Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448820 | sp|Q9SLH7|PER20_ARATH | 66.883 | 308 | 102 | 0 | 24 | 331 | 28 | 335 | 5.82e-154 | 438 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448820 | G7JZV3 | 93.976 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 0.0 | 630 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0024650 | Msa1448820 | 0.819673 | 1.026473e-52 | -8.615850e-47 |
| Msa0025570 | Msa1448820 | 0.806435 | 8.237353e-50 | -8.615850e-47 |
| Msa0028690 | Msa1448820 | 0.848597 | 5.537161e-60 | -8.615850e-47 |
| Msa0051980 | Msa1448820 | 0.824119 | 9.590031e-54 | -8.615850e-47 |
| Msa0052060 | Msa1448820 | 0.807508 | 4.884204e-50 | -8.615850e-47 |
| Msa0060410 | Msa1448820 | 0.846779 | 1.752653e-59 | -8.615850e-47 |
| Msa0072180 | Msa1448820 | 0.808801 | 2.590457e-50 | -8.615850e-47 |
| Msa0073110 | Msa1448820 | 0.810403 | 1.172661e-50 | -8.615850e-47 |
| Msa0097010 | Msa1448820 | 0.825373 | 4.855932e-54 | -8.615850e-47 |
| Msa0119240 | Msa1448820 | 0.824666 | 7.134621e-54 | -8.615850e-47 |
| Msa0120450 | Msa1448820 | 0.809538 | 1.801231e-50 | -8.615850e-47 |
| Msa1344450 | Msa1448820 | 0.802598 | 5.199236e-49 | -8.615850e-47 |
| Msa1376880 | Msa1448820 | 0.801281 | 9.695309e-49 | -8.615850e-47 |
| Msa1380740 | Msa1448820 | 0.800556 | 1.363438e-48 | -8.615850e-47 |
| Msa1384130 | Msa1448820 | 0.811271 | 7.611742e-51 | -8.615850e-47 |
| Msa1386830 | Msa1448820 | 0.830212 | 3.334815e-55 | -8.615850e-47 |
| Msa1395080 | Msa1448820 | 0.840692 | 7.459729e-58 | -8.615850e-47 |
| Msa1407810 | Msa1448820 | 0.822494 | 2.298780e-53 | -8.615850e-47 |
| Msa1413450 | Msa1448820 | 0.817405 | 3.355182e-52 | -8.615850e-47 |
| Msa1430950 | Msa1448820 | 0.825384 | 4.826810e-54 | -8.615850e-47 |
| Msa1433040 | Msa1448820 | 0.814062 | 1.865546e-51 | -8.615850e-47 |
| Msa1433360 | Msa1448820 | 0.829936 | 3.893549e-55 | -8.615850e-47 |
| Msa1437780 | Msa1448820 | 0.822571 | 2.205543e-53 | -8.615850e-47 |
| Msa1445530 | Msa1448820 | 0.832722 | 8.035871e-56 | -8.615850e-47 |
| Msa1448820 | Msa1458270 | 0.800637 | 1.312407e-48 | -8.615850e-47 |
| Msa0643230 | Msa1448820 | 0.822025 | 2.953103e-53 | -8.615850e-47 |
| Msa0647300 | Msa1448820 | 0.803206 | 3.893029e-49 | -8.615850e-47 |
| Msa0657710 | Msa1448820 | 0.822892 | 1.857527e-53 | -8.615850e-47 |
| Msa0658150 | Msa1448820 | 0.837580 | 4.780294e-57 | -8.615850e-47 |
| Msa0682910 | Msa1448820 | 0.803866 | 2.841786e-49 | -8.615850e-47 |
| Msa0686830 | Msa1448820 | 0.803780 | 2.961247e-49 | -8.615850e-47 |
| Msa0702800 | Msa1448820 | 0.826226 | 3.047030e-54 | -8.615850e-47 |
| Msa0703000 | Msa1448820 | 0.839991 | 1.137941e-57 | -8.615850e-47 |
| Msa0707330 | Msa1448820 | 0.823166 | 1.603643e-53 | -8.615850e-47 |
| Msa0713400 | Msa1448820 | 0.839153 | 1.878439e-57 | -8.615850e-47 |
| Msa0755470 | Msa1448820 | 0.844052 | 9.600359e-59 | -8.615850e-47 |
| Msa0758990 | Msa1448820 | 0.800615 | 1.326550e-48 | -8.615850e-47 |
| Msa0773030 | Msa1448820 | 0.834222 | 3.395050e-56 | -8.615850e-47 |
| Msa0800120 | Msa1448820 | 0.803759 | 2.990558e-49 | -8.615850e-47 |
| Msa0810330 | Msa1448820 | 0.823370 | 1.436637e-53 | -8.615850e-47 |
| Msa0812720 | Msa1448820 | 0.810043 | 1.402271e-50 | -8.615850e-47 |
| Msa0828960 | Msa1448820 | 0.823040 | 1.715578e-53 | -8.615850e-47 |
| Msa0838210 | Msa1448820 | 0.807518 | 4.861553e-50 | -8.615850e-47 |
| Msa0163690 | Msa1448820 | 0.807758 | 4.322814e-50 | -8.615850e-47 |
| Msa0168750 | Msa1448820 | 0.838462 | 2.834870e-57 | -8.615850e-47 |
| Msa0189680 | Msa1448820 | 0.810891 | 9.197313e-51 | -8.615850e-47 |
| Msa0189990 | Msa1448820 | 0.834726 | 2.537093e-56 | -8.615850e-47 |
| Msa0218500 | Msa1448820 | 0.805567 | 1.254035e-49 | -8.615850e-47 |
| Msa0231990 | Msa1448820 | 0.807218 | 5.628423e-50 | -8.615850e-47 |
| Msa0232060 | Msa1448820 | 0.805766 | 1.139116e-49 | -8.615850e-47 |
| Msa1242160 | Msa1448820 | 0.813975 | 1.949410e-51 | -8.615850e-47 |
| Msa1255690 | Msa1448820 | 0.820031 | 8.501358e-53 | -8.615850e-47 |
| Msa1263110 | Msa1448820 | 0.806188 | 9.285854e-50 | -8.615850e-47 |
| Msa1268360 | Msa1448820 | 0.810036 | 1.407348e-50 | -8.615850e-47 |
| Msa1283930 | Msa1448820 | 0.814459 | 1.523877e-51 | -8.615850e-47 |
| Msa1284020 | Msa1448820 | 0.822930 | 1.820015e-53 | -8.615850e-47 |
| Msa1322960 | Msa1448820 | 0.824482 | 7.880182e-54 | -8.615850e-47 |
| Msa1323070 | Msa1448820 | 0.801480 | 8.827033e-49 | -8.615850e-47 |
| Msa1334700 | Msa1448820 | 0.809796 | 1.585364e-50 | -8.615850e-47 |
| Msa0418230 | Msa1448820 | 0.815909 | 7.259289e-52 | -8.615850e-47 |
| Msa0464620 | Msa1448820 | 0.810072 | 1.382187e-50 | -8.615850e-47 |
| Msa0248320 | Msa1448820 | 0.806333 | 8.657600e-50 | -8.615850e-47 |
| Msa0258260 | Msa1448820 | 0.821298 | 4.349117e-53 | -8.615850e-47 |
| Msa0297340 | Msa1448820 | 0.812009 | 5.259283e-51 | -8.615850e-47 |
| Msa0307740 | Msa1448820 | 0.825300 | 5.054717e-54 | -8.615850e-47 |
| Msa0333770 | Msa1448820 | 0.807974 | 3.888822e-50 | -8.615850e-47 |
| Msa0356240 | Msa1448820 | 0.820351 | 7.183356e-53 | -8.615850e-47 |
| Msa0356270 | Msa1448820 | 0.823402 | 1.412195e-53 | -8.615850e-47 |
| Msa1115900 | Msa1448820 | 0.805272 | 1.445898e-49 | -8.615850e-47 |
| Msa1160540 | Msa1448820 | 0.802550 | 5.319552e-49 | -8.615850e-47 |
| Msa1202800 | Msa1448820 | 0.803327 | 3.675666e-49 | -8.615850e-47 |
| Msa1203650 | Msa1448820 | 0.822076 | 2.874137e-53 | -8.615850e-47 |
| Msa1211940 | Msa1448820 | 0.846113 | 2.663044e-59 | -8.615850e-47 |
| Msa1212080 | Msa1448820 | 0.841571 | 4.383238e-58 | -8.615850e-47 |
| Msa0510050 | Msa1448820 | 0.803036 | 4.221756e-49 | -8.615850e-47 |
| Msa0547370 | Msa1448820 | 0.802449 | 5.581667e-49 | -8.615850e-47 |
| Msa0566490 | Msa1448820 | 0.809540 | 1.799015e-50 | -8.615850e-47 |
| Msa0567330 | Msa1448820 | 0.825652 | 4.171352e-54 | -8.615850e-47 |
| Msa0567570 | Msa1448820 | 0.818704 | 1.705697e-52 | -8.615850e-47 |
| Msa0576320 | Msa1448820 | 0.823188 | 1.584191e-53 | -8.615850e-47 |
| Msa0598310 | Msa1448820 | 0.809515 | 1.821935e-50 | -8.615850e-47 |
| Msa0850640 | Msa1448820 | 0.806505 | 7.961142e-50 | -8.615850e-47 |
| Msa0896920 | Msa1448820 | 0.809349 | 1.977697e-50 | -8.615850e-47 |
| Msa0909260 | Msa1448820 | 0.820229 | 7.661068e-53 | -8.615850e-47 |
| Msa0964510 | Msa1448820 | 0.827506 | 1.506879e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448820 | MtrunA17_Chr5g0400331 | 93.976 | 332 | 20 | 0 | 1 | 332 | 1 | 332 | 0.0 | 630 |
| Msa1448820 | MtrunA17_Chr8g0372601 | 54.248 | 306 | 135 | 2 | 26 | 331 | 30 | 330 | 3.58e-113 | 331 |
| Msa1448820 | MtrunA17_Chr5g0404721 | 53.074 | 309 | 138 | 3 | 24 | 331 | 28 | 330 | 4.95e-112 | 328 |
| Msa1448820 | MtrunA17_Chr1g0155611 | 51.634 | 306 | 144 | 2 | 26 | 331 | 46 | 347 | 1.67e-100 | 300 |
| Msa1448820 | MtrunA17_Chr4g0068621 | 49.346 | 306 | 148 | 2 | 26 | 331 | 38 | 336 | 4.32e-100 | 298 |
