AlfalfaGEDB | Msa1199620

M. sativa cultivar zhongmu-4 / Msa1199620

KEGG: K13448
GO: GO:0003674 GO:0005488 GO:0005509 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0043167 GO:0043169 GO:0044424 GO:0044464 GO:0046872
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1199620	XP_024629264.1	97.015	67	2	0	1	67	1	67	7.33e-39	142

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1199620	sp\|Q52K82\|CML21_ARATH	61.194	67	26	0	1	67	1	67	4.43e-23	94.4

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006110	Msa1199620	0.803959	2.718186e-49	-8.615850e-47
Msa0012040	Msa1199620	0.819636	1.046489e-52	-8.615850e-47
Msa0014710	Msa1199620	0.838789	2.334554e-57	-8.615850e-47
Msa0031360	Msa1199620	0.800980	1.117177e-48	-8.615850e-47
Msa0072000	Msa1199620	0.800822	1.203407e-48	-8.615850e-47
Msa0079400	Msa1199620	0.800580	1.348019e-48	-8.615850e-47
Msa0621590	Msa1199620	0.801682	8.024177e-49	-8.615850e-47
Msa0638070	Msa1199620	0.811787	5.880111e-51	-8.615850e-47
Msa0649980	Msa1199620	0.805894	1.070601e-49	-8.615850e-47
Msa0653490	Msa1199620	0.802974	4.348907e-49	-8.615850e-47
Msa0657970	Msa1199620	0.808939	2.419901e-50	-8.615850e-47
Msa0660300	Msa1199620	0.802231	6.188856e-49	-8.615850e-47
Msa0672570	Msa1199620	0.801586	8.397092e-49	-8.615850e-47
Msa0673460	Msa1199620	0.803534	3.329406e-49	-8.615850e-47
Msa0682550	Msa1199620	0.808878	2.494660e-50	-8.615850e-47
Msa0693380	Msa1199620	0.808476	3.040465e-50	-8.615850e-47
Msa0724830	Msa1199620	0.802230	6.192735e-49	-8.615850e-47
Msa0731180	Msa1199620	0.803189	3.925794e-49	-8.615850e-47
Msa0756630	Msa1199620	-0.826799	2.225356e-54	-8.615850e-47
Msa0767220	Msa1199620	0.812728	3.663771e-51	-8.615850e-47
Msa0771720	Msa1199620	0.803104	4.087990e-49	-8.615850e-47
Msa0777230	Msa1199620	0.811517	6.731092e-51	-8.615850e-47
Msa0798860	Msa1199620	0.824670	7.117646e-54	-8.615850e-47
Msa0827040	Msa1199620	0.810770	9.770965e-51	-8.615850e-47
Msa0122590	Msa1199620	0.825551	4.406820e-54	-8.615850e-47
Msa0141620	Msa1199620	0.803532	3.333229e-49	-8.615850e-47
Msa0150270	Msa1199620	0.810963	8.875338e-51	-8.615850e-47
Msa0166870	Msa1199620	0.801375	9.276798e-49	-8.615850e-47
Msa0171300	Msa1199620	0.823365	1.440771e-53	-8.615850e-47
Msa0173990	Msa1199620	0.808201	3.479852e-50	-8.615850e-47
Msa0188830	Msa1199620	0.802809	4.703908e-49	-8.615850e-47
Msa0205850	Msa1199620	0.806470	8.097533e-50	-8.615850e-47
Msa0210450	Msa1199620	0.809555	1.785569e-50	-8.615850e-47
Msa0220440	Msa1199620	0.801692	7.985069e-49	-8.615850e-47
Msa0220580	Msa1199620	0.802828	4.661667e-49	-8.615850e-47
Msa0223410	Msa1199620	-0.817914	2.575701e-52	-8.615850e-47
Msa0226890	Msa1199620	0.810741	9.911472e-51	-8.615850e-47
Msa0230770	Msa1199620	0.807080	6.019391e-50	-8.615850e-47
Msa0365490	Msa1199620	0.803497	3.388871e-49	-8.615850e-47
Msa0376590	Msa1199620	0.831762	1.388577e-55	-8.615850e-47
Msa0379640	Msa1199620	0.815034	1.136780e-51	-8.615850e-47
Msa0389810	Msa1199620	0.802442	5.599454e-49	-8.615850e-47
Msa0426330	Msa1199620	0.819931	8.962988e-53	-8.615850e-47
Msa0428930	Msa1199620	0.805028	1.626826e-49	-8.615850e-47
Msa0431670	Msa1199620	0.814422	1.553336e-51	-8.615850e-47
Msa0433640	Msa1199620	0.802038	6.782055e-49	-8.615850e-47
Msa0458440	Msa1199620	0.810630	1.047442e-50	-8.615850e-47
Msa0466390	Msa1199620	0.819056	1.419132e-52	-8.615850e-47
Msa0468130	Msa1199620	0.802495	5.459537e-49	-8.615850e-47
Msa0473240	Msa1199620	0.802223	6.211703e-49	-8.615850e-47
Msa0480320	Msa1199620	0.800340	1.508893e-48	-8.615850e-47
Msa0982270	Msa1199620	0.805363	1.384160e-49	-8.615850e-47
Msa0992490	Msa1199620	-0.811427	7.039971e-51	-8.615850e-47
Msa1030970	Msa1199620	0.816665	4.918753e-52	-8.615850e-47
Msa1037700	Msa1199620	-0.815259	1.013161e-51	-8.615850e-47
Msa1046300	Msa1199620	0.821493	3.920736e-53	-8.615850e-47
Msa1075220	Msa1199620	-0.804808	1.807926e-49	-8.615850e-47
Msa1082500	Msa1199620	0.851835	6.850155e-61	-8.615850e-47
Msa1084260	Msa1199620	0.803008	4.277857e-49	-8.615850e-47
Msa1085300	Msa1199620	0.836705	8.002562e-57	-8.615850e-47
Msa1085920	Msa1199620	0.811510	6.752089e-51	-8.615850e-47
Msa1090260	Msa1199620	0.804668	1.933930e-49	-8.615850e-47
Msa1097840	Msa1199620	0.803809	2.920490e-49	-8.615850e-47
Msa0243710	Msa1199620	0.822431	2.377183e-53	-8.615850e-47
Msa0244860	Msa1199620	0.800179	1.626996e-48	-8.615850e-47
Msa0245940	Msa1199620	0.815484	9.028436e-52	-8.615850e-47
Msa0258760	Msa1199620	0.828774	7.457919e-55	-8.615850e-47
