Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1189990 | XP_013445459.1 | 92.823 | 418 | 8 | 2 | 1 | 396 | 1 | 418 | 0.0 | 783 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1189990 | sp|Q39199|RECAC_ARATH | 74.112 | 394 | 73 | 4 | 6 | 370 | 15 | 408 | 0.0 | 574 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0020630 | Msa1189990 | 0.809031 | 2.313336e-50 | -8.615850e-47 |
Msa0030000 | Msa1189990 | 0.822228 | 2.650377e-53 | -8.615850e-47 |
Msa0038350 | Msa1189990 | -0.805783 | 1.129829e-49 | -8.615850e-47 |
Msa0055280 | Msa1189990 | 0.803135 | 4.026816e-49 | -8.615850e-47 |
Msa0068410 | Msa1189990 | 0.805037 | 1.619282e-49 | -8.615850e-47 |
Msa0075310 | Msa1189990 | 0.804881 | 1.746276e-49 | -8.615850e-47 |
Msa0091480 | Msa1189990 | 0.810633 | 1.046035e-50 | -8.615850e-47 |
Msa0091770 | Msa1189990 | 0.809175 | 2.154272e-50 | -8.615850e-47 |
Msa0114250 | Msa1189990 | 0.805378 | 1.374408e-49 | -8.615850e-47 |
Msa0620640 | Msa1189990 | 0.819083 | 1.399330e-52 | -8.615850e-47 |
Msa0624730 | Msa1189990 | 0.841086 | 5.879501e-58 | -8.615850e-47 |
Msa0626230 | Msa1189990 | 0.805552 | 1.263388e-49 | -8.615850e-47 |
Msa0657670 | Msa1189990 | 0.809408 | 1.920675e-50 | -8.615850e-47 |
Msa0674220 | Msa1189990 | 0.845698 | 3.453000e-59 | -8.615850e-47 |
Msa0674300 | Msa1189990 | 0.817038 | 4.056715e-52 | -8.615850e-47 |
Msa0707780 | Msa1189990 | 0.814680 | 1.361591e-51 | -8.615850e-47 |
Msa0714600 | Msa1189990 | 0.822030 | 2.945721e-53 | -8.615850e-47 |
Msa0792510 | Msa1189990 | 0.814886 | 1.225814e-51 | -8.615850e-47 |
Msa0828570 | Msa1189990 | 0.814638 | 1.391541e-51 | -8.615850e-47 |
Msa0837990 | Msa1189990 | 0.805703 | 1.174602e-49 | -8.615850e-47 |
Msa0159750 | Msa1189990 | 0.810033 | 1.409577e-50 | -8.615850e-47 |
Msa0168100 | Msa1189990 | 0.817021 | 4.092557e-52 | -8.615850e-47 |
Msa0181410 | Msa1189990 | 0.800317 | 1.525389e-48 | -8.615850e-47 |
Msa0182930 | Msa1189990 | 0.800089 | 1.697320e-48 | -8.615850e-47 |
Msa0207000 | Msa1189990 | 0.810541 | 1.095220e-50 | -8.615850e-47 |
Msa0404690 | Msa1189990 | 0.801708 | 7.927960e-49 | -8.615850e-47 |
Msa0413740 | Msa1189990 | 0.801707 | 7.928700e-49 | -8.615850e-47 |
Msa0462590 | Msa1189990 | 0.813776 | 2.157249e-51 | -8.615850e-47 |
Msa1036390 | Msa1189990 | 0.808742 | 2.667295e-50 | -8.615850e-47 |
Msa1072350 | Msa1189990 | 0.825420 | 4.734257e-54 | -8.615850e-47 |
Msa1073840 | Msa1189990 | 0.804237 | 2.378655e-49 | -8.615850e-47 |
Msa1076680 | Msa1189990 | 0.810133 | 1.341494e-50 | -8.615850e-47 |
Msa0240780 | Msa1189990 | 0.802128 | 6.497295e-49 | -8.615850e-47 |
Msa0252180 | Msa1189990 | 0.805043 | 1.614704e-49 | -8.615850e-47 |
Msa0264940 | Msa1189990 | -0.817118 | 3.892242e-52 | -8.615850e-47 |
Msa0298940 | Msa1189990 | 0.821504 | 3.899015e-53 | -8.615850e-47 |
Msa0298970 | Msa1189990 | 0.817483 | 3.222112e-52 | -8.615850e-47 |
Msa0302990 | Msa1189990 | -0.819298 | 1.249668e-52 | -8.615850e-47 |
Msa1111630 | Msa1189990 | 0.824422 | 8.141868e-54 | -8.615850e-47 |
Msa1118140 | Msa1189990 | 0.819106 | 1.382432e-52 | -8.615850e-47 |
Msa1159360 | Msa1189990 | 0.803893 | 2.805480e-49 | -8.615850e-47 |
Msa1166970 | Msa1189990 | 0.804405 | 2.194554e-49 | -8.615850e-47 |
Msa1167170 | Msa1189990 | 0.824184 | 9.261613e-54 | -8.615850e-47 |
Msa1189990 | Msa1201990 | 0.800847 | 1.189183e-48 | -8.615850e-47 |
Msa1189990 | Msa1221200 | -0.804342 | 2.261878e-49 | -8.615850e-47 |
Msa1189990 | Msa1223460 | 0.819168 | 1.338441e-52 | -8.615850e-47 |
Msa1189990 | Msa1254770 | 0.809342 | 1.984478e-50 | -8.615850e-47 |
Msa1189990 | Msa1254800 | 0.808140 | 3.585405e-50 | -8.615850e-47 |
Msa1189990 | Msa1329990 | 0.803792 | 2.943182e-49 | -8.615850e-47 |
Msa1189990 | Msa1358870 | -0.802608 | 5.174637e-49 | -8.615850e-47 |
Msa1189990 | Msa1373950 | 0.806445 | 8.196890e-50 | -8.615850e-47 |
Msa1189990 | Msa1385900 | 0.805439 | 1.334208e-49 | -8.615850e-47 |
Msa1189990 | Msa1395570 | 0.804924 | 1.709945e-49 | -8.615850e-47 |
Msa1189990 | Msa1427830 | 0.802911 | 4.480693e-49 | -8.615850e-47 |
Msa1189990 | Msa1454110 | 0.811840 | 5.725451e-51 | -8.615850e-47 |
Msa1189990 | Msa1456810 | 0.846750 | 1.784714e-59 | -8.615850e-47 |
Msa1189990 | Msa1460310 | -0.819834 | 9.429528e-53 | -8.615850e-47 |
Msa0505390 | Msa1189990 | 0.800814 | 1.207949e-48 | -8.615850e-47 |
Msa0524120 | Msa1189990 | 0.801032 | 1.090017e-48 | -8.615850e-47 |
Msa0540320 | Msa1189990 | 0.823638 | 1.243310e-53 | -8.615850e-47 |
Msa0563910 | Msa1189990 | 0.806399 | 8.382612e-50 | -8.615850e-47 |
Msa0576420 | Msa1189990 | 0.810942 | 8.968344e-51 | -8.615850e-47 |
Msa0582110 | Msa1189990 | 0.854942 | 8.795561e-62 | -8.615850e-47 |
Msa0596100 | Msa1189990 | 0.847854 | 8.882756e-60 | -8.615850e-47 |
Msa0847200 | Msa1189990 | 0.803071 | 4.152657e-49 | -8.615850e-47 |
Msa0887000 | Msa1189990 | 0.800036 | 1.739843e-48 | -8.615850e-47 |
Msa0903730 | Msa1189990 | 0.800353 | 1.499647e-48 | -8.615850e-47 |
Msa0909710 | Msa1189990 | 0.809830 | 1.558473e-50 | -8.615850e-47 |
Msa0951720 | Msa1189990 | 0.811111 | 8.241525e-51 | -8.615850e-47 |
Msa0964680 | Msa1189990 | 0.807503 | 4.895565e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1189990 | MtrunA17_Chr8g0358881 | 92.823 | 418 | 8 | 2 | 1 | 396 | 1 | 418 | 0.0 | 783 |
Msa1189990 | MtrunA17_Chr2g0299491 | 44.940 | 336 | 156 | 7 | 69 | 378 | 66 | 398 | 1.71e-81 | 256 |
Msa1189990 | MtrunA17_Chr4g0071061 | 48.615 | 325 | 138 | 8 | 69 | 367 | 60 | 381 | 3.32e-81 | 255 |
Msa1189990 | MtrunA17_Chr7g0257041 | 37.072 | 321 | 179 | 9 | 6 | 311 | 3 | 315 | 4.16e-53 | 181 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1189990 | AT1G79050.1 | 74.112 | 394 | 73 | 4 | 6 | 370 | 15 | 408 | 0.0 | 574 |
Msa1189990 | AT1G79050.2 | 80.255 | 314 | 54 | 3 | 6 | 311 | 15 | 328 | 1.96e-177 | 498 |
Msa1189990 | AT2G19490.1 | 46.341 | 328 | 147 | 7 | 66 | 367 | 58 | 382 | 8.65e-79 | 249 |
Msa1189990 | AT3G10140.1 | 35.942 | 345 | 189 | 7 | 49 | 367 | 48 | 386 | 4.52e-52 | 179 |
Msa1189990 | AT3G32920.1 | 50.495 | 202 | 79 | 5 | 97 | 297 | 12 | 193 | 1.20e-48 | 165 |
Msa1189990 | AT3G32920.5 | 47.590 | 166 | 71 | 2 | 97 | 261 | 12 | 162 | 2.29e-39 | 139 |
Msa1189990 | AT3G32920.3 | 50.360 | 139 | 53 | 3 | 97 | 234 | 12 | 135 | 1.89e-30 | 116 |
Msa1189990 | AT3G32920.2 | 50.360 | 139 | 53 | 3 | 97 | 234 | 12 | 135 | 1.89e-30 | 116 |
Msa1189990 | AT3G32920.4 | 52.703 | 74 | 35 | 0 | 161 | 234 | 9 | 82 | 6.18e-14 | 68.9 |
Find 111 sgRNAs with CRISPR-Local
Find 488 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGGTCTTCCCACTGCTTTC+TGG | 0.116261 | 8_1:-32753037 | None:intergenic |
GCACTCTTACACGAACTTTA+AGG | 0.157262 | 8_1:-32754214 | None:intergenic |
TATTCTTTCTTCAACATAAA+TGG | 0.167081 | 8_1:+32759243 | Msa1189990:three_prime_UTR |
CAAGTACCTTATATCTTATT+TGG | 0.169890 | 8_1:-32753737 | None:intergenic |
TATATCTGTTTCCAGATATT+TGG | 0.171997 | 8_1:+32753013 | Msa1189990:intron |
TTGTAGATTGGTGTCTATTA+TGG | 0.178441 | 8_1:+32753889 | Msa1189990:intron |
AAAATGAAAGTGTGGGGTTT+TGG | 0.250782 | 8_1:-32750581 | None:intergenic |
ATTCCACCACTTGTCACTTC+TGG | 0.258174 | 8_1:-32753916 | None:intergenic |
CTTTGACTCGACCAGTTTAA+TGG | 0.270508 | 8_1:+32759393 | Msa1189990:three_prime_UTR |
ACCTCTACAATTCTTCCTTT+TGG | 0.272094 | 8_1:-32752667 | None:intergenic |
TTTGAACCAAATAAGATATA+AGG | 0.274444 | 8_1:+32753731 | Msa1189990:CDS |
TTGGCTTTAGACTTTGCTTT+AGG | 0.292232 | 8_1:+32752634 | Msa1189990:CDS |
TTGACGCTCGTTTCGTTGAT+AGG | 0.300352 | 8_1:+32750735 | Msa1189990:CDS |
CGACTAGAAATTCGTTCTAT+AGG | 0.309774 | 8_1:+32753964 | Msa1189990:CDS |
GCCAACTTCTTCATCTCCTT+TGG | 0.320234 | 8_1:-32754192 | None:intergenic |
TGGACGTAGCTTTAATGATT+AGG | 0.325944 | 8_1:+32759269 | Msa1189990:three_prime_UTR |