| Msa1448820 | MtrunA17_Chr5g0438021 | 49.541 | 327 | 150 | 4 | 7 | 331 | 12 | 325 | 4.50e-99 | 295 |
| Msa1448820 | MtrunA17_Chr7g0244461 | 46.341 | 328 | 155 | 4 | 4 | 331 | 6 | 312 | 3.26e-98 | 292 |
| Msa1448820 | MtrunA17_Chr3g0129051 | 47.840 | 324 | 149 | 5 | 7 | 328 | 14 | 319 | 6.75e-98 | 292 |
| Msa1448820 | MtrunA17_Chr3g0106921 | 47.734 | 331 | 151 | 7 | 4 | 331 | 9 | 320 | 1.11e-97 | 291 |
| Msa1448820 | MtrunA17_Chr3g0114451 | 47.432 | 331 | 161 | 3 | 1 | 331 | 1 | 318 | 1.07e-96 | 289 |
| Msa1448820 | MtrunA17_Chr4g0013171 | 48.160 | 326 | 154 | 4 | 8 | 331 | 9 | 321 | 2.37e-96 | 288 |
| Msa1448820 | MtrunA17_Chr2g0320071 | 47.975 | 321 | 152 | 4 | 13 | 331 | 10 | 317 | 3.58e-96 | 287 |
| Msa1448820 | MtrunA17_Chr7g0244451 | 48.758 | 322 | 150 | 4 | 10 | 331 | 10 | 316 | 6.96e-96 | 286 |
| Msa1448820 | MtrunA17_Chr4g0038151 | 46.789 | 327 | 165 | 2 | 5 | 331 | 4 | 321 | 8.02e-95 | 284 |
| Msa1448820 | MtrunA17_Chr2g0320101 | 47.692 | 325 | 154 | 6 | 9 | 331 | 7 | 317 | 2.96e-94 | 283 |
| Msa1448820 | MtrunA17_Chr4g0013191 | 48.125 | 320 | 155 | 3 | 12 | 331 | 32 | 340 | 3.59e-94 | 283 |
| Msa1448820 | MtrunA17_Chr2g0320061 | 46.726 | 336 | 156 | 7 | 1 | 331 | 1 | 318 | 5.94e-94 | 282 |
| Msa1448820 | MtrunA17_Chr3g0129061 | 48.012 | 327 | 150 | 5 | 7 | 331 | 14 | 322 | 1.18e-93 | 281 |
| Msa1448820 | MtrunA17_Chr2g0292091 | 47.386 | 306 | 157 | 2 | 26 | 331 | 24 | 325 | 2.29e-93 | 281 |
| Msa1448820 | MtrunA17_Chr2g0299691 | 50.000 | 306 | 142 | 5 | 30 | 331 | 60 | 358 | 6.11e-93 | 281 |
| Msa1448820 | MtrunA17_Chr4g0070951 | 47.883 | 307 | 154 | 3 | 26 | 331 | 28 | 329 | 7.58e-93 | 279 |
| Msa1448820 | MtrunA17_Chr4g0013181 | 48.852 | 305 | 141 | 5 | 29 | 331 | 62 | 353 | 1.69e-92 | 279 |
| Msa1448820 | MtrunA17_Chr2g0320051 | 45.619 | 331 | 167 | 4 | 1 | 331 | 1 | 318 | 1.76e-92 | 278 |
| Msa1448820 | MtrunA17_Chr4g0043391 | 46.224 | 331 | 163 | 5 | 4 | 331 | 6 | 324 | 4.47e-92 | 277 |
| Msa1448820 | MtrunA17_Chr2g0320091 | 46.319 | 326 | 158 | 6 | 9 | 331 | 7 | 318 | 1.60e-91 | 276 |
| Msa1448820 | MtrunA17_Chr1g0213061 | 46.626 | 326 | 156 | 6 | 8 | 331 | 12 | 321 | 2.20e-91 | 276 |
| Msa1448820 | MtrunA17_Chr4g0038161 | 45.455 | 330 | 164 | 4 | 5 | 331 | 4 | 320 | 5.23e-91 | 274 |
| Msa1448820 | MtrunA17_Chr3g0129041 | 47.619 | 336 | 157 | 7 | 1 | 331 | 1 | 322 | 1.06e-90 | 274 |
| Msa1448820 | MtrunA17_Chr7g0258811 | 46.580 | 307 | 159 | 3 | 26 | 331 | 69 | 371 | 1.23e-90 | 275 |
| Msa1448820 | MtrunA17_Chr4g0038171 | 46.037 | 328 | 168 | 3 | 4 | 331 | 3 | 321 | 1.27e-90 | 273 |
| Msa1448820 | MtrunA17_Chr5g0421411 | 48.780 | 287 | 136 | 4 | 50 | 331 | 5 | 285 | 4.41e-90 | 271 |
| Msa1448820 | MtrunA17_Chr4g0013201 | 47.231 | 307 | 147 | 4 | 26 | 331 | 46 | 338 | 6.66e-90 | 272 |
| Msa1448820 | MtrunA17_Chr2g0292181 | 47.351 | 302 | 155 | 2 | 30 | 331 | 42 | 339 | 7.41e-90 | 273 |
| Msa1448820 | MtrunA17_Chr2g0292101 | 47.386 | 306 | 157 | 2 | 26 | 331 | 25 | 326 | 1.32e-89 | 271 |
| Msa1448820 | MtrunA17_Chr2g0292261 | 46.732 | 306 | 159 | 2 | 26 | 331 | 29 | 330 | 3.48e-89 | 271 |
| Msa1448820 | MtrunA17_Chr5g0432441 | 48.710 | 310 | 142 | 5 | 26 | 331 | 30 | 326 | 3.52e-89 | 270 |
| Msa1448820 | MtrunA17_Chr1g0175561 | 45.875 | 303 | 159 | 3 | 30 | 331 | 28 | 326 | 4.86e-89 | 270 |
| Msa1448820 | MtrunA17_Chr2g0292211 | 44.411 | 331 | 180 | 2 | 1 | 331 | 15 | 341 | 7.94e-89 | 270 |
| Msa1448820 | MtrunA17_Chr2g0320031 | 44.713 | 331 | 168 | 5 | 4 | 331 | 1 | 319 | 3.82e-88 | 267 |
| Msa1448820 | MtrunA17_Chr2g0292241 | 46.689 | 302 | 157 | 2 | 30 | 331 | 33 | 330 | 4.55e-87 | 265 |
| Msa1448820 | MtrunA17_Chr3g0106901 | 47.256 | 328 | 156 | 4 | 5 | 331 | 12 | 323 | 1.40e-86 | 263 |
| Msa1448820 | MtrunA17_Chr2g0292251 | 45.928 | 307 | 160 | 4 | 26 | 331 | 28 | 329 | 2.26e-86 | 264 |
| Msa1448820 | MtrunA17_Chr2g0292271 | 46.026 | 302 | 159 | 2 | 30 | 331 | 33 | 330 | 3.24e-86 | 263 |
| Msa1448820 | MtrunA17_Chr5g0402571 | 44.479 | 326 | 172 | 5 | 7 | 331 | 9 | 326 | 8.99e-86 | 261 |
| Msa1448820 | MtrunA17_Chr2g0292151 | 45.338 | 311 | 156 | 3 | 26 | 331 | 29 | 330 | 2.06e-85 | 261 |
| Msa1448820 | MtrunA17_Chr5g0432351 | 45.122 | 328 | 164 | 7 | 7 | 331 | 7 | 321 | 2.37e-85 | 260 |
| Msa1448820 | MtrunA17_Chr7g0224371 | 44.923 | 325 | 164 | 5 | 7 | 331 | 13 | 322 | 6.78e-85 | 259 |
| Msa1448820 | MtrunA17_Chr5g0432331 | 45.289 | 329 | 162 | 8 | 7 | 331 | 38 | 352 | 1.44e-84 | 259 |
| Msa1448820 | MtrunA17_Chr2g0292291 | 45.395 | 304 | 161 | 3 | 29 | 331 | 33 | 332 | 4.73e-84 | 258 |
| Msa1448820 | MtrunA17_Chr2g0292111 | 45.277 | 307 | 154 | 4 | 30 | 331 | 33 | 330 | 8.46e-84 | 257 |
| Msa1448820 | MtrunA17_Chr2g0291751 | 43.114 | 334 | 183 | 3 | 1 | 331 | 1 | 330 | 1.64e-83 | 256 |
| Msa1448820 | MtrunA17_Chr5g0432341 | 44.512 | 328 | 166 | 7 | 7 | 331 | 7 | 321 | 4.22e-83 | 254 |
| Msa1448820 | MtrunA17_Chr5g0402581 | 44.172 | 326 | 173 | 5 | 7 | 331 | 9 | 326 | 1.07e-82 | 253 |
| Msa1448820 | MtrunA17_Chr6g0477071 | 42.903 | 310 | 152 | 7 | 26 | 331 | 54 | 342 | 3.50e-81 | 250 |
| Msa1448820 | MtrunA17_Chr4g0013721 | 44.040 | 302 | 160 | 4 | 30 | 331 | 104 | 396 | 1.44e-80 | 251 |
| Msa1448820 | MtrunA17_Chr4g0013821 | 43.750 | 304 | 158 | 5 | 30 | 331 | 32 | 324 | 1.59e-79 | 246 |
| Msa1448820 | MtrunA17_Chr3g0107881 | 43.465 | 329 | 165 | 6 | 6 | 331 | 14 | 324 | 3.32e-79 | 244 |
| Msa1448820 | MtrunA17_Chr1g0194151 | 42.342 | 333 | 180 | 5 | 4 | 331 | 8 | 333 | 5.78e-79 | 244 |
| Msa1448820 | MtrunA17_Chr1g0194271 | 41.593 | 339 | 181 | 4 | 4 | 331 | 8 | 340 | 1.82e-78 | 243 |
| Msa1448820 | MtrunA17_Chr4g0024121 | 41.718 | 326 | 179 | 5 | 6 | 331 | 12 | 326 | 1.92e-76 | 237 |
| Msa1448820 | MtrunA17_Chr1g0188431 | 40.237 | 338 | 178 | 8 | 1 | 331 | 7 | 327 | 5.34e-76 | 236 |
| Msa1448820 | MtrunA17_Chr5g0405991 | 39.939 | 328 | 185 | 6 | 4 | 331 | 1 | 316 | 9.20e-76 | 235 |
| Msa1448820 | MtrunA17_Chr1g0204011 | 41.964 | 336 | 176 | 10 | 1 | 331 | 1 | 322 | 2.43e-75 | 234 |
| Msa1448820 | MtrunA17_Chr2g0322861 | 42.904 | 303 | 165 | 5 | 30 | 331 | 91 | 386 | 4.00e-74 | 233 |
| Msa1448820 | MtrunA17_Chr3g0128061 | 39.759 | 332 | 193 | 3 | 1 | 331 | 1 | 326 | 1.31e-73 | 230 |
| Msa1448820 | MtrunA17_Chr8g0371381 | 42.345 | 307 | 163 | 7 | 26 | 331 | 26 | 319 | 3.42e-73 | 229 |
| Msa1448820 | MtrunA17_Chr7g0268501 | 41.830 | 306 | 168 | 4 | 26 | 331 | 25 | 320 | 1.44e-72 | 227 |
| Msa1448820 | MtrunA17_Chr7g0268521 | 41.830 | 306 | 168 | 4 | 26 | 331 | 25 | 320 | 1.44e-72 | 227 |
| Msa1448820 | MtrunA17_Chr4g0076211 | 44.554 | 303 | 153 | 7 | 30 | 331 | 45 | 333 | 1.12e-71 | 225 |
| Msa1448820 | MtrunA17_Chr4g0063671 | 42.553 | 329 | 171 | 8 | 8 | 331 | 5 | 320 | 6.57e-71 | 223 |
| Msa1448820 | MtrunA17_Chr7g0254231 | 39.735 | 302 | 166 | 5 | 30 | 331 | 26 | 311 | 1.13e-70 | 222 |
| Msa1448820 | MtrunA17_Chr2g0296621 | 44.481 | 308 | 155 | 9 | 25 | 331 | 49 | 341 | 2.75e-69 | 219 |
| Msa1448820 | MtrunA17_Chr6g0460711 | 39.157 | 332 | 183 | 8 | 1 | 331 | 1 | 314 | 8.94e-69 | 218 |