Msa0259370	Msa1199620	0.830069	3.614093e-55	-8.615850e-47
Msa0269280	Msa1199620	0.809961	1.460405e-50	-8.615850e-47
Msa0270270	Msa1199620	0.819926	8.985799e-53	-8.615850e-47
Msa0282250	Msa1199620	0.804171	2.455196e-49	-8.615850e-47
Msa0283450	Msa1199620	0.810786	9.695052e-51	-8.615850e-47
Msa0284520	Msa1199620	0.806026	1.004306e-49	-8.615850e-47
Msa0287310	Msa1199620	0.818471	1.926180e-52	-8.615850e-47
Msa0299730	Msa1199620	0.817273	3.592918e-52	-8.615850e-47
Msa0315290	Msa1199620	0.805613	1.226774e-49	-8.615850e-47
Msa0319170	Msa1199620	0.802745	4.849567e-49	-8.615850e-47
Msa0323080	Msa1199620	0.836639	8.315642e-57	-8.615850e-47
Msa0325850	Msa1199620	0.814768	1.301891e-51	-8.615850e-47
Msa0332000	Msa1199620	0.800561	1.360075e-48	-8.615850e-47
Msa0335040	Msa1199620	0.810039	1.405262e-50	-8.615850e-47
Msa0342100	Msa1199620	0.822059	2.900955e-53	-8.615850e-47
Msa0344870	Msa1199620	0.804230	2.386233e-49	-8.615850e-47
Msa1131220	Msa1199620	0.803286	3.747573e-49	-8.615850e-47
Msa1132970	Msa1199620	0.806989	6.292485e-50	-8.615850e-47
Msa1143270	Msa1199620	0.818674	1.733019e-52	-8.615850e-47
Msa1170280	Msa1199620	0.806430	8.258741e-50	-8.615850e-47
Msa1172230	Msa1199620	0.800239	1.581966e-48	-8.615850e-47
Msa1172670	Msa1199620	0.827984	1.156332e-54	-8.615850e-47
Msa1178610	Msa1199620	0.813075	3.074602e-51	-8.615850e-47
Msa1199560	Msa1199620	0.837887	3.987751e-57	-8.615850e-47
Msa1199620	Msa1214890	0.813071	3.081335e-51	-8.615850e-47
Msa1199620	Msa1217810	0.810479	1.129202e-50	-8.615850e-47
Msa1199620	Msa1217830	0.804687	1.916610e-49	-8.615850e-47
Msa1199620	Msa1217860	0.813595	2.364392e-51	-8.615850e-47
Msa1199620	Msa1233500	0.819085	1.397269e-52	-8.615850e-47
Msa1199620	Msa1233890	0.831365	1.740229e-55	-8.615850e-47
Msa1199620	Msa1276440	0.818282	2.126038e-52	-8.615850e-47
Msa1199620	Msa1278840	0.806105	9.668665e-50	-8.615850e-47
Msa1199620	Msa1279210	0.852574	4.222111e-61	-8.615850e-47
Msa1199620	Msa1281510	0.802173	6.362069e-49	-8.615850e-47
Msa1199620	Msa1291660	0.801093	1.059531e-48	-8.615850e-47
Msa1199620	Msa1299070	0.800415	1.456966e-48	-8.615850e-47
Msa1199620	Msa1300350	-0.819165	1.340519e-52	-8.615850e-47
Msa1199620	Msa1306750	0.832035	1.189564e-55	-8.615850e-47
Msa1199620	Msa1307740	0.802149	6.434753e-49	-8.615850e-47
Msa1199620	Msa1314340	0.847144	1.392213e-59	-8.615850e-47
Msa1199620	Msa1328700	0.856587	2.908690e-62	-8.615850e-47
Msa1199620	Msa1340650	0.808709	2.710788e-50	-8.615850e-47
Msa1199620	Msa1351620	0.808542	2.942760e-50	-8.615850e-47
Msa1199620	Msa1359040	0.827005	1.986879e-54	-8.615850e-47
Msa1199620	Msa1360060	0.803908	2.784796e-49	-8.615850e-47
Msa1199620	Msa1371310	0.801392	9.199656e-49	-8.615850e-47
Msa1199620	Msa1372760	0.820983	5.139845e-53	-8.615850e-47
Msa1199620	Msa1392260	0.811623	6.382226e-51	-8.615850e-47
Msa1199620	Msa1394870	0.871682	5.674941e-67	-8.615850e-47
Msa1199620	Msa1409870	0.809371	1.955656e-50	-8.615850e-47
Msa1199620	Msa1429900	0.815177	1.056682e-51	-8.615850e-47
Msa1199620	Msa1439960	0.810989	8.759569e-51	-8.615850e-47
Msa1199620	Msa1441190	0.835592	1.533795e-56	-8.615850e-47
Msa1199620	Msa1451620	-0.805308	1.421265e-49	-8.615850e-47
Msa1199620	Msa1460020	0.802389	5.741944e-49	-8.615850e-47
Msa0484780	Msa1199620	0.843559	1.300597e-58	-8.615850e-47
Msa0516370	Msa1199620	0.814068	1.859346e-51	-8.615850e-47
Msa0532350	Msa1199620	0.810839	9.439592e-51	-8.615850e-47
Msa0536220	Msa1199620	0.808917	2.446245e-50	-8.615850e-47
Msa0844900	Msa1199620	0.800205	1.607478e-48	-8.615850e-47
Msa0869120	Msa1199620	0.810152	1.328275e-50	-8.615850e-47
Msa0876580	Msa1199620	0.807812	4.210395e-50	-8.615850e-47
Msa0881020	Msa1199620	0.802594	5.209888e-49	-8.615850e-47
Msa0896750	Msa1199620	0.803227	3.855860e-49	-8.615850e-47
Msa0908050	Msa1199620	0.819433	1.164309e-52	-8.615850e-47
Msa0910980	Msa1199620	-0.813497	2.483930e-51	-8.615850e-47
Msa0927670	Msa1199620	0.809302	2.023390e-50	-8.615850e-47
Msa0942070	Msa1199620	0.805370	1.379391e-49	-8.615850e-47
Msa0960160	Msa1199620	0.801380	9.254945e-49	-8.615850e-47
Msa0961420	Msa1199620	-0.805464	1.318472e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1199620	MtrunA17_Chr8g0369111	97.015	67	2	0	1	67	1	67	6.74e-43	142

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa1199620	AT4G26470.2	61.194	67	26	1	67	1	67	1.94e-24	94.7
Msa1199620	AT4G26470.1	61.194	67	26	1	67	1	67	4.50e-24	94.4
