Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183590 | PNY10494.1 | 77.358 | 53 | 11 | 1 | 1 | 53 | 1 | 52 | 1.03e-15 | 75.5 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183590 | A0A2K3P5D6 | 77.358 | 53 | 11 | 1 | 1 | 53 | 1 | 52 | 4.91e-16 | 75.5 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000490 | Msa0183590 | -0.826158 | 3.163505e-54 | -8.615850e-47 |
| Msa0044210 | Msa0183590 | 0.932362 | 9.545934e-95 | -8.615850e-47 |
| Msa0050430 | Msa0183590 | 0.824154 | 9.413075e-54 | -8.615850e-47 |
| Msa0078660 | Msa0183590 | 0.823660 | 1.229300e-53 | -8.615850e-47 |
| Msa0095380 | Msa0183590 | 0.831805 | 1.355386e-55 | -8.615850e-47 |
| Msa0105420 | Msa0183590 | 0.829396 | 5.271200e-55 | -8.615850e-47 |
| Msa0113160 | Msa0183590 | 0.808169 | 3.534934e-50 | -8.615850e-47 |
| Msa0114540 | Msa0183590 | -0.805534 | 1.274303e-49 | -8.615850e-47 |
| Msa0126380 | Msa0183590 | 0.817299 | 3.544329e-52 | -8.615850e-47 |
| Msa0137040 | Msa0183590 | 0.808145 | 3.575663e-50 | -8.615850e-47 |
| Msa0168100 | Msa0183590 | 0.800875 | 1.173778e-48 | -8.615850e-47 |
| Msa0170140 | Msa0183590 | 0.803330 | 3.669926e-49 | -8.615850e-47 |
| Msa0172350 | Msa0183590 | 0.813550 | 2.418751e-51 | -8.615850e-47 |
| Msa0183590 | Msa0183600 | 0.936449 | 1.706854e-97 | -8.615850e-47 |
| Msa0183590 | Msa0188630 | 0.818296 | 2.110805e-52 | -8.615850e-47 |
| Msa0183590 | Msa0192060 | 0.823110 | 1.652710e-53 | -8.615850e-47 |
| Msa0183590 | Msa0193890 | 0.805944 | 1.044992e-49 | -8.615850e-47 |
| Msa0183590 | Msa0208630 | 0.807784 | 4.267954e-50 | -8.615850e-47 |
| Msa0183590 | Msa0223290 | 0.804927 | 1.707704e-49 | -8.615850e-47 |
| Msa0183590 | Msa0224730 | 0.815703 | 8.068510e-52 | -8.615850e-47 |
| Msa0183590 | Msa0226890 | 0.819062 | 1.414364e-52 | -8.615850e-47 |
| Msa0183590 | Msa0230770 | 0.814876 | 1.231997e-51 | -8.615850e-47 |
| Msa0183590 | Msa0235890 | 0.807363 | 5.242573e-50 | -8.615850e-47 |
| Msa0183590 | Msa0239510 | 0.807204 | 5.666412e-50 | -8.615850e-47 |
| Msa0183590 | Msa0241640 | 0.800297 | 1.539444e-48 | -8.615850e-47 |
| Msa0183590 | Msa0259560 | 0.800014 | 1.757786e-48 | -8.615850e-47 |
| Msa0183590 | Msa0267760 | 0.808464 | 3.057802e-50 | -8.615850e-47 |
| Msa0183590 | Msa0270270 | 0.822065 | 2.890861e-53 | -8.615850e-47 |
| Msa0183590 | Msa0287310 | 0.801771 | 7.692888e-49 | -8.615850e-47 |
| Msa0183590 | Msa0296760 | 0.818490 | 1.907739e-52 | -8.615850e-47 |
| Msa0183590 | Msa0302650 | 0.800054 | 1.725075e-48 | -8.615850e-47 |
| Msa0183590 | Msa0315240 | 0.811782 | 5.893376e-51 | -8.615850e-47 |
| Msa0183590 | Msa0320100 | 0.806810 | 6.863925e-50 | -8.615850e-47 |