| Msa1448820 | MtrunA17_Chr4g0075241 | 38.235 | 306 | 182 | 4 | 26 | 331 | 29 | 327 | 1.27e-68 | 217 |
| Msa1448820 | MtrunA17_Chr1g0164891 | 41.503 | 306 | 169 | 6 | 30 | 331 | 93 | 392 | 1.56e-67 | 216 |
| Msa1448820 | MtrunA17_Chr7g0254201 | 39.404 | 302 | 170 | 5 | 30 | 331 | 24 | 312 | 2.11e-67 | 214 |
| Msa1448820 | MtrunA17_Chr2g0279041 | 40.122 | 329 | 180 | 7 | 6 | 331 | 11 | 325 | 3.11e-67 | 214 |
| Msa1448820 | MtrunA17_Chr2g0329641 | 38.690 | 336 | 184 | 7 | 7 | 331 | 11 | 335 | 4.55e-67 | 214 |
| Msa1448820 | MtrunA17_Chr1g0157051 | 39.264 | 326 | 179 | 8 | 6 | 330 | 10 | 317 | 8.67e-67 | 212 |
| Msa1448820 | MtrunA17_Chr5g0432401 | 38.095 | 336 | 146 | 7 | 2 | 330 | 5 | 285 | 9.79e-67 | 211 |
| Msa1448820 | MtrunA17_Chr7g0225221 | 37.538 | 333 | 193 | 6 | 1 | 331 | 1 | 320 | 3.73e-66 | 211 |
| Msa1448820 | MtrunA17_Chr4g0046131 | 40.446 | 314 | 176 | 6 | 19 | 327 | 35 | 342 | 1.18e-65 | 210 |
| Msa1448820 | MtrunA17_Chr1g0197411 | 37.195 | 328 | 196 | 6 | 3 | 327 | 6 | 326 | 1.94e-65 | 209 |
| Msa1448820 | MtrunA17_Chr3g0136751 | 38.671 | 331 | 194 | 5 | 1 | 331 | 1 | 322 | 2.30e-64 | 206 |
| Msa1448820 | MtrunA17_Chr8g0364291 | 38.217 | 314 | 174 | 5 | 26 | 331 | 23 | 324 | 2.85e-64 | 206 |
| Msa1448820 | MtrunA17_Chr1g0181431 | 37.500 | 312 | 179 | 5 | 23 | 331 | 25 | 323 | 1.06e-63 | 204 |
| Msa1448820 | MtrunA17_Chr6g0467251 | 37.829 | 304 | 172 | 6 | 26 | 327 | 36 | 324 | 3.18e-63 | 204 |
| Msa1448820 | MtrunA17_Chr6g0467161 | 36.310 | 336 | 185 | 7 | 8 | 331 | 18 | 336 | 3.87e-63 | 203 |
| Msa1448820 | MtrunA17_Chr6g0451571 | 36.474 | 329 | 194 | 7 | 7 | 331 | 17 | 334 | 5.37e-63 | 203 |
| Msa1448820 | MtrunA17_Chr1g0181511 | 36.275 | 306 | 180 | 4 | 29 | 331 | 30 | 323 | 1.51e-61 | 199 |
| Msa1448820 | MtrunA17_Chr6g0467121 | 36.688 | 308 | 175 | 6 | 26 | 331 | 74 | 363 | 5.08e-61 | 199 |
| Msa1448820 | MtrunA17_Chr1g0181481 | 36.275 | 306 | 180 | 5 | 29 | 331 | 30 | 323 | 1.01e-60 | 197 |
| Msa1448820 | MtrunA17_Chr5g0401431 | 35.714 | 336 | 202 | 6 | 1 | 330 | 1 | 328 | 2.25e-60 | 196 |
| Msa1448820 | MtrunA17_Chr4g0072091 | 39.016 | 305 | 174 | 6 | 26 | 327 | 24 | 319 | 6.39e-60 | 195 |
| Msa1448820 | MtrunA17_Chr1g0148021 | 37.195 | 328 | 190 | 8 | 8 | 331 | 13 | 328 | 1.27e-59 | 194 |
| Msa1448820 | MtrunA17_Chr2g0316791 | 37.612 | 335 | 168 | 10 | 26 | 327 | 76 | 402 | 3.45e-58 | 193 |
| Msa1448820 | MtrunA17_Chr2g0316191 | 36.257 | 342 | 176 | 9 | 20 | 327 | 70 | 403 | 9.39e-58 | 192 |
| Msa1448820 | MtrunA17_Chr2g0316831 | 36.070 | 341 | 177 | 9 | 20 | 327 | 106 | 438 | 1.53e-57 | 192 |
| Msa1448820 | MtrunA17_Chr2g0316481 | 36.364 | 341 | 176 | 9 | 20 | 327 | 70 | 402 | 2.83e-57 | 190 |
| Msa1448820 | MtrunA17_Chr2g0278671 | 39.344 | 305 | 173 | 7 | 30 | 331 | 28 | 323 | 1.90e-55 | 183 |
| Msa1448820 | MtrunA17_Chr5g0413051 | 39.172 | 314 | 174 | 10 | 26 | 331 | 73 | 377 | 1.09e-54 | 183 |
| Msa1448820 | MtrunA17_Chr4g0053871 | 37.255 | 306 | 176 | 7 | 26 | 327 | 27 | 320 | 3.74e-54 | 180 |
| Msa1448820 | MtrunA17_Chr4g0074851 | 35.484 | 310 | 183 | 6 | 26 | 331 | 32 | 328 | 1.93e-53 | 178 |
| Msa1448820 | MtrunA17_Chr3g0114461 | 46.829 | 205 | 96 | 4 | 127 | 331 | 1 | 192 | 1.55e-52 | 171 |
| Msa1448820 | MtrunA17_Chr2g0311251 | 33.828 | 337 | 183 | 8 | 26 | 330 | 11 | 339 | 3.27e-51 | 173 |
| Msa1448820 | MtrunA17_Chr2g0311241 | 31.854 | 383 | 178 | 10 | 19 | 327 | 53 | 426 | 8.59e-51 | 174 |
| Msa1448820 | MtrunA17_Chr2g0279061 | 40.226 | 266 | 144 | 7 | 70 | 331 | 12 | 266 | 1.89e-50 | 168 |
| Msa1448820 | MtrunA17_Chr2g0292281 | 44.131 | 213 | 105 | 4 | 119 | 331 | 18 | 216 | 1.22e-45 | 155 |
| Msa1448820 | MtrunA17_Chr2g0316811 | 40.000 | 240 | 129 | 7 | 20 | 256 | 44 | 271 | 1.23e-37 | 137 |
| Msa1448820 | MtrunA17_Chr2g0316141 | 34.420 | 276 | 162 | 10 | 70 | 331 | 9 | 279 | 3.37e-36 | 132 |
| Msa1448820 | MtrunA17_Chr2g0316181 | 34.420 | 276 | 162 | 10 | 70 | 331 | 9 | 279 | 3.37e-36 | 132 |
| Msa1448820 | MtrunA17_Chr4g0004591 | 30.183 | 328 | 159 | 5 | 25 | 330 | 76 | 355 | 6.43e-36 | 133 |
| Msa1448820 | MtrunA17_Chr3g0114491 | 50.400 | 125 | 62 | 0 | 9 | 133 | 1 | 125 | 1.60e-34 | 123 |
| Msa1448820 | MtrunA17_Chr3g0104101 | 39.241 | 158 | 63 | 5 | 190 | 331 | 9 | 149 | 6.99e-26 | 100 |
| Msa1448820 | MtrunA17_Chr1g0181501 | 30.808 | 198 | 122 | 4 | 137 | 331 | 4 | 189 | 5.88e-23 | 94.4 |
| Msa1448820 | MtrunA17_Chr1g0181491 | 42.991 | 107 | 59 | 2 | 29 | 135 | 15 | 119 | 7.23e-23 | 92.8 |
| Msa1448820 | MtrunA17_Chr5g0432321 | 40.157 | 127 | 65 | 3 | 147 | 273 | 17 | 132 | 1.21e-21 | 89.0 |
| Msa1448820 | MtrunA17_Chr6g0468731 | 61.972 | 71 | 23 | 2 | 65 | 135 | 22 | 88 | 1.45e-20 | 84.7 |
| Msa1448820 | MtrunA17_Chr7g0254171 | 35.766 | 137 | 81 | 3 | 72 | 205 | 4 | 136 | 2.59e-18 | 80.1 |
| Msa1448820 | MtrunA17_Chr7g0254181 | 38.400 | 125 | 72 | 3 | 69 | 192 | 2 | 122 | 2.61e-18 | 80.9 |
| Msa1448820 | MtrunA17_Chr1g0196191 | 58.209 | 67 | 27 | 1 | 68 | 134 | 27 | 92 | 2.30e-17 | 78.2 |
| Msa1448820 | MtrunA17_Chr4g0013811 | 48.611 | 72 | 37 | 0 | 137 | 208 | 6 | 77 | 6.31e-17 | 74.7 |
| Msa1448820 | MtrunA17_Chr7g0268491 | 39.080 | 87 | 49 | 1 | 245 | 331 | 15 | 97 | 4.56e-13 | 64.3 |
| Msa1448820 | MtrunA17_Chr5g0432361 | 39.785 | 93 | 48 | 3 | 241 | 330 | 21 | 108 | 5.86e-11 | 58.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1448820 | AT2G35380.1 | 66.883 | 308 | 102 | 0 | 24 | 331 | 28 | 335 | 5.91e-155 | 438 |
| Msa1448820 | AT2G35380.2 | 66.802 | 247 | 82 | 0 | 85 | 331 | 1 | 247 | 3.38e-121 | 349 |
| Msa1448820 | AT5G66390.1 | 53.268 | 306 | 138 | 2 | 26 | 331 | 33 | 333 | 5.86e-111 | 326 |
| Msa1448820 | AT3G50990.1 | 52.614 | 306 | 140 | 3 | 26 | 331 | 41 | 341 | 4.44e-109 | 322 |
| Msa1448820 | AT2G18150.1 | 51.307 | 306 | 144 | 2 | 26 | 331 | 36 | 336 | 1.73e-106 | 315 |
| Msa1448820 | AT1G44970.1 | 53.268 | 306 | 139 | 3 | 26 | 331 | 45 | 346 | 7.79e-106 | 313 |
| Msa1448820 | AT4G36430.1 | 51.307 | 306 | 144 | 2 | 26 | 331 | 30 | 330 | 2.28e-104 | 309 |
| Msa1448820 | AT4G16270.1 | 50.485 | 309 | 142 | 5 | 26 | 331 | 48 | 348 | 1.80e-100 | 300 |
| Msa1448820 | AT2G18140.1 | 49.346 | 306 | 150 | 2 | 26 | 331 | 35 | 335 | 4.31e-100 | 298 |
| Msa1448820 | AT5G06720.1 | 46.012 | 326 | 171 | 3 | 6 | 331 | 13 | 333 | 2.08e-97 | 291 |
| Msa1448820 | AT1G68850.1 | 45.955 | 309 | 161 | 3 | 26 | 331 | 30 | 335 | 6.74e-94 | 283 |
| Msa1448820 | AT5G58400.1 | 47.720 | 329 | 152 | 7 | 6 | 331 | 14 | 325 | 1.26e-92 | 279 |
| Msa1448820 | AT5G58390.1 | 48.024 | 329 | 151 | 6 | 6 | 331 | 5 | 316 | 3.97e-92 | 277 |
| Msa1448820 | AT5G06730.1 | 42.945 | 326 | 181 | 3 | 6 | 331 | 14 | 334 | 1.37e-91 | 278 |
| Msa1448820 | AT5G19890.1 | 47.557 | 307 | 151 | 5 | 26 | 331 | 30 | 327 | 4.59e-91 | 275 |
| Msa1448820 | AT3G32980.1 | 44.937 | 316 | 170 | 2 | 17 | 331 | 22 | 334 | 3.36e-90 | 274 |
| Msa1448820 | AT5G05340.1 | 46.429 | 308 | 150 | 5 | 26 | 331 | 30 | 324 | 3.59e-89 | 270 |
