Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566490 | XP_003630011.2 | 96.907 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 2.03e-132 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566490 | sp|C6TG62|CSPL9_SOYBN | 68.394 | 193 | 61 | 0 | 1 | 193 | 1 | 193 | 1.29e-100 | 291 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566490 | A0A396GP31 | 96.907 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 9.68e-133 | 379 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004900 | Msa0566490 | 0.831679 | 1.455763e-55 | -8.615850e-47 |
| Msa0004990 | Msa0566490 | 0.800771 | 1.232764e-48 | -8.615850e-47 |
| Msa0011010 | Msa0566490 | 0.833660 | 4.693297e-56 | -8.615850e-47 |
| Msa0011040 | Msa0566490 | 0.829677 | 4.502049e-55 | -8.615850e-47 |
| Msa0024650 | Msa0566490 | 0.850071 | 2.152318e-60 | -8.615850e-47 |
| Msa0025560 | Msa0566490 | 0.821786 | 3.355644e-53 | -8.615850e-47 |
| Msa0025570 | Msa0566490 | 0.806279 | 8.886004e-50 | -8.615850e-47 |
| Msa0028690 | Msa0566490 | 0.840344 | 9.198842e-58 | -8.615850e-47 |
| Msa0031650 | Msa0566490 | 0.807413 | 5.117160e-50 | -8.615850e-47 |
| Msa0038010 | Msa0566490 | 0.820239 | 7.617549e-53 | -8.615850e-47 |
| Msa0048380 | Msa0566490 | 0.841321 | 5.102278e-58 | -8.615850e-47 |
| Msa0053040 | Msa0566490 | 0.800227 | 1.591377e-48 | -8.615850e-47 |
| Msa0060410 | Msa0566490 | 0.820286 | 7.433354e-53 | -8.615850e-47 |
| Msa0072180 | Msa0566490 | 0.814524 | 1.474313e-51 | -8.615850e-47 |
| Msa0073110 | Msa0566490 | 0.821359 | 4.209739e-53 | -8.615850e-47 |
| Msa0084190 | Msa0566490 | 0.810337 | 1.212015e-50 | -8.615850e-47 |
| Msa0085710 | Msa0566490 | 0.828893 | 6.979629e-55 | -8.615850e-47 |
| Msa0089190 | Msa0566490 | 0.819828 | 9.459221e-53 | -8.615850e-47 |
| Msa0098380 | Msa0566490 | 0.815501 | 8.948666e-52 | -8.615850e-47 |
| Msa0106540 | Msa0566490 | 0.801345 | 9.409300e-49 | -8.615850e-47 |
| Msa0119240 | Msa0566490 | 0.804274 | 2.336554e-49 | -8.615850e-47 |
| Msa0120450 | Msa0566490 | 0.836274 | 1.030312e-56 | -8.615850e-47 |
| Msa0121300 | Msa0566490 | 0.808076 | 3.699696e-50 | -8.615850e-47 |
| Msa0121320 | Msa0566490 | 0.809764 | 1.610554e-50 | -8.615850e-47 |
| Msa0130360 | Msa0566490 | 0.819112 | 1.377642e-52 | -8.615850e-47 |
| Msa0132250 | Msa0566490 | 0.812655 | 3.801503e-51 | -8.615850e-47 |
| Msa0136000 | Msa0566490 | 0.823503 | 1.337295e-53 | -8.615850e-47 |
| Msa0154750 | Msa0566490 | 0.805788 | 1.127329e-49 | -8.615850e-47 |
| Msa0163690 | Msa0566490 | 0.846221 | 2.489008e-59 | -8.615850e-47 |
| Msa0166180 | Msa0566490 | 0.802231 | 6.189700e-49 | -8.615850e-47 |
| Msa0166190 | Msa0566490 | 0.829138 | 6.085790e-55 | -8.615850e-47 |
| Msa0168750 | Msa0566490 | 0.841218 | 5.430176e-58 | -8.615850e-47 |
| Msa0171740 | Msa0566490 | 0.816279 | 6.002888e-52 | -8.615850e-47 |
| Msa0175060 | Msa0566490 | 0.813526 | 2.448641e-51 | -8.615850e-47 |
| Msa0189990 | Msa0566490 | 0.868999 | 4.301010e-66 | -8.615850e-47 |
| Msa0195190 | Msa0566490 | 0.800880 | 1.170855e-48 | -8.615850e-47 |
| Msa0199440 | Msa0566490 | 0.801358 | 9.348678e-49 | -8.615850e-47 |
| Msa0205050 | Msa0566490 | 0.830769 | 2.437412e-55 | -8.615850e-47 |
| Msa0219810 | Msa0566490 | 0.801581 | 8.415535e-49 | -8.615850e-47 |
| Msa0224870 | Msa0566490 | 0.828311 | 9.646871e-55 | -8.615850e-47 |
| Msa0230920 | Msa0566490 | 0.810452 | 1.144432e-50 | -8.615850e-47 |
| Msa0234150 | Msa0566490 | 0.810239 | 1.272224e-50 | -8.615850e-47 |
| Msa0370620 | Msa0566490 | 0.806524 | 7.889746e-50 | -8.615850e-47 |
| Msa0374040 | Msa0566490 | 0.808305 | 3.306559e-50 | -8.615850e-47 |
| Msa0374470 | Msa0566490 | 0.808182 | 3.511119e-50 | -8.615850e-47 |
| Msa0374600 | Msa0566490 | 0.809197 | 2.131100e-50 | -8.615850e-47 |
| Msa0380110 | Msa0566490 | 0.812585 | 3.937358e-51 | -8.615850e-47 |
| Msa0396700 | Msa0566490 | 0.807257 | 5.521954e-50 | -8.615850e-47 |
| Msa0401500 | Msa0566490 | 0.808488 | 3.021511e-50 | -8.615850e-47 |
| Msa0412560 | Msa0566490 | 0.802707 | 4.938410e-49 | -8.615850e-47 |
| Msa0414480 | Msa0566490 | 0.809491 | 1.843087e-50 | -8.615850e-47 |
| Msa0415010 | Msa0566490 | 0.805413 | 1.350817e-49 | -8.615850e-47 |
| Msa0418230 | Msa0566490 | 0.865078 | 7.662618e-65 | -8.615850e-47 |
| Msa0423630 | Msa0566490 | 0.819021 | 1.445203e-52 | -8.615850e-47 |
| Msa0425950 | Msa0566490 | 0.831248 | 1.858835e-55 | -8.615850e-47 |
| Msa0426030 | Msa0566490 | 0.822782 | 1.970316e-53 | -8.615850e-47 |
| Msa0426170 | Msa0566490 | 0.825327 | 4.978597e-54 | -8.615850e-47 |
| Msa0429450 | Msa0566490 | 0.804395 | 2.205297e-49 | -8.615850e-47 |
| Msa0433090 | Msa0566490 | 0.803864 | 2.844448e-49 | -8.615850e-47 |