| Msa0183590 | Msa0328210 | 0.819253 | 1.279728e-52 | -8.615850e-47 |
| Msa0183590 | Msa0335040 | 0.807508 | 4.885559e-50 | -8.615850e-47 |
| Msa0183590 | Msa0342100 | 0.802159 | 6.403990e-49 | -8.615850e-47 |
| Msa0183590 | Msa0344830 | 0.823727 | 1.185319e-53 | -8.615850e-47 |
| Msa0183590 | Msa0344870 | 0.813376 | 2.641720e-51 | -8.615850e-47 |
| Msa0183590 | Msa0347360 | 0.818901 | 1.538788e-52 | -8.615850e-47 |
| Msa0183590 | Msa0350990 | 0.801436 | 9.012298e-49 | -8.615850e-47 |
| Msa0183590 | Msa0351030 | 0.800121 | 1.672092e-48 | -8.615850e-47 |
| Msa0183590 | Msa0351080 | 0.800644 | 1.308307e-48 | -8.615850e-47 |
| Msa0183590 | Msa0356890 | -0.803902 | 2.792746e-49 | -8.615850e-47 |
| Msa0183590 | Msa0369570 | 0.815399 | 9.430906e-52 | -8.615850e-47 |
| Msa0183590 | Msa0377530 | 0.839399 | 1.621819e-57 | -8.615850e-47 |
| Msa0183590 | Msa0380040 | 0.828668 | 7.909140e-55 | -8.615850e-47 |
| Msa0183590 | Msa0382870 | 0.801321 | 9.516383e-49 | -8.615850e-47 |
| Msa0183590 | Msa0392070 | 0.831665 | 1.467587e-55 | -8.615850e-47 |
| Msa0183590 | Msa0393680 | 0.822183 | 2.714826e-53 | -8.615850e-47 |
| Msa0183590 | Msa0393950 | 0.825081 | 5.692599e-54 | -8.615850e-47 |
| Msa0183590 | Msa0398640 | 0.831247 | 1.860465e-55 | -8.615850e-47 |
| Msa0183590 | Msa0426330 | 0.822152 | 2.760540e-53 | -8.615850e-47 |
| Msa0183590 | Msa0429290 | 0.822027 | 2.949872e-53 | -8.615850e-47 |
| Msa0183590 | Msa0437710 | 0.804059 | 2.590033e-49 | -8.615850e-47 |
| Msa0183590 | Msa0442850 | 0.816626 | 5.018677e-52 | -8.615850e-47 |
| Msa0183590 | Msa0469910 | -0.816355 | 5.772830e-52 | -8.615850e-47 |
| Msa0183590 | Msa0473240 | 0.838875 | 2.216768e-57 | -8.615850e-47 |
| Msa0183590 | Msa0475580 | 0.822831 | 1.918720e-53 | -8.615850e-47 |
| Msa0183590 | Msa0480320 | 0.833087 | 6.524184e-56 | -8.615850e-47 |
| Msa0183590 | Msa0490350 | 0.805082 | 1.584670e-49 | -8.615850e-47 |
| Msa0183590 | Msa0500720 | 0.801232 | 9.921064e-49 | -8.615850e-47 |
| Msa0183590 | Msa0505060 | 0.824668 | 7.126063e-54 | -8.615850e-47 |
| Msa0183590 | Msa0506890 | 0.809744 | 1.626125e-50 | -8.615850e-47 |
| Msa0183590 | Msa0508200 | 0.807178 | 5.739218e-50 | -8.615850e-47 |
| Msa0183590 | Msa0509970 | 0.803350 | 3.635306e-49 | -8.615850e-47 |
| Msa0183590 | Msa0514000 | 0.801447 | 8.963753e-49 | -8.615850e-47 |
| Msa0183590 | Msa0516370 | 0.807571 | 4.735902e-50 | -8.615850e-47 |
| Msa0183590 | Msa0517490 | 0.850096 | 2.117504e-60 | -8.615850e-47 |
| Msa0183590 | Msa0519220 | 0.819325 | 1.232497e-52 | -8.615850e-47 |
| Msa0183590 | Msa0521310 | 0.816167 | 6.359808e-52 | -8.615850e-47 |
| Msa0183590 | Msa0521880 | 0.830249 | 3.265899e-55 | -8.615850e-47 |