AAGAGTACAACCAGCTTTAG+AGG | 0.344065 | 8_1:-32753703 | None:intergenic |
TTCTTCAACATAAATGGAAC+TGG | 0.368702 | 8_1:+32759249 | Msa1189990:three_prime_UTR |
AAATAGAAGAGTAGAAGAAA+AGG | 0.375081 | 8_1:-32750612 | None:intergenic |
AGGGCTCTTGGTACAGTTAT+GGG | 0.379417 | 8_1:+32756337 | Msa1189990:CDS |
AATGATATAAACAGCTCTTT+CGG | 0.394125 | 8_1:+32752389 | Msa1189990:CDS |
AAGTTTGGGTGATAGATTGC+AGG | 0.396964 | 8_1:+32759204 | Msa1189990:three_prime_UTR |
ATACATATATAGGGAGAGAT+TGG | 0.403319 | 8_1:+32753615 | Msa1189990:intron |
AATGCAGCAAATGGGATTGC+AGG | 0.404303 | 8_1:+32753638 | Msa1189990:CDS |
AGAGATTGGAATGCAGCAAA+TGG | 0.404804 | 8_1:+32753629 | Msa1189990:CDS |
CACTGGTTCGACCATTAAAC+TGG | 0.407237 | 8_1:-32759404 | None:intergenic |
GACTAGAAATTCGTTCTATA+GGG | 0.407782 | 8_1:+32753965 | Msa1189990:CDS |
AAAAGGTAGTGTTACAAGAT+TGG | 0.415652 | 8_1:+32752412 | Msa1189990:CDS |
AAGGGCTCTTGGTACAGTTA+TGG | 0.419313 | 8_1:+32756336 | Msa1189990:CDS |
GATTGTGTTGTGAAAGAAAC+AGG | 0.421068 | 8_1:-32750453 | None:intergenic |
TTAGACTTTGCTTTAGGTGG+TGG | 0.421314 | 8_1:+32752640 | Msa1189990:CDS |
GTTCACTTCAACTTCTGCTC+GGG | 0.424046 | 8_1:-32753513 | None:intergenic |
ATAAACAGCTCTTTCGGAAA+AGG | 0.435353 | 8_1:+32752395 | Msa1189990:CDS |
CAAAACATTGCAGTACTTGA+AGG | 0.442689 | 8_1:+32757086 | Msa1189990:CDS |
TCGTATGTGAAAAGCTTGTT+TGG | 0.444340 | 8_1:-32759106 | None:intergenic |
ATCAGTTTACATGAACATAA+TGG | 0.447039 | 8_1:-32759315 | None:intergenic |
CAAGCTTTGCGTAAGATGTC+TGG | 0.449604 | 8_1:+32753675 | Msa1189990:CDS |
AAAGGTAGTGTTACAAGATT+GGG | 0.449775 | 8_1:+32752413 | Msa1189990:CDS |
GATGAATATTGTCTTAAAGA+AGG | 0.452516 | 8_1:+32756317 | Msa1189990:CDS |
AGTTCAACCGATTGCATCAC+TGG | 0.459923 | 8_1:-32759421 | None:intergenic |
TTACATGAACATAATGGAAC+AGG | 0.463629 | 8_1:-32759309 | None:intergenic |
AAAGAGTGGAACTTCTTGAT+AGG | 0.465867 | 8_1:-32750638 | None:intergenic |
AGAGCCATCTCTCCATGATC+TGG | 0.469294 | 8_1:-32753298 | None:intergenic |
CTTTGGTCGGGTAGTCGGAC+TGG | 0.483764 | 8_1:+32759461 | Msa1189990:three_prime_UTR |
AATAGAAGAGTAGAAGAAAA+GGG | 0.485920 | 8_1:-32750611 | None:intergenic |
CAGACATCTTACGCAAAGCT+TGG | 0.486162 | 8_1:-32753674 | None:intergenic |
GTCTAAAGCCAAACATCCAC+TGG | 0.486365 | 8_1:-32752623 | None:intergenic |
TTGATTTCCGTTTAGGCCAA+AGG | 0.486711 | 8_1:+32754176 | Msa1189990:intron |
GGTGATTAAACTGATGCCTT+TGG | 0.487078 | 8_1:+32759444 | Msa1189990:three_prime_UTR |
GCAGATCGTATGTGTAGATC+TGG | 0.491077 | 8_1:+32753446 | Msa1189990:CDS |
TTAGGTGGTGGTCTTCCAAA+AGG | 0.491192 | 8_1:+32752652 | Msa1189990:CDS |
TCTTCTAGAAGAAGTTGAAA+AGG | 0.492340 | 8_1:+32757119 | Msa1189990:CDS |
AAATTGATATGCAGGTAGTT+CGG | 0.498228 | 8_1:+32759060 | Msa1189990:intron |
GCTTTAGACTTTGCTTTAGG+TGG | 0.499082 | 8_1:+32752637 | Msa1189990:CDS |
TCAACTTCTTCTAGAAGATG+TGG | 0.501054 | 8_1:-32757114 | None:intergenic |
TTAAACTGATGCCTTTGGTC+GGG | 0.504118 | 8_1:+32759449 | Msa1189990:three_prime_UTR |
TGACGCTCGTTTCGTTGATA+GGG | 0.505105 | 8_1:+32750736 | Msa1189990:CDS |
TTGTCTTAAAGAAGGGCTCT+TGG | 0.505194 | 8_1:+32756325 | Msa1189990:CDS |
GTTTATGTCATGCAGAAGCT+AGG | 0.506088 | 8_1:+32753181 | Msa1189990:intron |
TCATGCTATTGCAGAAGTAC+AGG | 0.512089 | 8_1:+32753069 | Msa1189990:CDS |
CAAAGAGAGGACGCAAAGAG+TGG | 0.513087 | 8_1:-32750652 | None:intergenic |
ATGAATATTGTCTTAAAGAA+GGG | 0.513377 | 8_1:+32756318 | Msa1189990:CDS |
ATCGTGTGCCAACCAGATCA+TGG | 0.514896 | 8_1:+32753286 | Msa1189990:CDS |
GTTACAAGATTGGGCAGTGC+CGG | 0.520059 | 8_1:+32752422 | Msa1189990:CDS |
AGTGATGCAATCGGTTGAAC+TGG | 0.524177 | 8_1:+32759423 | Msa1189990:three_prime_UTR |
AAGGTAAAATTGAAATTCAA+AGG | 0.526847 | 8_1:+32759365 | Msa1189990:three_prime_UTR |
TGTTCACTTCAACTTCTGCT+CGG | 0.531981 | 8_1:-32753514 | None:intergenic |
GTGGTTTCAAAATGAAAGTG+TGG | 0.533347 | 8_1:-32750589 | None:intergenic |
GAGATTGGAATGCAGCAAAT+GGG | 0.536381 | 8_1:+32753630 | Msa1189990:CDS |
TATATTCTAGCAAAAGGCAC+TGG | 0.536623 | 8_1:+32752355 | Msa1189990:intron |
GATGCCTTTGGTCGGGTAGT+CGG | 0.537020 | 8_1:+32759456 | Msa1189990:three_prime_UTR |
TCAAATATATCTTCGTCTTG+AGG | 0.538183 | 8_1:-32759146 | None:intergenic |
GTTCGGTCTTCAATGAATGA+TGG | 0.538565 | 8_1:+32759077 | Msa1189990:CDS |
TCTTCGTCTTGAGGAAGCAC+TGG | 0.538932 | 8_1:-32759137 | None:intergenic |
CAACTTCTTCTAGAAGATGT+GGG | 0.540906 | 8_1:-32757113 | None:intergenic |
TCTGGAAATGCCTCTAAAGC+TGG | 0.543928 | 8_1:+32753693 | Msa1189990:CDS |
TGGTTTCAAAATGAAAGTGT+GGG | 0.543933 | 8_1:-32750588 | None:intergenic |
TCGGGGAGTGAGAGCTGAGA+CGG | 0.547108 | 8_1:-32753495 | None:intergenic |
GCCAAAGGAGATGAAGAAGT+TGG | 0.567990 | 8_1:+32754191 | Msa1189990:CDS |
ATTAAACTGATGCCTTTGGT+CGG | 0.568117 | 8_1:+32759448 | Msa1189990:three_prime_UTR |
ACAAGATTGGGCAGTGCCGG+TGG | 0.569761 | 8_1:+32752425 | Msa1189990:CDS |
TTCACTTCAACTTCTGCTCG+GGG | 0.573704 | 8_1:-32753512 | None:intergenic |
CCAACCAGATCATGGAGAGA+TGG | 0.574272 | 8_1:+32753294 | Msa1189990:CDS |
CGCAATAGATCTCATTTGTG+TGG | 0.574765 | 8_1:+32753469 | Msa1189990:CDS |
CCTACCGCTTTAGAATATGC+TGG | 0.575256 | 8_1:-32753244 | None:intergenic |
GGTCGAACCAGTGATGCAAT+CGG | 0.576844 | 8_1:+32759414 | Msa1189990:three_prime_UTR |
CCATCTCTCCATGATCTGGT+TGG | 0.583917 | 8_1:-32753294 | None:intergenic |
TACATACACTAATGCTCCAC+CGG | 0.589465 | 8_1:-32752441 | None:intergenic |
AATCCAGAAGTGACAAGTGG+TGG | 0.590086 | 8_1:+32753913 | Msa1189990:CDS |
AATAGCATGAAGTGCTAGAG+TGG | 0.603325 | 8_1:-32753056 | None:intergenic |
CCAGCATATTCTAAAGCGGT+AGG | 0.611416 | 8_1:+32753244 | Msa1189990:CDS |
TGTAAGAGTGCAAAAGAGCA+AGG | 0.621297 | 8_1:+32754226 | Msa1189990:CDS |
TGATCCAGCATATTCTAAAG+CGG | 0.621566 | 8_1:+32753240 | Msa1189990:CDS |
AGAAGAGTAGAAGAAAAGGG+TGG | 0.622878 | 8_1:-32750608 | None:intergenic |
GGTACAGTTATGGGGACCAT+CGG | 0.623884 | 8_1:+32756346 | Msa1189990:CDS |
TTCTATAGGGAAGATAAAGT+CGG | 0.627679 | 8_1:+32753978 | Msa1189990:CDS |
GGTTTCAAAATGAAAGTGTG+GGG | 0.630517 | 8_1:-32750587 | None:intergenic |
GGGCTCTTGGTACAGTTATG+GGG | 0.632195 | 8_1:+32756338 | Msa1189990:CDS |
TCCAAAAGGAAGAATTGTAG+AGG | 0.632337 | 8_1:+32752666 | Msa1189990:CDS |
TATTTGGACCAGAAAGCAGT+GGG | 0.635930 | 8_1:+32753029 | Msa1189990:CDS |
AAGATTCAATGCGAACTCAA+CGG | 0.646437 | 8_1:+32750695 | Msa1189990:CDS |
ATATTCTAAAGCGGTAGGAG+TGG | 0.652399 | 8_1:+32753249 | Msa1189990:CDS |
CAGTCCGACTACCCGACCAA+AGG | 0.653290 | 8_1:-32759460 | None:intergenic |
TATGTCATGCAGAAGCTAGG+AGG | 0.653728 | 8_1:+32753184 | Msa1189990:intron |
TTAGAAGAAGAAGCAAAGAG+AGG | 0.658195 | 8_1:-32750665 | None:intergenic |
TCTTGAAACAGGTTAGGACA+AGG | 0.674813 | 8_1:+32757057 | Msa1189990:intron |
TCTAAAGCCAAACATCCACT+GGG | 0.679556 | 8_1:-32752622 | None:intergenic |
GGAAATCCAGAAGTGACAAG+TGG | 0.683852 | 8_1:+32753910 | Msa1189990:CDS |
ATATTTGGACCAGAAAGCAG+TGG | 0.688023 | 8_1:+32753028 | Msa1189990:CDS |
GAAACGAGCGTCAAAATCAG+CGG | 0.693261 | 8_1:-32750726 | None:intergenic |
TTTGAAGAAAGTCTGTGACG+AGG | 0.731789 | 8_1:+32759164 | Msa1189990:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | GTACTTTTATTATATAATTT+AGG | + | chr8_1:32753561-32753580 | Msa1189990:intron | 10.0% |
!!! | ACTTTTATTATATAATTTAG+GGG | + | chr8_1:32753563-32753582 | Msa1189990:intron | 10.0% |
!! | TATTATAATCAAAAGATATT+AGG | - | chr8_1:32754121-32754140 | None:intergenic | 10.0% |
!! | AAAATAAAAGAAAATTGAAT+TGG | + | chr8_1:32755801-32755820 | Msa1189990:intron | 10.0% |
!!! | ATTATTTTGAAAAGATTTTA+GGG | + | chr8_1:32755835-32755854 | Msa1189990:intron | 10.0% |
!! | AAAATGAAAATTCAAAATAA+TGG | - | chr8_1:32756263-32756282 | None:intergenic | 10.0% |
!!! | TTTTCTATTTATTTAAGATT+AGG | - | chr8_1:32757230-32757249 | None:intergenic | 10.0% |
