Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01627.t1 | XP_003593787.2 | 92.3 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 9.50E-135 | 489.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01627.t1 | Q8LFP7 | 70.7 | 249 | 66 | 1 | 22 | 263 | 38 | 286 | 1.3e-95 | 350.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01627.t1 | G7ILK8 | 92.3 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 6.9e-135 | 489.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01627.t1 | MTR_2g017590 | 92.251 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 0.0 | 509 |
MS.gene01627.t1 | MTR_2g017620 | 92.674 | 273 | 15 | 2 | 1 | 271 | 1 | 270 | 0.0 | 504 |
MS.gene01627.t1 | MTR_2g017620 | 93.750 | 256 | 16 | 0 | 13 | 268 | 1 | 256 | 1.47e-177 | 489 |
MS.gene01627.t1 | MTR_2g017570 | 80.524 | 267 | 52 | 0 | 5 | 271 | 7 | 273 | 5.39e-161 | 448 |
MS.gene01627.t1 | MTR_2g017610 | 80.524 | 267 | 52 | 0 | 5 | 271 | 7 | 273 | 1.07e-160 | 447 |
MS.gene01627.t1 | MTR_8g087720 | 74.713 | 261 | 66 | 0 | 5 | 265 | 7 | 267 | 5.21e-146 | 410 |
MS.gene01627.t1 | MTR_8g087710 | 67.939 | 262 | 84 | 0 | 10 | 271 | 13 | 274 | 2.03e-132 | 375 |
MS.gene01627.t1 | MTR_2g017660 | 65.693 | 274 | 85 | 2 | 1 | 265 | 1 | 274 | 3.44e-130 | 370 |
MS.gene01627.t1 | MTR_2g017620 | 94.271 | 192 | 8 | 1 | 80 | 271 | 1 | 189 | 2.90e-129 | 364 |
MS.gene01627.t1 | MTR_8g087720 | 74.872 | 195 | 49 | 0 | 5 | 199 | 7 | 201 | 1.22e-103 | 300 |
MS.gene01627.t1 | MTR_4g084880 | 58.974 | 234 | 94 | 1 | 32 | 263 | 31 | 264 | 9.15e-99 | 290 |
MS.gene01627.t1 | MTR_8g087720 | 72.472 | 178 | 49 | 0 | 5 | 182 | 7 | 184 | 3.18e-90 | 266 |
MS.gene01627.t1 | MTR_5g079570 | 53.414 | 249 | 107 | 3 | 6 | 251 | 12 | 254 | 1.12e-89 | 267 |
MS.gene01627.t1 | MTR_3g008920 | 54.393 | 239 | 106 | 2 | 16 | 254 | 8 | 243 | 2.38e-86 | 258 |
MS.gene01627.t1 | MTR_4g006730 | 49.799 | 249 | 118 | 2 | 15 | 260 | 54 | 298 | 2.13e-73 | 227 |
MS.gene01627.t1 | MTR_2g104940 | 49.206 | 252 | 119 | 3 | 14 | 260 | 56 | 303 | 1.30e-71 | 223 |
MS.gene01627.t1 | MTR_7g010650 | 46.696 | 227 | 119 | 2 | 36 | 262 | 37 | 261 | 3.51e-69 | 215 |
MS.gene01627.t1 | MTR_5g063930 | 45.865 | 266 | 129 | 6 | 1 | 258 | 1 | 259 | 3.70e-68 | 212 |
MS.gene01627.t1 | MTR_1g097840 | 49.573 | 234 | 107 | 3 | 32 | 257 | 70 | 300 | 1.55e-67 | 212 |
MS.gene01627.t1 | MTR_4g006630 | 52.093 | 215 | 96 | 2 | 49 | 260 | 1 | 211 | 1.05e-66 | 207 |
MS.gene01627.t1 | MTR_4g006730 | 52.093 | 215 | 96 | 2 | 49 | 260 | 1 | 211 | 1.66e-66 | 206 |
MS.gene01627.t1 | MTR_1g070385 | 43.662 | 213 | 119 | 1 | 38 | 250 | 64 | 275 | 2.57e-50 | 177 |
MS.gene01627.t1 | MTR_4g006730 | 44.292 | 219 | 103 | 3 | 14 | 229 | 53 | 255 | 2.29e-47 | 159 |
MS.gene01627.t1 | MTR_1g097840 | 52.047 | 171 | 75 | 2 | 32 | 199 | 70 | 236 | 3.40e-44 | 150 |
MS.gene01627.t1 | MTR_7g010650 | 41.667 | 144 | 83 | 1 | 36 | 179 | 37 | 179 | 1.55e-35 | 126 |
MS.gene01627.t1 | MTR_1g006490 | 39.336 | 211 | 118 | 7 | 35 | 238 | 18 | 225 | 1.15e-29 | 112 |
MS.gene01627.t1 | MTR_8g013680 | 33.193 | 238 | 148 | 6 | 28 | 254 | 9 | 246 | 1.11e-28 | 110 |