| Msa0183590 | Msa0526710 | 0.806173 | 9.354908e-50 | -8.615850e-47 |
| Msa0183590 | Msa0526890 | 0.807649 | 4.560412e-50 | -8.615850e-47 |
| Msa0183590 | Msa0532330 | 0.803087 | 4.120119e-49 | -8.615850e-47 |
| Msa0183590 | Msa0535030 | 0.831457 | 1.651324e-55 | -8.615850e-47 |
| Msa0183590 | Msa0535060 | 0.832523 | 9.006813e-56 | -8.615850e-47 |
| Msa0183590 | Msa0585900 | 0.803964 | 2.711294e-49 | -8.615850e-47 |
| Msa0183590 | Msa0591060 | 0.824761 | 6.776120e-54 | -8.615850e-47 |
| Msa0183590 | Msa0591770 | 0.843634 | 1.242296e-58 | -8.615850e-47 |
| Msa0183590 | Msa0598460 | 0.808666 | 2.768279e-50 | -8.615850e-47 |
| Msa0183590 | Msa0602120 | 0.807365 | 5.239216e-50 | -8.615850e-47 |
| Msa0183590 | Msa0618010 | 0.804108 | 2.530986e-49 | -8.615850e-47 |
| Msa0183590 | Msa0620810 | 0.826550 | 2.551093e-54 | -8.615850e-47 |
| Msa0183590 | Msa0621590 | 0.814652 | 1.381640e-51 | -8.615850e-47 |
| Msa0183590 | Msa0638280 | 0.849154 | 3.878259e-60 | -8.615850e-47 |
| Msa0183590 | Msa0638320 | 0.851155 | 1.066586e-60 | -8.615850e-47 |
| Msa0183590 | Msa0669850 | 0.838346 | 3.036512e-57 | -8.615850e-47 |
| Msa0183590 | Msa0677270 | 0.847834 | 8.997994e-60 | -8.615850e-47 |
| Msa0183590 | Msa0689010 | 0.827198 | 1.786226e-54 | -8.615850e-47 |
| Msa0183590 | Msa0691050 | 0.809005 | 2.342428e-50 | -8.615850e-47 |
| Msa0183590 | Msa0693380 | 0.810863 | 9.329336e-51 | -8.615850e-47 |
| Msa0183590 | Msa0697400 | 0.816083 | 6.638304e-52 | -8.615850e-47 |
| Msa0183590 | Msa0711490 | 0.812738 | 3.644894e-51 | -8.615850e-47 |
| Msa0183590 | Msa0715110 | 0.839687 | 1.365299e-57 | -8.615850e-47 |
| Msa0183590 | Msa0743680 | 0.820332 | 7.254450e-53 | -8.615850e-47 |
| Msa0183590 | Msa0754720 | -0.823129 | 1.635188e-53 | -8.615850e-47 |
| Msa0183590 | Msa0756630 | -0.807911 | 4.010519e-50 | -8.615850e-47 |
| Msa0183590 | Msa0778320 | 0.809753 | 1.619430e-50 | -8.615850e-47 |
| Msa0183590 | Msa0789570 | 0.803147 | 4.005291e-49 | -8.615850e-47 |
| Msa0183590 | Msa0791910 | 0.808666 | 2.768758e-50 | -8.615850e-47 |
| Msa0183590 | Msa0793720 | 0.802122 | 6.518004e-49 | -8.615850e-47 |
| Msa0183590 | Msa0798030 | 0.800196 | 1.614087e-48 | -8.615850e-47 |
| Msa0183590 | Msa0798070 | 0.809939 | 1.476595e-50 | -8.615850e-47 |
| Msa0183590 | Msa0826190 | 0.805075 | 1.590479e-49 | -8.615850e-47 |
| Msa0183590 | Msa0831580 | 0.804402 | 2.197532e-49 | -8.615850e-47 |
| Msa0183590 | Msa0850960 | 0.810872 | 9.288297e-51 | -8.615850e-47 |
| Msa0183590 | Msa0855430 | 0.816769 | 4.661919e-52 | -8.615850e-47 |
| Msa0183590 | Msa0863800 | 0.819350 | 1.216209e-52 | -8.615850e-47 |
| Msa0183590 | Msa0866120 | 0.815572 | 8.629985e-52 | -8.615850e-47 |
