52	-8.615850e-47
Msa0901630	Msa0925660	0.972274	1.684779e-134	-8.615850e-47
Msa0901630	Msa0930910	-0.870910	1.020542e-66	-8.615850e-47
Msa0901630	Msa0935850	0.824446	8.036097e-54	-8.615850e-47
Msa0901630	Msa0982270	0.800721	1.261905e-48	-8.615850e-47
Msa0901630	Msa0990960	0.828801	7.346184e-55	-8.615850e-47
Msa0901630	Msa1000300	0.801148	1.032476e-48	-8.615850e-47
Msa0901630	Msa1004900	-0.811843	5.714523e-51	-8.615850e-47
Msa0901630	Msa1021340	0.822781	1.971549e-53	-8.615850e-47
Msa0901630	Msa1040120	0.821234	4.500683e-53	-8.615850e-47
Msa0901630	Msa1054410	0.841893	3.604371e-58	-8.615850e-47
Msa0901630	Msa1072460	-0.813988	1.936833e-51	-8.615850e-47
Msa0901630	Msa1075220	-0.809578	1.765494e-50	-8.615850e-47
Msa0901630	Msa1077670	0.811633	6.351616e-51	-8.615850e-47
Msa0901630	Msa1116130	-0.805357	1.387873e-49	-8.615850e-47
Msa0901630	Msa1139000	-0.804874	1.751587e-49	-8.615850e-47
Msa0901630	Msa1162550	-0.810399	1.175353e-50	-8.615850e-47
Msa0901630	Msa1174870	0.812442	4.230440e-51	-8.615850e-47
Msa0901630	Msa1191470	-0.806997	6.266794e-50	-8.615850e-47
Msa0901630	Msa1204980	-0.812112	4.993272e-51	-8.615850e-47
Msa0901630	Msa1205010	-0.816516	5.310664e-52	-8.615850e-47
Msa0901630	Msa1234690	0.806734	7.124872e-50	-8.615850e-47
Msa0901630	Msa1234730	0.813737	2.200061e-51	-8.615850e-47
Msa0901630	Msa1256540	-0.808787	2.609246e-50	-8.615850e-47
Msa0901630	Msa1270960	-0.800339	1.509545e-48	-8.615850e-47
Msa0901630	Msa1296960	-0.805827	1.106358e-49	-8.615850e-47
Msa0901630	Msa1301650	0.825719	4.021307e-54	-8.615850e-47
Msa0901630	Msa1315110	0.822574	2.202498e-53	-8.615850e-47
Msa0901630	Msa1322190	0.804034	2.622037e-49	-8.615850e-47
Msa0901630	Msa1369530	0.834841	2.373217e-56	-8.615850e-47
Msa0901630	Msa1390120	0.813846	2.081004e-51	-8.615850e-47
Msa0901630	Msa1395230	-0.804282	2.327704e-49	-8.615850e-47
Msa0901630	Msa1395530	0.812338	4.459093e-51	-8.615850e-47
Msa0901630	Msa1427830	0.807661	4.533728e-50	-8.615850e-47
Msa0901630	Msa1447110	0.835225	1.899309e-56	-8.615850e-47
Msa0901630	Msa1451620	-0.802120	6.522075e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0901630	MtrunA17_Chr6g0488471	94.576	295	10	2	1	295	1	289	0.0	561
Msa0901630	MtrunA17_Chr8g0389241	50.318	314	103	13	1	295	1	280	1.59e-72	224
Msa0901630	MtrunA17_Chr2g0331031	52.717	184	55	5	1	162	1	174	9.66e-49	165
Msa0901630	MtrunA17_Chr4g0055931	48.108	185	74	4	1	175	1	173	2.68e-47	161
Msa0901630	MtrunA17_Chr5g0415191	48.555	173	70	4	1	162	3	167	2.06e-41	145
Msa0901630	MtrunA17_Chr3g0135671	44.565	184	82	5	1	177	3	173	2.11e-36	130
Msa0901630	MtrunA17_Chr1g0162081	60.784	102	33	2	91	185	116	217	4.81e-34	125
Msa0901630	MtrunA17_Chr4g0062741	73.239	71	19	0	91	161	132	202	8.68e-34	125
Msa0901630	MtrunA17_Chr7g0241761	78.873	71	15	0	91	161	134	204	3.17e-33	124
Msa0901630	MtrunA17_Chr4g0059701	48.780	164	69	5	32	187	15	171	1.85e-31	118
Msa0901630	MtrunA17_Chr3g0104071	73.611	72	19	0	91	162	141	212	2.09e-31	119
Msa0901630	MtrunA17_Chr5g0429521	73.611	72	19	0	91	162	126	197	3.03e-31	118
Msa0901630	MtrunA17_Chr1g0210471	71.429	70	20	0	92	161	119	188	2.54e-30	114
Msa0901630	MtrunA17_Chr5g0436501	69.863	73	20	1	91	161	119	191	5.18e-29	111
Msa0901630	MtrunA17_Chr3g0092621	60.976	82	30	1	82	161	67	148	1.78e-28	107
Msa0901630	MtrunA17_Chr6g0452791	67.797	59	19	0	97	155	80	138	1.92e-22	91.7
Msa0901630	MtrunA17_Chr5g0409841	52.857	70	31	1	93	160	88	157	3.24e-19	84.3
Msa0901630	MtrunA17_Chr5g0440731	50.704	71	32	1	93	160	101	171	6.20e-18	82.0
Msa0901630	MtrunA17_Chr5g0440741	55.385	65	26	1	99	160	102	166	1.64e-17	80.9
Msa0901630	MtrunA17_Chr5g0409831	58.929	56	23	0	93	148	73	128	1.03e-16	77.4
Msa0901630	MtrunA17_Chr8g0365011	51.948	77	23	2	99	161	94	170	3.51e-15	74.3
Msa0901630	MtrunA17_Chr1g0192061	50.633	79	33	3	99	174	63	138	3.86e-15	72.4
Msa0901630	MtrunA17_Chr8g0364731	64.912	57	18	1	107	161	11	67	4.77e-15	72.0