Msa1199620	AT4G26470.3	61.194	67	26	1	67	64	130	1.29e-23	94.4

Find 90 sgRNAs with CRISPR-Local

Find 232 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGTGAGTGTTCAAGATAATT+AGG	0.220109	8_1:-51845344	None:intergenic
CTGATTCCATTTGACATATA+AGG	0.264725	8_1:+51848545	Msa1199620:three_prime_UTR
CGAAAAGGTCCAAATTAAAA+AGG	0.311699	8_1:+51848701	Msa1199620:three_prime_UTR
AACCAAGCTTGAGGCTAAAA+TGG	0.325884	8_1:+51846232	Msa1199620:CDS
TATAGTGTTGAATGATTTCA+TGG	0.344014	8_1:-51846291	None:intergenic
GATCAGTGGTGCTGTGATTA+TGG	0.345273	8_1:-51847786	None:intergenic
AGATAATTAGGATGGTGTTT+TGG	0.349727	8_1:-51845332	None:intergenic
TTTGGCTTTGGTCTATGTTT+GGG	0.358639	8_1:-51845314	None:intergenic
TTTAAGTACCGTTGTCTTAT+CGG	0.364426	8_1:-51848763	Msa1199630:CDS
TGGTTTGGTGCAAAGCTTAT+TGG	0.372016	8_1:-51848488	Msa1199630:CDS
ACCATGTTCCTGGCAAGGTT+TGG	0.383912	8_1:-51847817	None:intergenic
CCATGTTCCTGGCAAGGTTT+GGG	0.390557	8_1:-51847816	None:intergenic
TATTGAACCTTTGTATAAAA+CGG	0.410211	8_1:-51848379	Msa1199630:intron
CAAGTATTGTACCATGTTCC+TGG	0.418119	8_1:-51847827	None:intergenic
CTTCCACCTTATATGTCAAA+TGG	0.419636	8_1:-51848551	Msa1199630:CDS
AATTAGCAGGCGGCAGTGAT+TGG	0.421207	8_1:-51848786	Msa1199630:CDS
ACGCACTTTGGTTGATTGAT+TGG	0.424555	8_1:+51846154	Msa1199620:five_prime_UTR
TTAAGTACCGTTGTCTTATC+GGG	0.426220	8_1:-51848762	Msa1199630:CDS
AGGGCCATCTTTGAGCAGTT+TGG	0.430873	8_1:+51846356	Msa1199620:CDS
GTGAATGTTTAAGAGTTAAG+TGG	0.436769	8_1:+51848452	Msa1199620:three_prime_UTR
GTATCTGCCCCGTGTGGAGG+AGG	0.438408	8_1:+51848515	Msa1199620:three_prime_UTR
TACTTCAACGGTGGAACCAC+TGG	0.457725	8_1:-51847734	None:intergenic
GCATGTTTACCAGGCTTAGC+AGG	0.463538	8_1:-51848732	Msa1199630:intron
GGATAGAAATTAGTGAAGAG+TGG	0.465265	8_1:-51845399	None:intergenic
ATATTCACCCAAACCTTGCC+AGG	0.474638	8_1:+51847809	Msa1199620:CDS
GGAGGGTCTGCATGTTTACC+AGG	0.484931	8_1:-51848741	Msa1199630:CDS
TATAAACAAATAAGACGGAA+TGG	0.494212	8_1:+51848907	Msa1199620:three_prime_UTR
CCATGCCATAGCTCTCTGTA+TGG	0.504884	8_1:-51848827	Msa1199630:CDS
ATGGGAGGTGCAATGGGAAA+GGG	0.505177	8_1:+51846179	Msa1199620:CDS
GGGGCAGATACTGCATGGTT+TGG	0.505581	8_1:-51848503	Msa1199630:CDS
AGGAAGGTTGCTGTGTGAAA+AGG	0.506588	8_1:-51847709	None:intergenic
TTGGCAATGGGAGGTGCAAT+GGG	0.506874	8_1:+51846173	Msa1199620:exon
CTGTGGTGACTTCTTGCCAT+TGG	0.510480	8_1:+51847763	Msa1199620:CDS
AATGGGAGGTGCAATGGGAA+AGG	0.510880	8_1:+51846178	Msa1199620:exon
ATTGGCAATGGGAGGTGCAA+TGG	0.512757	8_1:+51846172	Msa1199620:exon
ATAAACAAATAAGACGGAAT+GGG	0.512786	8_1:+51848908	Msa1199620:three_prime_UTR
GCTCAGATGCAAAGACGAAA+AGG	0.512979	8_1:+51848686	Msa1199620:three_prime_UTR
TTTGGTTGATTGATTGGCAA+TGG	0.515737	8_1:+51846160	Msa1199620:exon
AACGTTTCTGAGACGCACTT+TGG	0.516858	8_1:+51846142	Msa1199620:five_prime_UTR
TGCCATTCTGCAGAATTAGC+AGG	0.517948	8_1:-51848799	Msa1199630:CDS
TTGGTTGATTGATTGGCAAT+GGG	0.518035	8_1:+51846161	Msa1199620:exon
CAACTTATACATACATATCA+AGG	0.518908	8_1:+51845425	Msa1199620:five_prime_UTR
CTTGATATGTATGTATAAGT+TGG	0.520736	8_1:-51845424	None:intergenic
ATCTGAGCATAAAGATAAAG+TGG	0.527273	8_1:-51848671	Msa1199630:intron
ATGAGAGCTTCAGAAAATGC+AGG	0.530176	8_1:+51846336	Msa1199620:CDS
GTAAATTTACCTGCTAAGCC+TGG	0.534461	8_1:+51848723	Msa1199620:three_prime_UTR
CGCCTGCTAATTCTGCAGAA+TGG	0.537711	8_1:+51848797	Msa1199620:three_prime_UTR
CCTACCAAACTGCTCAAAGA+TGG	0.539084	8_1:-51846360	None:intergenic
GCAGTATCTGCCCCGTGTGG+AGG	0.542592	8_1:+51848512	Msa1199620:three_prime_UTR
ATTGTACCATGTTCCTGGCA+AGG	0.543210	8_1:-51847822	None:intergenic
GGTGGAACCACTGGCGAGGA+AGG	0.552215	8_1:-51847725	None:intergenic
CTAATTCTGCAGAATGGCAA+TGG	0.559944	8_1:+51848803	Msa1199620:three_prime_UTR
CCCAAACCTTGCCAGGAACA+TGG	0.566585	8_1:+51847816	Msa1199620:CDS
ATTCCATTTGACATATAAGG+TGG	0.570415	8_1:+51848548	Msa1199620:three_prime_UTR
GAGTCATCCCTCCTCCACAC+GGG	0.584576	8_1:-51848523	Msa1199630:CDS
ATATGTATGTATAAGTTGGT+AGG	0.586729	8_1:-51845420	None:intergenic
AGTACCGTTGTCTTATCGGG+AGG	0.590030	8_1:-51848759	Msa1199630:CDS
CCACAGTGGTTATACTTCAA+CGG	0.594258	8_1:-51847746	None:intergenic
GTACCGTTGTCTTATCGGGA+GGG	0.595062	8_1:-51848758	Msa1199630:CDS
TATCTGCCCCGTGTGGAGGA+GGG	0.595446	8_1:+51848516	Msa1199620:three_prime_UTR
GTTGATTGATTGGCAATGGG+AGG	0.595620	8_1:+51846164	Msa1199620:exon
ATGGTCCATACAGAGAGCTA+TGG	0.602279	8_1:+51848822	Msa1199620:three_prime_UTR
TGCTTCAGAGAGGTTAGAGA+AGG	0.602551	8_1:-51848588	Msa1199630:intron