| Msa0183590 | Msa0874670 | 0.801476 | 8.843436e-49 | -8.615850e-47 |
| Msa0183590 | Msa0881020 | 0.815029 | 1.139535e-51 | -8.615850e-47 |
| Msa0183590 | Msa0881030 | 0.823463 | 1.366879e-53 | -8.615850e-47 |
| Msa0183590 | Msa0891040 | 0.803783 | 2.956499e-49 | -8.615850e-47 |
| Msa0183590 | Msa0893810 | 0.830783 | 2.417800e-55 | -8.615850e-47 |
| Msa0183590 | Msa0908050 | 0.822852 | 1.897415e-53 | -8.615850e-47 |
| Msa0183590 | Msa0933440 | 0.822345 | 2.489499e-53 | -8.615850e-47 |
| Msa0183590 | Msa0937670 | 0.837511 | 4.979375e-57 | -8.615850e-47 |
| Msa0183590 | Msa0959010 | 0.823829 | 1.122115e-53 | -8.615850e-47 |
| Msa0183590 | Msa0969570 | 0.844333 | 8.065507e-59 | -8.615850e-47 |
| Msa0183590 | Msa0990960 | 0.801972 | 6.995821e-49 | -8.615850e-47 |
| Msa0183590 | Msa0993530 | 0.863631 | 2.168149e-64 | -8.615850e-47 |
| Msa0183590 | Msa1000940 | 0.831869 | 1.306728e-55 | -8.615850e-47 |
| Msa0183590 | Msa1015060 | 0.816646 | 4.966993e-52 | -8.615850e-47 |
| Msa0183590 | Msa1020710 | 0.805983 | 1.025879e-49 | -8.615850e-47 |
| Msa0183590 | Msa1026760 | 0.836179 | 1.088987e-56 | -8.615850e-47 |
| Msa0183590 | Msa1026790 | 0.833918 | 4.045808e-56 | -8.615850e-47 |
| Msa0183590 | Msa1037700 | -0.821478 | 3.952035e-53 | -8.615850e-47 |
| Msa0183590 | Msa1040120 | 0.800658 | 1.299863e-48 | -8.615850e-47 |
| Msa0183590 | Msa1040890 | 0.803508 | 3.371133e-49 | -8.615850e-47 |
| Msa0183590 | Msa1046300 | 0.820040 | 8.464017e-53 | -8.615850e-47 |
| Msa0183590 | Msa1083210 | 0.812980 | 3.225499e-51 | -8.615850e-47 |
| Msa0183590 | Msa1084260 | 0.811131 | 8.163269e-51 | -8.615850e-47 |
| Msa0183590 | Msa1087470 | 0.800485 | 1.409786e-48 | -8.615850e-47 |
| Msa0183590 | Msa1092820 | 0.822561 | 2.217530e-53 | -8.615850e-47 |
| Msa0183590 | Msa1111700 | 0.801678 | 8.037802e-49 | -8.615850e-47 |
| Msa0183590 | Msa1113200 | 0.821228 | 4.514781e-53 | -8.615850e-47 |
| Msa0183590 | Msa1124310 | 0.803400 | 3.550428e-49 | -8.615850e-47 |
| Msa0183590 | Msa1127830 | 0.811955 | 5.402423e-51 | -8.615850e-47 |
| Msa0183590 | Msa1130210 | -0.838196 | 3.319570e-57 | -8.615850e-47 |
| Msa0183590 | Msa1154160 | 0.804633 | 1.967158e-49 | -8.615850e-47 |
| Msa0183590 | Msa1179940 | 0.800659 | 1.299093e-48 | -8.615850e-47 |
| Msa0183590 | Msa1179970 | 0.808883 | 2.488106e-50 | -8.615850e-47 |
| Msa0183590 | Msa1185540 | 0.847927 | 8.481680e-60 | -8.615850e-47 |
| Msa0183590 | Msa1206020 | 0.822342 | 2.493802e-53 | -8.615850e-47 |
| Msa0183590 | Msa1217830 | 0.805684 | 1.185083e-49 | -8.615850e-47 |
| Msa0183590 | Msa1217860 | 0.818637 | 1.766863e-52 | -8.615850e-47 |
| Msa0183590 | Msa1219430 | 0.812887 | 3.381171e-51 | -8.615850e-47 |