| Msa0448230 | Msa0566490 | 0.822600 | 2.172271e-53 | -8.615850e-47 |
| Msa0449500 | Msa0566490 | 0.815876 | 7.382600e-52 | -8.615850e-47 |
| Msa0454160 | Msa0566490 | 0.813143 | 2.971017e-51 | -8.615850e-47 |
| Msa0454770 | Msa0566490 | 0.809440 | 1.890720e-50 | -8.615850e-47 |
| Msa0459930 | Msa0566490 | 0.803600 | 3.225879e-49 | -8.615850e-47 |
| Msa0464620 | Msa0566490 | 0.877778 | 4.781624e-69 | -8.615850e-47 |
| Msa0481670 | Msa0566490 | 0.809600 | 1.746310e-50 | -8.615850e-47 |
| Msa0240580 | Msa0566490 | 0.815800 | 7.678138e-52 | -8.615850e-47 |
| Msa0247780 | Msa0566490 | 0.869916 | 2.162402e-66 | -8.615850e-47 |
| Msa0248320 | Msa0566490 | 0.818085 | 2.355808e-52 | -8.615850e-47 |
| Msa0258260 | Msa0566490 | 0.821190 | 4.605473e-53 | -8.615850e-47 |
| Msa0278920 | Msa0566490 | 0.804270 | 2.341164e-49 | -8.615850e-47 |
| Msa0278960 | Msa0566490 | 0.820843 | 5.535002e-53 | -8.615850e-47 |
| Msa0280160 | Msa0566490 | 0.805633 | 1.214756e-49 | -8.615850e-47 |
| Msa0286360 | Msa0566490 | 0.812039 | 5.179684e-51 | -8.615850e-47 |
| Msa0287480 | Msa0566490 | 0.813731 | 2.206732e-51 | -8.615850e-47 |
| Msa0287630 | Msa0566490 | 0.805783 | 1.130166e-49 | -8.615850e-47 |
| Msa0297340 | Msa0566490 | 0.805519 | 1.283435e-49 | -8.615850e-47 |
| Msa0303900 | Msa0566490 | 0.825221 | 5.275349e-54 | -8.615850e-47 |
| Msa0307740 | Msa0566490 | 0.830699 | 2.535734e-55 | -8.615850e-47 |
| Msa0323090 | Msa0566490 | 0.804854 | 1.769177e-49 | -8.615850e-47 |
| Msa0325260 | Msa0566490 | 0.865927 | 4.138833e-65 | -8.615850e-47 |
| Msa0331190 | Msa0566490 | 0.805405 | 1.356518e-49 | -8.615850e-47 |
| Msa0333770 | Msa0566490 | 0.834089 | 3.665602e-56 | -8.615850e-47 |
| Msa0356240 | Msa0566490 | 0.810747 | 9.886032e-51 | -8.615850e-47 |
| Msa0356270 | Msa0566490 | 0.816622 | 5.029284e-52 | -8.615850e-47 |
| Msa0357470 | Msa0566490 | 0.803517 | 3.356927e-49 | -8.615850e-47 |
| Msa0357510 | Msa0566490 | 0.811384 | 7.191407e-51 | -8.615850e-47 |
| Msa0357530 | Msa0566490 | 0.805139 | 1.542073e-49 | -8.615850e-47 |
| Msa0361700 | Msa0566490 | 0.800345 | 1.505669e-48 | -8.615850e-47 |
| Msa0487110 | Msa0566490 | 0.820496 | 6.651443e-53 | -8.615850e-47 |
| Msa0490100 | Msa0566490 | 0.811395 | 7.152732e-51 | -8.615850e-47 |
| Msa0491780 | Msa0566490 | 0.807542 | 4.804572e-50 | -8.615850e-47 |
| Msa0491800 | Msa0566490 | 0.807571 | 4.737497e-50 | -8.615850e-47 |
| Msa0497680 | Msa0566490 | 0.812517 | 4.074288e-51 | -8.615850e-47 |
| Msa0501080 | Msa0566490 | 0.815368 | 9.583849e-52 | -8.615850e-47 |
| Msa0502940 | Msa0566490 | 0.804480 | 2.116754e-49 | -8.615850e-47 |
| Msa0510050 | Msa0566490 | 0.854844 | 9.391795e-62 | -8.615850e-47 |
| Msa0531030 | Msa0566490 | 0.805496 | 1.298103e-49 | -8.615850e-47 |
| Msa0531040 | Msa0566490 | 0.812348 | 4.436136e-51 | -8.615850e-47 |
| Msa0531050 | Msa0566490 | 0.805804 | 1.118359e-49 | -8.615850e-47 |
| Msa0531080 | Msa0566490 | 0.814905 | 1.214092e-51 | -8.615850e-47 |
| Msa0538650 | Msa0566490 | 0.809955 | 1.465120e-50 | -8.615850e-47 |
| Msa0540640 | Msa0566490 | 0.836422 | 9.444773e-57 | -8.615850e-47 |
| Msa0547370 | Msa0566490 | 0.843586 | 1.279510e-58 | -8.615850e-47 |
| Msa0548790 | Msa0566490 | 0.815454 | 9.170935e-52 | -8.615850e-47 |
| Msa0549170 | Msa0566490 | 0.807690 | 4.468229e-50 | -8.615850e-47 |
| Msa0557240 | Msa0566490 | 0.834584 | 2.754107e-56 | -8.615850e-47 |
| Msa0557250 | Msa0566490 | 0.822944 | 1.806351e-53 | -8.615850e-47 |
| Msa0561830 | Msa0566490 | 0.811281 | 7.572498e-51 | -8.615850e-47 |
| Msa0566490 | Msa0567330 | 0.800919 | 1.150023e-48 | -8.615850e-47 |
| Msa0566490 | Msa0567570 | 0.809383 | 1.944162e-50 | -8.615850e-47 |
| Msa0566490 | Msa0568920 | 0.805180 | 1.511672e-49 | -8.615850e-47 |
| Msa0566490 | Msa0576320 | 0.800597 | 1.337715e-48 | -8.615850e-47 |
| Msa0566490 | Msa0587930 | 0.835121 | 2.017145e-56 | -8.615850e-47 |
| Msa0566490 | Msa0588040 | 0.825343 | 4.937749e-54 | -8.615850e-47 |
| Msa0566490 | Msa0597820 | 0.803575 | 3.265685e-49 | -8.615850e-47 |
| Msa0566490 | Msa0602100 | 0.849008 | 4.260356e-60 | -8.615850e-47 |
| Msa0566490 | Msa0604280 | 0.802951 | 4.397265e-49 | -8.615850e-47 |
| Msa0566490 | Msa0606600 | 0.804614 | 1.985144e-49 | -8.615850e-47 |
| Msa0566490 | Msa0614960 | 0.814259 | 1.687653e-51 | -8.615850e-47 |
| Msa0566490 | Msa0622890 | 0.801894 | 7.259670e-49 | -8.615850e-47 |
| Msa0566490 | Msa0628200 | 0.808326 | 3.272683e-50 | -8.615850e-47 |
| Msa0566490 | Msa0643230 | 0.839233 | 1.791536e-57 | -8.615850e-47 |
| Msa0566490 | Msa0647300 | 0.817554 | 3.104791e-52 | -8.615850e-47 |
| Msa0566490 | Msa0652590 | 0.827456 | 1.549152e-54 | -8.615850e-47 |
| Msa0566490 | Msa0655370 | 0.813668 | 2.278472e-51 | -8.615850e-47 |