| Msa1448820 | AT2G38390.1 | 46.104 | 308 | 161 | 3 | 26 | 332 | 31 | 334 | 1.43e-88 | 270 |
| Msa1448820 | AT1G14550.1 | 43.505 | 331 | 169 | 6 | 4 | 331 | 6 | 321 | 2.83e-88 | 268 |
| Msa1448820 | AT3G49120.1 | 43.354 | 316 | 175 | 2 | 17 | 331 | 23 | 335 | 5.18e-87 | 266 |
| Msa1448820 | AT1G49570.1 | 45.253 | 316 | 168 | 3 | 15 | 329 | 37 | 348 | 6.33e-87 | 265 |
| Msa1448820 | AT3G49110.1 | 44.625 | 307 | 166 | 2 | 26 | 331 | 33 | 336 | 3.34e-86 | 264 |
| Msa1448820 | AT2G38380.1 | 46.230 | 305 | 159 | 3 | 29 | 332 | 34 | 334 | 5.66e-86 | 263 |
| Msa1448820 | AT4G08780.1 | 44.625 | 307 | 166 | 2 | 26 | 331 | 24 | 327 | 1.40e-85 | 262 |
| Msa1448820 | AT1G14540.1 | 44.702 | 302 | 156 | 3 | 30 | 331 | 25 | 315 | 4.38e-85 | 259 |
| Msa1448820 | AT2G22420.1 | 42.598 | 331 | 178 | 5 | 1 | 331 | 1 | 319 | 5.17e-85 | 259 |
| Msa1448820 | AT4G08770.1 | 45.277 | 307 | 164 | 2 | 26 | 331 | 24 | 327 | 1.73e-84 | 259 |
| Msa1448820 | AT3G03670.1 | 43.202 | 331 | 166 | 7 | 4 | 331 | 10 | 321 | 6.97e-78 | 241 |
| Msa1448820 | AT5G19880.1 | 43.675 | 332 | 174 | 5 | 3 | 331 | 8 | 329 | 1.51e-77 | 241 |
| Msa1448820 | AT5G51890.1 | 42.553 | 329 | 171 | 10 | 8 | 331 | 7 | 322 | 1.75e-75 | 235 |
| Msa1448820 | AT1G05260.1 | 42.020 | 307 | 170 | 5 | 26 | 331 | 26 | 325 | 1.23e-73 | 231 |
| Msa1448820 | AT2G41480.1 | 43.492 | 315 | 160 | 8 | 23 | 331 | 26 | 328 | 8.01e-73 | 228 |
| Msa1448820 | AT3G21770.1 | 41.026 | 312 | 177 | 5 | 17 | 327 | 19 | 324 | 1.76e-72 | 228 |
| Msa1448820 | AT5G64120.1 | 43.377 | 302 | 159 | 5 | 30 | 331 | 39 | 328 | 3.37e-72 | 227 |
| Msa1448820 | AT4G33420.1 | 42.484 | 306 | 159 | 6 | 26 | 331 | 37 | 325 | 3.99e-72 | 226 |
| Msa1448820 | AT5G17820.1 | 42.053 | 302 | 159 | 6 | 30 | 331 | 28 | 313 | 9.36e-72 | 225 |
| Msa1448820 | AT4G33420.2 | 42.484 | 306 | 159 | 6 | 26 | 331 | 84 | 372 | 1.83e-71 | 226 |
| Msa1448820 | AT1G05240.1 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 2.85e-71 | 224 |
| Msa1448820 | AT1G05250.1 | 41.801 | 311 | 169 | 6 | 24 | 331 | 24 | 325 | 2.85e-71 | 224 |
| Msa1448820 | AT1G71695.1 | 40.984 | 305 | 164 | 6 | 26 | 327 | 44 | 335 | 8.00e-71 | 224 |
| Msa1448820 | AT5G17820.2 | 42.053 | 302 | 159 | 6 | 30 | 331 | 81 | 366 | 3.98e-70 | 223 |
| Msa1448820 | AT4G11290.1 | 39.039 | 333 | 194 | 6 | 1 | 331 | 1 | 326 | 7.80e-70 | 221 |
| Msa1448820 | AT5G15180.1 | 41.254 | 303 | 168 | 6 | 30 | 331 | 36 | 329 | 8.34e-70 | 221 |
| Msa1448820 | AT2G39040.1 | 42.581 | 310 | 169 | 5 | 26 | 331 | 46 | 350 | 4.79e-69 | 219 |
| Msa1448820 | AT5G42180.1 | 41.159 | 328 | 175 | 8 | 4 | 330 | 6 | 316 | 8.20e-68 | 215 |
| Msa1448820 | AT5G64110.1 | 41.141 | 333 | 185 | 5 | 1 | 331 | 7 | 330 | 1.55e-67 | 215 |
| Msa1448820 | AT4G26010.1 | 41.254 | 303 | 158 | 6 | 30 | 331 | 26 | 309 | 3.71e-67 | 213 |
| Msa1448820 | AT5G47000.1 | 39.355 | 310 | 174 | 5 | 25 | 331 | 32 | 330 | 4.53e-67 | 214 |
| Msa1448820 | AT4G26010.2 | 41.254 | 303 | 158 | 6 | 30 | 331 | 54 | 337 | 7.82e-67 | 213 |
| Msa1448820 | AT4G31760.1 | 39.385 | 325 | 184 | 5 | 7 | 331 | 15 | 326 | 8.90e-67 | 213 |
| Msa1448820 | AT3G28200.1 | 38.312 | 308 | 176 | 4 | 26 | 331 | 21 | 316 | 1.42e-66 | 212 |
| Msa1448820 | AT1G24110.1 | 40.656 | 305 | 170 | 6 | 26 | 327 | 22 | 318 | 1.89e-66 | 212 |
| Msa1448820 | AT5G39580.1 | 43.564 | 303 | 158 | 7 | 30 | 331 | 29 | 319 | 1.90e-66 | 212 |
| Msa1448820 | AT5G40150.1 | 39.286 | 308 | 174 | 5 | 26 | 331 | 32 | 328 | 1.16e-65 | 210 |
| Msa1448820 | AT4G37530.1 | 40.064 | 312 | 178 | 4 | 23 | 331 | 24 | 329 | 1.19e-64 | 207 |
| Msa1448820 | AT3G01190.1 | 40.968 | 310 | 171 | 7 | 23 | 331 | 23 | 321 | 1.57e-64 | 207 |
| Msa1448820 | AT4G17690.1 | 40.000 | 310 | 169 | 6 | 26 | 331 | 26 | 322 | 2.89e-64 | 206 |
| Msa1448820 | AT1G34510.1 | 40.717 | 307 | 162 | 6 | 26 | 331 | 22 | 309 | 3.16e-64 | 206 |
| Msa1448820 | AT4G37520.1 | 39.159 | 309 | 179 | 4 | 26 | 331 | 27 | 329 | 8.63e-64 | 205 |
| Msa1448820 | AT2G34060.1 | 41.424 | 309 | 168 | 7 | 26 | 328 | 42 | 343 | 2.73e-63 | 204 |
| Msa1448820 | AT2G18980.1 | 39.458 | 332 | 175 | 8 | 6 | 331 | 12 | 323 | 1.00e-62 | 202 |
| Msa1448820 | AT2G24800.1 | 40.323 | 310 | 170 | 6 | 26 | 331 | 31 | 329 | 7.63e-62 | 200 |
| Msa1448820 | AT4G37520.2 | 38.511 | 309 | 178 | 5 | 26 | 331 | 27 | 326 | 1.12e-60 | 197 |
| Msa1448820 | AT1G77100.1 | 40.717 | 307 | 162 | 7 | 30 | 331 | 28 | 319 | 1.49e-60 | 197 |
| Msa1448820 | AT4G25980.1 | 38.438 | 333 | 186 | 7 | 4 | 331 | 8 | 326 | 1.82e-60 | 197 |
| Msa1448820 | AT2G43480.1 | 39.617 | 313 | 170 | 8 | 26 | 331 | 35 | 335 | 3.94e-60 | 196 |
| Msa1448820 | AT4G33870.1 | 35.693 | 339 | 172 | 6 | 26 | 327 | 68 | 397 | 5.41e-60 | 197 |
| Msa1448820 | AT2G37130.2 | 37.013 | 308 | 176 | 6 | 29 | 331 | 2 | 296 | 7.43e-60 | 194 |
| Msa1448820 | AT2G37130.1 | 37.013 | 308 | 176 | 6 | 29 | 331 | 33 | 327 | 2.48e-59 | 194 |
| Msa1448820 | AT4G30170.1 | 38.535 | 314 | 176 | 8 | 23 | 331 | 24 | 325 | 6.09e-59 | 192 |
| Msa1448820 | AT5G14130.1 | 33.531 | 337 | 195 | 5 | 6 | 331 | 12 | 330 | 1.19e-58 | 192 |
| Msa1448820 | AT3G49960.1 | 36.970 | 330 | 197 | 6 | 6 | 331 | 7 | 329 | 3.25e-58 | 191 |
| Msa1448820 | AT5G24070.1 | 37.380 | 313 | 177 | 7 | 26 | 331 | 35 | 335 | 3.54e-58 | 191 |
| Msa1448820 | AT5G14130.2 | 33.531 | 337 | 195 | 5 | 6 | 331 | 53 | 371 | 4.16e-58 | 192 |
| Msa1448820 | AT5G64100.1 | 40.789 | 304 | 165 | 6 | 30 | 331 | 41 | 331 | 4.74e-58 | 191 |
| Msa1448820 | AT4G21960.1 | 37.742 | 310 | 176 | 5 | 26 | 331 | 31 | 327 | 1.86e-57 | 189 |
| Msa1448820 | AT5G67400.1 | 36.036 | 333 | 201 | 5 | 5 | 331 | 3 | 329 | 2.33e-56 | 186 |
| Msa1448820 | AT1G30870.1 | 39.355 | 310 | 171 | 8 | 25 | 331 | 50 | 345 | 5.40e-56 | 186 |
| Msa1448820 | AT3G17070.1 | 36.190 | 315 | 183 | 9 | 24 | 331 | 36 | 339 | 5.45e-55 | 183 |
| Msa1448820 | AT4G37530.2 | 39.382 | 259 | 151 | 3 | 23 | 278 | 24 | 279 | 4.45e-51 | 171 |
| Msa1448820 | AT5G22410.1 | 33.234 | 334 | 201 | 10 | 1 | 328 | 5 | 322 | 3.07e-49 | 167 |
| Msa1448820 | AT5G39580.2 | 46.597 | 191 | 94 | 5 | 30 | 217 | 29 | 214 | 2.82e-42 | 147 |
| Msa1448820 | AT3G17070.2 | 33.684 | 285 | 170 | 10 | 54 | 331 | 4 | 276 | 7.18e-40 | 142 |
| Msa1448820 | AT4G25980.2 | 43.158 | 190 | 100 | 4 | 4 | 193 | 53 | 234 | 9.10e-40 | 142 |
| Msa1448820 | AT2G24800.2 | 44.910 | 167 | 88 | 2 | 26 | 192 | 31 | 193 | 1.73e-36 | 132 |
| Msa1448820 | AT3G42570.1 | 35.135 | 148 | 81 | 4 | 46 | 191 | 13 | 147 | 1.62e-15 | 73.2 |
| Msa1448820 | AT4G32320.1 | 26.667 | 270 | 122 | 7 | 57 | 312 | 114 | 321 | 1.56e-12 | 67.8 |
Find 76 sgRNAs with CRISPR-Local
Find 238 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGCCTCTAAAGATGAATT+TGG | 0.209973 | tig0032336:-23084 | None:intergenic |
| GGAAATATTAATGTTCTTAC+TGG | 0.240350 | tig0032336:+23886 | Msa1448820:CDS |
| TGCTCCAAATTCATCTTTAG+AGG | 0.250110 | tig0032336:+23080 | Msa1448820:CDS |
| AAGGATTAGGAGGCAGGTTT+GGG | 0.252670 | tig0032336:+23804 | Msa1448820:CDS |