| Msa0183590 | Msa1221900 | 0.808599 | 2.861380e-50 | -8.615850e-47 |
| Msa0183590 | Msa1224830 | 0.805785 | 1.128602e-49 | -8.615850e-47 |
| Msa0183590 | Msa1233500 | 0.800027 | 1.746876e-48 | -8.615850e-47 |
| Msa0183590 | Msa1233890 | 0.809401 | 1.926885e-50 | -8.615850e-47 |
| Msa0183590 | Msa1237030 | 0.808921 | 2.441814e-50 | -8.615850e-47 |
| Msa0183590 | Msa1239530 | 0.821221 | 4.531453e-53 | -8.615850e-47 |
| Msa0183590 | Msa1265070 | 0.841086 | 5.882420e-58 | -8.615850e-47 |
| Msa0183590 | Msa1271210 | 0.805008 | 1.642676e-49 | -8.615850e-47 |
| Msa0183590 | Msa1297090 | 0.802736 | 4.870495e-49 | -8.615850e-47 |
| Msa0183590 | Msa1310210 | 0.816669 | 4.909086e-52 | -8.615850e-47 |
| Msa0183590 | Msa1314100 | 0.800914 | 1.152531e-48 | -8.615850e-47 |
| Msa0183590 | Msa1315870 | 0.810403 | 1.172813e-50 | -8.615850e-47 |
| Msa0183590 | Msa1328850 | 0.819567 | 1.085249e-52 | -8.615850e-47 |
| Msa0183590 | Msa1337730 | 0.828421 | 9.075894e-55 | -8.615850e-47 |
| Msa0183590 | Msa1340020 | 0.802298 | 5.996233e-49 | -8.615850e-47 |
| Msa0183590 | Msa1362510 | 0.860333 | 2.221793e-63 | -8.615850e-47 |
| Msa0183590 | Msa1368350 | 0.800955 | 1.130702e-48 | -8.615850e-47 |
| Msa0183590 | Msa1369530 | 0.827439 | 1.563248e-54 | -8.615850e-47 |
| Msa0183590 | Msa1371310 | 0.802062 | 6.705715e-49 | -8.615850e-47 |
| Msa0183590 | Msa1377660 | 0.801177 | 1.018409e-48 | -8.615850e-47 |
| Msa0183590 | Msa1390230 | 0.804236 | 2.379639e-49 | -8.615850e-47 |
| Msa0183590 | Msa1390310 | 0.805381 | 1.371823e-49 | -8.615850e-47 |
| Msa0183590 | Msa1408790 | 0.806073 | 9.818152e-50 | -8.615850e-47 |
| Msa0183590 | Msa1412140 | 0.800677 | 1.288401e-48 | -8.615850e-47 |
| Msa0183590 | Msa1425250 | 0.827258 | 1.727470e-54 | -8.615850e-47 |
| Msa0183590 | Msa1436040 | 0.802622 | 5.140728e-49 | -8.615850e-47 |
| Msa0183590 | Msa1439960 | 0.818554 | 1.845440e-52 | -8.615850e-47 |
| Msa0183590 | Msa1441190 | 0.821131 | 4.752197e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0183590 | MtrunA17_Chr1g0210821 | 96.226 | 53 | 2 | 0 | 1 | 53 | 1 | 53 | 2.26e-15 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 10 sgRNAs with CRISPR-Local
Find 18 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACTTGCTTGGTGTTCC+AGG | 0.299965 | 1_4:+72548472 | None:intergenic |
| TTCTGAGCTGGTGCAGCAGC+TGG | 0.324083 | 1_4:+72548511 | None:intergenic |
| TGTTGTTGATTCATCGGATT+CGG | 0.387615 | 1_4:+72548568 | None:intergenic |
| GAATGCTGTTGTTGATTCAT+CGG | 0.467905 | 1_4:+72548562 | None:intergenic |
| ACTTGCTTGGTGTTCCAGGT+TGG | 0.540376 | 1_4:+72548476 | None:intergenic |
| GGTTTAGTGTATGTTTGTAT+CGG | 0.541346 | 1_4:+72548307 | None:intergenic |