| Msa0566490 | Msa0658150 | 0.927053 | 2.007191e-91 | -8.615850e-47 |
| Msa0566490 | Msa0682910 | 0.808526 | 2.966542e-50 | -8.615850e-47 |
| Msa0566490 | Msa0685080 | 0.813486 | 2.498471e-51 | -8.615850e-47 |
| Msa0566490 | Msa0686830 | 0.819696 | 1.014307e-52 | -8.615850e-47 |
| Msa0566490 | Msa0689840 | 0.820942 | 5.252831e-53 | -8.615850e-47 |
| Msa0566490 | Msa0699170 | 0.821508 | 3.889070e-53 | -8.615850e-47 |
| Msa0566490 | Msa0703000 | 0.929871 | 3.728061e-93 | -8.615850e-47 |
| Msa0566490 | Msa0707330 | 0.801153 | 1.029848e-48 | -8.615850e-47 |
| Msa0566490 | Msa0708680 | 0.819944 | 8.900319e-53 | -8.615850e-47 |
| Msa0566490 | Msa0716000 | 0.821894 | 3.166740e-53 | -8.615850e-47 |
| Msa0566490 | Msa0716980 | 0.809574 | 1.769514e-50 | -8.615850e-47 |
| Msa0566490 | Msa0717030 | 0.800124 | 1.669930e-48 | -8.615850e-47 |
| Msa0566490 | Msa0730890 | 0.853791 | 1.891498e-61 | -8.615850e-47 |
| Msa0566490 | Msa0734080 | 0.813693 | 2.249534e-51 | -8.615850e-47 |
| Msa0566490 | Msa0734100 | 0.820042 | 8.451786e-53 | -8.615850e-47 |
| Msa0566490 | Msa0750790 | 0.820919 | 5.316672e-53 | -8.615850e-47 |
| Msa0566490 | Msa0750830 | 0.821734 | 3.449262e-53 | -8.615850e-47 |
| Msa0566490 | Msa0758150 | 0.812032 | 5.198942e-51 | -8.615850e-47 |
| Msa0566490 | Msa0773030 | 0.892453 | 1.565491e-74 | -8.615850e-47 |
| Msa0566490 | Msa0775350 | 0.825313 | 5.016830e-54 | -8.615850e-47 |
| Msa0566490 | Msa0776340 | 0.832080 | 1.159353e-55 | -8.615850e-47 |
| Msa0566490 | Msa0792410 | 0.800026 | 1.747882e-48 | -8.615850e-47 |
| Msa0566490 | Msa0794090 | 0.843379 | 1.452922e-58 | -8.615850e-47 |
| Msa0566490 | Msa0794100 | 0.841334 | 5.061034e-58 | -8.615850e-47 |
| Msa0566490 | Msa0794200 | 0.804889 | 1.739266e-49 | -8.615850e-47 |
| Msa0566490 | Msa0798840 | 0.823196 | 1.577644e-53 | -8.615850e-47 |
| Msa0566490 | Msa0799120 | 0.800439 | 1.440438e-48 | -8.615850e-47 |
| Msa0566490 | Msa0810330 | 0.839948 | 1.167442e-57 | -8.615850e-47 |
| Msa0566490 | Msa0812720 | 0.844698 | 6.435435e-59 | -8.615850e-47 |
| Msa0566490 | Msa0813840 | 0.835529 | 1.591816e-56 | -8.615850e-47 |
| Msa0566490 | Msa0831310 | 0.822366 | 2.462094e-53 | -8.615850e-47 |
| Msa0566490 | Msa0831320 | 0.826806 | 2.216083e-54 | -8.615850e-47 |
| Msa0566490 | Msa0838210 | 0.822274 | 2.586551e-53 | -8.615850e-47 |
| Msa0566490 | Msa0841930 | 0.800869 | 1.177347e-48 | -8.615850e-47 |
| Msa0566490 | Msa0847140 | 0.814253 | 1.692440e-51 | -8.615850e-47 |
| Msa0566490 | Msa0850640 | 0.840578 | 7.991035e-58 | -8.615850e-47 |
| Msa0566490 | Msa0853080 | 0.844709 | 6.390931e-59 | -8.615850e-47 |
| Msa0566490 | Msa0854380 | 0.841730 | 3.980828e-58 | -8.615850e-47 |
| Msa0566490 | Msa0890210 | 0.847646 | 1.013918e-59 | -8.615850e-47 |
| Msa0566490 | Msa0893220 | 0.822686 | 2.074181e-53 | -8.615850e-47 |
| Msa0566490 | Msa0896920 | 0.841090 | 5.866982e-58 | -8.615850e-47 |
| Msa0566490 | Msa0896950 | 0.811404 | 7.120985e-51 | -8.615850e-47 |
| Msa0566490 | Msa0907880 | 0.811777 | 5.907796e-51 | -8.615850e-47 |
| Msa0566490 | Msa0909260 | 0.800347 | 1.504177e-48 | -8.615850e-47 |
| Msa0566490 | Msa0910590 | 0.800522 | 1.385275e-48 | -8.615850e-47 |
| Msa0566490 | Msa0945330 | 0.804766 | 1.844976e-49 | -8.615850e-47 |
| Msa0566490 | Msa0948430 | 0.805692 | 1.180908e-49 | -8.615850e-47 |
| Msa0566490 | Msa0950090 | 0.829937 | 3.891746e-55 | -8.615850e-47 |
| Msa0566490 | Msa0962290 | 0.811120 | 8.205347e-51 | -8.615850e-47 |
| Msa0566490 | Msa0964510 | 0.812785 | 3.559159e-51 | -8.615850e-47 |
| Msa0566490 | Msa0975950 | 0.815164 | 1.063540e-51 | -8.615850e-47 |
| Msa0566490 | Msa0996980 | 0.824627 | 7.284498e-54 | -8.615850e-47 |
| Msa0566490 | Msa0996990 | 0.803906 | 2.787272e-49 | -8.615850e-47 |
| Msa0566490 | Msa1006030 | 0.821131 | 4.752424e-53 | -8.615850e-47 |
| Msa0566490 | Msa1024420 | 0.810837 | 9.449214e-51 | -8.615850e-47 |
| Msa0566490 | Msa1024480 | 0.809429 | 1.900397e-50 | -8.615850e-47 |
| Msa0566490 | Msa1029860 | 0.833856 | 4.193750e-56 | -8.615850e-47 |
| Msa0566490 | Msa1031060 | 0.820936 | 5.271486e-53 | -8.615850e-47 |
| Msa0566490 | Msa1035050 | 0.824970 | 6.047733e-54 | -8.615850e-47 |
| Msa0566490 | Msa1035880 | 0.841049 | 6.014079e-58 | -8.615850e-47 |
| Msa0566490 | Msa1040330 | 0.805383 | 1.370911e-49 | -8.615850e-47 |
| Msa0566490 | Msa1047300 | 0.808413 | 3.135141e-50 | -8.615850e-47 |
| Msa0566490 | Msa1047340 | 0.809917 | 1.492879e-50 | -8.615850e-47 |
| Msa0566490 | Msa1048390 | 0.831291 | 1.813749e-55 | -8.615850e-47 |
| Msa0566490 | Msa1049400 | 0.829347 | 5.416540e-55 | -8.615850e-47 |
| Msa0566490 | Msa1062060 | 0.806603 | 7.592560e-50 | -8.615850e-47 |
| Msa0566490 | Msa1063210 | 0.815163 | 1.064289e-51 | -8.615850e-47 |