Msa0901630	MtrunA17_Chr5g0432921	47.500	80	38	3	99	175	115	193	1.96e-12	65.5
Msa0901630	MtrunA17_Chr5g0432941	54.688	64	25	3	99	159	115	177	7.20e-12	63.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0901630	AT5G56840.1	55.838	197	54	6	1	185	1	176	5.46e-61	194
Msa0901630	AT5G47390.1	52.907	172	60	4	1	162	1	161	2.56e-49	167
Msa0901630	AT5G61620.1	49.123	171	71	6	1	161	8	172	8.76e-46	157
Msa0901630	AT3G16350.1	40.323	310	117	11	1	257	1	295	3.68e-44	155
Msa0901630	AT1G70000.1	50.857	175	61	7	1	162	1	163	1.69e-42	147
Msa0901630	AT1G70000.2	50.857	175	61	7	1	162	1	163	1.69e-42	147
Msa0901630	AT1G49010.1	66.667	81	27	0	91	171	128	208	2.00e-33	124
Msa0901630	AT5G08520.1	67.949	78	25	0	91	168	112	189	6.58e-33	123
Msa0901630	AT2G38090.1	71.250	80	21	1	85	162	127	206	1.62e-32	122
Msa0901630	AT5G58900.1	60.417	96	38	0	92	187	136	231	7.39e-31	117
Msa0901630	AT5G01200.1	70.423	71	21	0	91	161	140	210	1.09e-29	114
Msa0901630	AT3G11280.2	69.014	71	22	0	91	161	121	191	1.74e-28	110
Msa0901630	AT3G11280.1	69.014	71	22	0	91	161	121	191	1.74e-28	110
Msa0901630	AT5G04760.1	65.714	70	24	0	92	161	94	163	3.34e-28	108
Msa0901630	AT5G05790.2	67.606	71	23	0	91	161	125	195	1.35e-27	108
Msa0901630	AT5G05790.1	67.606	71	23	0	91	161	125	195	1.35e-27	108
Msa0901630	AT1G19000.2	40.299	201	90	6	93	291	98	270	6.86e-27	106
Msa0901630	AT1G19000.1	40.299	201	90	6	93	291	98	270	6.86e-27	106
Msa0901630	AT1G74840.2	46.259	147	68	4	23	161	17	160	1.15e-26	105
Msa0901630	AT1G74840.1	46.259	147	68	4	23	161	17	160	2.65e-26	104
Msa0901630	AT5G23650.1	60.563	71	28	0	91	161	114	184	2.84e-23	97.8
Msa0901630	AT3G10580.2	56.627	83	34	1	93	175	91	171	7.21e-23	95.5
Msa0901630	AT3G10580.1	56.627	83	34	1	93	175	91	171	1.18e-22	95.5
Msa0901630	AT4G09450.1	57.971	69	29	0	93	161	87	155	8.30e-20	85.9
Msa0901630	AT3G10590.1	51.316	76	34	2	89	162	101	175	7.67e-16	75.1

Find 64 sgRNAs with CRISPR-Local

Find 242 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GCATCTACATTTGAAGAATT+TGG	0.184804	6_1:-98404992	None:intergenic
GCACACCAACACTATTTAAT+TGG	0.185566	6_1:-98402912	None:intergenic
GCTAATTAAGTCACACTAAT+TGG	0.200852	6_1:-98405100	None:intergenic
AATTACAAGTCCTTGAATTA+TGG	0.245021	6_1:-98403140	None:intergenic
TCCCCAAGTTCATTTCTTAT+TGG	0.248835	6_1:+98405076	Msa0901630:CDS
CCCCAAGTTCATTTCTTATT+GGG	0.272509	6_1:+98405077	Msa0901630:CDS
TTGTTCCATGTTATTTGAAT+TGG	0.302002	6_1:-98405044	None:intergenic
CATATCATAATCATCTGATT+TGG	0.325159	6_1:-98404858	None:intergenic
TTGTGTTTATTGTCTCTTAG+AGG	0.354122	6_1:-98403035	None:intergenic
GCGGTGGAATTTGTGAAAAT+TGG	0.355606	6_1:-98402937	None:intergenic
ATATTTAAAGACTTTGTTAG+AGG	0.361817	6_1:-98404956	None:intergenic
AGAAGCTTGGAAAGGGAGAT+TGG	0.367189	6_1:+98403720	Msa0901630:CDS
CTATGCTCTTCTTCTGTCCA+TGG	0.368105	6_1:-98403677	None:intergenic
ACCAACACTATTTAATTGGT+TGG	0.373969	6_1:-98402908	None:intergenic
CTTCATAAATTACATACATA+AGG	0.382920	6_1:-98405153	None:intergenic
ACGTCTCTTCTTCTTGTTCA+AGG	0.393113	6_1:-98403828	None:intergenic
AGGACTTGTAATTCATTAAG+AGG	0.396462	6_1:+98403150	Msa0901630:CDS
AGAGACAATAAACACAAGTT+TGG	0.398819	6_1:+98403041	Msa0901630:five_prime_UTR
GAGCATAGAAAATTCCTTGT+TGG	0.413219	6_1:+98403692	Msa0901630:CDS
CTTGTTGGACTTGAGAAGCT+TGG	0.417301	6_1:+98403707	Msa0901630:CDS
GTTAGAGGATGTAGCCAATC+TGG	0.418818	6_1:-98404941	None:intergenic
GCTTGGAAAGGGAGATTGGA+GGG	0.428206	6_1:+98403724	Msa0901630:CDS
ATTGATGATAGAGCCTCTAT+TGG	0.438397	6_1:+98403321	Msa0901630:CDS
CACAAAAGAACTTATGTGTC+TGG	0.441747	6_1:-98402988	None:intergenic
GAAGAAGAAAAGGAAGAAGT+AGG	0.461242	6_1:-98403288	None:intergenic
TCTATTGGTTATCTTTCAGA+TGG	0.477044	6_1:+98403336	Msa0901630:CDS
GGATAATCTTGAAGAAGAAA+AGG	0.479396	6_1:-98403298	None:intergenic
GTGATATATATGATGATTGA+TGG	0.479509	6_1:-98402966	None:intergenic
GATCTTGAGCTAACTCTGGC+AGG	0.479985	6_1:+98405019	Msa0901630:CDS
TTTCTTGTGTACGAACTATG+AGG	0.489619	6_1:-98403359	None:intergenic