AAGTGAAGTGCTATGAAGCA+AGG	0.603155	8_1:+51848424	Msa1199620:three_prime_UTR
GAAAATATAAACAAATAAGA+CGG	0.609748	8_1:+51848902	Msa1199620:three_prime_UTR
AGAGTCATCCCTCCTCCACA+CGG	0.615841	8_1:-51848524	Msa1199630:CDS
TGGTTGAAGCAATGCAACGG+AGG	0.619505	8_1:+51846252	Msa1199620:CDS
GGTTGAAGCAATGCAACGGA+GGG	0.624758	8_1:+51846253	Msa1199620:CDS
AGTGTTCAAGATAATTAGGA+TGG	0.626393	8_1:-51845340	None:intergenic
AGTCATCCCTCCTCCACACG+GGG	0.629874	8_1:-51848522	Msa1199630:CDS
AAGGTTGCTGTGTGAAAAGG+CGG	0.631265	8_1:-51847706	None:intergenic
CACACGGGGCAGATACTGCA+TGG	0.635413	8_1:-51848508	Msa1199630:CDS
CAACGGTGGAACCACTGGCG+AGG	0.636950	8_1:-51847729	None:intergenic
TGAGAGCTTCAGAAAATGCA+GGG	0.640702	8_1:+51846337	Msa1199620:CDS
CCATACAGAGAGCTATGGCA+TGG	0.645435	8_1:+51848827	Msa1199620:three_prime_UTR
CAGTGGTTATACTTCAACGG+TGG	0.647340	8_1:-51847743	None:intergenic
AAATGGTTGAAGCAATGCAA+CGG	0.650809	8_1:+51846249	Msa1199620:CDS
ACAGCAACCTTCCTCGCCAG+TGG	0.655627	8_1:+51847718	Msa1199620:CDS
GGTGGCAGAAACCAAGCTTG+AGG	0.656380	8_1:+51846223	Msa1199620:CDS
CATTCTGCAGAATTAGCAGG+CGG	0.657368	8_1:-51848796	Msa1199630:CDS
TATTTGGGTAGTCTATGTCG+TGG	0.661392	8_1:+51848646	Msa1199620:three_prime_UTR
GGTGCTGTGATTATGGCCAA+TGG	0.668377	8_1:-51847779	None:intergenic
ATGCAACGGAGGGAATGTCA+AGG	0.680566	8_1:+51846263	Msa1199620:CDS
ACAAACAGTCAGCTCTACAG+AGG	0.683554	8_1:+51848290	Msa1199620:CDS
TGGGTTCATATGCTTCAGAG+AGG	0.692784	8_1:-51848598	Msa1199630:intron
CATGCAGTATCTGCCCCGTG+TGG	0.709523	8_1:+51848509	Msa1199620:three_prime_UTR
AGACCCTCCCGATAAGACAA+CGG	0.744634	8_1:+51848755	Msa1199620:three_prime_UTR
GTTTGGGTGAATATGATCAG+TGG	0.753154	8_1:-51847800	None:intergenic
CCGTTGAAGTATAACCACTG+TGG	0.780374	8_1:+51847746	Msa1199620:CDS
ATGGCAAGAAGTCACCACAG+TGG	0.791296	8_1:-51847760	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATCAATAATATAATGAAAT+TGG	-	chr8_1:51845540-51845559	None:intergenic	10.0%
!!	GAGAATATAAAAAATAATAT+AGG	-	chr8_1:51847872-51847891	Msa1199630:three_prime_UTR	10.0%
!!	TTAAAAATCTTAATGATATT+TGG	+	chr8_1:51848630-51848649	Msa1199620:three_prime_UTR	10.0%
!!	TAAAAATCTTAATGATATTT+GGG	+	chr8_1:51848631-51848650	Msa1199620:three_prime_UTR	10.0%
!!	AATTAGATTCTTAATCATTA+GGG	+	chr8_1:51845631-51845650	Msa1199620:intron	15.0%
!!!	AATTTATGGTTTTGTAAAAT+TGG	+	chr8_1:51846391-51846410	Msa1199620:intron	15.0%
!!	CTGATATAAATATAGTTTAT+TGG	+	chr8_1:51846446-51846465	Msa1199620:intron	15.0%
!!!	TTAATAGTATTATTGGTTAT+TGG	-	chr8_1:51847911-51847930	Msa1199630:three_prime_UTR	15.0%
!!	ATGTGTATTAATAGTATTAT+TGG	-	chr8_1:51847918-51847937	Msa1199630:three_prime_UTR	15.0%
!!!	GTAAATTTACCTTTTTAATT+TGG	-	chr8_1:51848713-51848732	Msa1199630:intron	15.0%
!!!	TATTTTTTACATTTTGGTAT+AGG	-	chr8_1:51848870-51848889	Msa1199630:intron	15.0%
!!	ATACCAAAATGTAAAAAATA+TGG	+	chr8_1:51848870-51848889	Msa1199620:three_prime_UTR	15.0%
!!	GAAAATATAAACAAATAAGA+CGG	+	chr8_1:51848902-51848921	Msa1199620:three_prime_UTR	15.0%
!!	GAATTAGATTCTTAATCATT+AGG	+	chr8_1:51845630-51845649	Msa1199620:intron	20.0%
!!	ATTCCATAATAGATAGTAAA+TGG	-	chr8_1:51845944-51845963	None:intergenic	20.0%
!!!	TAAGCTATTTCATTAACAAA+AGG	+	chr8_1:51846582-51846601	Msa1199620:intron	20.0%
!!!	AAATCTCATAACTGATTTAA+TGG	+	chr8_1:51846735-51846754	Msa1199620:intron	20.0%
!!!	AATCTCATAACTGATTTAAT+GGG	+	chr8_1:51846736-51846755	Msa1199620:intron	20.0%
!!	ATAATATAGGAAAAGATTGA+TGG	-	chr8_1:51847859-51847878	Msa1199630:three_prime_UTR	20.0%
!!!	TTTAAAGCATTTGTAACTAA+CGG	+	chr8_1:51848110-51848129	Msa1199620:intron	20.0%
!!	TATTGAACCTTTGTATAAAA+CGG	-	chr8_1:51848382-51848401	Msa1199630:intron	20.0%
!!!	TAGCCATATTTTTTACATTT+TGG	-	chr8_1:51848876-51848895	Msa1199630:intron	20.0%
!!!	ATATGTATGTATAAGTTGGT+AGG	-	chr8_1:51845423-51845442	None:intergenic	25.0%
!	CTTGATATGTATGTATAAGT+TGG	-	chr8_1:51845427-51845446	None:intergenic	25.0%
!	CAACTTATACATACATATCA+AGG	+	chr8_1:51845425-51845444	Msa1199620:five_prime_UTR	25.0%
!!!	ATTATTGATTCTTTGCTCAA+CGG	+	chr8_1:51845550-51845569	Msa1199620:intron	25.0%
!!	TTTTGGATTGTCCTTTAATT+TGG	+	chr8_1:51845743-51845762	Msa1199620:intron	25.0%
!!!	TTCACTTTTCAAATGAACTT+AGG	+	chr8_1:51846040-51846059	Msa1199620:intron	25.0%
!!	TATAGTGTTGAATGATTTCA+TGG	-	chr8_1:51846294-51846313	None:intergenic	25.0%
!!!	CATCAATTTTTGGGAATTTT+AGG	-	chr8_1:51846319-51846338	None:intergenic	25.0%
!!!	GTTTTAAGAGAGTCTATAAA+AGG	+	chr8_1:51846663-51846682	Msa1199620:intron	25.0%
!!	ATCTCATAACTGATTTAATG+GGG	+	chr8_1:51846737-51846756	Msa1199620:intron	25.0%