!! | TCTTAAATAAATAGAAAATT+AGG | + | chr8_1:32757232-32757251 | Msa1189990:intron | 10.0% |
!!! | TAATAAAAACTTTTGAAATA+TGG | - | chr8_1:32757552-32757571 | None:intergenic | 10.0% |
!!! | TATCTTGTTATTTTGAAAAA+TGG | + | chr8_1:32750541-32750560 | Msa1189990:exon | 15.0% |
!!! | ATTATTTTTTTGGATCAATT+TGG | + | chr8_1:32751995-32752014 | Msa1189990:intron | 15.0% |
!!! | AATTTTAATTATTGTTCTAC+TGG | + | chr8_1:32752154-32752173 | Msa1189990:intron | 15.0% |
!! | ATAATTGTTCTATTGAAAAT+AGG | + | chr8_1:32752239-32752258 | Msa1189990:intron | 15.0% |
!!! | AAATAACCTACTATATTTTT+TGG | - | chr8_1:32752276-32752295 | None:intergenic | 15.0% |
!!! | TTATTTGTTACATTGTTAAT+GGG | + | chr8_1:32752290-32752309 | Msa1189990:intron | 15.0% |
!! | AATCAAAAATAAATGGAATT+TGG | - | chr8_1:32752915-32752934 | None:intergenic | 15.0% |
!! | ATCACAAAATCAAAAATAAA+TGG | - | chr8_1:32752922-32752941 | None:intergenic | 15.0% |
!!! | ATAAATTGATAATTATCATC+AGG | - | chr8_1:32753127-32753146 | None:intergenic | 15.0% |
!! | CAGAAGAATAAAAATAATTA+TGG | + | chr8_1:32754595-32754614 | Msa1189990:intron | 15.0% |
!!! | TGTAACATTTTCTTATAAAT+TGG | - | chr8_1:32754839-32754858 | None:intergenic | 15.0% |
!! | AATTAACATCACATTAAATA+CGG | + | chr8_1:32755687-32755706 | Msa1189990:intron | 15.0% |
!!! | GATTATTTTGAAAAGATTTT+AGG | + | chr8_1:32755834-32755853 | Msa1189990:intron | 15.0% |
!! | AAATTATGATAATAAATCTG+TGG | + | chr8_1:32756665-32756684 | Msa1189990:intron | 15.0% |
!! | ATAATAATAGCTAAGTATTA+TGG | + | chr8_1:32757264-32757283 | Msa1189990:intron | 15.0% |
!! | TTAAAAAGTAACGTTTATAT+AGG | - | chr8_1:32757816-32757835 | None:intergenic | 15.0% |
!! | AGAAAAATAAAAGAGAAAAG+GGG | - | chr8_1:32750769-32750788 | None:intergenic | 20.0% |
!! | CAGAAAAATAAAAGAGAAAA+GGG | - | chr8_1:32750770-32750789 | None:intergenic | 20.0% |
!! | GGATGACAAATTAAAAATTT+GGG | - | chr8_1:32751205-32751224 | None:intergenic | 20.0% |
!! | AGGATGACAAATTAAAAATT+TGG | - | chr8_1:32751206-32751225 | None:intergenic | 20.0% |
!!! | TCATCCTTTTTTATTTTTTC+TGG | + | chr8_1:32751219-32751238 | Msa1189990:intron | 20.0% |
!! | CAAACCAGAAAAAATAAAAA+AGG | - | chr8_1:32751226-32751245 | None:intergenic | 20.0% |
!!! | TAATTTTAGATCTCTTTTGA+TGG | - | chr8_1:32751625-32751644 | None:intergenic | 20.0% |
!!! | TTAGACAAATTTTATAAAGC+GGG | - | chr8_1:32751795-32751814 | None:intergenic | 20.0% |
!!! | CTTAGACAAATTTTATAAAG+CGG | - | chr8_1:32751796-32751815 | None:intergenic | 20.0% |
!! | CTTTATAAAATTTGTCTAAG+TGG | + | chr8_1:32751796-32751815 | Msa1189990:intron | 20.0% |
!! | AACAAACAACAAATAATGAA+GGG | - | chr8_1:32751832-32751851 | None:intergenic | 20.0% |
!! | TAACAAACAACAAATAATGA+AGG | - | chr8_1:32751833-32751852 | None:intergenic | 20.0% |
!!! | TTGTTGTTTGTTATAGAATT+TGG | + | chr8_1:32751840-32751859 | Msa1189990:intron | 20.0% |
!!! | TATGATTACATATTTTCACT+TGG | + | chr8_1:32751892-32751911 | Msa1189990:intron | 20.0% |
!!! | ATGTGCATATGATAATTTTT+TGG | + | chr8_1:32751959-32751978 | Msa1189990:intron | 20.0% |
!! | ATACATTACAATTATTAACG+AGG | - | chr8_1:32752056-32752075 | None:intergenic | 20.0% |
!!! | GTTATTTGTTACATTGTTAA+TGG | + | chr8_1:32752289-32752308 | Msa1189990:intron | 20.0% |
!! | TGAATTTATATTCTAGCAAA+AGG | + | chr8_1:32752349-32752368 | Msa1189990:intron | 20.0% |
!! | ATATTGTGCTTAAGATTTAT+TGG | + | chr8_1:32752772-32752791 | Msa1189990:intron | 20.0% |
!!! | TTCTAAGCAAAATGATTTTA+GGG | + | chr8_1:32752834-32752853 | Msa1189990:intron | 20.0% |
!! | ATTGAAGTATAAAAAAGTAG+AGG | - | chr8_1:32752973-32752992 | None:intergenic | 20.0% |
!!! | TCTACTTTTTTATACTTCAA+TGG | + | chr8_1:32752972-32752991 | Msa1189990:intron | 20.0% |
!!! | CTACTTTTTTATACTTCAAT+GGG | + | chr8_1:32752973-32752992 | Msa1189990:intron | 20.0% |
!! | TTTGAACCAAATAAGATATA+AGG | + | chr8_1:32753731-32753750 | Msa1189990:CDS | 20.0% |
!!! | ATCTCTTATTTCTGTTTATA+TGG | + | chr8_1:32753847-32753866 | Msa1189990:intron | 20.0% |
!!! | TGTAAAAAGTACTGATATTT+TGG | - | chr8_1:32754080-32754099 | None:intergenic | 20.0% |
!! | TTTCAGATATATAAATACTG+TGG | - | chr8_1:32754255-32754274 | None:intergenic | 20.0% |
!! | TTTACTATTTACTTAGGATT+AGG | - | chr8_1:32754692-32754711 | None:intergenic | 20.0% |
!!! | CCTAATTTTACTATTTACTT+AGG | - | chr8_1:32754698-32754717 | None:intergenic | 20.0% |
!! | CCTAAGTAAATAGTAAAATT+AGG | + | chr8_1:32754695-32754714 | Msa1189990:intron | 20.0% |
!! | TACTATTTATAAGAGAACTT+CGG | + | chr8_1:32754799-32754818 | Msa1189990:intron | 20.0% |
!!! | AGAAAATGTTACAACTTTTA+TGG | + | chr8_1:32754846-32754865 | Msa1189990:intron | 20.0% |
!! | ATGTGTAAAAACATTCAAAA+AGG | + | chr8_1:32754951-32754970 | Msa1189990:intron | 20.0% |
!!! | ATATTTGTTAAAATCAGCAA+TGG | - | chr8_1:32755215-32755234 | None:intergenic | 20.0% |
!!! | TGTCTAATATCATTTTTGTT+TGG | - | chr8_1:32755246-32755265 | None:intergenic | 20.0% |
!!! | TTTTAGAGTTTACATAAAAC+TGG | - | chr8_1:32755899-32755918 | None:intergenic | 20.0% |
!!! | ATTTTCAAAAGCTAAAACTA+GGG | + | chr8_1:32755953-32755972 | Msa1189990:intron | 20.0% |
!! | AGATATAATTGTTGTATTCT+TGG | + | chr8_1:32756080-32756099 | Msa1189990:intron | 20.0% |
!! | ATGAATATTGTCTTAAAGAA+GGG | + | chr8_1:32756318-32756337 | Msa1189990:CDS | 20.0% |
!! | AACAGAATAAAAAAGAAACA+CGG | - | chr8_1:32756894-32756913 | None:intergenic | 20.0% |
!! | AATGTTGTGATATTATGTTA+GGG | + | chr8_1:32757432-32757451 | Msa1189990:intron | 20.0% |
!!! | AATACTAACTTCAAGTTTTA+TGG | - | chr8_1:32757477-32757496 | None:intergenic | 20.0% |
!!! | AACTGAAGTGTAATTTTTTT+GGG | - | chr8_1:32757593-32757612 | None:intergenic | 20.0% |
!!! | TAACTGAAGTGTAATTTTTT+TGG | - | chr8_1:32757594-32757613 | None:intergenic | 20.0% |
!! | CAAATTATAGTGTAATTGTT+AGG | + | chr8_1:32757858-32757877 | Msa1189990:intron | 20.0% |
!! | TAAAGATTACTAATGAATGA+AGG | + | chr8_1:32757958-32757977 | Msa1189990:intron | 20.0% |
!! | AAAAGATTAAATTGATATGC+AGG | + | chr8_1:32759052-32759071 | Msa1189990:intron | 20.0% |
!!! | TTGATTTTTCTGATAAGTTT+GGG | + | chr8_1:32759190-32759209 | Msa1189990:three_prime_UTR | 20.0% |
!! | TATTCTTTCTTCAACATAAA+TGG | + | chr8_1:32759243-32759262 | Msa1189990:three_prime_UTR | 20.0% |
!! | AAGGTAAAATTGAAATTCAA+AGG | + | chr8_1:32759365-32759384 | Msa1189990:three_prime_UTR | 20.0% |
!!! | GTTATTTTGAAAAATGGACT+TGG | + | chr8_1:32750547-32750566 | Msa1189990:exon | 25.0% |
! | AATAGAAGAGTAGAAGAAAA+GGG | - | chr8_1:32750614-32750633 | None:intergenic | 25.0% |
! | AAATAGAAGAGTAGAAGAAA+AGG | - | chr8_1:32750615-32750634 | None:intergenic | 25.0% |
! | GCAGAAAAATAAAAGAGAAA+AGG | - | chr8_1:32750771-32750790 | None:intergenic | 25.0% |
!! | TATGAACAGTTTTACTAGTT+TGG | + | chr8_1:32750860-32750879 | Msa1189990:intron | 25.0% |
! | TATTTACGAGAAAGTGAATT+AGG | - | chr8_1:32750944-32750963 | None:intergenic | 25.0% |
! | TACTGAATATAGAAAAGAGA+AGG | + | chr8_1:32751248-32751267 | Msa1189990:intron | 25.0% |
! | ACACACAAATCATATATTAG+AGG | + | chr8_1:32751410-32751429 | Msa1189990:intron | 25.0% |
! | AACATATTTGAGAGAAAGTT+GGG | + | chr8_1:32751445-32751464 | Msa1189990:intron | 25.0% |
! | AGTTCTCATTATAGACAAAA+TGG | + | chr8_1:32751470-32751489 | Msa1189990:intron | 25.0% |
!! | AAATGGTAGAGTTTTTCTTT+AGG | + | chr8_1:32751487-32751506 | Msa1189990:intron | 25.0% |
! | TAGAATTTGGTTGATCAATA+TGG | + | chr8_1:32751853-32751872 | Msa1189990:intron | 25.0% |
! | GGAAAAAACAAAAGATGATA+TGG | - | chr8_1:32752091-32752110 | None:intergenic | 25.0% |
!!! | CAGTTATTTTGTTAGCTTTT+AGG | + | chr8_1:32752180-32752199 | Msa1189990:intron | 25.0% |
!!! | GTTCAATGTTTGTTATGAAA+TGG | + | chr8_1:32752210-32752229 | Msa1189990:intron | 25.0% |
! | AGTATGCCAAAAAATATAGT+AGG | + | chr8_1:32752267-32752286 | Msa1189990:intron | 25.0% |