| Msa0566490 | Msa1063260 | 0.807270 | 5.486431e-50 | -8.615850e-47 |
| Msa0566490 | Msa1075030 | 0.815756 | 7.853551e-52 | -8.615850e-47 |
| Msa0566490 | Msa1075090 | 0.821175 | 4.642718e-53 | -8.615850e-47 |
| Msa0566490 | Msa1082080 | 0.812009 | 5.258975e-51 | -8.615850e-47 |
| Msa0566490 | Msa1087200 | 0.838063 | 3.592121e-57 | -8.615850e-47 |
| Msa0566490 | Msa1087210 | 0.835450 | 1.666378e-56 | -8.615850e-47 |
| Msa0566490 | Msa1099650 | 0.804576 | 2.021622e-49 | -8.615850e-47 |
| Msa0566490 | Msa1100330 | 0.827448 | 1.555505e-54 | -8.615850e-47 |
| Msa0566490 | Msa1107220 | 0.808478 | 3.036265e-50 | -8.615850e-47 |
| Msa0566490 | Msa1107520 | 0.816771 | 4.656491e-52 | -8.615850e-47 |
| Msa0566490 | Msa1108560 | 0.818994 | 1.466054e-52 | -8.615850e-47 |
| Msa0566490 | Msa1108610 | 0.803909 | 2.783911e-49 | -8.615850e-47 |
| Msa0566490 | Msa1111910 | 0.801327 | 9.486111e-49 | -8.615850e-47 |
| Msa0566490 | Msa1115900 | 0.824850 | 6.454154e-54 | -8.615850e-47 |
| Msa0566490 | Msa1119670 | 0.814618 | 1.405400e-51 | -8.615850e-47 |
| Msa0566490 | Msa1124220 | 0.817265 | 3.607571e-52 | -8.615850e-47 |
| Msa0566490 | Msa1136630 | 0.820521 | 6.566224e-53 | -8.615850e-47 |
| Msa0566490 | Msa1140930 | 0.802229 | 6.195812e-49 | -8.615850e-47 |
| Msa0566490 | Msa1143250 | 0.817234 | 3.666014e-52 | -8.615850e-47 |
| Msa0566490 | Msa1150760 | 0.821593 | 3.718754e-53 | -8.615850e-47 |
| Msa0566490 | Msa1152330 | 0.804308 | 2.299191e-49 | -8.615850e-47 |
| Msa0566490 | Msa1155610 | 0.805185 | 1.508115e-49 | -8.615850e-47 |
| Msa0566490 | Msa1160540 | 0.846052 | 2.767767e-59 | -8.615850e-47 |
| Msa0566490 | Msa1162370 | 0.827700 | 1.353494e-54 | -8.615850e-47 |
| Msa0566490 | Msa1162430 | 0.823185 | 1.586648e-53 | -8.615850e-47 |
| Msa0566490 | Msa1163300 | 0.842077 | 3.223457e-58 | -8.615850e-47 |
| Msa0566490 | Msa1181090 | 0.801288 | 9.662297e-49 | -8.615850e-47 |
| Msa0566490 | Msa1183870 | 0.827807 | 1.276010e-54 | -8.615850e-47 |
| Msa0566490 | Msa1187750 | 0.829126 | 6.128974e-55 | -8.615850e-47 |
| Msa0566490 | Msa1191350 | 0.814459 | 1.524166e-51 | -8.615850e-47 |
| Msa0566490 | Msa1203650 | 0.800151 | 1.648931e-48 | -8.615850e-47 |
| Msa0566490 | Msa1211940 | 0.870425 | 1.473881e-66 | -8.615850e-47 |
| Msa0566490 | Msa1212080 | 0.861515 | 9.721822e-64 | -8.615850e-47 |
| Msa0566490 | Msa1223710 | 0.803598 | 3.230308e-49 | -8.615850e-47 |
| Msa0566490 | Msa1223960 | 0.823444 | 1.380667e-53 | -8.615850e-47 |
| Msa0566490 | Msa1223990 | 0.818112 | 2.323420e-52 | -8.615850e-47 |
| Msa0566490 | Msa1238250 | 0.814847 | 1.250882e-51 | -8.615850e-47 |
| Msa0566490 | Msa1241960 | 0.813985 | 1.940137e-51 | -8.615850e-47 |
| Msa0566490 | Msa1242160 | 0.808302 | 3.310573e-50 | -8.615850e-47 |
| Msa0566490 | Msa1254670 | 0.804734 | 1.874188e-49 | -8.615850e-47 |
| Msa0566490 | Msa1256730 | 0.800936 | 1.140338e-48 | -8.615850e-47 |
| Msa0566490 | Msa1263110 | 0.838878 | 2.213625e-57 | -8.615850e-47 |
| Msa0566490 | Msa1268360 | 0.803152 | 3.995900e-49 | -8.615850e-47 |
| Msa0566490 | Msa1269200 | 0.826439 | 2.710763e-54 | -8.615850e-47 |
| Msa0566490 | Msa1269500 | 0.824892 | 6.309934e-54 | -8.615850e-47 |
| Msa0566490 | Msa1273320 | 0.802895 | 4.516025e-49 | -8.615850e-47 |
| Msa0566490 | Msa1283930 | 0.800345 | 1.505649e-48 | -8.615850e-47 |
| Msa0566490 | Msa1284020 | 0.829553 | 4.825829e-55 | -8.615850e-47 |
| Msa0566490 | Msa1319030 | 0.829344 | 5.425253e-55 | -8.615850e-47 |
| Msa0566490 | Msa1319190 | 0.820690 | 6.001974e-53 | -8.615850e-47 |
| Msa0566490 | Msa1322500 | 0.809907 | 1.500607e-50 | -8.615850e-47 |
| Msa0566490 | Msa1322960 | 0.807566 | 4.748910e-50 | -8.615850e-47 |
| Msa0566490 | Msa1334700 | 0.801428 | 9.045842e-49 | -8.615850e-47 |
| Msa0566490 | Msa1338510 | 0.804573 | 2.025034e-49 | -8.615850e-47 |
| Msa0566490 | Msa1344450 | 0.852587 | 4.186350e-61 | -8.615850e-47 |
| Msa0566490 | Msa1349420 | 0.812735 | 3.651101e-51 | -8.615850e-47 |
| Msa0566490 | Msa1357840 | 0.817015 | 4.104672e-52 | -8.615850e-47 |
| Msa0566490 | Msa1364690 | 0.800615 | 1.326375e-48 | -8.615850e-47 |
| Msa0566490 | Msa1376880 | 0.856317 | 3.490404e-62 | -8.615850e-47 |
| Msa0566490 | Msa1377190 | 0.800592 | 1.340840e-48 | -8.615850e-47 |
| Msa0566490 | Msa1378950 | 0.808851 | 2.527683e-50 | -8.615850e-47 |
| Msa0566490 | Msa1384130 | 0.869728 | 2.490422e-66 | -8.615850e-47 |
| Msa0566490 | Msa1386830 | 0.808907 | 2.458362e-50 | -8.615850e-47 |
| Msa0566490 | Msa1395080 | 0.929341 | 7.985370e-93 | -8.615850e-47 |
| Msa0566490 | Msa1405830 | 0.802055 | 6.727915e-49 | -8.615850e-47 |
| Msa0566490 | Msa1407810 | 0.802904 | 4.496099e-49 | -8.615850e-47 |