| TTAGTGTATGTTTGTATCGG+TGG | 0.565691 | 1_4:+72548310 | None:intergenic |
| AAATAGTTGAGAAACTTGCT+TGG | 0.585892 | 1_4:+72548463 | None:intergenic |
| GGAGTTGCAGTTGATGAAGA+TGG | 0.614276 | 1_4:+72548532 | None:intergenic |
| GTTGCAGTTGATGAAGATGG+TGG | 0.743712 | 1_4:+72548535 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAATAGTTGAGAAACTTGCT+TGG | + | chr1_4:72548469-72548488 | None:intergenic | 30.0% |
| ! | ACTTTTTGGATTCAGAGAAG+AGG | - | chr1_4:72548336-72548355 | Msa0183590:CDS | 35.0% |
| !! | TGTTGTTGATTCATCGGATT+CGG | + | chr1_4:72548364-72548383 | None:intergenic | 35.0% |
| !! | GAATGCTGTTGTTGATTCAT+CGG | + | chr1_4:72548370-72548389 | None:intergenic | 35.0% |
| ! | TTTCTCTTTTTCTTCTGAGC+TGG | + | chr1_4:72548433-72548452 | None:intergenic | 35.0% |
| AAGAAAAAGAGAAACCAACC+TGG | - | chr1_4:72548439-72548458 | Msa0183590:intron | 35.0% | |
| ! | AGTTTTTGTCACAATCAAGG+TGG | + | chr1_4:72548563-72548582 | None:intergenic | 35.0% |
| ! | CACAGTTTTTGTCACAATCA+AGG | + | chr1_4:72548566-72548585 | None:intergenic | 35.0% |
| TTAGTGTATGTTTGTATCGG+TGG | + | chr1_4:72548622-72548641 | None:intergenic | 35.0% | |
| !! | TCTTCCTCAGCATCACTTTT+TGG | - | chr1_4:72548322-72548341 | Msa0183590:CDS | 40.0% |
| GAATCCAAAAAGTGATGCTG+AGG | + | chr1_4:72548329-72548348 | None:intergenic | 40.0% | |
| !! | GTTGCAGTTGATGAAGATGG+TGG | + | chr1_4:72548397-72548416 | None:intergenic | 45.0% |
| !! | GGAGTTGCAGTTGATGAAGA+TGG | + | chr1_4:72548400-72548419 | None:intergenic | 45.0% |
| !! | AGAAACTTGCTTGGTGTTCC+AGG | + | chr1_4:72548460-72548479 | None:intergenic | 45.0% |
| TGCATGATTGTGTTCGCAGT+GGG | - | chr1_4:72548517-72548536 | Msa0183590:CDS | 45.0% | |
| !! | ACTTGCTTGGTGTTCCAGGT+TGG | + | chr1_4:72548456-72548475 | None:intergenic | 50.0% |
| GTGCATGATTGTGTTCGCAG+TGG | - | chr1_4:72548516-72548535 | Msa0183590:CDS | 50.0% | |
| TTCTGAGCTGGTGCAGCAGC+TGG | + | chr1_4:72548421-72548440 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 72548310 | 72548641 | 72548310 | ID=Msa0183590;Name=Msa0183590 |
| chr1_4 | mRNA | 72548310 | 72548641 | 72548310 | ID=Msa0183590-mRNA-1;Parent=Msa0183590;Name=Msa0183590-mRNA-1;_AED=0.66;_eAED=0.66;_QI=0|0|0|0.5|1|1|2|0|89 |
| chr1_4 | exon | 72548478 | 72548641 | 72548478 | ID=Msa0183590-mRNA-1:exon:24559;Parent=Msa0183590-mRNA-1 |
| chr1_4 | exon | 72548310 | 72548415 | 72548310 | ID=Msa0183590-mRNA-1:exon:24558;Parent=Msa0183590-mRNA-1 |
| chr1_4 | CDS | 72548478 | 72548641 | 72548478 | ID=Msa0183590-mRNA-1:cds;Parent=Msa0183590-mRNA-1 |
| chr1_4 | CDS | 72548310 | 72548415 | 72548310 | ID=Msa0183590-mRNA-1:cds;Parent=Msa0183590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