! | AATGATATAAACAGCTCTTT+CGG | + | chr8_1:32752389-32752408 | Msa1189990:CDS | 25.0% |
! | AATGTAAATAAGTTCACCAA+TGG | - | chr8_1:32752725-32752744 | None:intergenic | 25.0% |
!! | CTAAAATCATTTTGCTTAGA+AGG | - | chr8_1:32752835-32752854 | None:intergenic | 25.0% |
!! | CTTCTAAGCAAAATGATTTT+AGG | + | chr8_1:32752833-32752852 | Msa1189990:intron | 25.0% |
!! | TCTAAGCAAAATGATTTTAG+GGG | + | chr8_1:32752835-32752854 | Msa1189990:intron | 25.0% |
! | TATATCTGTTTCCAGATATT+TGG | + | chr8_1:32753013-32753032 | Msa1189990:intron | 25.0% |
! | ATCATCAGGAATTAATGATT+GGG | - | chr8_1:32753113-32753132 | None:intergenic | 25.0% |
! | TATCATCAGGAATTAATGAT+TGG | - | chr8_1:32753114-32753133 | None:intergenic | 25.0% |
!! | TGGAATGGATAAGATAATTT+TGG | + | chr8_1:32753352-32753371 | Msa1189990:intron | 25.0% |
!! | AATGGATAAGATAATTTTGG+CGG | + | chr8_1:32753355-32753374 | Msa1189990:intron | 25.0% |
!!! | TGTCTTTGTTTGTTTGTTTT+AGG | + | chr8_1:32753539-32753558 | Msa1189990:intron | 25.0% |
! | CAAGTACCTTATATCTTATT+TGG | - | chr8_1:32753740-32753759 | None:intergenic | 25.0% |
!!! | GAAATAAGAGATTTTAACTG+TGG | - | chr8_1:32753839-32753858 | None:intergenic | 25.0% |
!!! | TTCTCTTTACTTTTGTAGAT+TGG | + | chr8_1:32753877-32753896 | Msa1189990:intron | 25.0% |
! | AAGGAAAATTAGTAACAGAA+AGG | - | chr8_1:32754051-32754070 | None:intergenic | 25.0% |
! | GATGAAAAAAACAACACAAA+AGG | - | chr8_1:32754283-32754302 | None:intergenic | 25.0% |
!! | TGTAAATTGGTTTATAAGGT+GGG | - | chr8_1:32754398-32754417 | None:intergenic | 25.0% |
! | TGATACTATGTTGAAGTTAT+GGG | + | chr8_1:32754556-32754575 | Msa1189990:intron | 25.0% |
! | ACTATTTATAAGAGAACTTC+GGG | + | chr8_1:32754800-32754819 | Msa1189990:intron | 25.0% |
! | AAAACAATAAATGAGCTCAT+AGG | + | chr8_1:32754975-32754994 | Msa1189990:intron | 25.0% |
! | TCTCTAATAATAATTGAGAC+TGG | + | chr8_1:32755021-32755040 | Msa1189990:intron | 25.0% |
! | TAATAATAATTGAGACTGGA+GGG | + | chr8_1:32755025-32755044 | Msa1189990:intron | 25.0% |
!!! | GTCACACTTTTTTTATTTTG+TGG | + | chr8_1:32755305-32755324 | Msa1189990:intron | 25.0% |
!!! | AAATCATTTTTGACAACTGA+TGG | + | chr8_1:32755756-32755775 | Msa1189990:intron | 25.0% |
!!! | CTTTTGAAAATGTGATTTCA+AGG | - | chr8_1:32755944-32755963 | None:intergenic | 25.0% |
!! | CATTTTCAAAAGCTAAAACT+AGG | + | chr8_1:32755952-32755971 | Msa1189990:intron | 25.0% |
! | CTGAAGATTAATCAAGATAT+TGG | + | chr8_1:32756032-32756051 | Msa1189990:intron | 25.0% |
!! | AAGATAATTAACTTGAGAAG+TGG | + | chr8_1:32756125-32756144 | Msa1189990:intron | 25.0% |
!!! | TGAATTTTCATTTTGATTGC+AGG | + | chr8_1:32756269-32756288 | Msa1189990:intron | 25.0% |
!!! | GAATTTTCATTTTGATTGCA+GGG | + | chr8_1:32756270-32756289 | Msa1189990:intron | 25.0% |
! | GATGAATATTGTCTTAAAGA+AGG | + | chr8_1:32756317-32756336 | Msa1189990:CDS | 25.0% |
! | CAATTATAGCAATCATTCAT+TGG | + | chr8_1:32756572-32756591 | Msa1189990:intron | 25.0% |
! | AATAAAAAAGAAACACGGAA+GGG | - | chr8_1:32756889-32756908 | None:intergenic | 25.0% |
! | GAAAAATGAAAACTACTCTT+AGG | - | chr8_1:32757407-32757426 | None:intergenic | 25.0% |
! | GAATGTTGTGATATTATGTT+AGG | + | chr8_1:32757431-32757450 | Msa1189990:intron | 25.0% |
! | AAAGTAACGTTTATATAGGT+GGG | - | chr8_1:32757812-32757831 | None:intergenic | 25.0% |
! | AAAAGTAACGTTTATATAGG+TGG | - | chr8_1:32757813-32757832 | None:intergenic | 25.0% |
!! | TTCTAGTTAGAATTATTCCT+TGG | - | chr8_1:32757938-32757957 | None:intergenic | 25.0% |
! | GATTTCTTATTAATGTAGTG+AGG | + | chr8_1:32757980-32757999 | Msa1189990:intron | 25.0% |
!!! | AGTAAGTTGATAAGATTGTT+AGG | - | chr8_1:32758194-32758213 | None:intergenic | 25.0% |
! | ATTAATGAAATACGAGTTTC+TGG | - | chr8_1:32758250-32758269 | None:intergenic | 25.0% |
!! | TTTAGTCAATTTTGCCTTTT+TGG | + | chr8_1:32758421-32758440 | Msa1189990:intron | 25.0% |
!! | TACTTGATTTCTTGTTTCTT+TGG | + | chr8_1:32758607-32758626 | Msa1189990:intron | 25.0% |
!! | ACTTGATTTCTTGTTTCTTT+GGG | + | chr8_1:32758608-32758627 | Msa1189990:intron | 25.0% |
!!! | GTTGATTTTTCTGATAAGTT+TGG | + | chr8_1:32759189-32759208 | Msa1189990:three_prime_UTR | 25.0% |
! | ATCAGTTTACATGAACATAA+TGG | - | chr8_1:32759318-32759337 | None:intergenic | 25.0% |
! | AAGCATAGAAACAAAAAGAA+AGG | + | chr8_1:32759346-32759365 | Msa1189990:three_prime_UTR | 25.0% |
! | TGGTTTCAAAATGAAAGTGT+GGG | - | chr8_1:32750591-32750610 | None:intergenic | 30.0% |
! | GTTTCTTTTTCTCGAATTGA+TGG | + | chr8_1:32750905-32750924 | Msa1189990:intron | 30.0% |
AGAATGCAAGACTTAAATCA+GGG | + | chr8_1:32751008-32751027 | Msa1189990:intron | 30.0% | |
AACAGGGATCAATTGTTAAT+CGG | + | chr8_1:32751090-32751109 | Msa1189990:intron | 30.0% | |
! | TTGTTCATATTTTACCCAAC+AGG | + | chr8_1:32751125-32751144 | Msa1189990:intron | 30.0% |
GAACATATTTGAGAGAAAGT+TGG | + | chr8_1:32751444-32751463 | Msa1189990:intron | 30.0% | |
ATTTGTCTAAGTGGAATCTT+TGG | + | chr8_1:32751805-32751824 | Msa1189990:intron | 30.0% | |
TAATCATATGACAGAACAGA+AGG | - | chr8_1:32751880-32751899 | None:intergenic | 30.0% | |
AAAAGGTAGTGTTACAAGAT+TGG | + | chr8_1:32752412-32752431 | Msa1189990:CDS | 30.0% | |
AAAGGTAGTGTTACAAGATT+GGG | + | chr8_1:32752413-32752432 | Msa1189990:CDS | 30.0% | |
ATGTTGTCATTCATTTCCAT+TGG | + | chr8_1:32752706-32752725 | Msa1189990:intron | 30.0% | |
GTGAACTTATTTACATTCTC+TGG | + | chr8_1:32752728-32752747 | Msa1189990:intron | 30.0% | |
ATTTACATTCTCTGGATTCT+TGG | + | chr8_1:32752736-32752755 | Msa1189990:intron | 30.0% | |
GTATGTAACAGTAGTATGTT+AGG | + | chr8_1:32752796-32752815 | Msa1189990:intron | 30.0% | |
!! | AAATGATTTTAGGGGATGTT+TGG | + | chr8_1:32752843-32752862 | Msa1189990:intron | 30.0% |
TGAGTTTGAAAAAATCACAG+TGG | + | chr8_1:32752874-32752893 | Msa1189990:intron | 30.0% | |
ATACATATATAGGGAGAGAT+TGG | + | chr8_1:32753615-32753634 | Msa1189990:intron | 30.0% | |
! | TTGTAGATTGGTGTCTATTA+TGG | + | chr8_1:32753889-32753908 | Msa1189990:intron | 30.0% |
GACTAGAAATTCGTTCTATA+GGG | + | chr8_1:32753965-32753984 | Msa1189990:CDS | 30.0% | |
TTCTATAGGGAAGATAAAGT+CGG | + | chr8_1:32753978-32753997 | Msa1189990:CDS | 30.0% | |
GATAAAGTCGGTAAGTAAAA+TGG | + | chr8_1:32753990-32754009 | Msa1189990:intron | 30.0% | |
!!! | ACTGATATTTTGGAGTAGAA+AGG | - | chr8_1:32754070-32754089 | None:intergenic | 30.0% |
AAAAGTTCGTGAATAATGCA+TGG | - | chr8_1:32754308-32754327 | None:intergenic | 30.0% | |
ATAAAACTTGTAGTAACGCA+TGG | + | chr8_1:32754346-32754365 | Msa1189990:intron | 30.0% | |
! | GTAAATTGGTTTATAAGGTG+GGG | - | chr8_1:32754397-32754416 | None:intergenic | 30.0% |
! | CTGTAAATTGGTTTATAAGG+TGG | - | chr8_1:32754399-32754418 | None:intergenic | 30.0% |
CACCTTATAAACCAATTTAC+AGG | + | chr8_1:32754397-32754416 | Msa1189990:intron | 30.0% | |
AATAATGATACCACATGTCA+TGG | + | chr8_1:32754516-32754535 | Msa1189990:intron | 30.0% | |
AACTTCAACATAGTATCAGA+GGG | - | chr8_1:32754554-32754573 | None:intergenic | 30.0% | |
TAACTTCAACATAGTATCAG+AGG | - | chr8_1:32754555-32754574 | None:intergenic | 30.0% | |
CTGATACTATGTTGAAGTTA+TGG | + | chr8_1:32754555-32754574 | Msa1189990:intron | 30.0% | |
TCTTATGCACCTATAAATAG+GGG | - | chr8_1:32754667-32754686 | None:intergenic | 30.0% | |
GTCTTATGCACCTATAAATA+GGG | - | chr8_1:32754668-32754687 | None:intergenic | 30.0% | |
! | AGTCTTATGCACCTATAAAT+AGG | - | chr8_1:32754669-32754688 | None:intergenic | 30.0% |
TCTTATAAATAGTAGCAGAG+GGG | - | chr8_1:32754793-32754812 | None:intergenic | 30.0% | |
CTCTTATAAATAGTAGCAGA+GGG | - | chr8_1:32754794-32754813 | None:intergenic | 30.0% | |
TCTCTTATAAATAGTAGCAG+AGG | - | chr8_1:32754795-32754814 | None:intergenic | 30.0% | |
GCACACAGTAATATTAAATG+AGG | - | chr8_1:32754901-32754920 | None:intergenic | 30.0% | |