| Msa0566490 | Msa1413450 | 0.804213 | 2.406582e-49 | -8.615850e-47 |
| Msa0566490 | Msa1417220 | 0.837155 | 6.140878e-57 | -8.615850e-47 |
| Msa0566490 | Msa1430950 | 0.829752 | 4.317435e-55 | -8.615850e-47 |
| Msa0566490 | Msa1433040 | 0.815405 | 9.403183e-52 | -8.615850e-47 |
| Msa0566490 | Msa1437780 | 0.804246 | 2.368660e-49 | -8.615850e-47 |
| Msa0566490 | Msa1445530 | 0.815482 | 9.037408e-52 | -8.615850e-47 |
| Msa0566490 | Msa1448820 | 0.809540 | 1.799015e-50 | -8.615850e-47 |
| Msa0566490 | Msa1458270 | 0.831959 | 1.241493e-55 | -8.615850e-47 |
| Msa0566490 | Msa1462610 | 0.800431 | 1.445700e-48 | -8.615850e-47 |
| Msa0566490 | Msa1464140 | 0.822906 | 1.843494e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566490 | MtrunA17_Chr8g0381001 | 96.907 | 194 | 6 | 0 | 1 | 194 | 1 | 194 | 1.86e-136 | 379 |
| Msa0566490 | MtrunA17_Chr2g0303151 | 75.773 | 194 | 46 | 1 | 1 | 193 | 1 | 194 | 2.46e-98 | 283 |
| Msa0566490 | MtrunA17_Chr4g0066721 | 36.111 | 144 | 90 | 2 | 28 | 170 | 35 | 177 | 2.44e-25 | 97.4 |
| Msa0566490 | MtrunA17_Chr7g0268681 | 32.778 | 180 | 114 | 3 | 16 | 194 | 18 | 191 | 8.03e-24 | 93.2 |
| Msa0566490 | MtrunA17_Chr4g0021111 | 35.185 | 162 | 89 | 2 | 28 | 189 | 10 | 155 | 1.09e-23 | 92.0 |
| Msa0566490 | MtrunA17_Chr2g0286341 | 35.542 | 166 | 101 | 3 | 30 | 194 | 27 | 187 | 1.78e-23 | 92.0 |
| Msa0566490 | MtrunA17_Chr4g0042551 | 29.630 | 189 | 106 | 6 | 9 | 184 | 36 | 210 | 1.78e-16 | 74.3 |
| Msa0566490 | MtrunA17_Chr4g0066711 | 30.159 | 126 | 87 | 1 | 64 | 188 | 56 | 181 | 1.37e-15 | 71.2 |
| Msa0566490 | MtrunA17_Chr7g0217691 | 28.387 | 155 | 104 | 1 | 30 | 184 | 32 | 179 | 2.61e-15 | 70.5 |
| Msa0566490 | MtrunA17_Chr5g0417761 | 28.387 | 155 | 104 | 1 | 30 | 184 | 32 | 179 | 1.91e-12 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0566490 | AT5G44550.1 | 53.714 | 175 | 81 | 0 | 19 | 193 | 11 | 185 | 3.26e-61 | 189 |
| Msa0566490 | AT4G20390.1 | 55.491 | 173 | 76 | 1 | 23 | 194 | 14 | 186 | 1.39e-55 | 175 |
| Msa0566490 | AT1G03700.1 | 31.447 | 159 | 93 | 3 | 28 | 186 | 11 | 153 | 4.93e-20 | 82.8 |
| Msa0566490 | AT4G15630.1 | 31.481 | 162 | 109 | 2 | 28 | 188 | 29 | 189 | 6.38e-20 | 83.2 |
| Msa0566490 | AT4G15610.1 | 33.803 | 142 | 89 | 3 | 30 | 170 | 33 | 170 | 7.09e-20 | 83.2 |
| Msa0566490 | AT4G15620.1 | 29.341 | 167 | 116 | 2 | 23 | 188 | 24 | 189 | 9.66e-19 | 80.1 |
| Msa0566490 | AT1G14160.1 | 33.136 | 169 | 95 | 4 | 30 | 194 | 55 | 209 | 1.52e-18 | 80.1 |
| Msa0566490 | AT5G15290.1 | 30.114 | 176 | 108 | 4 | 1 | 171 | 1 | 166 | 1.08e-17 | 77.4 |
| Msa0566490 | AT3G06390.1 | 31.852 | 135 | 82 | 4 | 31 | 161 | 42 | 170 | 7.89e-15 | 70.1 |
| Msa0566490 | AT4G03540.1 | 29.771 | 131 | 76 | 3 | 43 | 173 | 26 | 140 | 6.12e-14 | 67.0 |
Find 49 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGCCCTTTGTTATGAAATT+TGG | 0.181357 | 4_1:+67588727 | None:intergenic |
| AATTGTCAGTCTTCATAATT+TGG | 0.186212 | 4_1:-67588777 | Msa0566490:CDS |
| GCCTTAATAGCCTCTTTCAT+TGG | 0.251071 | 4_1:-67588439 | Msa0566490:CDS |
| GCAGTAAGAGGAACTGTAAT+TGG | 0.269342 | 4_1:+67588968 | None:intergenic |
| CCCAATGAAAGAGGCTATTA+AGG | 0.277944 | 4_1:+67588438 | None:intergenic |
| AAAAGGATCCAATCCTTCTT+TGG | 0.280238 | 4_1:+67589094 | None:intergenic |
| TCCTTCTTTGGTTTGGTCTC+AGG | 0.290070 | 4_1:+67589106 | None:intergenic |
| AGCAACATTTATGTCAGAAT+TGG | 0.314088 | 4_1:-67588539 | Msa0566490:CDS |
| AGCCCTTTGTTATGAAATTT+GGG | 0.316248 | 4_1:+67588728 | None:intergenic |
| GGTAGCAACTACAAAGCTTT+TGG | 0.318946 | 4_1:+67589003 | None:intergenic |
| ATGATAGCAATGGATATATT+AGG | 0.342029 | 4_1:-67588752 | Msa0566490:CDS |
| CCTTAATAGCCTCTTTCATT+GGG | 0.349015 | 4_1:-67588438 | Msa0566490:CDS |
| ATGGTAATTCACATGCAAAA+TGG | 0.384012 | 4_1:-67588510 | Msa0566490:CDS |
| TTGGGTGAATTAGATGGCTT+TGG | 0.384488 | 4_1:-67588587 | Msa0566490:intron |
| GATCCAATCCTTCTTTGGTT+TGG | 0.385867 | 4_1:+67589099 | None:intergenic |
| GTTAATTGCGATTTAATTTG+AGG | 0.389744 | 4_1:+67588371 | None:intergenic |
| CAGTAAGAGGAACTGTAATT+GGG | 0.394934 | 4_1:+67588969 | None:intergenic |
| TAATTTGAGGAGTTTGTTGA+TGG | 0.400545 | 4_1:+67588384 | None:intergenic |
| GCAACATTTATGTCAGAATT+GGG | 0.419599 | 4_1:-67588538 | Msa0566490:CDS |
| GACCCAAATTTCATAACAAA+GGG | 0.441961 | 4_1:-67588730 | Msa0566490:CDS |
| TCCTGAGACCAAACCAAAGA+AGG | 0.459469 | 4_1:-67589107 | Msa0566490:CDS |
| TGCTGAAACTTGGCAGTAAG+AGG | 0.478796 | 4_1:+67588956 | None:intergenic |
| ACCACCACCTCTGTTGCAAT+AGG | 0.484004 | 4_1:+67588462 | None:intergenic |
| CAACCACCCTAAGGGACAAA+AGG | 0.486521 | 4_1:+67589077 | None:intergenic |
| TTATGGACTAACACAAAAGC+TGG | 0.487148 | 4_1:+67588929 | None:intergenic |
| AGCTGGAGTATGCTGAAACT+TGG | 0.488766 | 4_1:+67588946 | None:intergenic |