!	GAGTAAAATTCTAATGTGAA+AGG	-	chr8_1:51847019-51847038	None:intergenic	25.0%
!	TTTATTTCCATAAACTCTCA+AGG	-	chr8_1:51847080-51847099	None:intergenic	25.0%
!	CATTGATAAACGATGATAAT+TGG	-	chr8_1:51847310-51847329	None:intergenic	25.0%
!	TCATACCATTATAGAATTCT+TGG	+	chr8_1:51847490-51847509	Msa1199620:intron	25.0%
!	CATACCATTATAGAATTCTT+GGG	+	chr8_1:51847491-51847510	Msa1199620:intron	25.0%
!!!	ACTAGTTTTGAAAAACAATG+CGG	+	chr8_1:51847656-51847675	Msa1199620:CDS	25.0%
!	ATTAATACACATTACTGAGT+CGG	+	chr8_1:51847926-51847945	Msa1199620:intron	25.0%
!	GTACTAACACATTATTAACA+TGG	+	chr8_1:51847992-51848011	Msa1199620:intron	25.0%
!	TTTGATCAAATCACCATATT+CGG	+	chr8_1:51848189-51848208	Msa1199620:intron	25.0%
!!!	AGATTTTTAACTCTACTCTT+GGG	-	chr8_1:51848620-51848639	Msa1199630:intron	25.0%
!!!	AAGATTTTTAACTCTACTCT+TGG	-	chr8_1:51848621-51848640	Msa1199630:intron	25.0%
!	GTAAAAAATATGGCTAAGAT+AGG	+	chr8_1:51848880-51848899	Msa1199620:three_prime_UTR	25.0%
!	TATAAACAAATAAGACGGAA+TGG	+	chr8_1:51848907-51848926	Msa1199620:three_prime_UTR	25.0%
!	ATAAACAAATAAGACGGAAT+GGG	+	chr8_1:51848908-51848927	Msa1199620:three_prime_UTR	25.0%
!	AGATAATTAGGATGGTGTTT+TGG	-	chr8_1:51845335-51845354	None:intergenic	30.0%
	AGTGTTCAAGATAATTAGGA+TGG	-	chr8_1:51845343-51845362	None:intergenic	30.0%
	TGTGAGTGTTCAAGATAATT+AGG	-	chr8_1:51845347-51845366	None:intergenic	30.0%
	CCTCAACTTTATTCAACAAA+TGG	-	chr8_1:51845601-51845620	None:intergenic	30.0%
!	CCATTTGTTGAATAAAGTTG+AGG	+	chr8_1:51845598-51845617	Msa1199620:intron	30.0%
	TTTGTTGAATAAAGTTGAGG+AGG	+	chr8_1:51845601-51845620	Msa1199620:intron	30.0%
	GCATGTAATTCACATAAAGT+AGG	+	chr8_1:51845710-51845729	Msa1199620:intron	30.0%
!!	AAGTAGGTCTTGTGTATTTT+TGG	+	chr8_1:51845726-51845745	Msa1199620:intron	30.0%
!!	CTTTAATTTGGCAGAAATTG+CGG	+	chr8_1:51845755-51845774	Msa1199620:intron	30.0%
	TGAGTTTCAGAAAATTACAG+CGG	+	chr8_1:51845832-51845851	Msa1199620:intron	30.0%
	AGTTTGACAGAATCAGATTT+CGG	-	chr8_1:51845895-51845914	None:intergenic	30.0%
	GCACCATTTACTATCTATTA+TGG	+	chr8_1:51845938-51845957	Msa1199620:intron	30.0%
!	TGAATCACCCAAAAAGTTTT+GGG	+	chr8_1:51846202-51846221	Msa1199620:CDS	30.0%
!	TGAAGCTCTCATCAATTTTT+GGG	-	chr8_1:51846328-51846347	None:intergenic	30.0%
	GGTAGGTTTCTACAAATTTA+TGG	+	chr8_1:51846377-51846396	Msa1199620:intron	30.0%
	ATGCTATGTTTACTCAAACA+TGG	-	chr8_1:51846529-51846548	None:intergenic	30.0%
	ATATAAGCACTTACATCACA+TGG	-	chr8_1:51846561-51846580	None:intergenic	30.0%
	AGAGTCTATAAAAGGAAACA+AGG	+	chr8_1:51846671-51846690	Msa1199620:intron	30.0%
	GAGTCTATAAAAGGAAACAA+GGG	+	chr8_1:51846672-51846691	Msa1199620:intron	30.0%
!	TCTCATAACTGATTTAATGG+GGG	+	chr8_1:51846738-51846757	Msa1199620:intron	30.0%
	TGATTACAATGGTTGAACAA+CGG	-	chr8_1:51846945-51846964	None:intergenic	30.0%
!	GATCTAACTGTTGATTACAA+TGG	-	chr8_1:51846956-51846975	None:intergenic	30.0%
	AATCCAGTTAGAGTTCAAAT+GGG	-	chr8_1:51846978-51846997	None:intergenic	30.0%
	TAATCCAGTTAGAGTTCAAA+TGG	-	chr8_1:51846979-51846998	None:intergenic	30.0%
!	ATAAACTGAAAACCAGCTTT+TGG	+	chr8_1:51847095-51847114	Msa1199620:intron	30.0%
	ATCATCGTTTATCAATGAGT+TGG	+	chr8_1:51847313-51847332	Msa1199620:intron	30.0%
	AACACCCAAGAATTCTATAA+TGG	-	chr8_1:51847498-51847517	None:intergenic	30.0%
	ACAAAACGAAGATCAAAACA+AGG	-	chr8_1:51847532-51847551	None:intergenic	30.0%
!!!	TGTTTTGATCTTCGTTTTGT+TGG	+	chr8_1:51847532-51847551	Msa1199620:intron	30.0%
!!!	GCTTTTTCATCTAAACAAAC+TGG	+	chr8_1:51848044-51848063	Msa1199620:intron	30.0%
	AACAAACTGGATGCTTATAA+AGG	+	chr8_1:51848057-51848076	Msa1199620:intron	30.0%
!	ACTTTTGTGTCATCTTCTTA+TGG	-	chr8_1:51848337-51848356	Msa1199630:intron	30.0%
!	AGTCAAACCGTTTTATACAA+AGG	+	chr8_1:51848372-51848391	Msa1199620:three_prime_UTR	30.0%
	GTGAATGTTTAAGAGTTAAG+TGG	+	chr8_1:51848452-51848471	Msa1199620:three_prime_UTR	30.0%
	CTGATTCCATTTGACATATA+AGG	+	chr8_1:51848545-51848564	Msa1199620:three_prime_UTR	30.0%
	ATTCCATTTGACATATAAGG+TGG	+	chr8_1:51848548-51848567	Msa1199620:three_prime_UTR	30.0%
	ATCTGAGCATAAAGATAAAG+TGG	-	chr8_1:51848674-51848693	Msa1199630:intron	30.0%
	CGAAAAGGTCCAAATTAAAA+AGG	+	chr8_1:51848701-51848720	Msa1199620:three_prime_UTR	30.0%
!	TTTAAGTACCGTTGTCTTAT+CGG	-	chr8_1:51848766-51848785	Msa1199630:CDS	30.0%
!!	TTTGGCTTTGGTCTATGTTT+GGG	-	chr8_1:51845317-51845336	None:intergenic	35.0%
!!!	TTTTGGCTTTGGTCTATGTT+TGG	-	chr8_1:51845318-51845337	None:intergenic	35.0%
	GGATAGAAATTAGTGAAGAG+TGG	-	chr8_1:51845402-51845421	None:intergenic	35.0%