| TTGTCATCCCTTCCGGTAAT+AGG | 0.256822 | tig0032336:-23661 | None:intergenic |
| GAAGGATTAGGAGGCAGGTT+TGG | 0.274461 | tig0032336:+23803 | Msa1448820:CDS |
| TGTCCAATATTCACACTCTA+AGG | 0.278407 | tig0032336:+22153 | Msa1448820:CDS |
| CCACGTAAAGAGTTCAAATT+TGG | 0.287872 | tig0032336:-22583 | None:intergenic |
| GTGCGATGCATCGGTACTTT+TGG | 0.290206 | tig0032336:+22522 | Msa1448820:CDS |
| ATTGAAGGAAAAGGCTTGTT+AGG | 0.300624 | tig0032336:+23745 | Msa1448820:CDS |
| GAAGACCTTGTGGTTCTATC+AGG | 0.316631 | tig0032336:+23141 | Msa1448820:CDS |
| ACCAAGATGGGATGTGTGGC+TGG | 0.353196 | tig0032336:+23005 | Msa1448820:CDS |
| TGCAAATTTGTCATCCCTTC+CGG | 0.355868 | tig0032336:-23668 | None:intergenic |
| AATTTGGAGCAGGGATGAAT+AGG | 0.364651 | tig0032336:-23068 | None:intergenic |
| GGGCAAGATGTTTAAGCTTC+CGG | 0.371613 | tig0032336:+23545 | Msa1448820:CDS |
| TATTGATTATCAAACCGTTT+TGG | 0.372482 | tig0032336:-23709 | None:intergenic |
| TTGTAGATTTGTCAACCCTT+AGG | 0.373734 | tig0032336:+23933 | Msa1448820:CDS |
| ACACCTTAGAGTGTGAATAT+TGG | 0.388942 | tig0032336:-22156 | None:intergenic |
| ATAAACATTATTGAAGGAAA+AGG | 0.389138 | tig0032336:+23736 | Msa1448820:CDS |
| AAGACTTTGATGGAAGGATT+AGG | 0.406088 | tig0032336:+23791 | Msa1448820:CDS |
| ATCTTGCCCTTCCTATTGTA+TGG | 0.411212 | tig0032336:-23531 | None:intergenic |
| TGCCAAGTCTATGATTAAGA+TGG | 0.412611 | tig0032336:+23864 | Msa1448820:CDS |
| CCTTCCGGTAATAGGACATA+TGG | 0.429530 | tig0032336:-23653 | None:intergenic |
| TTGATCAGTCAAGACTTTGA+TGG | 0.433237 | tig0032336:+23781 | Msa1448820:CDS |
| CGGTCCATATGTCCTATTAC+CGG | 0.433238 | tig0032336:+23649 | Msa1448820:CDS |
| TGCTCGTGATGCTGTTGAAT+TGG | 0.436779 | tig0032336:+22690 | Msa1448820:CDS |
| TGTAGATTTGTCAACCCTTA+GGG | 0.445313 | tig0032336:+23934 | Msa1448820:CDS |
| CCCAGCCACACATCCCATCT+TGG | 0.449198 | tig0032336:-23006 | None:intergenic |
| GATGTTTAAGCTTCCGGCAG+AGG | 0.454660 | tig0032336:+23551 | Msa1448820:CDS |
| TGATGGAAGGATTAGGAGGC+AGG | 0.457704 | tig0032336:+23798 | Msa1448820:CDS |
| TACTTCATAAACATTATTGA+AGG | 0.460027 | tig0032336:+23730 | Msa1448820:CDS |
| GATAAAGTATTTACTTGAAG+AGG | 0.463873 | tig0032336:+22624 | Msa1448820:CDS |
| GGATGTGTGGCTGGGGAGGA+AGG | 0.466895 | tig0032336:+23014 | Msa1448820:CDS |
| AAAACAGGTAGCCATACAAT+AGG | 0.468505 | tig0032336:+23520 | Msa1448820:intron |
| CAAGATGGGATGTGTGGCTG+GGG | 0.483675 | tig0032336:+23007 | Msa1448820:CDS |
| GCCAAGTCTATGATTAAGAT+GGG | 0.486687 | tig0032336:+23865 | Msa1448820:CDS |
| TCCCATCTTAATCATAGACT+TGG | 0.488095 | tig0032336:-23866 | None:intergenic |
| CCAAGATGGGATGTGTGGCT+GGG | 0.493544 | tig0032336:+23006 | Msa1448820:CDS |
| TCTAAAGATGAATTTGGAGC+AGG | 0.507269 | tig0032336:-23078 | None:intergenic |
| TTACCATAACAAAACAATCA+TGG | 0.512399 | tig0032336:-22307 | None:intergenic |
| TGAAGAGAGGAGGACCAAGA+TGG | 0.516172 | tig0032336:+22992 | Msa1448820:intron |
| TCTCACAGTGTCTTCAGCTA+AGG | 0.516840 | tig0032336:-22219 | None:intergenic |
| GAAGTGAAGGTGAAATAAGA+AGG | 0.517168 | tig0032336:+23908 | Msa1448820:CDS |
| ATGTGCTGATATTCTTGCAA+TGG | 0.525272 | tig0032336:+22666 | Msa1448820:CDS |
| CCAAATTTGAACTCTTTACG+TGG | 0.530593 | tig0032336:+22583 | Msa1448820:CDS |
| CTCCACTGAAACTTGACTCA+AGG | 0.531127 | tig0032336:-23041 | None:intergenic |
| GATGGGATGTGTGGCTGGGG+AGG | 0.531399 | tig0032336:+23010 | Msa1448820:CDS |
| ATGACAAGTGAGAAAGAAGC+TGG | 0.532451 | tig0032336:+22559 | Msa1448820:CDS |
| TCTTGTTCATGATTACTACA+AGG | 0.533843 | tig0032336:+22187 | Msa1448820:CDS |
| GAAGAGAGGAGGACCAAGAT+GGG | 0.542771 | tig0032336:+22993 | Msa1448820:intron |
| TGGAGCAGGGATGAATAGGT+TGG | 0.552780 | tig0032336:-23064 | None:intergenic |
| TCCCTTGAGTCAAGTTTCAG+TGG | 0.555521 | tig0032336:+23039 | Msa1448820:CDS |
| CTCACAGTGTCTTCAGCTAA+GGG | 0.559993 | tig0032336:-22218 | None:intergenic |
| ATATAAGGGGTGCGATGCAT+CGG | 0.563534 | tig0032336:+22513 | Msa1448820:intron |
| CAGGTAGCCATACAATAGGA+AGG | 0.566465 | tig0032336:+23524 | Msa1448820:intron |
| AATGTTCTTACTGGAAGTGA+AGG | 0.567607 | tig0032336:+23895 | Msa1448820:CDS |
| TCCACTGAAACTTGACTCAA+GGG | 0.577180 | tig0032336:-23040 | None:intergenic |
| TCAGTCAAGACTTTGATGGA+AGG | 0.590453 | tig0032336:+23785 | Msa1448820:CDS |
| TTGTTTCATAGATCCTCTGC+CGG | 0.599925 | tig0032336:-23564 | None:intergenic |
| AGGATTAGGAGGCAGGTTTG+GGG | 0.605235 | tig0032336:+23805 | Msa1448820:CDS |
| ACTTTGATGGAAGGATTAGG+AGG | 0.606364 | tig0032336:+23794 | Msa1448820:CDS |
| CCATATGTCCTATTACCGGA+AGG | 0.607440 | tig0032336:+23653 | Msa1448820:CDS |
| CTAAAGATGAATTTGGAGCA+GGG | 0.616673 | tig0032336:-23077 | None:intergenic |
| TCTGGATATTGAAGACCTTG+TGG | 0.629490 | tig0032336:+23131 | Msa1448820:CDS |
| AGTAGTGATGCTGCTAAACG+TGG | 0.631187 | tig0032336:-22272 | None:intergenic |
| TTTGGTGTTTGAAAATCAAG+GGG | 0.635113 | tig0032336:-23691 | None:intergenic |
| GGACCGTAGGACTCTTCTGA+AGG | 0.636543 | tig0032336:-23632 | None:intergenic |
| AGGTAGCCATACAATAGGAA+GGG | 0.640344 | tig0032336:+23525 | Msa1448820:intron |
| CATATGTCCTATTACCGGAA+GGG | 0.646460 | tig0032336:+23654 | Msa1448820:CDS |
| AAGATCAGTAATAGTCTCAG+AGG | 0.648692 | tig0032336:-22119 | None:intergenic |
| TAATAGGACATATGGACCGT+AGG | 0.650725 | tig0032336:-23645 | None:intergenic |
| CAACCTTCAGAAGAGTCCTA+CGG | 0.678058 | tig0032336:+23629 | Msa1448820:CDS |
| GAGGACCAAGATGGGATGTG+TGG | 0.689019 | tig0032336:+23001 | Msa1448820:CDS |
| TCAGCACATGAAACAGTGAG+AGG | 0.713764 | tig0032336:-22652 | None:intergenic |
| CACTGTGAGACATAACGTAG+CGG | 0.729926 | tig0032336:+22232 | Msa1448820:CDS |
| ATATACCTGATAGAACCACA+AGG | 0.769483 | tig0032336:-23146 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTGAAAATGAATATAA+GGG | + | tig0032336:22499-22518 | Msa1448820:intron | 15.0% |
| !! | AAAAAACATTGTTTATTTCA+TGG | - | tig0032336:22955-22974 | None:intergenic | 15.0% |
| !!! | AATTAATAATTTTAAGCAAC+AGG | + | tig0032336:23107-23126 | Msa1448820:CDS | 15.0% |
| !!! | ATTAATAATTTTAAGCAACA+GGG | + | tig0032336:23108-23127 | Msa1448820:CDS | 15.0% |
| !!! | TGACAGTTTTAAATAAAATT+TGG | - | tig0032336:23365-23384 | None:intergenic | 15.0% |
| !! | TTCTTACTAATTAATTAGAA+GGG | + | tig0032336:23493-23512 | Msa1448820:intron | 15.0% |
| !! | ATTGTTGAAAATGAATATAA+GGG | + | tig0032336:22499-22518 | Msa1448820:intron | 15.0% |
| !! | AAAAAACATTGTTTATTTCA+TGG | - | tig0032336:22955-22974 | None:intergenic | 15.0% |
| !!! | AATTAATAATTTTAAGCAAC+AGG | + | tig0032336:23107-23126 | Msa1448820:CDS | 15.0% |
| !!! | ATTAATAATTTTAAGCAACA+GGG | + | tig0032336:23108-23127 | Msa1448820:CDS | 15.0% |
| !!! | TGACAGTTTTAAATAAAATT+TGG | - | tig0032336:23365-23384 | None:intergenic | 15.0% |
| !! | TTCTTACTAATTAATTAGAA+GGG | + | tig0032336:23493-23512 | Msa1448820:intron | 15.0% |
| !! | GATTGTTGAAAATGAATATA+AGG | + | tig0032336:22498-22517 | Msa1448820:intron | 20.0% |
| !! | TTGTTGAAAATGAATATAAG+GGG | + | tig0032336:22500-22519 | Msa1448820:intron | 20.0% |