| AGACCAAACCAAAGAAGGAT+TGG | 0.490966 | 4_1:-67589102 | Msa0566490:CDS |
| AGCTTTGTAGTTGCTACCAT+TGG | 0.493742 | 4_1:-67588998 | Msa0566490:CDS |
| GGACCCAAATTTCATAACAA+AGG | 0.504328 | 4_1:-67588731 | Msa0566490:CDS |
| ATGTCAGAATTGGGAAGGAA+TGG | 0.507856 | 4_1:-67588529 | Msa0566490:CDS |
| TACACTATCACAATGGCCTC+AGG | 0.512074 | 4_1:-67589166 | Msa0566490:exon |
| GTGAGAATACAGGTACTTTG+TGG | 0.524468 | 4_1:-67588810 | Msa0566490:intron |
| TAATTTGGTTATGATAGCAA+TGG | 0.531106 | 4_1:-67588762 | Msa0566490:CDS |
| ATGAAGACTGACAATTCCAT+TGG | 0.535909 | 4_1:+67588784 | None:intergenic |
| TCCTATTGCAACAGAGGTGG+TGG | 0.560694 | 4_1:-67588463 | Msa0566490:CDS |
| AGGTACTTTGTGGTAGCCAA+TGG | 0.565693 | 4_1:-67588800 | Msa0566490:CDS |
| GAGAATGAGCCCAATGAAAG+AGG | 0.569503 | 4_1:+67588429 | None:intergenic |
| GCTCTAGCATCAAGTGGAGA+TGG | 0.573326 | 4_1:-67588565 | Msa0566490:CDS |
| TGTAATTGGGGTGCTACCAA+TGG | 0.595649 | 4_1:+67588982 | None:intergenic |
| TTTGAGTCCTATTGCAACAG+AGG | 0.599496 | 4_1:-67588469 | Msa0566490:CDS |
| CATTTATGTCAGAATTGGGA+AGG | 0.599985 | 4_1:-67588534 | Msa0566490:CDS |
| ATACTGCAATCAGTGCAAGT+TGG | 0.603365 | 4_1:+67588705 | None:intergenic |
| GAGTCCTATTGCAACAGAGG+TGG | 0.611119 | 4_1:-67588466 | Msa0566490:CDS |
| AACAAGTGTAGCTGATACAG+TGG | 0.613356 | 4_1:+67589045 | None:intergenic |
| ACATCACTGCAATAATGAGT+AGG | 0.620734 | 4_1:+67588407 | None:intergenic |
| GCTTTGGCTCTAGCATCAAG+TGG | 0.633064 | 4_1:-67588571 | Msa0566490:CDS |
| AGTAAGAGGAACTGTAATTG+GGG | 0.643245 | 4_1:+67588970 | None:intergenic |
| TAAACTATACACTATCACAA+TGG | 0.670306 | 4_1:-67589173 | Msa0566490:exon |
| ACTGATTGCAGTATTTGACA+CGG | 0.674366 | 4_1:-67588696 | Msa0566490:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAATTAGAGAGATTTTA+TGG | + | chr4_1:67588635-67588654 | None:intergenic | 15.0% |
| !!! | TTTAAATTAGAGAGATTTTA+TGG | + | chr4_1:67588635-67588654 | None:intergenic | 15.0% |
| !! | TAACTTAAATGATCAATTAG+AGG | + | chr4_1:67588890-67588909 | None:intergenic | 20.0% |
| !! | TAACTTAAATGATCAATTAG+AGG | + | chr4_1:67588890-67588909 | None:intergenic | 20.0% |
| !!! | TATTTTTTCTTCATTTCCTG+AGG | + | chr4_1:67588397-67588416 | None:intergenic | 25.0% |
| ! | AATGAAGAAAAAATAGAGTC+TGG | - | chr4_1:67588402-67588421 | Msa0566490:CDS | 25.0% |
| !! | TCACCTTATGATTTAATTTC+TGG | - | chr4_1:67588712-67588731 | Msa0566490:CDS | 25.0% |
| ! | TCACCAGAAATTAAATCATA+AGG | + | chr4_1:67588718-67588737 | None:intergenic | 25.0% |
| ! | AATTGTCAGTCTTCATAATT+TGG | - | chr4_1:67588767-67588786 | Msa0566490:CDS | 25.0% |
| ! | TAATTTGGTTATGATAGCAA+TGG | - | chr4_1:67588782-67588801 | Msa0566490:CDS | 25.0% |
| ! | ATGATAGCAATGGATATATT+AGG | - | chr4_1:67588792-67588811 | Msa0566490:CDS | 25.0% |
| !!! | TATTTTTTCTTCATTTCCTG+AGG | + | chr4_1:67588397-67588416 | None:intergenic | 25.0% |
| ! | AATGAAGAAAAAATAGAGTC+TGG | - | chr4_1:67588402-67588421 | Msa0566490:CDS | 25.0% |
| !! | TCACCTTATGATTTAATTTC+TGG | - | chr4_1:67588712-67588731 | Msa0566490:CDS | 25.0% |
| ! | TCACCAGAAATTAAATCATA+AGG | + | chr4_1:67588718-67588737 | None:intergenic | 25.0% |
| ! | AATTGTCAGTCTTCATAATT+TGG | - | chr4_1:67588767-67588786 | Msa0566490:CDS | 25.0% |
| ! | TAATTTGGTTATGATAGCAA+TGG | - | chr4_1:67588782-67588801 | Msa0566490:CDS | 25.0% |
| ! | ATGATAGCAATGGATATATT+AGG | - | chr4_1:67588792-67588811 | Msa0566490:CDS | 25.0% |
| !! | TTAATTTCTGGTGAGAATAC+AGG | - | chr4_1:67588724-67588743 | Msa0566490:CDS | 30.0% |
| GACCCAAATTTCATAACAAA+GGG | - | chr4_1:67588814-67588833 | Msa0566490:intron | 30.0% | |
| ! | AGCCCTTTGTTATGAAATTT+GGG | + | chr4_1:67588819-67588838 | None:intergenic | 30.0% |
| GATTAATTGGGTGAATTAGA+TGG | - | chr4_1:67588951-67588970 | Msa0566490:CDS | 30.0% | |
| AGCAACATTTATGTCAGAAT+TGG | - | chr4_1:67589005-67589024 | Msa0566490:CDS | 30.0% | |
| GCAACATTTATGTCAGAATT+GGG | - | chr4_1:67589006-67589025 | Msa0566490:CDS | 30.0% | |
| ATGGTAATTCACATGCAAAA+TGG | - | chr4_1:67589034-67589053 | Msa0566490:CDS | 30.0% | |
| !! | TAATTTGAGGAGTTTGTTGA+TGG | + | chr4_1:67589163-67589182 | None:intergenic | 30.0% |
| !! | TTAATTTCTGGTGAGAATAC+AGG | - | chr4_1:67588724-67588743 | Msa0566490:CDS | 30.0% |
| GACCCAAATTTCATAACAAA+GGG | - | chr4_1:67588814-67588833 | Msa0566490:intron | 30.0% | |
| ! | AGCCCTTTGTTATGAAATTT+GGG | + | chr4_1:67588819-67588838 | None:intergenic | 30.0% |
| GATTAATTGGGTGAATTAGA+TGG | - | chr4_1:67588951-67588970 | Msa0566490:CDS | 30.0% | |
| AGCAACATTTATGTCAGAAT+TGG | - | chr4_1:67589005-67589024 | Msa0566490:CDS | 30.0% | |
| GCAACATTTATGTCAGAATT+GGG | - | chr4_1:67589006-67589025 | Msa0566490:CDS | 30.0% | |
| ATGGTAATTCACATGCAAAA+TGG | - | chr4_1:67589034-67589053 | Msa0566490:CDS | 30.0% | |