	CGCAATTTCTGCCAAATTAA+AGG	-	chr8_1:51845757-51845776	None:intergenic	35.0%
!	AGCTTTTGCCAAAATGATGA+TGG	-	chr8_1:51845785-51845804	None:intergenic	35.0%
	TGACACTCAAGATAGATCAT+AGG	+	chr8_1:51846009-51846028	Msa1199620:intron	35.0%
	TCAAATGAACTTAGGCATTC+AGG	+	chr8_1:51846048-51846067	Msa1199620:intron	35.0%
	TCGCTAATTACGCAAAGATA+TGG	-	chr8_1:51846079-51846098	None:intergenic	35.0%
!	ATCAATTGTTGTTGCTTACG+AGG	+	chr8_1:51846110-51846129	Msa1199620:intron	35.0%
	TTTGGTTGATTGATTGGCAA+TGG	+	chr8_1:51846160-51846179	Msa1199620:exon	35.0%
	TTGGTTGATTGATTGGCAAT+GGG	+	chr8_1:51846161-51846180	Msa1199620:exon	35.0%
!	GTGAATCACCCAAAAAGTTT+TGG	+	chr8_1:51846201-51846220	Msa1199620:CDS	35.0%
	AAATGGTTGAAGCAATGCAA+CGG	+	chr8_1:51846249-51846268	Msa1199620:CDS	35.0%
!	CTGAAGCTCTCATCAATTTT+TGG	-	chr8_1:51846329-51846348	None:intergenic	35.0%
	TTGGCCTGAATTTATACACT+AGG	+	chr8_1:51846465-51846484	Msa1199620:intron	35.0%
	TGGCCTGAATTTATACACTA+GGG	+	chr8_1:51846466-51846485	Msa1199620:intron	35.0%
	TGACCCTAGTGTATAAATTC+AGG	-	chr8_1:51846472-51846491	None:intergenic	35.0%
!!	GCTACTTCTTGCTTTTACTT+TGG	-	chr8_1:51846497-51846516	None:intergenic	35.0%
	TAGAGACGAAAAGTTCAGTA+TGG	+	chr8_1:51846819-51846838	Msa1199620:intron	35.0%
	AGAGACGAAAAGTTCAGTAT+GGG	+	chr8_1:51846820-51846839	Msa1199620:intron	35.0%
	CAGAAACATAAAGATAGCCT+AGG	-	chr8_1:51846910-51846929	None:intergenic	35.0%
	ATAAACTCTCAAGGATAGCT+TGG	-	chr8_1:51847071-51847090	None:intergenic	35.0%
	AAGCTATCCTTGAGAGTTTA+TGG	+	chr8_1:51847070-51847089	Msa1199620:intron	35.0%
	ACATTGTTTGAGAGAGCTTA+TGG	-	chr8_1:51847139-51847158	None:intergenic	35.0%
	CAAACAATGTCACAAACAAG+TGG	+	chr8_1:51847149-51847168	Msa1199620:intron	35.0%
!	TTTTCCTCGATCTAAACAGT+TGG	-	chr8_1:51847448-51847467	None:intergenic	35.0%
	ATTTCTGATCCATCAACTTG+TGG	+	chr8_1:51847954-51847973	Msa1199620:intron	35.0%
!	AGACTAAATCCACAAGTTGA+TGG	-	chr8_1:51847966-51847985	Msa1199630:three_prime_UTR	35.0%
	AGTCTAAACTCAACCGAATA+TGG	-	chr8_1:51848205-51848224	Msa1199630:CDS	35.0%
	CTTCCACCTTATATGTCAAA+TGG	-	chr8_1:51848554-51848573	Msa1199630:CDS	35.0%
!	TTAAGTACCGTTGTCTTATC+GGG	-	chr8_1:51848765-51848784	Msa1199630:CDS	35.0%
!!!	TTAGGATGGTGTTTTGGCTT+TGG	-	chr8_1:51845329-51845348	None:intergenic	40.0%
	AGCTACACTTAGTGCATGTT+TGG	+	chr8_1:51845801-51845820	Msa1199620:intron	40.0%
	TCACCGTGAATCCAAATCAA+GGG	+	chr8_1:51845914-51845933	Msa1199620:intron	40.0%
	ACGCACTTTGGTTGATTGAT+TGG	+	chr8_1:51846154-51846173	Msa1199620:five_prime_UTR	40.0%
!!!	ATCACCCAAAAAGTTTTGGG+TGG	+	chr8_1:51846205-51846224	Msa1199620:CDS	40.0%
!	TCTGCCACCCAAAACTTTTT+GGG	-	chr8_1:51846212-51846231	None:intergenic	40.0%
!	TTCTGCCACCCAAAACTTTT+TGG	-	chr8_1:51846213-51846232	None:intergenic	40.0%
	AACCAAGCTTGAGGCTAAAA+TGG	+	chr8_1:51846232-51846251	Msa1199620:CDS	40.0%
!!	AACCATTTTAGCCTCAAGCT+TGG	-	chr8_1:51846237-51846256	None:intergenic	40.0%
	ATGAGAGCTTCAGAAAATGC+AGG	+	chr8_1:51846336-51846355	Msa1199620:CDS	40.0%
	TGAGAGCTTCAGAAAATGCA+GGG	+	chr8_1:51846337-51846356	Msa1199620:CDS	40.0%
!	CATAACTGATTTAATGGGGG+AGG	+	chr8_1:51846741-51846760	Msa1199620:intron	40.0%
	GAGACGAAAAGTTCAGTATG+GGG	+	chr8_1:51846821-51846840	Msa1199620:intron	40.0%
	AGACGAAAAGTTCAGTATGG+GGG	+	chr8_1:51846822-51846841	Msa1199620:intron	40.0%
	GATCCCATTTGAACTCTAAC+TGG	+	chr8_1:51846972-51846991	Msa1199620:intron	40.0%
!	GGTCTTCTTCATCTTTTCTC+TGG	+	chr8_1:51847334-51847353	Msa1199620:intron	40.0%
!!!	TCTTTTCTCTGGAACTCGTT+TGG	+	chr8_1:51847345-51847364	Msa1199620:intron	40.0%
	TGTACCAACTGTTTAGATCG+AGG	+	chr8_1:51847441-51847460	Msa1199620:intron	40.0%
	CCACAGTGGTTATACTTCAA+CGG	-	chr8_1:51847749-51847768	None:intergenic	40.0%
	GTTTGGGTGAATATGATCAG+TGG	-	chr8_1:51847803-51847822	None:intergenic	40.0%
!	CAAGTATTGTACCATGTTCC+TGG	-	chr8_1:51847830-51847849	None:intergenic	40.0%
	CAGGAACATGGTACAATACT+TGG	+	chr8_1:51847828-51847847	Msa1199620:intron	40.0%
	GGTTGAGTTTAGACTTCTGA+CGG	+	chr8_1:51848210-51848229	Msa1199620:intron	40.0%
!	TTGCTTCTTTGTTATGCACC+AGG	+	chr8_1:51848235-51848254	Msa1199620:intron	40.0%
!	TGCTTCTTTGTTATGCACCA+GGG	+	chr8_1:51848236-51848255	Msa1199620:intron	40.0%
!	AAGTGAAGTGCTATGAAGCA+AGG	+	chr8_1:51848424-51848443	Msa1199620:three_prime_UTR	40.0%
!!	TGGTTTGGTGCAAAGCTTAT+TGG	-	chr8_1:51848491-51848510	Msa1199630:CDS	40.0%
	TATTTGGGTAGTCTATGTCG+TGG	+	chr8_1:51848646-51848665	Msa1199620:three_prime_UTR	40.0%