AATAGAGGCTCTATCATCAA+TGG	0.491413	6_1:-98403319	None:intergenic
GAAACATAGGCCATAATTCA+AGG	0.492974	6_1:+98403130	Msa0901630:CDS
GGACTTGAGAAGCTTGGAAA+GGG	0.498462	6_1:+98403713	Msa0901630:CDS
AGCTTGGAAAGGGAGATTGG+AGG	0.502184	6_1:+98403723	Msa0901630:CDS
GGCCCAATAAGAAATGAACT+TGG	0.508375	6_1:-98405079	None:intergenic
ATCTGAAAGATAACCAATAG+AGG	0.510798	6_1:-98403334	None:intergenic
TTTATTAATTAGGAGTTCCA+TGG	0.511389	6_1:+98403660	Msa0901630:intron
GCCAGAGTTAGCTCAAGATC+AGG	0.513405	6_1:-98405016	None:intergenic
TGTGTTTATTGTCTCTTAGA+GGG	0.525698	6_1:-98403034	None:intergenic
GCCCAATAAGAAATGAACTT+GGG	0.527445	6_1:-98405078	None:intergenic
GCATGGCTTGCAACTTGTGT+TGG	0.527834	6_1:-98403779	None:intergenic
AAAGTCTTTAAATATGACAT+TGG	0.528696	6_1:+98404964	Msa0901630:CDS
TCATAGTTCGTACACAAGAA+AGG	0.532269	6_1:+98403361	Msa0901630:CDS
GTAGGAGAAGAAGATGAAGT+AGG	0.532464	6_1:-98403270	None:intergenic
TCCAACCAATTAAATAGTGT+TGG	0.537821	6_1:+98402907	Msa0901630:five_prime_UTR
TTTAAGGTTAAGGTTTGTGT+CGG	0.548532	6_1:+98403074	Msa0901630:five_prime_UTR
GAATATGTTTAGGTTGGTAG+TGG	0.550713	6_1:+98404701	Msa0901630:intron
TGGACATAGTTTATTCAATG+TGG	0.555850	6_1:-98402888	None:intergenic
TGCTCACATTGTGGAAACAT+AGG	0.564462	6_1:+98403117	Msa0901630:CDS
ATCTTGAGCTAACTCTGGCA+GGG	0.569532	6_1:+98405020	Msa0901630:CDS
ACCTGATCTTGAGCTAACTC+TGG	0.582338	6_1:+98405015	Msa0901630:CDS
TGGACTTGAGAAGCTTGGAA+AGG	0.582509	6_1:+98403712	Msa0901630:CDS
GGCAGAAAGTGCTCACATTG+TGG	0.586228	6_1:+98403108	Msa0901630:CDS
CCCAATAAGAAATGAACTTG+GGG	0.590590	6_1:-98405077	None:intergenic
CTTGGAAAGGGAGATTGGAG+GGG	0.594996	6_1:+98403725	Msa0901630:CDS
CAAGCTTCTCAAGTCCAACA+AGG	0.608243	6_1:-98403706	None:intergenic
CATAAATTACATACATAAGG+AGG	0.608861	6_1:-98405150	None:intergenic
TGATGATCATGAAGTTGAGA+AGG	0.617743	6_1:+98404793	Msa0901630:CDS
TGATATATATGATGATTGAT+GGG	0.621044	6_1:-98402965	None:intergenic
GATCATGAAGTTGAGAAGGA+TGG	0.622469	6_1:+98404797	Msa0901630:CDS
TGATTGATGGGTGTGAGCGG+TGG	0.632800	6_1:-98402953	None:intergenic
ACGTTCAAGTCTCTTTGACA+TGG	0.636224	6_1:+98403847	Msa0901630:CDS
AGGGTCCAATTCAAATAACA+TGG	0.651228	6_1:+98405039	Msa0901630:CDS
TGATGATTGATGGGTGTGAG+CGG	0.665275	6_1:-98402956	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTTGTTGTTTTATTAATT+AGG	+	chr6_1:98403650-98403669	Msa0901630:intron	10.0%
!!	AAAAAAAACTTATACAAAAT+GGG	-	chr6_1:98404086-98404105	None:intergenic	10.0%
!!	AAAAAAAAACTTATACAAAA+TGG	-	chr6_1:98404087-98404106	None:intergenic	10.0%
!!!	ATTTTGTTGTTTTATTAATT+AGG	+	chr6_1:98403650-98403669	Msa0901630:intron	10.0%
!!	AAAAAAAACTTATACAAAAT+GGG	-	chr6_1:98404086-98404105	None:intergenic	10.0%
!!	AAAAAAAAACTTATACAAAA+TGG	-	chr6_1:98404087-98404106	None:intergenic	10.0%
!!	ATTATAAAAAGAAGATTCTT+TGG	-	chr6_1:98404257-98404276	None:intergenic	15.0%
!!!	CTTTTTATAATTGTTGAATT+AGG	+	chr6_1:98404266-98404285	Msa0901630:intron	15.0%
!!!	ATGATGTTATTTTAGAATTT+GGG	-	chr6_1:98404297-98404316	None:intergenic	15.0%
!!!	TATGATGTTATTTTAGAATT+TGG	-	chr6_1:98404298-98404317	None:intergenic	15.0%
!!	TAACCTATCAAAAAATTATT+AGG	+	chr6_1:98404316-98404335	Msa0901630:intron	15.0%
!!	ATTATAAAAAGAAGATTCTT+TGG	-	chr6_1:98404257-98404276	None:intergenic	15.0%
!!!	CTTTTTATAATTGTTGAATT+AGG	+	chr6_1:98404266-98404285	Msa0901630:intron	15.0%
!!!	ATGATGTTATTTTAGAATTT+GGG	-	chr6_1:98404297-98404316	None:intergenic	15.0%
!!!	TATGATGTTATTTTAGAATT+TGG	-	chr6_1:98404298-98404317	None:intergenic	15.0%
!!	TAACCTATCAAAAAATTATT+AGG	+	chr6_1:98404316-98404335	Msa0901630:intron	15.0%
!!	TGATATATATGATGATTGAT+GGG	-	chr6_1:98402968-98402987	None:intergenic	20.0%
!!!	TATTCTAGTTTTTAAGGTTA+AGG	+	chr6_1:98403064-98403083	Msa0901630:five_prime_UTR	20.0%
!!!	ATCAAATTTTATCAAGACAT+CGG	+	chr6_1:98403431-98403450	Msa0901630:intron	20.0%
!!	CTATGATGTATTTATTATGA+AGG	+	chr6_1:98403512-98403531	Msa0901630:intron	20.0%
!!	TATGCATTTCATTGAATTTA+AGG	-	chr6_1:98403966-98403985	None:intergenic	20.0%