| !! | TAATTTGAGGAGTTTGTTGA+TGG | + | chr4_1:67589163-67589182 | None:intergenic | 30.0% |
| AAAAGGATCCAATCCTTCTT+TGG | + | chr4_1:67588453-67588472 | None:intergenic | 35.0% | |
| AGTAAGAGGAACTGTAATTG+GGG | + | chr4_1:67588577-67588596 | None:intergenic | 35.0% | |
| CAGTAAGAGGAACTGTAATT+GGG | + | chr4_1:67588578-67588597 | None:intergenic | 35.0% | |
| ! | TTATGGACTAACACAAAAGC+TGG | + | chr4_1:67588618-67588637 | None:intergenic | 35.0% |
| ATGAAGACTGACAATTCCAT+TGG | + | chr4_1:67588763-67588782 | None:intergenic | 35.0% | |
| GGACCCAAATTTCATAACAA+AGG | - | chr4_1:67588813-67588832 | Msa0566490:intron | 35.0% | |
| ! | GAGCCCTTTGTTATGAAATT+TGG | + | chr4_1:67588820-67588839 | None:intergenic | 35.0% |
| ACTGATTGCAGTATTTGACA+CGG | - | chr4_1:67588848-67588867 | Msa0566490:intron | 35.0% | |
| CATTTATGTCAGAATTGGGA+AGG | - | chr4_1:67589010-67589029 | Msa0566490:CDS | 35.0% | |
| CCTTAATAGCCTCTTTCATT+GGG | - | chr4_1:67589106-67589125 | Msa0566490:CDS | 35.0% | |
| ACATCACTGCAATAATGAGT+AGG | + | chr4_1:67589140-67589159 | None:intergenic | 35.0% | |
| AAAAGGATCCAATCCTTCTT+TGG | + | chr4_1:67588453-67588472 | None:intergenic | 35.0% | |
| AGTAAGAGGAACTGTAATTG+GGG | + | chr4_1:67588577-67588596 | None:intergenic | 35.0% | |
| CAGTAAGAGGAACTGTAATT+GGG | + | chr4_1:67588578-67588597 | None:intergenic | 35.0% | |
| ! | TTATGGACTAACACAAAAGC+TGG | + | chr4_1:67588618-67588637 | None:intergenic | 35.0% |
| ATGAAGACTGACAATTCCAT+TGG | + | chr4_1:67588763-67588782 | None:intergenic | 35.0% | |
| GGACCCAAATTTCATAACAA+AGG | - | chr4_1:67588813-67588832 | Msa0566490:intron | 35.0% | |
| ! | GAGCCCTTTGTTATGAAATT+TGG | + | chr4_1:67588820-67588839 | None:intergenic | 35.0% |
| ACTGATTGCAGTATTTGACA+CGG | - | chr4_1:67588848-67588867 | Msa0566490:intron | 35.0% | |
| CATTTATGTCAGAATTGGGA+AGG | - | chr4_1:67589010-67589029 | Msa0566490:CDS | 35.0% | |
| CCTTAATAGCCTCTTTCATT+GGG | - | chr4_1:67589106-67589125 | Msa0566490:CDS | 35.0% | |
| ACATCACTGCAATAATGAGT+AGG | + | chr4_1:67589140-67589159 | None:intergenic | 35.0% | |
| AGACCAAACCAAAGAAGGAT+TGG | - | chr4_1:67588442-67588461 | Msa0566490:CDS | 40.0% | |
| GATCCAATCCTTCTTTGGTT+TGG | + | chr4_1:67588448-67588467 | None:intergenic | 40.0% | |
| ! | ATTGGATCCTTTTGTCCCTT+AGG | - | chr4_1:67588460-67588479 | Msa0566490:CDS | 40.0% |
| ! | TTGGATCCTTTTGTCCCTTA+GGG | - | chr4_1:67588461-67588480 | Msa0566490:CDS | 40.0% |
| CAAAAATGCAACCACCCTAA+GGG | + | chr4_1:67588478-67588497 | None:intergenic | 40.0% | |
| AACAAGTGTAGCTGATACAG+TGG | + | chr4_1:67588502-67588521 | None:intergenic | 40.0% | |
| ! | GGTAGCAACTACAAAGCTTT+TGG | + | chr4_1:67588544-67588563 | None:intergenic | 40.0% |
| ! | AGCTTTGTAGTTGCTACCAT+TGG | - | chr4_1:67588546-67588565 | Msa0566490:CDS | 40.0% |
| GCAGTAAGAGGAACTGTAAT+TGG | + | chr4_1:67588579-67588598 | None:intergenic | 40.0% | |
| GTGAGAATACAGGTACTTTG+TGG | - | chr4_1:67588734-67588753 | Msa0566490:CDS | 40.0% | |
| ATACTGCAATCAGTGCAAGT+TGG | + | chr4_1:67588842-67588861 | None:intergenic | 40.0% | |
| TTGGGTGAATTAGATGGCTT+TGG | - | chr4_1:67588957-67588976 | Msa0566490:CDS | 40.0% | |
| ATGTCAGAATTGGGAAGGAA+TGG | - | chr4_1:67589015-67589034 | Msa0566490:CDS | 40.0% | |
| TTTGAGTCCTATTGCAACAG+AGG | - | chr4_1:67589075-67589094 | Msa0566490:CDS | 40.0% | |
| GCCTTAATAGCCTCTTTCAT+TGG | - | chr4_1:67589105-67589124 | Msa0566490:CDS | 40.0% | |
| CCCAATGAAAGAGGCTATTA+AGG | + | chr4_1:67589109-67589128 | None:intergenic | 40.0% | |
| AGACCAAACCAAAGAAGGAT+TGG | - | chr4_1:67588442-67588461 | Msa0566490:CDS | 40.0% | |
| GATCCAATCCTTCTTTGGTT+TGG | + | chr4_1:67588448-67588467 | None:intergenic | 40.0% | |
| ! | ATTGGATCCTTTTGTCCCTT+AGG | - | chr4_1:67588460-67588479 | Msa0566490:CDS | 40.0% |
| ! | TTGGATCCTTTTGTCCCTTA+GGG | - | chr4_1:67588461-67588480 | Msa0566490:CDS | 40.0% |
| CAAAAATGCAACCACCCTAA+GGG | + | chr4_1:67588478-67588497 | None:intergenic | 40.0% | |
| AACAAGTGTAGCTGATACAG+TGG | + | chr4_1:67588502-67588521 | None:intergenic | 40.0% | |
| ! | GGTAGCAACTACAAAGCTTT+TGG | + | chr4_1:67588544-67588563 | None:intergenic | 40.0% |
| ! | AGCTTTGTAGTTGCTACCAT+TGG | - | chr4_1:67588546-67588565 | Msa0566490:CDS | 40.0% |
| GCAGTAAGAGGAACTGTAAT+TGG | + | chr4_1:67588579-67588598 | None:intergenic | 40.0% | |
| GTGAGAATACAGGTACTTTG+TGG | - | chr4_1:67588734-67588753 | Msa0566490:CDS | 40.0% | |
| ATACTGCAATCAGTGCAAGT+TGG | + | chr4_1:67588842-67588861 | None:intergenic | 40.0% | |
| TTGGGTGAATTAGATGGCTT+TGG | - | chr4_1:67588957-67588976 | Msa0566490:CDS | 40.0% | |
| ATGTCAGAATTGGGAAGGAA+TGG | - | chr4_1:67589015-67589034 | Msa0566490:CDS | 40.0% | |