CTAATAATAATTGAGACTGG+AGG | + | chr8_1:32755024-32755043 | Msa1189990:intron | 30.0% | |
!!! | CCTTTAAGTTTTAGCTTGAA+AGG | - | chr8_1:32755097-32755116 | None:intergenic | 30.0% |
CCTTTCAAGCTAAAACTTAA+AGG | + | chr8_1:32755094-32755113 | Msa1189990:intron | 30.0% | |
AAAATCAGCAATGGTTTCTT+CGG | - | chr8_1:32755206-32755225 | None:intergenic | 30.0% | |
!!! | ACTTTTAAGTTGGTTACTTC+AGG | - | chr8_1:32755278-32755297 | None:intergenic | 30.0% |
TGAAGTAACCAACTTAAAAG+TGG | + | chr8_1:32755277-32755296 | Msa1189990:intron | 30.0% | |
!!! | TTTTATTTTGTGGTTGCTGT+CGG | + | chr8_1:32755315-32755334 | Msa1189990:intron | 30.0% |
! | CTCTCTTAATTTGGTTGTTT+CGG | - | chr8_1:32755377-32755396 | None:intergenic | 30.0% |
AAACAACCAAATTAAGAGAG+AGG | + | chr8_1:32755377-32755396 | Msa1189990:intron | 30.0% | |
! | TTGTACTTTATCCTCTAAAG+CGG | + | chr8_1:32755641-32755660 | Msa1189990:intron | 30.0% |
!! | AATTTGACTCCTCTAAAATG+AGG | - | chr8_1:32755671-32755690 | None:intergenic | 30.0% |
!! | TTAACTTGAGAAGTGGTTTT+AGG | + | chr8_1:32756132-32756151 | Msa1189990:intron | 30.0% |
GCTGAATTCGATATTTCATT+TGG | + | chr8_1:32756175-32756194 | Msa1189990:intron | 30.0% | |
ATTCGATATTTCATTTGGAG+AGG | + | chr8_1:32756180-32756199 | Msa1189990:intron | 30.0% | |
TTCGATATTTCATTTGGAGA+GGG | + | chr8_1:32756181-32756200 | Msa1189990:intron | 30.0% | |
!! | TTGACTTGTAAAGAGAAAGA+CGG | + | chr8_1:32756622-32756641 | Msa1189990:intron | 30.0% |
TAGCAGAGATCAAATTAGAT+AGG | + | chr8_1:32756698-32756717 | Msa1189990:intron | 30.0% | |
ATTATTGTAGTTGCGTGATA+TGG | + | chr8_1:32756756-32756775 | Msa1189990:intron | 30.0% | |
TTGAAATGTAAACAGTGTCT+AGG | - | chr8_1:32756801-32756820 | None:intergenic | 30.0% | |
GAATAAAAAAGAAACACGGA+AGG | - | chr8_1:32756890-32756909 | None:intergenic | 30.0% | |
! | TCTTCTAGAAGAAGTTGAAA+AGG | + | chr8_1:32757119-32757138 | Msa1189990:CDS | 30.0% |
ATATAAGTCTAGCATATAGC+AGG | - | chr8_1:32757159-32757178 | None:intergenic | 30.0% | |
! | CACTAACCTCTTATTTATAG+AGG | + | chr8_1:32757195-32757214 | Msa1189990:intron | 30.0% |
CTTGTACCTCTATAAATAAG+AGG | - | chr8_1:32757204-32757223 | None:intergenic | 30.0% | |
GTATTATGGAACTAAATCCT+AGG | + | chr8_1:32757278-32757297 | Msa1189990:intron | 30.0% | |
!! | TGTTCTAGAAATTATCTCCT+AGG | - | chr8_1:32757298-32757317 | None:intergenic | 30.0% |
! | TATCTTAATGACAGAGTATC+TGG | + | chr8_1:32757373-32757392 | Msa1189990:intron | 30.0% |
! | ATCTTAATGACAGAGTATCT+GGG | + | chr8_1:32757374-32757393 | Msa1189990:intron | 30.0% |
!! | GAGTAGTTTTCATTTTTCCT+TGG | + | chr8_1:32757409-32757428 | Msa1189990:intron | 30.0% |
CATAATATCACAACATTCCA+AGG | - | chr8_1:32757429-32757448 | None:intergenic | 30.0% | |
TTTATGGAAGTAGACAATCT+AGG | - | chr8_1:32757461-32757480 | None:intergenic | 30.0% | |
TAAAAGTCTATGCCTTAACT+TGG | + | chr8_1:32757618-32757637 | Msa1189990:intron | 30.0% | |
ATGAATAAGAGACCAAGTTA+AGG | - | chr8_1:32757633-32757652 | None:intergenic | 30.0% | |
CAGTACTCATCTAAAAGTTA+AGG | - | chr8_1:32757706-32757725 | None:intergenic | 30.0% | |
! | AAGCCAAATTCTGAAAGATT+TGG | - | chr8_1:32757771-32757790 | None:intergenic | 30.0% |
AAGTAACGTTTATATAGGTG+GGG | - | chr8_1:32757811-32757830 | None:intergenic | 30.0% | |
! | AATTTGTTTGTCAAGACTCA+AGG | - | chr8_1:32757844-32757863 | None:intergenic | 30.0% |
! | ATTGTTAGGAACTTTTCTCT+TGG | + | chr8_1:32757872-32757891 | Msa1189990:intron | 30.0% |
! | ATCTTTCTCTTTTACTCTTG+AGG | + | chr8_1:32758117-32758136 | Msa1189990:intron | 30.0% |
! | TCTTTCTCTTTTACTCTTGA+GGG | + | chr8_1:32758118-32758137 | Msa1189990:intron | 30.0% |
!! | AAGTTGATAAGATTGTTAGG+TGG | - | chr8_1:32758191-32758210 | None:intergenic | 30.0% |
! | TGATAGGTTTCAGTTTTACT+TGG | + | chr8_1:32758361-32758380 | Msa1189990:intron | 30.0% |
ATTCAAACAGGAATCAAGTT+TGG | - | chr8_1:32758635-32758654 | None:intergenic | 30.0% | |
!! | GTTGATAATGTTTCCTTTCT+AGG | + | chr8_1:32758886-32758905 | Msa1189990:intron | 30.0% |
AAATTGATATGCAGGTAGTT+CGG | + | chr8_1:32759060-32759079 | Msa1189990:intron | 30.0% | |
TCAAATATATCTTCGTCTTG+AGG | - | chr8_1:32759149-32759168 | None:intergenic | 30.0% | |
TTCTTCAACATAAATGGAAC+TGG | + | chr8_1:32759249-32759268 | Msa1189990:three_prime_UTR | 30.0% | |
! | TTACATGAACATAATGGAAC+AGG | - | chr8_1:32759312-32759331 | None:intergenic | 30.0% |
GATTGTGTTGTGAAAGAAAC+AGG | - | chr8_1:32750456-32750475 | None:intergenic | 35.0% | |
!! | AAAATGAAAGTGTGGGGTTT+TGG | - | chr8_1:32750584-32750603 | None:intergenic | 35.0% |
! | GGTTTCAAAATGAAAGTGTG+GGG | - | chr8_1:32750590-32750609 | None:intergenic | 35.0% |
GTGGTTTCAAAATGAAAGTG+TGG | - | chr8_1:32750592-32750611 | None:intergenic | 35.0% | |
AAAGAGTGGAACTTCTTGAT+AGG | - | chr8_1:32750641-32750660 | None:intergenic | 35.0% | |
TTAGAAGAAGAAGCAAAGAG+AGG | - | chr8_1:32750668-32750687 | None:intergenic | 35.0% | |
AAGATTCAATGCGAACTCAA+CGG | + | chr8_1:32750695-32750714 | Msa1189990:CDS | 35.0% | |
!! | CAGTTTTACTAGTTTGGATG+TGG | + | chr8_1:32750866-32750885 | Msa1189990:intron | 35.0% |
!! | CTTTTTCTCGAATTGATGGT+AGG | + | chr8_1:32750909-32750928 | Msa1189990:intron | 35.0% |
GAGAATGCAAGACTTAAATC+AGG | + | chr8_1:32751007-32751026 | Msa1189990:intron | 35.0% | |
TAGGGAACAAAGAAACTAAC+AGG | + | chr8_1:32751073-32751092 | Msa1189990:intron | 35.0% | |
AGGGAACAAAGAAACTAACA+GGG | + | chr8_1:32751074-32751093 | Msa1189990:intron | 35.0% | |
! | TCATATTTTACCCAACAGGA+AGG | + | chr8_1:32751129-32751148 | Msa1189990:intron | 35.0% |
!! | CACACTACTTTTGTCTAAGT+AGG | + | chr8_1:32751349-32751368 | Msa1189990:intron | 35.0% |
! | TGGTAGAGTTTTTCTTTAGG+TGG | + | chr8_1:32751490-32751509 | Msa1189990:intron | 35.0% |
TCGACTTTACCAAGTAGAAA+AGG | + | chr8_1:32751706-32751725 | Msa1189990:intron | 35.0% | |
CGACTTTACCAAGTAGAAAA+GGG | + | chr8_1:32751707-32751726 | Msa1189990:intron | 35.0% | |
! | TATATTCTAGCAAAAGGCAC+TGG | + | chr8_1:32752355-32752374 | Msa1189990:intron | 35.0% |
ATAAACAGCTCTTTCGGAAA+AGG | + | chr8_1:32752395-32752414 | Msa1189990:CDS | 35.0% | |
! | ATGACAGGTTTTCTATTGTC+TGG | + | chr8_1:32752579-32752598 | Msa1189990:intron | 35.0% |
!! | TTGGCTTTAGACTTTGCTTT+AGG | + | chr8_1:32752634-32752653 | Msa1189990:CDS | 35.0% |
TCCAAAAGGAAGAATTGTAG+AGG | + | chr8_1:32752666-32752685 | Msa1189990:CDS | 35.0% | |
! | ACCTCTACAATTCTTCCTTT+TGG | - | chr8_1:32752670-32752689 | None:intergenic | 35.0% |
! | AGAAGTACAGGTAATTTGTC+TGG | + | chr8_1:32753081-32753100 | Msa1189990:intron | 35.0% |
! | TGATCCAGCATATTCTAAAG+CGG | + | chr8_1:32753240-32753259 | Msa1189990:CDS | 35.0% |
!! | AGAGTAATACCTTTGACTTG+TGG | + | chr8_1:32753323-32753342 | Msa1189990:intron | 35.0% |
GTGCCCATATTGTATTATCA+GGG | + | chr8_1:32753377-32753396 | Msa1189990:intron | 35.0% | |
GCACCCTGATAATACAATAT+GGG | - | chr8_1:32753383-32753402 | None:intergenic | 35.0% | |
AGCACCCTGATAATACAATA+TGG | - | chr8_1:32753384-32753403 | None:intergenic | 35.0% | |
!!! | TGCCTTGAAGTTTTTTGCAT+CGG | + | chr8_1:32753939-32753958 | Msa1189990:CDS | 35.0% |
AACCGATGCAAAAAACTTCA+AGG | - | chr8_1:32753944-32753963 | None:intergenic | 35.0% | |
CGACTAGAAATTCGTTCTAT+AGG | + | chr8_1:32753964-32753983 | Msa1189990:CDS | 35.0% | |
!!! | CTGCATTTTGATTTCCGTTT+AGG | + | chr8_1:32754169-32754188 | Msa1189990:intron | 35.0% |
! | GGCCTGTAAATTGGTTTATA+AGG | - | chr8_1:32754402-32754421 | None:intergenic | 35.0% |
!!! | CTAGTTTTGGTTTCCATATG+TGG | - | chr8_1:32754428-32754447 | None:intergenic | 35.0% |
!! | CTAAATGTTGCAGCTAGTTT+TGG | - | chr8_1:32754441-32754460 | None:intergenic | 35.0% |
!! | ATTATTTTGTTGCCGAGTTC+TGG | - | chr8_1:32754502-32754521 | None:intergenic | 35.0% |
AAACGCAAACCCCTATTTAT+AGG | + | chr8_1:32754655-32754674 | Msa1189990:intron | 35.0% | |