!!	TTTGAATTTACTCATTTAGA+CGG	-	chr6_1:98404206-98404225	None:intergenic	20.0%
!!!	TGACCTAATAATTTTTTGAT+AGG	-	chr6_1:98404322-98404341	None:intergenic	20.0%
!!	TGTTTGTATATCAAAAATCA+AGG	-	chr6_1:98404487-98404506	None:intergenic	20.0%
!!	AAATAAAAAACGTCAAATGT+CGG	+	chr6_1:98404522-98404541	Msa0901630:intron	20.0%
!!	TAAAATGCAAATATCCAAAT+TGG	-	chr6_1:98404651-98404670	None:intergenic	20.0%
!!	TGATATTGTTGAATATGTTT+AGG	+	chr6_1:98404691-98404710	Msa0901630:intron	20.0%
!!	ATATTTAAAGACTTTGTTAG+AGG	-	chr6_1:98404959-98404978	None:intergenic	20.0%
!!	AAAGTCTTTAAATATGACAT+TGG	+	chr6_1:98404964-98404983	Msa0901630:CDS	20.0%
!!	CTTCATAAATTACATACATA+AGG	-	chr6_1:98405156-98405175	None:intergenic	20.0%
!!	TGATATATATGATGATTGAT+GGG	-	chr6_1:98402968-98402987	None:intergenic	20.0%
!!!	TATTCTAGTTTTTAAGGTTA+AGG	+	chr6_1:98403064-98403083	Msa0901630:five_prime_UTR	20.0%
!!!	ATCAAATTTTATCAAGACAT+CGG	+	chr6_1:98403431-98403450	Msa0901630:intron	20.0%
!!	CTATGATGTATTTATTATGA+AGG	+	chr6_1:98403512-98403531	Msa0901630:intron	20.0%
!!	TATGCATTTCATTGAATTTA+AGG	-	chr6_1:98403966-98403985	None:intergenic	20.0%
!!	TTTGAATTTACTCATTTAGA+CGG	-	chr6_1:98404206-98404225	None:intergenic	20.0%
!!!	TGACCTAATAATTTTTTGAT+AGG	-	chr6_1:98404322-98404341	None:intergenic	20.0%
!!	TGTTTGTATATCAAAAATCA+AGG	-	chr6_1:98404487-98404506	None:intergenic	20.0%
!!	AAATAAAAAACGTCAAATGT+CGG	+	chr6_1:98404522-98404541	Msa0901630:intron	20.0%
!!	TAAAATGCAAATATCCAAAT+TGG	-	chr6_1:98404651-98404670	None:intergenic	20.0%
!!	TGATATTGTTGAATATGTTT+AGG	+	chr6_1:98404691-98404710	Msa0901630:intron	20.0%
!!	ATATTTAAAGACTTTGTTAG+AGG	-	chr6_1:98404959-98404978	None:intergenic	20.0%
!!	AAAGTCTTTAAATATGACAT+TGG	+	chr6_1:98404964-98404983	Msa0901630:CDS	20.0%
!!	CTTCATAAATTACATACATA+AGG	-	chr6_1:98405156-98405175	None:intergenic	20.0%
!	GTGATATATATGATGATTGA+TGG	-	chr6_1:98402969-98402988	None:intergenic	25.0%
!!!	GTTTGGTATTCTAGTTTTTA+AGG	+	chr6_1:98403058-98403077	Msa0901630:five_prime_UTR	25.0%
!	AATTACAAGTCCTTGAATTA+TGG	-	chr6_1:98403143-98403162	None:intergenic	25.0%
!	TTTATTAATTAGGAGTTCCA+TGG	+	chr6_1:98403660-98403679	Msa0901630:intron	25.0%
!!	GAATAAAATACTTTTGAGCA+TGG	-	chr6_1:98403799-98403818	None:intergenic	25.0%
!	TCTATAAAAGAGTTCATATG+TGG	+	chr6_1:98404035-98404054	Msa0901630:intron	25.0%
!	CTATAAAAGAGTTCATATGT+GGG	+	chr6_1:98404036-98404055	Msa0901630:intron	25.0%
!	AAAAACTTATACAAAATGGG+CGG	-	chr6_1:98404083-98404102	None:intergenic	25.0%
!	ATGTTCAATCTTAGACATAA+AGG	+	chr6_1:98404427-98404446	Msa0901630:intron	25.0%
!	ATTGTTGAATATGTTTAGGT+TGG	+	chr6_1:98404695-98404714	Msa0901630:intron	25.0%
!	CATATCATAATCATCTGATT+TGG	-	chr6_1:98404861-98404880	None:intergenic	25.0%
!!	TTGTTCCATGTTATTTGAAT+TGG	-	chr6_1:98405047-98405066	None:intergenic	25.0%
!	CATAAATTACATACATAAGG+AGG	-	chr6_1:98405153-98405172	None:intergenic	25.0%
!	GTGATATATATGATGATTGA+TGG	-	chr6_1:98402969-98402988	None:intergenic	25.0%
!!!	GTTTGGTATTCTAGTTTTTA+AGG	+	chr6_1:98403058-98403077	Msa0901630:five_prime_UTR	25.0%
!	AATTACAAGTCCTTGAATTA+TGG	-	chr6_1:98403143-98403162	None:intergenic	25.0%
!	TTTATTAATTAGGAGTTCCA+TGG	+	chr6_1:98403660-98403679	Msa0901630:intron	25.0%
!!	GAATAAAATACTTTTGAGCA+TGG	-	chr6_1:98403799-98403818	None:intergenic	25.0%
!	TCTATAAAAGAGTTCATATG+TGG	+	chr6_1:98404035-98404054	Msa0901630:intron	25.0%
!	CTATAAAAGAGTTCATATGT+GGG	+	chr6_1:98404036-98404055	Msa0901630:intron	25.0%
!	AAAAACTTATACAAAATGGG+CGG	-	chr6_1:98404083-98404102	None:intergenic	25.0%
!	ATGTTCAATCTTAGACATAA+AGG	+	chr6_1:98404427-98404446	Msa0901630:intron	25.0%
!	ATTGTTGAATATGTTTAGGT+TGG	+	chr6_1:98404695-98404714	Msa0901630:intron	25.0%
!	CATATCATAATCATCTGATT+TGG	-	chr6_1:98404861-98404880	None:intergenic	25.0%
!!	TTGTTCCATGTTATTTGAAT+TGG	-	chr6_1:98405047-98405066	None:intergenic	25.0%
!	CATAAATTACATACATAAGG+AGG	-	chr6_1:98405153-98405172	None:intergenic	25.0%