| TTTGAGTCCTATTGCAACAG+AGG | - | chr4_1:67589075-67589094 | Msa0566490:CDS | 40.0% | |
| GCCTTAATAGCCTCTTTCAT+TGG | - | chr4_1:67589105-67589124 | Msa0566490:CDS | 40.0% | |
| CCCAATGAAAGAGGCTATTA+AGG | + | chr4_1:67589109-67589128 | None:intergenic | 40.0% | |
| TACACTATCACAATGGCCTC+AGG | - | chr4_1:67588378-67588397 | Msa0566490:CDS | 45.0% | |
| TCCTGAGACCAAACCAAAGA+AGG | - | chr4_1:67588437-67588456 | Msa0566490:CDS | 45.0% | |
| !! | TCCTTCTTTGGTTTGGTCTC+AGG | + | chr4_1:67588441-67588460 | None:intergenic | 45.0% |
| CCAAAAATGCAACCACCCTA+AGG | + | chr4_1:67588479-67588498 | None:intergenic | 45.0% | |
| ! | CCTTAGGGTGGTTGCATTTT+TGG | - | chr4_1:67588476-67588495 | Msa0566490:CDS | 45.0% |
| ! | TGTAATTGGGGTGCTACCAA+TGG | + | chr4_1:67588565-67588584 | None:intergenic | 45.0% |
| TGCTGAAACTTGGCAGTAAG+AGG | + | chr4_1:67588591-67588610 | None:intergenic | 45.0% | |
| AGCTGGAGTATGCTGAAACT+TGG | + | chr4_1:67588601-67588620 | None:intergenic | 45.0% | |
| AGGTACTTTGTGGTAGCCAA+TGG | - | chr4_1:67588744-67588763 | Msa0566490:CDS | 45.0% | |
| GAGAATGAGCCCAATGAAAG+AGG | + | chr4_1:67589118-67589137 | None:intergenic | 45.0% | |
| TACACTATCACAATGGCCTC+AGG | - | chr4_1:67588378-67588397 | Msa0566490:CDS | 45.0% | |
| TCCTGAGACCAAACCAAAGA+AGG | - | chr4_1:67588437-67588456 | Msa0566490:CDS | 45.0% | |
| !! | TCCTTCTTTGGTTTGGTCTC+AGG | + | chr4_1:67588441-67588460 | None:intergenic | 45.0% |
| CCAAAAATGCAACCACCCTA+AGG | + | chr4_1:67588479-67588498 | None:intergenic | 45.0% | |
| ! | CCTTAGGGTGGTTGCATTTT+TGG | - | chr4_1:67588476-67588495 | Msa0566490:CDS | 45.0% |
| ! | TGTAATTGGGGTGCTACCAA+TGG | + | chr4_1:67588565-67588584 | None:intergenic | 45.0% |
| TGCTGAAACTTGGCAGTAAG+AGG | + | chr4_1:67588591-67588610 | None:intergenic | 45.0% | |
| AGCTGGAGTATGCTGAAACT+TGG | + | chr4_1:67588601-67588620 | None:intergenic | 45.0% | |
| AGGTACTTTGTGGTAGCCAA+TGG | - | chr4_1:67588744-67588763 | Msa0566490:CDS | 45.0% | |
| GAGAATGAGCCCAATGAAAG+AGG | + | chr4_1:67589118-67589137 | None:intergenic | 45.0% | |
| !!! | TTATATTTTTTTTGATTAAT+TGG | - | chr4_1:67588938-67588957 | Msa0566490:intron | 5.0% |
| !!! | TATATTTTTTTTGATTAATT+GGG | - | chr4_1:67588939-67588958 | Msa0566490:intron | 5.0% |
| !!! | TTATATTTTTTTTGATTAAT+TGG | - | chr4_1:67588938-67588957 | Msa0566490:intron | 5.0% |
| !!! | TATATTTTTTTTGATTAATT+GGG | - | chr4_1:67588939-67588958 | Msa0566490:intron | 5.0% |
| ! | GATCCTTTTGTCCCTTAGGG+TGG | - | chr4_1:67588464-67588483 | Msa0566490:CDS | 50.0% |
| CAACCACCCTAAGGGACAAA+AGG | + | chr4_1:67588470-67588489 | None:intergenic | 50.0% | |
| !! | GCTTTGGCTCTAGCATCAAG+TGG | - | chr4_1:67588973-67588992 | Msa0566490:CDS | 50.0% |
| GCTCTAGCATCAAGTGGAGA+TGG | - | chr4_1:67588979-67588998 | Msa0566490:CDS | 50.0% | |
| GAGTCCTATTGCAACAGAGG+TGG | - | chr4_1:67589078-67589097 | Msa0566490:CDS | 50.0% | |
| TCCTATTGCAACAGAGGTGG+TGG | - | chr4_1:67589081-67589100 | Msa0566490:CDS | 50.0% | |
| ACCACCACCTCTGTTGCAAT+AGG | + | chr4_1:67589085-67589104 | None:intergenic | 50.0% | |
| ! | GATCCTTTTGTCCCTTAGGG+TGG | - | chr4_1:67588464-67588483 | Msa0566490:CDS | 50.0% |
| CAACCACCCTAAGGGACAAA+AGG | + | chr4_1:67588470-67588489 | None:intergenic | 50.0% | |
| !! | GCTTTGGCTCTAGCATCAAG+TGG | - | chr4_1:67588973-67588992 | Msa0566490:CDS | 50.0% |
| GCTCTAGCATCAAGTGGAGA+TGG | - | chr4_1:67588979-67588998 | Msa0566490:CDS | 50.0% | |
| GAGTCCTATTGCAACAGAGG+TGG | - | chr4_1:67589078-67589097 | Msa0566490:CDS | 50.0% | |
| TCCTATTGCAACAGAGGTGG+TGG | - | chr4_1:67589081-67589100 | Msa0566490:CDS | 50.0% | |
| ACCACCACCTCTGTTGCAAT+AGG | + | chr4_1:67589085-67589104 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 67588372 | 67589194 | 67588372 | ID=Msa0566490;Name=Msa0566490 |
| chr4_1 | mRNA | 67588372 | 67589194 | 67588372 | ID=Msa0566490-mRNA-1;Parent=Msa0566490;Name=Msa0566490-mRNA-1;_AED=0.10;_eAED=0.10;_QI=18|1|0.66|1|1|1|3|0|194 |
| chr4_1 | exon | 67588372 | 67588596 | 67588372 | ID=Msa0566490-mRNA-1:exon:22185;Parent=Msa0566490-mRNA-1 |
| chr4_1 | exon | 67588697 | 67588820 | 67588697 | ID=Msa0566490-mRNA-1:exon:22184;Parent=Msa0566490-mRNA-1 |
| chr4_1 | exon | 67588941 | 67589194 | 67588941 | ID=Msa0566490-mRNA-1:exon:22183;Parent=Msa0566490-mRNA-1 |
| chr4_1 | five_prime_UTR | 67589177 | 67589194 | 67589177 | ID=Msa0566490-mRNA-1:five_prime_utr;Parent=Msa0566490-mRNA-1 |
| chr4_1 | CDS | 67588941 | 67589176 | 67588941 | ID=Msa0566490-mRNA-1:cds;Parent=Msa0566490-mRNA-1 |
| chr4_1 | CDS | 67588697 | 67588820 | 67588697 | ID=Msa0566490-mRNA-1:cds;Parent=Msa0566490-mRNA-1 |
| chr4_1 | CDS | 67588372 | 67588596 | 67588372 | ID=Msa0566490-mRNA-1:cds;Parent=Msa0566490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