! | GGGGGTATATTATAGTATCT+TGG | - | chr8_1:32754774-32754793 | None:intergenic | 35.0% |
CTTATAAATAGTAGCAGAGG+GGG | - | chr8_1:32754792-32754811 | None:intergenic | 35.0% | |
! | ATGTCTCACAATTTTCCACA+AGG | + | chr8_1:32754926-32754945 | Msa1189990:intron | 35.0% |
! | TGTCTCACAATTTTCCACAA+GGG | + | chr8_1:32754927-32754946 | Msa1189990:intron | 35.0% |
!! | TGTTTTTACACATTCCCTTG+TGG | - | chr8_1:32754944-32754963 | None:intergenic | 35.0% |
TAGACATATACCTTCGAAAG+AGG | + | chr8_1:32755130-32755149 | Msa1189990:intron | 35.0% | |
!! | GTTGATTGATGGTTTGTTCT+AGG | - | chr8_1:32755180-32755199 | None:intergenic | 35.0% |
AACCAACTTAAAAGTGGTAG+AGG | + | chr8_1:32755283-32755302 | Msa1189990:intron | 35.0% | |
AGATGACCTCTCTCTTAATT+TGG | - | chr8_1:32755386-32755405 | None:intergenic | 35.0% | |
!! | ACTAATTCCAAGTTGGTCAT+CGG | - | chr8_1:32755479-32755498 | None:intergenic | 35.0% |
!!! | TGTCGAGATTTTGACTATCT+TGG | + | chr8_1:32755552-32755571 | Msa1189990:intron | 35.0% |
!! | TGTACTTTATCCTCTAAAGC+GGG | + | chr8_1:32755642-32755661 | Msa1189990:intron | 35.0% |
AGAAAAAAGCTGAAACAGCA+AGG | - | chr8_1:32755727-32755746 | None:intergenic | 35.0% | |
!!! | GGCATAAGCTGTTTTTTGTT+TGG | - | chr8_1:32755878-32755897 | None:intergenic | 35.0% |
CAGAACAATCTAGACTAGAA+CGG | - | chr8_1:32756015-32756034 | None:intergenic | 35.0% | |
! | TCGAATTCAGCTACTTTGTA+AGG | - | chr8_1:32756166-32756185 | None:intergenic | 35.0% |
! | TGTTTTACATCCTCCAACAT+TGG | + | chr8_1:32756437-32756456 | Msa1189990:intron | 35.0% |
! | GTTTTACATCCTCCAACATT+GGG | + | chr8_1:32756438-32756457 | Msa1189990:intron | 35.0% |
TTCTTTGCAAATCCCAATGT+TGG | - | chr8_1:32756453-32756472 | None:intergenic | 35.0% | |
! | GAGCTACTTTAAGCTTGATT+TGG | + | chr8_1:32756483-32756502 | Msa1189990:intron | 35.0% |
!! | GCAGTTTTATAATCTGTCTG+TGG | + | chr8_1:32756522-32756541 | Msa1189990:intron | 35.0% |
!! | GCAATCATTCATTGGTTCAT+AGG | + | chr8_1:32756580-32756599 | Msa1189990:intron | 35.0% |
CTAATTTGATCTCTGCTACA+TGG | - | chr8_1:32756696-32756715 | None:intergenic | 35.0% | |
TGTCTAGGTTCATTGCATAT+AGG | - | chr8_1:32756786-32756805 | None:intergenic | 35.0% | |
AGAGTGAGAAAAGATGACAA+CGG | - | chr8_1:32756923-32756942 | None:intergenic | 35.0% | |
TTGAGACACAAACAATGGAA+AGG | - | chr8_1:32756976-32756995 | None:intergenic | 35.0% | |
TTCCATTGTTTGTGTCTCAA+TGG | + | chr8_1:32756976-32756995 | Msa1189990:intron | 35.0% | |
ATTGTTTGTGTCTCAATGGT+GGG | + | chr8_1:32756980-32756999 | Msa1189990:intron | 35.0% | |
GGATGATCAACATTAAGACA+TGG | - | chr8_1:32757030-32757049 | None:intergenic | 35.0% | |
ATCCAAATCTGTCTTGAAAC+AGG | + | chr8_1:32757046-32757065 | Msa1189990:intron | 35.0% | |
AACCTGTTTCAAGACAGATT+TGG | - | chr8_1:32757051-32757070 | None:intergenic | 35.0% | |
AATCTGTCTTGAAACAGGTT+AGG | + | chr8_1:32757051-32757070 | Msa1189990:intron | 35.0% | |
CAAAACATTGCAGTACTTGA+AGG | + | chr8_1:32757086-32757105 | Msa1189990:CDS | 35.0% | |
! | CAACTTCTTCTAGAAGATGT+GGG | - | chr8_1:32757116-32757135 | None:intergenic | 35.0% |
! | TCAACTTCTTCTAGAAGATG+TGG | - | chr8_1:32757117-32757136 | None:intergenic | 35.0% |
CTAGAAGAAGTTGAAAAGGT+TGG | + | chr8_1:32757123-32757142 | Msa1189990:intron | 35.0% | |
TGTATGTTGTTGATGTACAC+AGG | + | chr8_1:32757660-32757679 | Msa1189990:intron | 35.0% | |
! | GTTGTTAAGAGCTGTTACTT+TGG | - | chr8_1:32758169-32758188 | None:intergenic | 35.0% |
!! | AAATACGAGTTTCTGGCTAT+TGG | - | chr8_1:32758243-32758262 | None:intergenic | 35.0% |
TTGCATGCTTGAATGATGAT+AGG | + | chr8_1:32758345-32758364 | Msa1189990:intron | 35.0% | |
! | ACCCTGATATTATGCTACTT+TGG | + | chr8_1:32758511-32758530 | Msa1189990:intron | 35.0% |
GCCAAAGTAGCATAATATCA+GGG | - | chr8_1:32758515-32758534 | None:intergenic | 35.0% | |
AGCCAAAGTAGCATAATATC+AGG | - | chr8_1:32758516-32758535 | None:intergenic | 35.0% | |
!! | ACTTTGAGTTTGCTGATTCT+AGG | + | chr8_1:32758576-32758595 | Msa1189990:intron | 35.0% |
CAGTCTTGAGTTATTCAAAC+AGG | - | chr8_1:32758647-32758666 | None:intergenic | 35.0% | |
! | GAGTATGCTGATTATTTGTC+AGG | - | chr8_1:32758676-32758695 | None:intergenic | 35.0% |
! | TCGTATGTGAAAAGCTTGTT+TGG | - | chr8_1:32759109-32759128 | None:intergenic | 35.0% |
!! | TGGACGTAGCTTTAATGATT+AGG | + | chr8_1:32759269-32759288 | Msa1189990:three_prime_UTR | 35.0% |
ATTAAACTGATGCCTTTGGT+CGG | + | chr8_1:32759448-32759467 | Msa1189990:three_prime_UTR | 35.0% | |
AGAAGAGTAGAAGAAAAGGG+TGG | - | chr8_1:32750611-32750630 | None:intergenic | 40.0% | |
! | ACTAGTTTGGATGTGGATTG+TGG | + | chr8_1:32750873-32750892 | Msa1189990:intron | 40.0% |
! | TTTCTCGAATTGATGGTAGG+AGG | + | chr8_1:32750912-32750931 | Msa1189990:intron | 40.0% |
ATGTGACACTTCTGTCTGTT+AGG | + | chr8_1:32751054-32751073 | Msa1189990:intron | 40.0% | |
TGTGACACTTCTGTCTGTTA+GGG | + | chr8_1:32751055-32751074 | Msa1189990:intron | 40.0% | |
GAGCAAATTTCCTTCCTGTT+GGG | - | chr8_1:32751142-32751161 | None:intergenic | 40.0% | |
AGAGCAAATTTCCTTCCTGT+TGG | - | chr8_1:32751143-32751162 | None:intergenic | 40.0% | |
GTGAAGGATAGTCGAATACT+TGG | + | chr8_1:32751567-32751586 | Msa1189990:intron | 40.0% | |
TGACCTATAGACATCATCCA+TGG | + | chr8_1:32751651-32751670 | Msa1189990:intron | 40.0% | |
TCATCCATGGCAGAAAATGT+TGG | + | chr8_1:32751664-32751683 | Msa1189990:intron | 40.0% | |
TACCAAGTAGAAAAGGGCTT+TGG | + | chr8_1:32751713-32751732 | Msa1189990:intron | 40.0% | |
CGTGAACACTAATATGCAGA+GGG | - | chr8_1:32752112-32752131 | None:intergenic | 40.0% | |
CCTCTGCATATTAGTGTTCA+CGG | + | chr8_1:32752110-32752129 | Msa1189990:intron | 40.0% | |
TACATACACTAATGCTCCAC+CGG | - | chr8_1:32752444-32752463 | None:intergenic | 40.0% | |
! | ATTAGAGCGCTTAACATGAC+AGG | + | chr8_1:32752564-32752583 | Msa1189990:intron | 40.0% |
! | AACTTTTCCCAGTGGATGTT+TGG | + | chr8_1:32752615-32752634 | Msa1189990:CDS | 40.0% |
! | TCTAAAGCCAAACATCCACT+GGG | - | chr8_1:32752625-32752644 | None:intergenic | 40.0% |
! | GCTTTAGACTTTGCTTTAGG+TGG | + | chr8_1:32752637-32752656 | Msa1189990:CDS | 40.0% |
! | TTAGACTTTGCTTTAGGTGG+TGG | + | chr8_1:32752640-32752659 | Msa1189990:CDS | 40.0% |
! | TGCTTTCTGGTCCAAATATC+TGG | - | chr8_1:32753027-32753046 | None:intergenic | 40.0% |
ATATTTGGACCAGAAAGCAG+TGG | + | chr8_1:32753028-32753047 | Msa1189990:CDS | 40.0% | |
TATTTGGACCAGAAAGCAGT+GGG | + | chr8_1:32753029-32753048 | Msa1189990:CDS | 40.0% | |
! | AATAGCATGAAGTGCTAGAG+TGG | - | chr8_1:32753059-32753078 | None:intergenic | 40.0% |
! | TCATGCTATTGCAGAAGTAC+AGG | + | chr8_1:32753069-32753088 | Msa1189990:CDS | 40.0% |
GTTTATGTCATGCAGAAGCT+AGG | + | chr8_1:32753181-32753200 | Msa1189990:intron | 40.0% | |
!! | ATATTCTAAAGCGGTAGGAG+TGG | + | chr8_1:32753249-32753268 | Msa1189990:CDS | 40.0% |
GGTGCCCATATTGTATTATC+AGG | + | chr8_1:32753376-32753395 | Msa1189990:intron | 40.0% | |
!! | TGTATTATCAGGGTGCTGTA+TGG | + | chr8_1:32753387-32753406 | Msa1189990:intron | 40.0% |
CGCAATAGATCTCATTTGTG+TGG | + | chr8_1:32753469-32753488 | Msa1189990:CDS | 40.0% | |
TGTTCACTTCAACTTCTGCT+CGG | - | chr8_1:32753517-32753536 | None:intergenic | 40.0% | |
AGAGATTGGAATGCAGCAAA+TGG | + | chr8_1:32753629-32753648 | Msa1189990:CDS | 40.0% | |
GAGATTGGAATGCAGCAAAT+GGG | + | chr8_1:32753630-32753649 | Msa1189990:CDS | 40.0% | |
! | AAGAGTACAACCAGCTTTAG+AGG | - | chr8_1:32753706-32753725 | None:intergenic | 40.0% |
TTGATTTCCGTTTAGGCCAA+AGG | + | chr8_1:32754176-32754195 | Msa1189990:intron | 40.0% | |
TTCATCTCCTTTGGCCTAAA+CGG | - | chr8_1:32754186-32754205 | None:intergenic | 40.0% | |
GCACTCTTACACGAACTTTA+AGG | - | chr8_1:32754217-32754236 | None:intergenic | 40.0% | |
! | TGTAAGAGTGCAAAAGAGCA+AGG | + | chr8_1:32754226-32754245 | Msa1189990:CDS | 40.0% |
TTTCCAGTCACAATAAACCC+AGG | - | chr8_1:32754373-32754392 | None:intergenic | 40.0% | |