| !! | AATATTACTACATTGTTCAT+AGG | + | tig0032336:22925-22944 | Msa1448820:intron | 20.0% |
| !! | ATATTACTACATTGTTCATA+GGG | + | tig0032336:22926-22945 | Msa1448820:intron | 20.0% |
| !!! | TACAATTTTTTGGACTAAAT+TGG | - | tig0032336:23204-23223 | None:intergenic | 20.0% |
| !! | AATTTAGTCCAAAAAATTGT+AGG | + | tig0032336:23203-23222 | Msa1448820:intron | 20.0% |
| !! | ATTTAGTCCAAAAAATTGTA+GGG | + | tig0032336:23204-23223 | Msa1448820:intron | 20.0% |
| !! | TGTATTGAATCAAGATAATT+TGG | - | tig0032336:23295-23314 | None:intergenic | 20.0% |
| !! | GTTCTTACTAATTAATTAGA+AGG | + | tig0032336:23492-23511 | Msa1448820:intron | 20.0% |
| !! | TCTTACTAATTAATTAGAAG+GGG | + | tig0032336:23494-23513 | Msa1448820:intron | 20.0% |
| !! | TACTTCATAAACATTATTGA+AGG | + | tig0032336:23730-23749 | Msa1448820:CDS | 20.0% |
| !! | ATAAACATTATTGAAGGAAA+AGG | + | tig0032336:23736-23755 | Msa1448820:CDS | 20.0% |
| !!! | AAAGAAAAGTTTTTCATTAG+AGG | - | tig0032336:23836-23855 | None:intergenic | 20.0% |
| !! | GATTGTTGAAAATGAATATA+AGG | + | tig0032336:22498-22517 | Msa1448820:intron | 20.0% |
| !! | TTGTTGAAAATGAATATAAG+GGG | + | tig0032336:22500-22519 | Msa1448820:intron | 20.0% |
| !! | AATATTACTACATTGTTCAT+AGG | + | tig0032336:22925-22944 | Msa1448820:intron | 20.0% |
| !! | ATATTACTACATTGTTCATA+GGG | + | tig0032336:22926-22945 | Msa1448820:intron | 20.0% |
| !!! | TACAATTTTTTGGACTAAAT+TGG | - | tig0032336:23204-23223 | None:intergenic | 20.0% |
| !! | AATTTAGTCCAAAAAATTGT+AGG | + | tig0032336:23203-23222 | Msa1448820:intron | 20.0% |
| !! | ATTTAGTCCAAAAAATTGTA+GGG | + | tig0032336:23204-23223 | Msa1448820:intron | 20.0% |
| !! | TGTATTGAATCAAGATAATT+TGG | - | tig0032336:23295-23314 | None:intergenic | 20.0% |
| !! | GTTCTTACTAATTAATTAGA+AGG | + | tig0032336:23492-23511 | Msa1448820:intron | 20.0% |
| !! | TCTTACTAATTAATTAGAAG+GGG | + | tig0032336:23494-23513 | Msa1448820:intron | 20.0% |
| !! | TACTTCATAAACATTATTGA+AGG | + | tig0032336:23730-23749 | Msa1448820:CDS | 20.0% |
| !! | ATAAACATTATTGAAGGAAA+AGG | + | tig0032336:23736-23755 | Msa1448820:CDS | 20.0% |
| !!! | AAAGAAAAGTTTTTCATTAG+AGG | - | tig0032336:23836-23855 | None:intergenic | 20.0% |
| ! | TTACCATAACAAAACAATCA+TGG | - | tig0032336:22310-22329 | None:intergenic | 25.0% |
| ! | TTAATGAAAACTTGAAATGC+TGG | - | tig0032336:22337-22356 | None:intergenic | 25.0% |
| !! | GATAAAGTATTTACTTGAAG+AGG | + | tig0032336:22624-22643 | Msa1448820:CDS | 25.0% |
| ! | GAGTTCGGTTATTAAAAAAT+TGG | - | tig0032336:22769-22788 | None:intergenic | 25.0% |
| !! | TGTTTTACCCTACAATTTTT+TGG | - | tig0032336:23214-23233 | None:intergenic | 25.0% |
| ! | CTTACTAATTAATTAGAAGG+GGG | + | tig0032336:23495-23514 | Msa1448820:intron | 25.0% |
| !!! | TTTTGGTGTTTGAAAATCAA+GGG | - | tig0032336:23695-23714 | None:intergenic | 25.0% |
| !! | TTGATTTTCAAACACCAAAA+CGG | + | tig0032336:23695-23714 | Msa1448820:CDS | 25.0% |
| !!! | TATTGATTATCAAACCGTTT+TGG | - | tig0032336:23712-23731 | None:intergenic | 25.0% |
| ! | GGAAATATTAATGTTCTTAC+TGG | + | tig0032336:23886-23905 | Msa1448820:CDS | 25.0% |
| ! | TTACCATAACAAAACAATCA+TGG | - | tig0032336:22310-22329 | None:intergenic | 25.0% |
| ! | TTAATGAAAACTTGAAATGC+TGG | - | tig0032336:22337-22356 | None:intergenic | 25.0% |
| !! | GATAAAGTATTTACTTGAAG+AGG | + | tig0032336:22624-22643 | Msa1448820:CDS | 25.0% |
| ! | GAGTTCGGTTATTAAAAAAT+TGG | - | tig0032336:22769-22788 | None:intergenic | 25.0% |
| !! | TGTTTTACCCTACAATTTTT+TGG | - | tig0032336:23214-23233 | None:intergenic | 25.0% |
| ! | CTTACTAATTAATTAGAAGG+GGG | + | tig0032336:23495-23514 | Msa1448820:intron | 25.0% |
| !!! | TTTTGGTGTTTGAAAATCAA+GGG | - | tig0032336:23695-23714 | None:intergenic | 25.0% |
| !! | TTGATTTTCAAACACCAAAA+CGG | + | tig0032336:23695-23714 | Msa1448820:CDS | 25.0% |
| !!! | TATTGATTATCAAACCGTTT+TGG | - | tig0032336:23712-23731 | None:intergenic | 25.0% |
| ! | GGAAATATTAATGTTCTTAC+TGG | + | tig0032336:23886-23905 | Msa1448820:CDS | 25.0% |
| TCTTGTTCATGATTACTACA+AGG | + | tig0032336:22187-22206 | Msa1448820:CDS | 30.0% | |
| !! | CTTCCATGATTGTTTTGTTA+TGG | + | tig0032336:22304-22323 | Msa1448820:CDS | 30.0% |
| ACAATAATTGAAAACACCAG+AGG | - | tig0032336:22442-22461 | None:intergenic | 30.0% | |
| AGAAAAAGAGTAGAGAGAAA+AGG | - | tig0032336:22728-22747 | None:intergenic | 30.0% | |
| ! | TTCTCTCTACTCTTTTTCTT+TGG | + | tig0032336:22729-22748 | Msa1448820:intron | 30.0% |
| ATTGATTGAACTGTTCAGTT+CGG | + | tig0032336:22863-22882 | Msa1448820:intron | 30.0% | |
| CTGCTATTAACTAGTTCAAT+TGG | + | tig0032336:22902-22921 | Msa1448820:intron | 30.0% | |
| !!! | CTATTGTTTGTTTTGAAGAG+AGG | + | tig0032336:22979-22998 | Msa1448820:intron | 30.0% |
| ! | AAAGCCTCTAAAGATGAATT+TGG | - | tig0032336:23087-23106 | None:intergenic | 30.0% |
| !! | TTTGGTGTTTGAAAATCAAG+GGG | - | tig0032336:23694-23713 | None:intergenic | 30.0% |
| !!! | GTTTTGGTGTTTGAAAATCA+AGG | - | tig0032336:23696-23715 | None:intergenic | 30.0% |
| TCTTGTTCATGATTACTACA+AGG | + | tig0032336:22187-22206 | Msa1448820:CDS | 30.0% | |
| !! | CTTCCATGATTGTTTTGTTA+TGG | + | tig0032336:22304-22323 | Msa1448820:CDS | 30.0% |
| ACAATAATTGAAAACACCAG+AGG | - | tig0032336:22442-22461 | None:intergenic | 30.0% | |
| AGAAAAAGAGTAGAGAGAAA+AGG | - | tig0032336:22728-22747 | None:intergenic | 30.0% | |
| ! | TTCTCTCTACTCTTTTTCTT+TGG | + | tig0032336:22729-22748 | Msa1448820:intron | 30.0% |
| ATTGATTGAACTGTTCAGTT+CGG | + | tig0032336:22863-22882 | Msa1448820:intron | 30.0% | |
| CTGCTATTAACTAGTTCAAT+TGG | + | tig0032336:22902-22921 | Msa1448820:intron | 30.0% | |
| !!! | CTATTGTTTGTTTTGAAGAG+AGG | + | tig0032336:22979-22998 | Msa1448820:intron | 30.0% |
| ! | AAAGCCTCTAAAGATGAATT+TGG | - | tig0032336:23087-23106 | None:intergenic | 30.0% |
| !! | TTTGGTGTTTGAAAATCAAG+GGG | - | tig0032336:23694-23713 | None:intergenic | 30.0% |
| !!! | GTTTTGGTGTTTGAAAATCA+AGG | - | tig0032336:23696-23715 | None:intergenic | 30.0% |
| AAGATCAGTAATAGTCTCAG+AGG | - | tig0032336:22122-22141 | None:intergenic | 35.0% | |
| TGTCCAATATTCACACTCTA+AGG | + | tig0032336:22153-22172 | Msa1448820:CDS | 35.0% | |
| ACACCTTAGAGTGTGAATAT+TGG | - | tig0032336:22159-22178 | None:intergenic | 35.0% | |
| CCACGTAAAGAGTTCAAATT+TGG | - | tig0032336:22586-22605 | None:intergenic | 35.0% | |
| CCAAATTTGAACTCTTTACG+TGG | + | tig0032336:22583-22602 | Msa1448820:CDS | 35.0% | |
| ! | ATGTGCTGATATTCTTGCAA+TGG | + | tig0032336:22666-22685 | Msa1448820:CDS | 35.0% |
| TTTACTGCTGTTCGGTTATT+TGG | - | tig0032336:22826-22845 | None:intergenic | 35.0% | |
| AACTGACATTTACTGCTGTT+CGG | - | tig0032336:22834-22853 | None:intergenic | 35.0% | |
| !!! | TTGTTTGTTTTGAAGAGAGG+AGG | + | tig0032336:22982-23001 | Msa1448820:intron | 35.0% |
| ! | CTAAAGATGAATTTGGAGCA+GGG | - | tig0032336:23080-23099 | None:intergenic | 35.0% |
| ! | TCTAAAGATGAATTTGGAGC+AGG | - | tig0032336:23081-23100 | None:intergenic | 35.0% |