	TGGACATAGTTTATTCAATG+TGG	-	chr6_1:98402891-98402910	None:intergenic	30.0%
	TCCAACCAATTAAATAGTGT+TGG	+	chr6_1:98402907-98402926	Msa0901630:five_prime_UTR	30.0%
	ACCAACACTATTTAATTGGT+TGG	-	chr6_1:98402911-98402930	None:intergenic	30.0%
!	ACACATAAGTTCTTTTGTGT+TGG	+	chr6_1:98402992-98403011	Msa0901630:five_prime_UTR	30.0%
	TGTGTTTATTGTCTCTTAGA+GGG	-	chr6_1:98403037-98403056	None:intergenic	30.0%
	TTGTGTTTATTGTCTCTTAG+AGG	-	chr6_1:98403038-98403057	None:intergenic	30.0%
	AGAGACAATAAACACAAGTT+TGG	+	chr6_1:98403041-98403060	Msa0901630:five_prime_UTR	30.0%
!	TTTAAGGTTAAGGTTTGTGT+CGG	+	chr6_1:98403074-98403093	Msa0901630:five_prime_UTR	30.0%
!!	TTTGTGTCGGTTCAAAAAAT+GGG	+	chr6_1:98403087-98403106	Msa0901630:exon	30.0%
	AGGACTTGTAATTCATTAAG+AGG	+	chr6_1:98403150-98403169	Msa0901630:CDS	30.0%
!	TTTGTTGGAGTTAGACTTTT+TGG	+	chr6_1:98403183-98403202	Msa0901630:CDS	30.0%
!!	CATGCTAAAACTCTTTTTCA+TGG	-	chr6_1:98403241-98403260	None:intergenic	30.0%
!!	CATGAAAAAGAGTTTTAGCA+TGG	+	chr6_1:98403239-98403258	Msa0901630:CDS	30.0%
	GGATAATCTTGAAGAAGAAA+AGG	-	chr6_1:98403301-98403320	None:intergenic	30.0%
	ATCTGAAAGATAACCAATAG+AGG	-	chr6_1:98403337-98403356	None:intergenic	30.0%
!	TCTATTGGTTATCTTTCAGA+TGG	+	chr6_1:98403336-98403355	Msa0901630:CDS	30.0%
!!!	TCATCCATTTTGAAGTATCT+AGG	+	chr6_1:98403480-98403499	Msa0901630:intron	30.0%
!	TCATTGAATTTAAGGTCATG+AGG	-	chr6_1:98403958-98403977	None:intergenic	30.0%
	AAAACTTATACAAAATGGGC+GGG	-	chr6_1:98404082-98404101	None:intergenic	30.0%
!!	GTGCTTTTTAAGAAATCAGA+GGG	-	chr6_1:98404119-98404138	None:intergenic	30.0%
!!	TGTGCTTTTTAAGAAATCAG+AGG	-	chr6_1:98404120-98404139	None:intergenic	30.0%
!!	TGAGTGGTTTTTAAGAATCA+TGG	+	chr6_1:98404228-98404247	Msa0901630:intron	30.0%
	TTCTTCTCAAAAGACCAATT+TGG	+	chr6_1:98404634-98404653	Msa0901630:intron	30.0%
!!!	TTGCTTTTTGAGCTGTTATT+TGG	-	chr6_1:98404749-98404768	None:intergenic	30.0%
	GCATCTACATTTGAAGAATT+TGG	-	chr6_1:98404995-98405014	None:intergenic	30.0%
	GCTAATTAAGTCACACTAAT+TGG	-	chr6_1:98405103-98405122	None:intergenic	30.0%
	TGGACATAGTTTATTCAATG+TGG	-	chr6_1:98402891-98402910	None:intergenic	30.0%
	TCCAACCAATTAAATAGTGT+TGG	+	chr6_1:98402907-98402926	Msa0901630:five_prime_UTR	30.0%
	ACCAACACTATTTAATTGGT+TGG	-	chr6_1:98402911-98402930	None:intergenic	30.0%
!	ACACATAAGTTCTTTTGTGT+TGG	+	chr6_1:98402992-98403011	Msa0901630:five_prime_UTR	30.0%
	TGTGTTTATTGTCTCTTAGA+GGG	-	chr6_1:98403037-98403056	None:intergenic	30.0%
	TTGTGTTTATTGTCTCTTAG+AGG	-	chr6_1:98403038-98403057	None:intergenic	30.0%
	AGAGACAATAAACACAAGTT+TGG	+	chr6_1:98403041-98403060	Msa0901630:five_prime_UTR	30.0%
!	TTTAAGGTTAAGGTTTGTGT+CGG	+	chr6_1:98403074-98403093	Msa0901630:five_prime_UTR	30.0%
!!	TTTGTGTCGGTTCAAAAAAT+GGG	+	chr6_1:98403087-98403106	Msa0901630:exon	30.0%
	AGGACTTGTAATTCATTAAG+AGG	+	chr6_1:98403150-98403169	Msa0901630:CDS	30.0%
!	TTTGTTGGAGTTAGACTTTT+TGG	+	chr6_1:98403183-98403202	Msa0901630:CDS	30.0%
!!	CATGCTAAAACTCTTTTTCA+TGG	-	chr6_1:98403241-98403260	None:intergenic	30.0%
!!	CATGAAAAAGAGTTTTAGCA+TGG	+	chr6_1:98403239-98403258	Msa0901630:CDS	30.0%
	GGATAATCTTGAAGAAGAAA+AGG	-	chr6_1:98403301-98403320	None:intergenic	30.0%
	ATCTGAAAGATAACCAATAG+AGG	-	chr6_1:98403337-98403356	None:intergenic	30.0%
!	TCTATTGGTTATCTTTCAGA+TGG	+	chr6_1:98403336-98403355	Msa0901630:CDS	30.0%
!!!	TCATCCATTTTGAAGTATCT+AGG	+	chr6_1:98403480-98403499	Msa0901630:intron	30.0%
!	TCATTGAATTTAAGGTCATG+AGG	-	chr6_1:98403958-98403977	None:intergenic	30.0%
	AAAACTTATACAAAATGGGC+GGG	-	chr6_1:98404082-98404101	None:intergenic	30.0%
!!	GTGCTTTTTAAGAAATCAGA+GGG	-	chr6_1:98404119-98404138	None:intergenic	30.0%
!!	TGTGCTTTTTAAGAAATCAG+AGG	-	chr6_1:98404120-98404139	None:intergenic	30.0%
!!	TGAGTGGTTTTTAAGAATCA+TGG	+	chr6_1:98404228-98404247	Msa0901630:intron	30.0%
	TTCTTCTCAAAAGACCAATT+TGG	+	chr6_1:98404634-98404653	Msa0901630:intron	30.0%