! | TTTGGTTTCCATATGTGGCA+AGG | - | chr8_1:32754423-32754442 | None:intergenic | 40.0% |
AATGATACCACATGTCATGG+AGG | + | chr8_1:32754519-32754538 | Msa1189990:intron | 40.0% | |
TTCAACATAGTATCAGAGGG+TGG | - | chr8_1:32754551-32754570 | None:intergenic | 40.0% | |
! | AGAACTTCGGGAGAACTTTT+TGG | + | chr8_1:32754812-32754831 | Msa1189990:intron | 40.0% |
! | GGCATAAACCTTGTTGGTTA+TGG | - | chr8_1:32755159-32755178 | None:intergenic | 40.0% |
! | GTTCTAGGCATAAACCTTGT+TGG | - | chr8_1:32755165-32755184 | None:intergenic | 40.0% |
! | TTCTTCGGTTGGTTGATTGA+TGG | - | chr8_1:32755191-32755210 | None:intergenic | 40.0% |
!! | GACCTCTACCACTTTTAAGT+TGG | - | chr8_1:32755288-32755307 | None:intergenic | 40.0% |
ATTAAGAGAGAGGTCATCTG+TGG | + | chr8_1:32755387-32755406 | Msa1189990:intron | 40.0% | |
GACTCAGTCTTGATGTTTGT+TGG | + | chr8_1:32755421-32755440 | Msa1189990:intron | 40.0% | |
TCTCGCTACTAATTCCAAGT+TGG | - | chr8_1:32755486-32755505 | None:intergenic | 40.0% | |
TTGAGCATGTGATCAAATGC+AGG | - | chr8_1:32755593-32755612 | None:intergenic | 40.0% | |
GTCAATAAGCTGGTAAGTGT+TGG | + | chr8_1:32756205-32756224 | Msa1189990:intron | 40.0% | |
TTGTCTTAAAGAAGGGCTCT+TGG | + | chr8_1:32756325-32756344 | Msa1189990:CDS | 40.0% | |
! | GAGTTTTCAGACAATACCGA+TGG | - | chr8_1:32756365-32756384 | None:intergenic | 40.0% |
CGGTATTGTCTGAAAACTCT+TGG | + | chr8_1:32756366-32756385 | Msa1189990:intron | 40.0% | |
TTTGCAAATCCCAATGTTGG+AGG | - | chr8_1:32756450-32756469 | None:intergenic | 40.0% | |
TTGTAGTTGCGTGATATGGT+TGG | + | chr8_1:32756760-32756779 | Msa1189990:intron | 40.0% | |
CACCATTGAGACACAAACAA+TGG | - | chr8_1:32756981-32757000 | None:intergenic | 40.0% | |
CATTGTTTGTGTCTCAATGG+TGG | + | chr8_1:32756979-32756998 | Msa1189990:intron | 40.0% | |
TCTTGAAACAGGTTAGGACA+AGG | + | chr8_1:32757057-32757076 | Msa1189990:intron | 40.0% | |
GCTAATAACTTGAGCTCAGA+TGG | - | chr8_1:32757512-32757531 | None:intergenic | 40.0% | |
GCGCCAAATCTTTCAGAATT+TGG | + | chr8_1:32757765-32757784 | Msa1189990:intron | 40.0% | |
ACGTTTATATAGGTGGGGTA+CGG | - | chr8_1:32757806-32757825 | None:intergenic | 40.0% | |
TAAGAGAGAATTCCCAAACC+TGG | + | chr8_1:32757897-32757916 | Msa1189990:intron | 40.0% | |
AAGAGAGAATTCCCAAACCT+GGG | + | chr8_1:32757898-32757917 | Msa1189990:intron | 40.0% | |
ATTCAAATCTGCCCAGGTTT+GGG | - | chr8_1:32757912-32757931 | None:intergenic | 40.0% | |
TATTCAAATCTGCCCAGGTT+TGG | - | chr8_1:32757913-32757932 | None:intergenic | 40.0% | |
TGGTTTATTCAAATCTGCCC+AGG | - | chr8_1:32757918-32757937 | None:intergenic | 40.0% | |
GGGCAGATTTGAATAAACCA+AGG | + | chr8_1:32757918-32757937 | Msa1189990:intron | 40.0% | |
AGATGATAACCTTGCACACA+AGG | + | chr8_1:32758035-32758054 | Msa1189990:intron | 40.0% | |
GCTAAGCAGTTTCACCAAAA+AGG | - | chr8_1:32758438-32758457 | None:intergenic | 40.0% | |
TGGTGAAACTGCTTAGCATA+AGG | + | chr8_1:32758441-32758460 | Msa1189990:intron | 40.0% | |
AGACTCATAGTCATGGAAGT+TGG | - | chr8_1:32758704-32758723 | None:intergenic | 40.0% | |
TTTGAGCAGACTCATAGTCA+TGG | - | chr8_1:32758711-32758730 | None:intergenic | 40.0% | |
ATACTCATAGTCGTGGAAGT+TGG | - | chr8_1:32758786-32758805 | None:intergenic | 40.0% | |
TTTGAGCATACTCATAGTCG+TGG | - | chr8_1:32758793-32758812 | None:intergenic | 40.0% | |
GCATACTCTTCATCCTAGAA+AGG | - | chr8_1:32758902-32758921 | None:intergenic | 40.0% | |
GTTCGGTCTTCAATGAATGA+TGG | + | chr8_1:32759077-32759096 | Msa1189990:CDS | 40.0% | |
TTTGAAGAAAGTCTGTGACG+AGG | + | chr8_1:32759164-32759183 | Msa1189990:exon | 40.0% | |
AAGTTTGGGTGATAGATTGC+AGG | + | chr8_1:32759204-32759223 | Msa1189990:three_prime_UTR | 40.0% | |
! | CTTTGACTCGACCAGTTTAA+TGG | + | chr8_1:32759393-32759412 | Msa1189990:three_prime_UTR | 40.0% |
GGTGATTAAACTGATGCCTT+TGG | + | chr8_1:32759444-32759463 | Msa1189990:three_prime_UTR | 40.0% | |
TTAAACTGATGCCTTTGGTC+GGG | + | chr8_1:32759449-32759468 | Msa1189990:three_prime_UTR | 40.0% | |
GAAACGAGCGTCAAAATCAG+CGG | - | chr8_1:32750729-32750748 | None:intergenic | 45.0% | |
TTGACGCTCGTTTCGTTGAT+AGG | + | chr8_1:32750735-32750754 | Msa1189990:CDS | 45.0% | |
TGACGCTCGTTTCGTTGATA+GGG | + | chr8_1:32750736-32750755 | Msa1189990:CDS | 45.0% | |
!! | TGCGGTCCTTCTAAGATGAT+CGG | - | chr8_1:32751531-32751550 | None:intergenic | 45.0% |
TCATCTTAGAAGGACCGCAA+TGG | + | chr8_1:32751532-32751551 | Msa1189990:intron | 45.0% | |
ACCTTGTCAATCCTCCATTG+CGG | - | chr8_1:32751549-32751568 | None:intergenic | 45.0% | |
ATGGAGGATTGACAAGGTGA+AGG | + | chr8_1:32751551-32751570 | Msa1189990:intron | 45.0% | |
AGTCGAATACTTGGAGCAAG+AGG | + | chr8_1:32751576-32751595 | Msa1189990:intron | 45.0% | |
CTGCCATGGATGATGTCTAT+AGG | - | chr8_1:32751657-32751676 | None:intergenic | 45.0% | |
! | GACACCAACATTTTCTGCCA+TGG | - | chr8_1:32751671-32751690 | None:intergenic | 45.0% |
! | CACCAAAGCCCTTTTCTACT+TGG | - | chr8_1:32751718-32751737 | None:intergenic | 45.0% |
! | CAAGTAGAAAAGGGCTTTGG+TGG | + | chr8_1:32751716-32751735 | Msa1189990:intron | 45.0% |
CCGTGAACACTAATATGCAG+AGG | - | chr8_1:32752113-32752132 | None:intergenic | 45.0% | |
! | TGCAGTGAAACTTTTCCCAG+TGG | + | chr8_1:32752607-32752626 | Msa1189990:intron | 45.0% |
! | GTCTAAAGCCAAACATCCAC+TGG | - | chr8_1:32752626-32752645 | None:intergenic | 45.0% |
! | TTAGGTGGTGGTCTTCCAAA+AGG | + | chr8_1:32752652-32752671 | Msa1189990:CDS | 45.0% |
TATGTCATGCAGAAGCTAGG+AGG | + | chr8_1:32753184-32753203 | Msa1189990:intron | 45.0% | |
!! | CCTACCGCTTTAGAATATGC+TGG | - | chr8_1:32753247-32753266 | None:intergenic | 45.0% |
!! | CCAGCATATTCTAAAGCGGT+AGG | + | chr8_1:32753244-32753263 | Msa1189990:CDS | 45.0% |
CCAACACAACCACAAGTCAA+AGG | - | chr8_1:32753335-32753354 | None:intergenic | 45.0% | |
!! | CCTTTGACTTGTGGTTGTGT+TGG | + | chr8_1:32753332-32753351 | Msa1189990:intron | 45.0% |
GACTTGTGGTTGTGTTGGAA+TGG | + | chr8_1:32753337-32753356 | Msa1189990:intron | 45.0% | |
GCAGATCGTATGTGTAGATC+TGG | + | chr8_1:32753446-32753465 | Msa1189990:CDS | 45.0% | |
TTCACTTCAACTTCTGCTCG+GGG | - | chr8_1:32753515-32753534 | None:intergenic | 45.0% | |
GTTCACTTCAACTTCTGCTC+GGG | - | chr8_1:32753516-32753535 | None:intergenic | 45.0% | |
AATGCAGCAAATGGGATTGC+AGG | + | chr8_1:32753638-32753657 | Msa1189990:CDS | 45.0% | |
CAGACATCTTACGCAAAGCT+TGG | - | chr8_1:32753677-32753696 | None:intergenic | 45.0% | |
CAAGCTTTGCGTAAGATGTC+TGG | + | chr8_1:32753675-32753694 | Msa1189990:CDS | 45.0% | |
!! | TCTGGAAATGCCTCTAAAGC+TGG | + | chr8_1:32753693-32753712 | Msa1189990:CDS | 45.0% |
GGAAATCCAGAAGTGACAAG+TGG | + | chr8_1:32753910-32753929 | Msa1189990:CDS | 45.0% | |
AATCCAGAAGTGACAAGTGG+TGG | + | chr8_1:32753913-32753932 | Msa1189990:CDS | 45.0% | |
! | ATTCCACCACTTGTCACTTC+TGG | - | chr8_1:32753919-32753938 | None:intergenic | 45.0% |
GCCAAAGGAGATGAAGAAGT+TGG | + | chr8_1:32754191-32754210 | Msa1189990:CDS | 45.0% | |
GCCAACTTCTTCATCTCCTT+TGG | - | chr8_1:32754195-32754214 | None:intergenic | 45.0% | |
TTGTAGTAACGCATGGACCT+GGG | + | chr8_1:32754353-32754372 | Msa1189990:intron | 45.0% | |
ATGTGGCAAGGCCTGTAAAT+TGG | - | chr8_1:32754411-32754430 | None:intergenic | 45.0% | |
TTTACAGGCCTTGCCACATA+TGG | + | chr8_1:32754412-32754431 | Msa1189990:intron | 45.0% | |
! | TTCTGGAAAGTTAGGGACTG+AGG | - | chr8_1:32754485-32754504 | None:intergenic | 45.0% |
GTCCCTAACTTTCCAGAACT+CGG | + | chr8_1:32754487-32754506 | Msa1189990:intron | 45.0% | |
!! | TGCCGAGTTCTGGAAAGTTA+GGG | - | chr8_1:32754492-32754511 | None:intergenic | 45.0% |
!! | TTGCCGAGTTCTGGAAAGTT+AGG | - | chr8_1:32754493-32754512 | None:intergenic | 45.0% |
ATACCACATGTCATGGAGGA+TGG | + | chr8_1:32754523-32754542 | Msa1189990:intron | 45.0% | |
GTTATGGCTACCTCTTTCGA+AGG | - | chr8_1:32755143-32755162 | None:intergenic | 45.0% | |