| TGCTCCAAATTCATCTTTAG+AGG | + | tig0032336:23080-23099 | Msa1448820:CDS | 35.0% | |
| ! | TAATTTTAAGCAACAGGGTC+TGG | + | tig0032336:23113-23132 | Msa1448820:CDS | 35.0% |
| ATATACCTGATAGAACCACA+AGG | - | tig0032336:23149-23168 | None:intergenic | 35.0% | |
| AATTAGAAGGGGGAAAAAAC+AGG | + | tig0032336:23505-23524 | Msa1448820:intron | 35.0% | |
| AAAACAGGTAGCCATACAAT+AGG | + | tig0032336:23520-23539 | Msa1448820:intron | 35.0% | |
| ! | ATTGAAGGAAAAGGCTTGTT+AGG | + | tig0032336:23745-23764 | Msa1448820:CDS | 35.0% |
| TTGATCAGTCAAGACTTTGA+TGG | + | tig0032336:23781-23800 | Msa1448820:CDS | 35.0% | |
| AAGACTTTGATGGAAGGATT+AGG | + | tig0032336:23791-23810 | Msa1448820:CDS | 35.0% | |
| TGCCAAGTCTATGATTAAGA+TGG | + | tig0032336:23864-23883 | Msa1448820:CDS | 35.0% | |
| GCCAAGTCTATGATTAAGAT+GGG | + | tig0032336:23865-23884 | Msa1448820:CDS | 35.0% | |
| TCCCATCTTAATCATAGACT+TGG | - | tig0032336:23869-23888 | None:intergenic | 35.0% | |
| AATGTTCTTACTGGAAGTGA+AGG | + | tig0032336:23895-23914 | Msa1448820:CDS | 35.0% | |
| GAAGTGAAGGTGAAATAAGA+AGG | + | tig0032336:23908-23927 | Msa1448820:CDS | 35.0% | |
| AAGATCAGTAATAGTCTCAG+AGG | - | tig0032336:22122-22141 | None:intergenic | 35.0% | |
| TGTCCAATATTCACACTCTA+AGG | + | tig0032336:22153-22172 | Msa1448820:CDS | 35.0% | |
| ACACCTTAGAGTGTGAATAT+TGG | - | tig0032336:22159-22178 | None:intergenic | 35.0% | |
| CCACGTAAAGAGTTCAAATT+TGG | - | tig0032336:22586-22605 | None:intergenic | 35.0% | |
| CCAAATTTGAACTCTTTACG+TGG | + | tig0032336:22583-22602 | Msa1448820:CDS | 35.0% | |
| ! | ATGTGCTGATATTCTTGCAA+TGG | + | tig0032336:22666-22685 | Msa1448820:CDS | 35.0% |
| TTTACTGCTGTTCGGTTATT+TGG | - | tig0032336:22826-22845 | None:intergenic | 35.0% | |
| AACTGACATTTACTGCTGTT+CGG | - | tig0032336:22834-22853 | None:intergenic | 35.0% | |
| !!! | TTGTTTGTTTTGAAGAGAGG+AGG | + | tig0032336:22982-23001 | Msa1448820:intron | 35.0% |
| ! | CTAAAGATGAATTTGGAGCA+GGG | - | tig0032336:23080-23099 | None:intergenic | 35.0% |
| ! | TCTAAAGATGAATTTGGAGC+AGG | - | tig0032336:23081-23100 | None:intergenic | 35.0% |
| TGCTCCAAATTCATCTTTAG+AGG | + | tig0032336:23080-23099 | Msa1448820:CDS | 35.0% | |
| ! | TAATTTTAAGCAACAGGGTC+TGG | + | tig0032336:23113-23132 | Msa1448820:CDS | 35.0% |
| ATATACCTGATAGAACCACA+AGG | - | tig0032336:23149-23168 | None:intergenic | 35.0% | |
| AATTAGAAGGGGGAAAAAAC+AGG | + | tig0032336:23505-23524 | Msa1448820:intron | 35.0% | |
| AAAACAGGTAGCCATACAAT+AGG | + | tig0032336:23520-23539 | Msa1448820:intron | 35.0% | |
| ! | ATTGAAGGAAAAGGCTTGTT+AGG | + | tig0032336:23745-23764 | Msa1448820:CDS | 35.0% |
| TTGATCAGTCAAGACTTTGA+TGG | + | tig0032336:23781-23800 | Msa1448820:CDS | 35.0% | |
| AAGACTTTGATGGAAGGATT+AGG | + | tig0032336:23791-23810 | Msa1448820:CDS | 35.0% | |
| TGCCAAGTCTATGATTAAGA+TGG | + | tig0032336:23864-23883 | Msa1448820:CDS | 35.0% | |
| GCCAAGTCTATGATTAAGAT+GGG | + | tig0032336:23865-23884 | Msa1448820:CDS | 35.0% | |
| TCCCATCTTAATCATAGACT+TGG | - | tig0032336:23869-23888 | None:intergenic | 35.0% | |
| AATGTTCTTACTGGAAGTGA+AGG | + | tig0032336:23895-23914 | Msa1448820:CDS | 35.0% | |
| GAAGTGAAGGTGAAATAAGA+AGG | + | tig0032336:23908-23927 | Msa1448820:CDS | 35.0% | |
| !! | GTACTTTTGGACAGTGTTGA+GGG | + | tig0032336:22535-22554 | Msa1448820:CDS | 40.0% |
| ATGACAAGTGAGAAAGAAGC+TGG | + | tig0032336:22559-22578 | Msa1448820:CDS | 40.0% | |
| ! | TGTTCGGTTATTTGGTGACT+CGG | - | tig0032336:22818-22837 | None:intergenic | 40.0% |
| TCCACTGAAACTTGACTCAA+GGG | - | tig0032336:23043-23062 | None:intergenic | 40.0% | |
| ! | AATTTGGAGCAGGGATGAAT+AGG | - | tig0032336:23071-23090 | None:intergenic | 40.0% |
| TCTGGATATTGAAGACCTTG+TGG | + | tig0032336:23131-23150 | Msa1448820:CDS | 40.0% | |
| AGGTAGCCATACAATAGGAA+GGG | + | tig0032336:23525-23544 | Msa1448820:intron | 40.0% | |
| ATCTTGCCCTTCCTATTGTA+TGG | - | tig0032336:23534-23553 | None:intergenic | 40.0% | |
| TTGTTTCATAGATCCTCTGC+CGG | - | tig0032336:23567-23586 | None:intergenic | 40.0% | |
| TAATAGGACATATGGACCGT+AGG | - | tig0032336:23648-23667 | None:intergenic | 40.0% | |
| CATATGTCCTATTACCGGAA+GGG | + | tig0032336:23654-23673 | Msa1448820:CDS | 40.0% | |
| TGCAAATTTGTCATCCCTTC+CGG | - | tig0032336:23671-23690 | None:intergenic | 40.0% | |
| TCAGTCAAGACTTTGATGGA+AGG | + | tig0032336:23785-23804 | Msa1448820:CDS | 40.0% | |
| ACTTTGATGGAAGGATTAGG+AGG | + | tig0032336:23794-23813 | Msa1448820:CDS | 40.0% | |
| !! | GTACTTTTGGACAGTGTTGA+GGG | + | tig0032336:22535-22554 | Msa1448820:CDS | 40.0% |
| ATGACAAGTGAGAAAGAAGC+TGG | + | tig0032336:22559-22578 | Msa1448820:CDS | 40.0% | |
| ! | TGTTCGGTTATTTGGTGACT+CGG | - | tig0032336:22818-22837 | None:intergenic | 40.0% |
| TCCACTGAAACTTGACTCAA+GGG | - | tig0032336:23043-23062 | None:intergenic | 40.0% | |
| ! | AATTTGGAGCAGGGATGAAT+AGG | - | tig0032336:23071-23090 | None:intergenic | 40.0% |
| TCTGGATATTGAAGACCTTG+TGG | + | tig0032336:23131-23150 | Msa1448820:CDS | 40.0% | |
| AGGTAGCCATACAATAGGAA+GGG | + | tig0032336:23525-23544 | Msa1448820:intron | 40.0% | |
| ATCTTGCCCTTCCTATTGTA+TGG | - | tig0032336:23534-23553 | None:intergenic | 40.0% | |
| TTGTTTCATAGATCCTCTGC+CGG | - | tig0032336:23567-23586 | None:intergenic | 40.0% | |
| TAATAGGACATATGGACCGT+AGG | - | tig0032336:23648-23667 | None:intergenic | 40.0% | |
| CATATGTCCTATTACCGGAA+GGG | + | tig0032336:23654-23673 | Msa1448820:CDS | 40.0% | |
| TGCAAATTTGTCATCCCTTC+CGG | - | tig0032336:23671-23690 | None:intergenic | 40.0% | |
| TCAGTCAAGACTTTGATGGA+AGG | + | tig0032336:23785-23804 | Msa1448820:CDS | 40.0% | |
| ACTTTGATGGAAGGATTAGG+AGG | + | tig0032336:23794-23813 | Msa1448820:CDS | 40.0% | |
| CTCACAGTGTCTTCAGCTAA+GGG | - | tig0032336:22221-22240 | None:intergenic | 45.0% | |
| TCTCACAGTGTCTTCAGCTA+AGG | - | tig0032336:22222-22241 | None:intergenic | 45.0% | |
| CACTGTGAGACATAACGTAG+CGG | + | tig0032336:22232-22251 | Msa1448820:CDS | 45.0% | |
| AGTAGTGATGCTGCTAAACG+TGG | - | tig0032336:22275-22294 | None:intergenic | 45.0% | |
| ! | ATATAAGGGGTGCGATGCAT+CGG | + | tig0032336:22513-22532 | Msa1448820:intron | 45.0% |
| ! | GGTACTTTTGGACAGTGTTG+AGG | + | tig0032336:22534-22553 | Msa1448820:CDS | 45.0% |
| TCAGCACATGAAACAGTGAG+AGG | - | tig0032336:22655-22674 | None:intergenic | 45.0% | |
| TGCTCGTGATGCTGTTGAAT+TGG | + | tig0032336:22690-22709 | Msa1448820:CDS | 45.0% | |
| TTGCAGTTCGATGTCGAGTT+CGG | - | tig0032336:22784-22803 | None:intergenic | 45.0% | |
| !! | GTTATTTGGTGACTCGGTCA+TGG | - | tig0032336:22812-22831 | None:intergenic | 45.0% |
| TCCCTTGAGTCAAGTTTCAG+TGG | + | tig0032336:23039-23058 | Msa1448820:CDS | 45.0% | |
| CTCCACTGAAACTTGACTCA+AGG | - | tig0032336:23044-23063 | None:intergenic | 45.0% | |
| ! | GAAGACCTTGTGGTTCTATC+AGG | + | tig0032336:23141-23160 | Msa1448820:CDS | 45.0% |
| CAGGTAGCCATACAATAGGA+AGG | + | tig0032336:23524-23543 | Msa1448820:intron | 45.0% | |
| GGGCAAGATGTTTAAGCTTC+CGG | + | tig0032336:23545-23564 | Msa1448820:CDS | 45.0% | |