	GTAAATTTACCTGCTAAGCC+TGG	+	chr8_1:51848723-51848742	Msa1199620:three_prime_UTR	40.0%
	CTAATTCTGCAGAATGGCAA+TGG	+	chr8_1:51848803-51848822	Msa1199620:three_prime_UTR	40.0%
!	GCGGTGTACCATCATCATTT+TGG	+	chr8_1:51845774-51845793	Msa1199620:intron	45.0%
	TCAGAAAATTACAGCGGCAG+TGG	+	chr8_1:51845838-51845857	Msa1199620:intron	45.0%
	CTCACCGTGAATCCAAATCA+AGG	+	chr8_1:51845913-51845932	Msa1199620:intron	45.0%
	CACCGTGAATCCAAATCAAG+GGG	+	chr8_1:51845915-51845934	Msa1199620:intron	45.0%
	ACCGTGAATCCAAATCAAGG+GGG	+	chr8_1:51845916-51845935	Msa1199620:intron	45.0%
	TAAATGGTGCCCCCTTGATT+TGG	-	chr8_1:51845928-51845947	None:intergenic	45.0%
!	GTTGTTGCTTACGAGGTACT+AGG	+	chr8_1:51846117-51846136	Msa1199620:intron	45.0%
!!	AACGTTTCTGAGACGCACTT+TGG	+	chr8_1:51846142-51846161	Msa1199620:five_prime_UTR	45.0%
	GTTGATTGATTGGCAATGGG+AGG	+	chr8_1:51846164-51846183	Msa1199620:exon	45.0%
	CCTACCAAACTGCTCAAAGA+TGG	-	chr8_1:51846363-51846382	None:intergenic	45.0%
	CCATCTTTGAGCAGTTTGGT+AGG	+	chr8_1:51846360-51846379	Msa1199620:intron	45.0%
!!	GATTAGTGGACTGTTGGCAT+AGG	+	chr8_1:51846767-51846786	Msa1199620:intron	45.0%
	TTGGCATAGGAGAGAGATTG+TGG	+	chr8_1:51846780-51846799	Msa1199620:intron	45.0%
	GAGAGAGATTGTGGATCTGA+TGG	+	chr8_1:51846789-51846808	Msa1199620:intron	45.0%
	GACGAAAAGTTCAGTATGGG+GGG	+	chr8_1:51846823-51846842	Msa1199620:intron	45.0%
	AAAAGTTCAGTATGGGGGGT+AGG	+	chr8_1:51846827-51846846	Msa1199620:intron	45.0%
	TAGTCTCCATCTCACTACAC+TGG	+	chr8_1:51846861-51846880	Msa1199620:intron	45.0%
	AGTCTCCATCTCACTACACT+GGG	+	chr8_1:51846862-51846881	Msa1199620:intron	45.0%
	AATCTCCCAGTGTAGTGAGA+TGG	-	chr8_1:51846870-51846889	None:intergenic	45.0%
	TCACTACACTGGGAGATTCT+AGG	+	chr8_1:51846872-51846891	Msa1199620:intron	45.0%
	ACTCTCAAGGATAGCTTGGT+AGG	-	chr8_1:51847067-51847086	None:intergenic	45.0%
	CTTACGACATGTCCAAAAGC+TGG	-	chr8_1:51847110-51847129	None:intergenic	45.0%
	CTAGATCATGAAACACTGCG+CGG	+	chr8_1:51847214-51847233	Msa1199620:intron	45.0%
!	CTGGAACTCGTTTGGTTTCA+TGG	+	chr8_1:51847353-51847372	Msa1199620:intron	45.0%
	AAGGTTGCTGTGTGAAAAGG+CGG	-	chr8_1:51847709-51847728	None:intergenic	45.0%
	AGGAAGGTTGCTGTGTGAAA+AGG	-	chr8_1:51847712-51847731	None:intergenic	45.0%
	CAGTGGTTATACTTCAACGG+TGG	-	chr8_1:51847746-51847765	None:intergenic	45.0%
	CCGTTGAAGTATAACCACTG+TGG	+	chr8_1:51847746-51847765	Msa1199620:CDS	45.0%
!!	GATCAGTGGTGCTGTGATTA+TGG	-	chr8_1:51847789-51847808	None:intergenic	45.0%
	ATATTCACCCAAACCTTGCC+AGG	+	chr8_1:51847809-51847828	Msa1199620:CDS	45.0%
	ATTGTACCATGTTCCTGGCA+AGG	-	chr8_1:51847825-51847844	None:intergenic	45.0%
!	GCTTCTTTGTTATGCACCAG+GGG	+	chr8_1:51848237-51848256	Msa1199620:intron	45.0%
!	CTTCTTTGTTATGCACCAGG+GGG	+	chr8_1:51848238-51848257	Msa1199620:intron	45.0%
	ACAAACAGTCAGCTCTACAG+AGG	+	chr8_1:51848290-51848309	Msa1199620:CDS	45.0%
	TGCTTCAGAGAGGTTAGAGA+AGG	-	chr8_1:51848591-51848610	Msa1199630:intron	45.0%
	TGGGTTCATATGCTTCAGAG+AGG	-	chr8_1:51848601-51848620	Msa1199630:intron	45.0%
	GCTCAGATGCAAAGACGAAA+AGG	+	chr8_1:51848686-51848705	Msa1199620:three_prime_UTR	45.0%
	CATTCTGCAGAATTAGCAGG+CGG	-	chr8_1:51848799-51848818	Msa1199630:CDS	45.0%
	TGCCATTCTGCAGAATTAGC+AGG	-	chr8_1:51848802-51848821	Msa1199630:CDS	45.0%
	ATGGTCCATACAGAGAGCTA+TGG	+	chr8_1:51848822-51848841	Msa1199620:three_prime_UTR	45.0%
!!	AAATAAATAAATAAATGAAA+TGG	-	chr8_1:51845473-51845492	None:intergenic	5.0%
!!!	TATATTATTTTTTATATTCT+CGG	+	chr8_1:51847871-51847890	Msa1199620:intron	5.0%
!!	GCCCCCTTGATTTGGATTCA+CGG	-	chr8_1:51845920-51845939	None:intergenic	50.0%
!	ATTGGCAATGGGAGGTGCAA+TGG	+	chr8_1:51846172-51846191	Msa1199620:exon	50.0%
!	TTGGCAATGGGAGGTGCAAT+GGG	+	chr8_1:51846173-51846192	Msa1199620:exon	50.0%
!	AATGGGAGGTGCAATGGGAA+AGG	+	chr8_1:51846178-51846197	Msa1199620:exon	50.0%
!	ATGGGAGGTGCAATGGGAAA+GGG	+	chr8_1:51846179-51846198	Msa1199620:CDS	50.0%
	TGGTTGAAGCAATGCAACGG+AGG	+	chr8_1:51846252-51846271	Msa1199620:CDS	50.0%
	GGTTGAAGCAATGCAACGGA+GGG	+	chr8_1:51846253-51846272	Msa1199620:CDS	50.0%
	ATGCAACGGAGGGAATGTCA+AGG	+	chr8_1:51846263-51846282	Msa1199620:CDS	50.0%
	AGGGCCATCTTTGAGCAGTT+TGG	+	chr8_1:51846356-51846375	Msa1199620:CDS	50.0%
!!	AGGCGTGATTAGTGGACTGT+TGG	+	chr8_1:51846761-51846780	Msa1199620:intron	50.0%
	CTAGGTGTCTCGAATCACCT+AGG	+	chr8_1:51846890-51846909	Msa1199620:intron	50.0%
	CGCGCAGTGTTTCATGATCT+AGG	-	chr8_1:51847216-51847235	None:intergenic	50.0%
	TACTTCAACGGTGGAACCAC+TGG	-	chr8_1:51847737-51847756	None:intergenic	50.0%