AGAGGTAGCCATAACCAACA+AGG | + | chr8_1:32755148-32755167 | Msa1189990:intron | 45.0% | |
TCAGCAATGGTTTCTTCGGT+TGG | - | chr8_1:32755202-32755221 | None:intergenic | 45.0% | |
! | TATTTTGTGGTTGCTGTCGG+AGG | + | chr8_1:32755318-32755337 | Msa1189990:intron | 45.0% |
GGCTTAATCATGACGTTGGT+CGG | + | chr8_1:32755339-32755358 | Msa1189990:intron | 45.0% | |
TGACAGAACTACCAGAGACT+TGG | + | chr8_1:32755445-32755464 | Msa1189990:intron | 45.0% | |
AGTCAAAATCTCGACAGCTG+TGG | - | chr8_1:32755548-32755567 | None:intergenic | 45.0% | |
AAGGGCTCTTGGTACAGTTA+TGG | + | chr8_1:32756336-32756355 | Msa1189990:CDS | 45.0% | |
AGGGCTCTTGGTACAGTTAT+GGG | + | chr8_1:32756337-32756356 | Msa1189990:CDS | 45.0% | |
AAAGAAACACGGAAGGGAAG+AGG | - | chr8_1:32756883-32756902 | None:intergenic | 45.0% | |
!! | CACTGGTTCGACCATTAAAC+TGG | - | chr8_1:32759407-32759426 | None:intergenic | 45.0% |
AGTTCAACCGATTGCATCAC+TGG | - | chr8_1:32759424-32759443 | None:intergenic | 45.0% | |
AGTGATGCAATCGGTTGAAC+TGG | + | chr8_1:32759423-32759442 | Msa1189990:three_prime_UTR | 45.0% | |
!!! | TCTATATTTAATTATTTTTT+TGG | + | chr8_1:32751985-32752004 | Msa1189990:intron | 5.0% |
!!! | TACTTTTATTATATAATTTA+GGG | + | chr8_1:32753562-32753581 | Msa1189990:intron | 5.0% |
!! | TATATGTATATAAAAAAATA+TGG | - | chr8_1:32753604-32753623 | None:intergenic | 5.0% |
!!! | ATTTTTTTATATACATATAT+AGG | + | chr8_1:32753605-32753624 | Msa1189990:intron | 5.0% |
!!! | TTTTTTTATATACATATATA+GGG | + | chr8_1:32753606-32753625 | Msa1189990:intron | 5.0% |
CAAAGAGAGGACGCAAAGAG+TGG | - | chr8_1:32750655-32750674 | None:intergenic | 50.0% | |
GTGTGCCCGATCATCTTAGA+AGG | + | chr8_1:32751522-32751541 | Msa1189990:intron | 50.0% | |
!! | GCGGTCCTTCTAAGATGATC+GGG | - | chr8_1:32751530-32751549 | None:intergenic | 50.0% |
TCTTAGAAGGACCGCAATGG+AGG | + | chr8_1:32751535-32751554 | Msa1189990:intron | 50.0% | |
ACCGCAATGGAGGATTGACA+AGG | + | chr8_1:32751545-32751564 | Msa1189990:intron | 50.0% | |
GTTACAAGATTGGGCAGTGC+CGG | + | chr8_1:32752422-32752441 | Msa1189990:CDS | 50.0% | |
ATCGTGTGCCAACCAGATCA+TGG | + | chr8_1:32753286-32753305 | Msa1189990:CDS | 50.0% | |
CCATCTCTCCATGATCTGGT+TGG | - | chr8_1:32753297-32753316 | None:intergenic | 50.0% | |
CCAACCAGATCATGGAGAGA+TGG | + | chr8_1:32753294-32753313 | Msa1189990:CDS | 50.0% | |
AGAGCCATCTCTCCATGATC+TGG | - | chr8_1:32753301-32753320 | None:intergenic | 50.0% | |
CTTGTAGTAACGCATGGACC+TGG | + | chr8_1:32754352-32754371 | Msa1189990:intron | 50.0% | |
GGACCTGGGTTTATTGTGAC+TGG | + | chr8_1:32754367-32754386 | Msa1189990:intron | 50.0% | |
TGGAAAGTTAGGGACTGAGG+AGG | - | chr8_1:32754482-32754501 | None:intergenic | 50.0% | |
GTACCATCCTCCATGACATG+TGG | - | chr8_1:32754529-32754548 | None:intergenic | 50.0% | |
CGGAGGCTTAATCATGACGT+TGG | + | chr8_1:32755335-32755354 | Msa1189990:intron | 50.0% | |
TCATGACGTTGGTCGGATGA+TGG | + | chr8_1:32755346-32755365 | Msa1189990:intron | 50.0% | |
CATGACGTTGGTCGGATGAT+GGG | + | chr8_1:32755347-32755366 | Msa1189990:intron | 50.0% | |
GAGATGACCGATGACCAACT+TGG | + | chr8_1:32755469-32755488 | Msa1189990:intron | 50.0% | |
AATGAGGACACCCGCTTTAG+AGG | - | chr8_1:32755655-32755674 | None:intergenic | 50.0% | |
! | AGCGGGTGTCCTCATTTTAG+AGG | + | chr8_1:32755659-32755678 | Msa1189990:intron | 50.0% |
TGGAGAGGGAGTCAATAAGC+TGG | + | chr8_1:32756195-32756214 | Msa1189990:intron | 50.0% | |
GGGCTCTTGGTACAGTTATG+GGG | + | chr8_1:32756338-32756357 | Msa1189990:CDS | 50.0% | |
GGTACAGTTATGGGGACCAT+CGG | + | chr8_1:32756346-32756365 | Msa1189990:CDS | 50.0% | |
! | GTTTGTGTCTCAATGGTGGG+TGG | + | chr8_1:32756983-32757002 | Msa1189990:intron | 50.0% |
!! | AGAGTGTAGCCTTGTGTGCA+AGG | - | chr8_1:32758047-32758066 | None:intergenic | 50.0% |
! | TCTTCGTCTTGAGGAAGCAC+TGG | - | chr8_1:32759140-32759159 | None:intergenic | 50.0% |
GGTCGAACCAGTGATGCAAT+CGG | + | chr8_1:32759414-32759433 | Msa1189990:three_prime_UTR | 50.0% | |
GTGGTCTTCCCACTGCTTTC+TGG | - | chr8_1:32753040-32753059 | None:intergenic | 55.0% | |
AGAGAGAGGTCATCTGTGGC+TGG | + | chr8_1:32755391-32755410 | Msa1189990:intron | 55.0% | |
CGGTCATCTCTCCAAGTCTC+TGG | - | chr8_1:32755459-32755478 | None:intergenic | 55.0% | |
GATGCCTTTGGTCGGGTAGT+CGG | + | chr8_1:32759456-32759475 | Msa1189990:three_prime_UTR | 55.0% | |
! | ACAAGATTGGGCAGTGCCGG+TGG | + | chr8_1:32752425-32752444 | Msa1189990:CDS | 60.0% |
TCGGGGAGTGAGAGCTGAGA+CGG | - | chr8_1:32753498-32753517 | None:intergenic | 60.0% | |
CAGTCCGACTACCCGACCAA+AGG | - | chr8_1:32759463-32759482 | None:intergenic | 60.0% | |
CTTTGGTCGGGTAGTCGGAC+TGG | + | chr8_1:32759461-32759480 | Msa1189990:three_prime_UTR | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_1 | gene | 32750424 | 32759501 | 32750424 | ID=Msa1189990;Name=Msa1189990 |
chr8_1 | mRNA | 32750424 | 32759501 | 32750424 | ID=Msa1189990-mRNA-1;Parent=Msa1189990;Name=Msa1189990-mRNA-1;_AED=0.09;_eAED=0.09;_QI=136|0.90|1|1|1|1|12|320|396 |
chr8_1 | exon | 32750424 | 32750757 | 32750424 | ID=Msa1189990-mRNA-1:exon:10996;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32752365 | 32752456 | 32752365 | ID=Msa1189990-mRNA-1:exon:10997;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32752612 | 32752687 | 32752612 | ID=Msa1189990-mRNA-1:exon:10998;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32753028 | 32753090 | 32753028 | ID=Msa1189990-mRNA-1:exon:10999;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32753196 | 32753325 | 32753196 | ID=Msa1189990-mRNA-1:exon:11000;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32753444 | 32753529 | 32753444 | ID=Msa1189990-mRNA-1:exon:11001;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32753627 | 32753752 | 32753627 | ID=Msa1189990-mRNA-1:exon:11002;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32753895 | 32753999 | 32753895 | ID=Msa1189990-mRNA-1:exon:11003;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32754191 | 32754247 | 32754191 | ID=Msa1189990-mRNA-1:exon:11004;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32756291 | 32756367 | 32756291 | ID=Msa1189990-mRNA-1:exon:11005;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32757068 | 32757140 | 32757068 | ID=Msa1189990-mRNA-1:exon:11006;Parent=Msa1189990-mRNA-1 |
chr8_1 | exon | 32759074 | 32759501 | 32759074 | ID=Msa1189990-mRNA-1:exon:11007;Parent=Msa1189990-mRNA-1 |
chr8_1 | five_prime_UTR | 32750424 | 32750559 | 32750424 | ID=Msa1189990-mRNA-1:five_prime_utr;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32750560 | 32750757 | 32750560 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32752365 | 32752456 | 32752365 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32752612 | 32752687 | 32752612 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32753028 | 32753090 | 32753028 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32753196 | 32753325 | 32753196 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32753444 | 32753529 | 32753444 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32753627 | 32753752 | 32753627 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32753895 | 32753999 | 32753895 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32754191 | 32754247 | 32754191 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32756291 | 32756367 | 32756291 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32757068 | 32757140 | 32757068 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | CDS | 32759074 | 32759181 | 32759074 | ID=Msa1189990-mRNA-1:cds;Parent=Msa1189990-mRNA-1 |
chr8_1 | three_prime_UTR | 32759182 | 32759501 | 32759182 | ID=Msa1189990-mRNA-1:three_prime_utr;Parent=Msa1189990-mRNA-1 |
Gene Sequence |
Protein sequence |