!!!	TTGCTTTTTGAGCTGTTATT+TGG	-	chr6_1:98404749-98404768	None:intergenic	30.0%
	GCATCTACATTTGAAGAATT+TGG	-	chr6_1:98404995-98405014	None:intergenic	30.0%
	GCTAATTAAGTCACACTAAT+TGG	-	chr6_1:98405103-98405122	None:intergenic	30.0%
	GCACACCAACACTATTTAAT+TGG	-	chr6_1:98402915-98402934	None:intergenic	35.0%
	CACAAAAGAACTTATGTGTC+TGG	-	chr6_1:98402991-98403010	None:intergenic	35.0%
!!	GTTTGTGTCGGTTCAAAAAA+TGG	+	chr6_1:98403086-98403105	Msa0901630:exon	35.0%
	GAAACATAGGCCATAATTCA+AGG	+	chr6_1:98403130-98403149	Msa0901630:CDS	35.0%
!!!	AGAGGAAGTAGTAGTTTTGT+TGG	+	chr6_1:98403168-98403187	Msa0901630:CDS	35.0%
	GAAGAAGAAAAGGAAGAAGT+AGG	-	chr6_1:98403291-98403310	None:intergenic	35.0%
	AATAGAGGCTCTATCATCAA+TGG	-	chr6_1:98403322-98403341	None:intergenic	35.0%
!	ATTGATGATAGAGCCTCTAT+TGG	+	chr6_1:98403321-98403340	Msa0901630:CDS	35.0%
	TTTCTTGTGTACGAACTATG+AGG	-	chr6_1:98403362-98403381	None:intergenic	35.0%
	TCATAGTTCGTACACAAGAA+AGG	+	chr6_1:98403361-98403380	Msa0901630:CDS	35.0%
	CGTACACAAGAAAGGAAAAA+AGG	+	chr6_1:98403369-98403388	Msa0901630:CDS	35.0%
	GAAGCCTAGATACTTCAAAA+TGG	-	chr6_1:98403487-98403506	None:intergenic	35.0%
	GAGCATAGAAAATTCCTTGT+TGG	+	chr6_1:98403692-98403711	Msa0901630:CDS	35.0%
	ACGCGTTTGGATGTATAATT+CGG	+	chr6_1:98404164-98404183	Msa0901630:intron	35.0%
	TGAGTAAATTCAAACGTGAG+TGG	+	chr6_1:98404212-98404231	Msa0901630:intron	35.0%
!!	GTGGTTTTTAAGAATCATGG+TGG	+	chr6_1:98404231-98404250	Msa0901630:intron	35.0%
	CAGTTAAAGTAGTCTCGATA+AGG	-	chr6_1:98404558-98404577	None:intergenic	35.0%
!!	GAATATGTTTAGGTTGGTAG+TGG	+	chr6_1:98404701-98404720	Msa0901630:intron	35.0%
	TGATGATCATGAAGTTGAGA+AGG	+	chr6_1:98404793-98404812	Msa0901630:CDS	35.0%
	AACAAAAAGATGTGCCAGAT+TGG	+	chr6_1:98404927-98404946	Msa0901630:CDS	35.0%
	AGGGTCCAATTCAAATAACA+TGG	+	chr6_1:98405039-98405058	Msa0901630:CDS	35.0%
	TCCCCAAGTTCATTTCTTAT+TGG	+	chr6_1:98405076-98405095	Msa0901630:CDS	35.0%
	CCCAATAAGAAATGAACTTG+GGG	-	chr6_1:98405080-98405099	None:intergenic	35.0%
	CCCCAAGTTCATTTCTTATT+GGG	+	chr6_1:98405077-98405096	Msa0901630:CDS	35.0%
	GCCCAATAAGAAATGAACTT+GGG	-	chr6_1:98405081-98405100	None:intergenic	35.0%
	GCACACCAACACTATTTAAT+TGG	-	chr6_1:98402915-98402934	None:intergenic	35.0%
	CACAAAAGAACTTATGTGTC+TGG	-	chr6_1:98402991-98403010	None:intergenic	35.0%
!!	GTTTGTGTCGGTTCAAAAAA+TGG	+	chr6_1:98403086-98403105	Msa0901630:exon	35.0%
	GAAACATAGGCCATAATTCA+AGG	+	chr6_1:98403130-98403149	Msa0901630:CDS	35.0%
!!!	AGAGGAAGTAGTAGTTTTGT+TGG	+	chr6_1:98403168-98403187	Msa0901630:CDS	35.0%
	GAAGAAGAAAAGGAAGAAGT+AGG	-	chr6_1:98403291-98403310	None:intergenic	35.0%
	AATAGAGGCTCTATCATCAA+TGG	-	chr6_1:98403322-98403341	None:intergenic	35.0%
!	ATTGATGATAGAGCCTCTAT+TGG	+	chr6_1:98403321-98403340	Msa0901630:CDS	35.0%
	TTTCTTGTGTACGAACTATG+AGG	-	chr6_1:98403362-98403381	None:intergenic	35.0%
	TCATAGTTCGTACACAAGAA+AGG	+	chr6_1:98403361-98403380	Msa0901630:CDS	35.0%
	CGTACACAAGAAAGGAAAAA+AGG	+	chr6_1:98403369-98403388	Msa0901630:CDS	35.0%
	GAAGCCTAGATACTTCAAAA+TGG	-	chr6_1:98403487-98403506	None:intergenic	35.0%
	GAGCATAGAAAATTCCTTGT+TGG	+	chr6_1:98403692-98403711	Msa0901630:CDS	35.0%
	ACGCGTTTGGATGTATAATT+CGG	+	chr6_1:98404164-98404183	Msa0901630:intron	35.0%
	TGAGTAAATTCAAACGTGAG+TGG	+	chr6_1:98404212-98404231	Msa0901630:intron	35.0%
!!	GTGGTTTTTAAGAATCATGG+TGG	+	chr6_1:98404231-98404250	Msa0901630:intron	35.0%
	CAGTTAAAGTAGTCTCGATA+AGG	-	chr6_1:98404558-98404577	None:intergenic	35.0%
!!	GAATATGTTTAGGTTGGTAG+TGG	+	chr6_1:98404701-98404720	Msa0901630:intron	35.0%
	TGATGATCATGAAGTTGAGA+AGG	+	chr6_1:98404793-98404812	Msa0901630:CDS	35.0%
	AACAAAAAGATGTGCCAGAT+TGG	+	chr6_1:98404927-98404946	Msa0901630:CDS	35.0%
	AGGGTCCAATTCAAATAACA+TGG	+	chr6_1:98405039-98405058	Msa0901630:CDS	35.0%
	TCCCCAAGTTCATTTCTTAT+TGG	+	chr6_1:98405076-98405095	Msa0901630:CDS	35.0%
	CCCAATAAGAAATGAACTTG+GGG	-	chr6_1:98405080-98405099	None:intergenic	35.0%
	CCCCAAGTTCATTTCTTATT+GGG	+	chr6_1:98405077-98405096	Msa0901630:CDS	35.0%