	ATGGCAAGAAGTCACCACAG+TGG	-	chr8_1:51847763-51847782	None:intergenic	50.0%
	CTGTGGTGACTTCTTGCCAT+TGG	+	chr8_1:51847763-51847782	Msa1199620:CDS	50.0%
!	GGTGCTGTGATTATGGCCAA+TGG	-	chr8_1:51847782-51847801	None:intergenic	50.0%
	CCATGTTCCTGGCAAGGTTT+GGG	-	chr8_1:51847819-51847838	None:intergenic	50.0%
	ACCATGTTCCTGGCAAGGTT+TGG	-	chr8_1:51847820-51847839	None:intergenic	50.0%
	GCATGTTTACCAGGCTTAGC+AGG	-	chr8_1:51848735-51848754	Msa1199630:CDS	50.0%
	AGACCCTCCCGATAAGACAA+CGG	+	chr8_1:51848755-51848774	Msa1199620:three_prime_UTR	50.0%
	GTACCGTTGTCTTATCGGGA+GGG	-	chr8_1:51848761-51848780	Msa1199630:CDS	50.0%
	AGTACCGTTGTCTTATCGGG+AGG	-	chr8_1:51848762-51848781	Msa1199630:CDS	50.0%
	AATTAGCAGGCGGCAGTGAT+TGG	-	chr8_1:51848789-51848808	Msa1199630:CDS	50.0%
	CGCCTGCTAATTCTGCAGAA+TGG	+	chr8_1:51848797-51848816	Msa1199620:three_prime_UTR	50.0%
	CCATGCCATAGCTCTCTGTA+TGG	-	chr8_1:51848830-51848849	Msa1199630:CDS	50.0%
	CCATACAGAGAGCTATGGCA+TGG	+	chr8_1:51848827-51848846	Msa1199620:three_prime_UTR	50.0%
	GGTGGCAGAAACCAAGCTTG+AGG	+	chr8_1:51846223-51846242	Msa1199620:CDS	55.0%
!	AATGGGGGAGGCGTGATTAG+TGG	+	chr8_1:51846753-51846772	Msa1199620:intron	55.0%
	CCCAAACCTTGCCAGGAACA+TGG	+	chr8_1:51847816-51847835	Msa1199620:CDS	55.0%
!	TTTGTTATGCACCAGGGGGC+AGG	+	chr8_1:51848242-51848261	Msa1199620:intron	55.0%
	TGAGTACATTTCCTGCCCCC+TGG	-	chr8_1:51848256-51848275	Msa1199630:CDS	55.0%
	GGGGCAGATACTGCATGGTT+TGG	-	chr8_1:51848506-51848525	Msa1199630:CDS	55.0%
	AGAGTCATCCCTCCTCCACA+CGG	-	chr8_1:51848527-51848546	Msa1199630:CDS	55.0%
	GGAGGGTCTGCATGTTTACC+AGG	-	chr8_1:51848744-51848763	Msa1199630:CDS	55.0%
	ACAGCAACCTTCCTCGCCAG+TGG	+	chr8_1:51847718-51847737	Msa1199620:CDS	60.0%
	CACACGGGGCAGATACTGCA+TGG	-	chr8_1:51848511-51848530	Msa1199630:CDS	60.0%
	CATGCAGTATCTGCCCCGTG+TGG	+	chr8_1:51848509-51848528	Msa1199620:three_prime_UTR	60.0%
	TATCTGCCCCGTGTGGAGGA+GGG	+	chr8_1:51848516-51848535	Msa1199620:three_prime_UTR	60.0%
	AGTCATCCCTCCTCCACACG+GGG	-	chr8_1:51848525-51848544	Msa1199630:CDS	60.0%
	GAGTCATCCCTCCTCCACAC+GGG	-	chr8_1:51848526-51848545	Msa1199630:CDS	60.0%
	GGTGGAACCACTGGCGAGGA+AGG	-	chr8_1:51847728-51847747	None:intergenic	65.0%
	CAACGGTGGAACCACTGGCG+AGG	-	chr8_1:51847732-51847751	None:intergenic	65.0%
	GCAGTATCTGCCCCGTGTGG+AGG	+	chr8_1:51848512-51848531	Msa1199620:three_prime_UTR	65.0%
	GTATCTGCCCCGTGTGGAGG+AGG	+	chr8_1:51848515-51848534	Msa1199620:three_prime_UTR	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_1	gene	51845310	51848971	51845310	ID=Msa1199620;Name=Msa1199620
chr8_1	mRNA	51845310	51848971	51845310	ID=Msa1199620-mRNA-1;Parent=Msa1199620;Name=Msa1199620-mRNA-1;_AED=0.35;_eAED=0.35;_QI=177\|0.33\|0.75\|0.75\|0\|0\|4\|624\|168
chr8_1	exon	51845310	51845446	51845310	ID=Msa1199620-mRNA-1:exon:16381;Parent=Msa1199620-mRNA-1
chr8_1	exon	51846139	51846377	51846139	ID=Msa1199620-mRNA-1:exon:16382;Parent=Msa1199620-mRNA-1
chr8_1	exon	51847621	51847837	51847621	ID=Msa1199620-mRNA-1:exon:16383;Parent=Msa1199620-mRNA-1
chr8_1	exon	51848257	51848971	51848257	ID=Msa1199620-mRNA-1:exon:16384;Parent=Msa1199620-mRNA-1
chr8_1	five_prime_UTR	51845310	51845446	51845310	ID=Msa1199620-mRNA-1:five_prime_utr;Parent=Msa1199620-mRNA-1
chr8_1	five_prime_UTR	51846139	51846178	51846139	ID=Msa1199620-mRNA-1:five_prime_utr;Parent=Msa1199620-mRNA-1
chr8_1	CDS	51846179	51846377	51846179	ID=Msa1199620-mRNA-1:cds;Parent=Msa1199620-mRNA-1
chr8_1	CDS	51847621	51847837	51847621	ID=Msa1199620-mRNA-1:cds;Parent=Msa1199620-mRNA-1
chr8_1	CDS	51848257	51848347	51848257	ID=Msa1199620-mRNA-1:cds;Parent=Msa1199620-mRNA-1
chr8_1	three_prime_UTR	51848348	51848971	51848348	ID=Msa1199620-mRNA-1:three_prime_utr;Parent=Msa1199620-mRNA-1

Gene Sequence

>Msa1199620

ATGGGAGGTGCAATGGGAAAGGGTGAATCACCCAAAAAGTTTTGGGTGGCAGAAACCAAGCTTGAGGCTAAAATGGTTGAAGCAATGCAACGGAGGGAATGTCAAGGATGTTCCATGAAATCATTCAACACTATAATCCTAAAATTCCCAAAAATTGATGAGAGCTTCAGAAAATGCAGGGCCATCTTTGAGCAGTTTGAGTTTAAAATTTTGAAGCATTACGTTGAAATTGCTACTAGTTTTGAAAAACAATGCGGTTATCACTCGTTTTCTACGAAGCATCTCCGCCTTTTCACACAGCAACCTTCCTCGCCAGTGGTTCCACCGTTGAAGTATAACCACTGTGGTGACTTCTTGCCATTGGCCATAATCACAGCACCACTGATCATATTCACCCAAACCTTGCCAGGAACATGGGGGCAGGAAATGTACTCAACTGAACATAATTCACAAACAGTCAGCTCTACAGAGGCAAATATTATTTATCATGTAACCATAAGAAGATGA

Protein sequence

>Msa1199620

MGGAMGKGESPKKFWVAETKLEAKMVEAMQRRECQGCSMKSFNTIILKFPKIDESFRKCRAIFEQFEFKILKHYVEIATSFEKQCGYHSFSTKHLRLFTQQPSSPVVPPLKYNHCGDFLPLAIITAPLIIFTQTLPGTWGQEMYSTEHNSQTVSSTEANIIYHVTIRR*