| CAACCTTCAGAAGAGTCCTA+CGG | + | tig0032336:23629-23648 | Msa1448820:CDS | 45.0% | |
| CGGTCCATATGTCCTATTAC+CGG | + | tig0032336:23649-23668 | Msa1448820:CDS | 45.0% | |
| CCTTCCGGTAATAGGACATA+TGG | - | tig0032336:23656-23675 | None:intergenic | 45.0% | |
| CCATATGTCCTATTACCGGA+AGG | + | tig0032336:23653-23672 | Msa1448820:CDS | 45.0% | |
| TTGTCATCCCTTCCGGTAAT+AGG | - | tig0032336:23664-23683 | None:intergenic | 45.0% | |
| AAGGATTAGGAGGCAGGTTT+GGG | + | tig0032336:23804-23823 | Msa1448820:CDS | 45.0% | |
| CTCACAGTGTCTTCAGCTAA+GGG | - | tig0032336:22221-22240 | None:intergenic | 45.0% | |
| TCTCACAGTGTCTTCAGCTA+AGG | - | tig0032336:22222-22241 | None:intergenic | 45.0% | |
| CACTGTGAGACATAACGTAG+CGG | + | tig0032336:22232-22251 | Msa1448820:CDS | 45.0% | |
| AGTAGTGATGCTGCTAAACG+TGG | - | tig0032336:22275-22294 | None:intergenic | 45.0% | |
| ! | ATATAAGGGGTGCGATGCAT+CGG | + | tig0032336:22513-22532 | Msa1448820:intron | 45.0% |
| ! | GGTACTTTTGGACAGTGTTG+AGG | + | tig0032336:22534-22553 | Msa1448820:CDS | 45.0% |
| TCAGCACATGAAACAGTGAG+AGG | - | tig0032336:22655-22674 | None:intergenic | 45.0% | |
| TGCTCGTGATGCTGTTGAAT+TGG | + | tig0032336:22690-22709 | Msa1448820:CDS | 45.0% | |
| TTGCAGTTCGATGTCGAGTT+CGG | - | tig0032336:22784-22803 | None:intergenic | 45.0% | |
| !! | GTTATTTGGTGACTCGGTCA+TGG | - | tig0032336:22812-22831 | None:intergenic | 45.0% |
| TCCCTTGAGTCAAGTTTCAG+TGG | + | tig0032336:23039-23058 | Msa1448820:CDS | 45.0% | |
| CTCCACTGAAACTTGACTCA+AGG | - | tig0032336:23044-23063 | None:intergenic | 45.0% | |
| ! | GAAGACCTTGTGGTTCTATC+AGG | + | tig0032336:23141-23160 | Msa1448820:CDS | 45.0% |
| CAGGTAGCCATACAATAGGA+AGG | + | tig0032336:23524-23543 | Msa1448820:intron | 45.0% | |
| GGGCAAGATGTTTAAGCTTC+CGG | + | tig0032336:23545-23564 | Msa1448820:CDS | 45.0% | |
| CAACCTTCAGAAGAGTCCTA+CGG | + | tig0032336:23629-23648 | Msa1448820:CDS | 45.0% | |
| CGGTCCATATGTCCTATTAC+CGG | + | tig0032336:23649-23668 | Msa1448820:CDS | 45.0% | |
| CCTTCCGGTAATAGGACATA+TGG | - | tig0032336:23656-23675 | None:intergenic | 45.0% | |
| CCATATGTCCTATTACCGGA+AGG | + | tig0032336:23653-23672 | Msa1448820:CDS | 45.0% | |
| TTGTCATCCCTTCCGGTAAT+AGG | - | tig0032336:23664-23683 | None:intergenic | 45.0% | |
| AAGGATTAGGAGGCAGGTTT+GGG | + | tig0032336:23804-23823 | Msa1448820:CDS | 45.0% | |
| ! | TCTAACGCAAGTGGTTGGTG+CGG | - | tig0032336:22419-22438 | None:intergenic | 50.0% |
| AGAGGTCTAACGCAAGTGGT+TGG | - | tig0032336:22424-22443 | None:intergenic | 50.0% | |
| AACCACTTGCGTTAGACCTC+TGG | + | tig0032336:22423-22442 | Msa1448820:intron | 50.0% | |
| !! | GTGCGATGCATCGGTACTTT+TGG | + | tig0032336:22522-22541 | Msa1448820:CDS | 50.0% |
| TGAAGAGAGGAGGACCAAGA+TGG | + | tig0032336:22992-23011 | Msa1448820:intron | 50.0% | |
| GAAGAGAGGAGGACCAAGAT+GGG | + | tig0032336:22993-23012 | Msa1448820:intron | 50.0% | |
| TGGAGCAGGGATGAATAGGT+TGG | - | tig0032336:23067-23086 | None:intergenic | 50.0% | |
| GATGTTTAAGCTTCCGGCAG+AGG | + | tig0032336:23551-23570 | Msa1448820:CDS | 50.0% | |
| TGATGGAAGGATTAGGAGGC+AGG | + | tig0032336:23798-23817 | Msa1448820:CDS | 50.0% | |
| GAAGGATTAGGAGGCAGGTT+TGG | + | tig0032336:23803-23822 | Msa1448820:CDS | 50.0% | |
| AGGATTAGGAGGCAGGTTTG+GGG | + | tig0032336:23805-23824 | Msa1448820:CDS | 50.0% | |
| ! | TCTAACGCAAGTGGTTGGTG+CGG | - | tig0032336:22419-22438 | None:intergenic | 50.0% |
| AGAGGTCTAACGCAAGTGGT+TGG | - | tig0032336:22424-22443 | None:intergenic | 50.0% | |
| AACCACTTGCGTTAGACCTC+TGG | + | tig0032336:22423-22442 | Msa1448820:intron | 50.0% | |
| !! | GTGCGATGCATCGGTACTTT+TGG | + | tig0032336:22522-22541 | Msa1448820:CDS | 50.0% |
| TGAAGAGAGGAGGACCAAGA+TGG | + | tig0032336:22992-23011 | Msa1448820:intron | 50.0% | |
| GAAGAGAGGAGGACCAAGAT+GGG | + | tig0032336:22993-23012 | Msa1448820:intron | 50.0% | |
| TGGAGCAGGGATGAATAGGT+TGG | - | tig0032336:23067-23086 | None:intergenic | 50.0% | |
| GATGTTTAAGCTTCCGGCAG+AGG | + | tig0032336:23551-23570 | Msa1448820:CDS | 50.0% | |
| TGATGGAAGGATTAGGAGGC+AGG | + | tig0032336:23798-23817 | Msa1448820:CDS | 50.0% | |
| GAAGGATTAGGAGGCAGGTT+TGG | + | tig0032336:23803-23822 | Msa1448820:CDS | 50.0% | |
| AGGATTAGGAGGCAGGTTTG+GGG | + | tig0032336:23805-23824 | Msa1448820:CDS | 50.0% | |
| CACCAGAGGTCTAACGCAAG+TGG | - | tig0032336:22428-22447 | None:intergenic | 55.0% | |
| GAGGACCAAGATGGGATGTG+TGG | + | tig0032336:23001-23020 | Msa1448820:CDS | 55.0% | |
| ACCAAGATGGGATGTGTGGC+TGG | + | tig0032336:23005-23024 | Msa1448820:CDS | 55.0% | |
| CCAAGATGGGATGTGTGGCT+GGG | + | tig0032336:23006-23025 | Msa1448820:CDS | 55.0% | |
| CAAGATGGGATGTGTGGCTG+GGG | + | tig0032336:23007-23026 | Msa1448820:CDS | 55.0% | |
| GGACCGTAGGACTCTTCTGA+AGG | - | tig0032336:23635-23654 | None:intergenic | 55.0% | |
| CACCAGAGGTCTAACGCAAG+TGG | - | tig0032336:22428-22447 | None:intergenic | 55.0% | |
| GAGGACCAAGATGGGATGTG+TGG | + | tig0032336:23001-23020 | Msa1448820:CDS | 55.0% | |
| ACCAAGATGGGATGTGTGGC+TGG | + | tig0032336:23005-23024 | Msa1448820:CDS | 55.0% | |
| CCAAGATGGGATGTGTGGCT+GGG | + | tig0032336:23006-23025 | Msa1448820:CDS | 55.0% | |
| CAAGATGGGATGTGTGGCTG+GGG | + | tig0032336:23007-23026 | Msa1448820:CDS | 55.0% | |
| GGACCGTAGGACTCTTCTGA+AGG | - | tig0032336:23635-23654 | None:intergenic | 55.0% | |
| CCCAGCCACACATCCCATCT+TGG | - | tig0032336:23009-23028 | None:intergenic | 60.0% | |
| CCCAGCCACACATCCCATCT+TGG | - | tig0032336:23009-23028 | None:intergenic | 60.0% | |
| GATGGGATGTGTGGCTGGGG+AGG | + | tig0032336:23010-23029 | Msa1448820:CDS | 65.0% | |
| GGATGTGTGGCTGGGGAGGA+AGG | + | tig0032336:23014-23033 | Msa1448820:CDS | 65.0% | |
| GATGGGATGTGTGGCTGGGG+AGG | + | tig0032336:23010-23029 | Msa1448820:CDS | 65.0% | |
| GGATGTGTGGCTGGGGAGGA+AGG | + | tig0032336:23014-23033 | Msa1448820:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0032336 | gene | 22113 | 23954 | 22113 | ID=Msa1448820;Name=Msa1448820 |
| tig0032336 | mRNA | 22113 | 23954 | 22113 | ID=Msa1448820-mRNA-1;Parent=Msa1448820;Name=Msa1448820-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|4|0|332 |
| tig0032336 | exon | 22113 | 22325 | 22113 | ID=Msa1448820-mRNA-1:exon:16625;Parent=Msa1448820-mRNA-1 |
| tig0032336 | exon | 22520 | 22711 | 22520 | ID=Msa1448820-mRNA-1:exon:16626;Parent=Msa1448820-mRNA-1 |
| tig0032336 | exon | 22997 | 23162 | 22997 | ID=Msa1448820-mRNA-1:exon:16627;Parent=Msa1448820-mRNA-1 |
| tig0032336 | exon | 23527 | 23954 | 23527 | ID=Msa1448820-mRNA-1:exon:16628;Parent=Msa1448820-mRNA-1 |
| tig0032336 | CDS | 22113 | 22325 | 22113 | ID=Msa1448820-mRNA-1:cds;Parent=Msa1448820-mRNA-1 |
| tig0032336 | CDS | 22520 | 22711 | 22520 | ID=Msa1448820-mRNA-1:cds;Parent=Msa1448820-mRNA-1 |
| tig0032336 | CDS | 22997 | 23162 | 22997 | ID=Msa1448820-mRNA-1:cds;Parent=Msa1448820-mRNA-1 |
| tig0032336 | CDS | 23527 | 23954 | 23527 | ID=Msa1448820-mRNA-1:cds;Parent=Msa1448820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