	GCCCAATAAGAAATGAACTT+GGG	-	chr6_1:98405081-98405100	None:intergenic	35.0%
	GCGGTGGAATTTGTGAAAAT+TGG	-	chr6_1:98402940-98402959	None:intergenic	40.0%
	TGCTCACATTGTGGAAACAT+AGG	+	chr6_1:98403117-98403136	Msa0901630:CDS	40.0%
	GTAGGAGAAGAAGATGAAGT+AGG	-	chr6_1:98403273-98403292	None:intergenic	40.0%
!	TTTTATCAAGACATCGGTGC+AGG	+	chr6_1:98403437-98403456	Msa0901630:intron	40.0%
	ACGTCTCTTCTTCTTGTTCA+AGG	-	chr6_1:98403831-98403850	None:intergenic	40.0%
	ACGTTCAAGTCTCTTTGACA+TGG	+	chr6_1:98403847-98403866	Msa0901630:CDS	40.0%
!	AAAAGCACACCACTTCGAAT+TGG	+	chr6_1:98404131-98404150	Msa0901630:intron	40.0%
	AACAGCTCAAAAAGCAAGTC+AGG	+	chr6_1:98404752-98404771	Msa0901630:CDS	40.0%
	GATCATGAAGTTGAGAAGGA+TGG	+	chr6_1:98404797-98404816	Msa0901630:CDS	40.0%
	GGCCCAATAAGAAATGAACT+TGG	-	chr6_1:98405082-98405101	None:intergenic	40.0%
	GCGGTGGAATTTGTGAAAAT+TGG	-	chr6_1:98402940-98402959	None:intergenic	40.0%
	TGCTCACATTGTGGAAACAT+AGG	+	chr6_1:98403117-98403136	Msa0901630:CDS	40.0%
	GTAGGAGAAGAAGATGAAGT+AGG	-	chr6_1:98403273-98403292	None:intergenic	40.0%
!	TTTTATCAAGACATCGGTGC+AGG	+	chr6_1:98403437-98403456	Msa0901630:intron	40.0%
	ACGTCTCTTCTTCTTGTTCA+AGG	-	chr6_1:98403831-98403850	None:intergenic	40.0%
	ACGTTCAAGTCTCTTTGACA+TGG	+	chr6_1:98403847-98403866	Msa0901630:CDS	40.0%
!	AAAAGCACACCACTTCGAAT+TGG	+	chr6_1:98404131-98404150	Msa0901630:intron	40.0%
	AACAGCTCAAAAAGCAAGTC+AGG	+	chr6_1:98404752-98404771	Msa0901630:CDS	40.0%
	GATCATGAAGTTGAGAAGGA+TGG	+	chr6_1:98404797-98404816	Msa0901630:CDS	40.0%
	GGCCCAATAAGAAATGAACT+TGG	-	chr6_1:98405082-98405101	None:intergenic	40.0%
!	TGATGATTGATGGGTGTGAG+CGG	-	chr6_1:98402959-98402978	None:intergenic	45.0%
	CTATGCTCTTCTTCTGTCCA+TGG	-	chr6_1:98403680-98403699	None:intergenic	45.0%
	CAAGCTTCTCAAGTCCAACA+AGG	-	chr6_1:98403709-98403728	None:intergenic	45.0%
	CTTGTTGGACTTGAGAAGCT+TGG	+	chr6_1:98403707-98403726	Msa0901630:CDS	45.0%
	TGGACTTGAGAAGCTTGGAA+AGG	+	chr6_1:98403712-98403731	Msa0901630:CDS	45.0%
	GGACTTGAGAAGCTTGGAAA+GGG	+	chr6_1:98403713-98403732	Msa0901630:CDS	45.0%
	AGAAGCTTGGAAAGGGAGAT+TGG	+	chr6_1:98403720-98403739	Msa0901630:CDS	45.0%
	CACACCACTTCGAATTGGAA+AGG	+	chr6_1:98404136-98404155	Msa0901630:intron	45.0%
	GTTAGAGGATGTAGCCAATC+TGG	-	chr6_1:98404944-98404963	None:intergenic	45.0%
	ACCTGATCTTGAGCTAACTC+TGG	+	chr6_1:98405015-98405034	Msa0901630:CDS	45.0%
	ATCTTGAGCTAACTCTGGCA+GGG	+	chr6_1:98405020-98405039	Msa0901630:CDS	45.0%
!	TGATGATTGATGGGTGTGAG+CGG	-	chr6_1:98402959-98402978	None:intergenic	45.0%
	CTATGCTCTTCTTCTGTCCA+TGG	-	chr6_1:98403680-98403699	None:intergenic	45.0%
	CAAGCTTCTCAAGTCCAACA+AGG	-	chr6_1:98403709-98403728	None:intergenic	45.0%
	CTTGTTGGACTTGAGAAGCT+TGG	+	chr6_1:98403707-98403726	Msa0901630:CDS	45.0%
	TGGACTTGAGAAGCTTGGAA+AGG	+	chr6_1:98403712-98403731	Msa0901630:CDS	45.0%
	GGACTTGAGAAGCTTGGAAA+GGG	+	chr6_1:98403713-98403732	Msa0901630:CDS	45.0%
	AGAAGCTTGGAAAGGGAGAT+TGG	+	chr6_1:98403720-98403739	Msa0901630:CDS	45.0%
	CACACCACTTCGAATTGGAA+AGG	+	chr6_1:98404136-98404155	Msa0901630:intron	45.0%
	GTTAGAGGATGTAGCCAATC+TGG	-	chr6_1:98404944-98404963	None:intergenic	45.0%
	ACCTGATCTTGAGCTAACTC+TGG	+	chr6_1:98405015-98405034	Msa0901630:CDS	45.0%
	ATCTTGAGCTAACTCTGGCA+GGG	+	chr6_1:98405020-98405039	Msa0901630:CDS	45.0%
!!!	TTTTATATATAAATTAAGAA+AGG	-	chr6_1:98403913-98403932	None:intergenic	5.0%
!!!	TTTTATATATAAATTAAGAA+AGG	-	chr6_1:98403913-98403932	None:intergenic	5.0%
!!	GGCAGAAAGTGCTCACATTG+TGG	+	chr6_1:98403108-98403127	Msa0901630:CDS	50.0%
	AGCTTGGAAAGGGAGATTGG+AGG	+	chr6_1:98403723-98403742	Msa0901630:CDS	50.0%
	GCTTGGAAAGGGAGATTGGA+GGG	+	chr6_1:98403724-98403743	Msa0901630:CDS	50.0%
	CTTGGAAAGGGAGATTGGAG+GGG	+	chr6_1:98403725-98403744	Msa0901630:CDS	50.0%
!	GCATGGCTTGCAACTTGTGT+TGG	-	chr6_1:98403782-98403801	None:intergenic	50.0%
	CGTGCCTTTCCAATTCGAAG+TGG	-	chr6_1:98404143-98404162	None:intergenic	50.0%
	GCCAGAGTTAGCTCAAGATC+AGG	-	chr6_1:98405019-98405038	None:intergenic	50.0%
	GATCTTGAGCTAACTCTGGC+AGG	+	chr6_1:98405019-98405038	Msa0901630:CDS	50.0%
!!	GGCAGAAAGTGCTCACATTG+TGG	+	chr6_1:98403108-98403127	Msa0901630:CDS	50.0%
	AGCTTGGAAAGGGAGATTGG+AGG	+	chr6_1:98403723-98403742	Msa0901630:CDS	50.0%
	GCTTGGAAAGGGAGATTGGA+GGG	+	chr6_1:98403724-98403743	Msa0901630:CDS	50.0%
	CTTGGAAAGGGAGATTGGAG+GGG	+	chr6_1:98403725-98403744	Msa0901630:CDS	50.0%
!	GCATGGCTTGCAACTTGTGT+TGG	-	chr6_1:98403782-98403801	None:intergenic	50.0%
	CGTGCCTTTCCAATTCGAAG+TGG	-	chr6_1:98404143-98404162	None:intergenic	50.0%
	GCCAGAGTTAGCTCAAGATC+AGG	-	chr6_1:98405019-98405038	None:intergenic	50.0%
	GATCTTGAGCTAACTCTGGC+AGG	+	chr6_1:98405019-98405038	Msa0901630:CDS	50.0%
!	TGATTGATGGGTGTGAGCGG+TGG	-	chr6_1:98402956-98402975	None:intergenic	55.0%
	ACATCGGTGCAGGATACGCA+GGG	+	chr6_1:98403447-98403466	Msa0901630:intron	55.0%
	GTGCAGGATACGCAGGGATA+CGG	+	chr6_1:98403453-98403472	Msa0901630:intron	55.0%
!	TGGAAAGGCACGAACGCGTT+TGG	+	chr6_1:98404151-98404170	Msa0901630:intron	55.0%
!	TGATTGATGGGTGTGAGCGG+TGG	-	chr6_1:98402956-98402975	None:intergenic	55.0%
	ACATCGGTGCAGGATACGCA+GGG	+	chr6_1:98403447-98403466	Msa0901630:intron	55.0%
	GTGCAGGATACGCAGGGATA+CGG	+	chr6_1:98403453-98403472	Msa0901630:intron	55.0%
!	TGGAAAGGCACGAACGCGTT+TGG	+	chr6_1:98404151-98404170	Msa0901630:intron	55.0%
	GACATCGGTGCAGGATACGC+AGG	+	chr6_1:98403446-98403465	Msa0901630:intron	60.0%
	GACATCGGTGCAGGATACGC+AGG	+	chr6_1:98403446-98403465	Msa0901630:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr6_1	gene	98402864	98405217	98402864	ID=Msa0901630;Name=Msa0901630
chr6_1	mRNA	98402864	98405217	98402864	ID=Msa0901630-mRNA-1;Parent=Msa0901630;Name=Msa0901630-mRNA-1;_AED=0.20;_eAED=0.20;_QI=241\|1\|1\|1\|1\|1\|3\|100\|295
chr6_1	exon	98402864	98403390	98402864	ID=Msa0901630-mRNA-1:exon:17353;Parent=Msa0901630-mRNA-1
chr6_1	exon	98403672	98403868	98403672	ID=Msa0901630-mRNA-1:exon:17354;Parent=Msa0901630-mRNA-1
chr6_1	exon	98404713	98405217	98404713	ID=Msa0901630-mRNA-1:exon:17355;Parent=Msa0901630-mRNA-1
chr6_1	five_prime_UTR	98402864	98403104	98402864	ID=Msa0901630-mRNA-1:five_prime_utr;Parent=Msa0901630-mRNA-1
chr6_1	CDS	98403105	98403390	98403105	ID=Msa0901630-mRNA-1:cds;Parent=Msa0901630-mRNA-1
chr6_1	CDS	98403672	98403868	98403672	ID=Msa0901630-mRNA-1:cds;Parent=Msa0901630-mRNA-1
chr6_1	CDS	98404713	98405117	98404713	ID=Msa0901630-mRNA-1:cds;Parent=Msa0901630-mRNA-1
chr6_1	three_prime_UTR	98405118	98405217	98405118	ID=Msa0901630-mRNA-1:three_prime_utr;Parent=Msa0901630-mRNA-1

Gene Sequence

>Msa0901630

ATGGGCAGAAAGTGCTCACATTGTGGAAACATAGGCCATAATTCAAGGACTTGTAATTCATTAAGAGGAAGTAGTAGTTTTGTTGGAGTTAGACTTTTTGGTGTTCAACTTGATTTATCTTCTTCTTGTGTTTCCATGAAAAAGAGTTTTAGCATGGATTCTTTTCCTACTTCATCTTCTTCTCCTACTTCTTCCTTTTCTTCTTCAAGATTATCCATTGATGATAGAGCCTCTATTGGTTATCTTTCAGATGGCCTCATAGTTCGTACACAAGAAAGGAAAAAAGGAGTTCCATGGACAGAAGAAGAGCATAGAAAATTCCTTGTTGGACTTGAGAAGCTTGGAAAGGGAGATTGGAGGGGTATCTCTAGAAACTATGTGACTACAAGAACACCAACACAAGTTGCAAGCCATGCTCAAAAGTATTTTATTCGACTTGCTACCTTGAACAAGAAGAAGAGACGTTCAAGTCTCTTTGACATGGTTGGTAGTGGCAAGACAAACAAAGCAGTTGATCCAAATAACAGCTCAAAAAGCAAGTCAGGTGATTCAGTTTGTAGACATGATGATCATGAAGTTGAGAAGGATGGAACTTTGTCACTACTAATAAACTCACTTCAACAACAAACCAAATCAGATGATTATGATATGCAAAAAATTGAAGATGTTGAAGTTGAAGATGATTCTGAAGAAGCAAAACAAAAAGATGTGCCAGATTGGCTACATCCTCTAACAAAGTCTTTAAATATGACATTGGTTATACCAAATTCTTCAAATGTAGATGCACCTGATCTTGAGCTAACTCTGGCAGGGTCCAATTCAAATAACATGGAACAAGATAAAACATCCCCAAGTTCATTTCTTATTGGGCCAATTAGTGTGACTTAA

Protein sequence

>Msa0901630

MGRKCSHCGNIGHNSRTCNSLRGSSSFVGVRLFGVQLDLSSSCVSMKKSFSMDSFPTSSSSPTSSFSSSRLSIDDRASIGYLSDGLIVRTQERKKGVPWTEEEHRKFLVGLEKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRLATLNKKKRRSSLFDMVGSGKTNKAVDPNNSSKSKSGDSVCRHDDHEVEKDGTLSLLINSLQQQTKSDDYDMQKIEDVEVEDDSEEAKQKDVPDWLHPLTKSLNMTLVIPNSSNVDAPDLELTLAGSNSNNMEQDKTSPSSFLIGPISVT*