MS.gene01627.t1 | MTR_2g101370 | 33.469 | 245 | 151 | 6 | 19 | 254 | 6 | 247 | 6.10e-28 | 108 |
MS.gene01627.t1 | MTR_6g069040 | 32.510 | 243 | 153 | 6 | 19 | 251 | 2 | 243 | 1.25e-27 | 107 |
MS.gene01627.t1 | MTR_1g077540 | 32.231 | 242 | 155 | 4 | 19 | 251 | 2 | 243 | 1.73e-27 | 107 |
MS.gene01627.t1 | MTR_4g006650 | 45.517 | 145 | 63 | 3 | 37 | 178 | 5 | 136 | 1.54e-25 | 103 |
MS.gene01627.t1 | MTR_5g012810 | 35.242 | 227 | 136 | 6 | 22 | 238 | 3 | 228 | 2.26e-24 | 98.6 |
MS.gene01627.t1 | MTR_1g006590 | 33.906 | 233 | 145 | 6 | 35 | 261 | 18 | 247 | 2.87e-24 | 98.2 |
MS.gene01627.t1 | MTR_4g063090 | 33.632 | 223 | 139 | 5 | 41 | 255 | 26 | 247 | 1.32e-22 | 94.0 |
MS.gene01627.t1 | MTR_7g103030 | 31.878 | 229 | 145 | 5 | 13 | 234 | 1 | 225 | 3.72e-22 | 92.8 |
MS.gene01627.t1 | MTR_1g115405 | 32.911 | 237 | 145 | 6 | 35 | 261 | 20 | 252 | 5.24e-21 | 89.7 |
MS.gene01627.t1 | MTR_2g094270 | 29.778 | 225 | 134 | 5 | 34 | 235 | 38 | 261 | 1.62e-17 | 80.5 |
MS.gene01627.t1 | MTR_7g101190 | 29.218 | 243 | 151 | 5 | 14 | 235 | 17 | 259 | 1.86e-17 | 80.5 |
MS.gene01627.t1 | MTR_7g023350 | 33.175 | 211 | 128 | 5 | 35 | 235 | 20 | 227 | 3.59e-17 | 79.0 |
MS.gene01627.t1 | MTR_4g415300 | 32.075 | 212 | 129 | 6 | 39 | 235 | 59 | 270 | 5.21e-17 | 79.3 |
MS.gene01627.t1 | MTR_5g010150 | 31.925 | 213 | 129 | 5 | 39 | 235 | 55 | 267 | 5.35e-17 | 79.3 |
MS.gene01627.t1 | MTR_5g082070 | 31.944 | 216 | 125 | 6 | 39 | 235 | 58 | 270 | 5.93e-17 | 79.0 |
MS.gene01627.t1 | MTR_3g070210 | 32.243 | 214 | 127 | 7 | 39 | 235 | 58 | 270 | 8.24e-17 | 78.6 |
MS.gene01627.t1 | MTR_3g118010 | 29.680 | 219 | 139 | 4 | 34 | 237 | 35 | 253 | 1.27e-16 | 78.2 |
MS.gene01627.t1 | MTR_8g098375 | 31.776 | 214 | 128 | 7 | 39 | 235 | 55 | 267 | 6.35e-16 | 76.3 |
MS.gene01627.t1 | MTR_2g060360 | 31.100 | 209 | 136 | 4 | 35 | 236 | 18 | 225 | 2.25e-15 | 74.3 |
MS.gene01627.t1 | MTR_2g094270 | 28.708 | 209 | 128 | 4 | 34 | 222 | 38 | 245 | 2.86e-14 | 71.2 |
MS.gene01627.t1 | MTR_3g070210 | 31.658 | 199 | 121 | 6 | 39 | 223 | 58 | 255 | 5.80e-14 | 70.5 |
MS.gene01627.t1 | MTR_1g095070 | 28.571 | 182 | 114 | 4 | 78 | 245 | 24 | 203 | 4.11e-13 | 67.4 |
MS.gene01627.t1 | MTR_4g059390 | 27.354 | 223 | 141 | 5 | 34 | 235 | 37 | 259 | 4.45e-13 | 68.2 |
MS.gene01627.t1 | MTR_4g075590 | 25.112 | 223 | 139 | 7 | 39 | 236 | 40 | 259 | 2.09e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene01627.t1 | AT4G18910 | 65.108 | 278 | 81 | 2 | 2 | 263 | 9 | 286 | 1.47e-127 | 364 |
MS.gene01627.t1 | AT4G19030 | 61.246 | 289 | 86 | 4 | 1 | 263 | 1 | 289 | 5.69e-122 | 350 |
MS.gene01627.t1 | AT5G37820 | 59.438 | 249 | 98 | 1 | 20 | 268 | 30 | 275 | 3.81e-101 | 296 |
MS.gene01627.t1 | AT5G37820 | 59.438 | 249 | 98 | 1 | 20 | 268 | 66 | 311 | 1.26e-100 | 296 |
MS.gene01627.t1 | AT5G37810 | 59.751 | 241 | 94 | 1 | 23 | 263 | 33 | 270 | 1.04e-99 | 293 |
MS.gene01627.t1 | AT1G31885 | 51.481 | 270 | 116 | 3 | 1 | 257 | 4 | 271 | 3.60e-94 | 280 |
MS.gene01627.t1 | AT4G18910 | 64.486 | 214 | 60 | 2 | 2 | 199 | 9 | 222 | 2.44e-89 | 265 |
MS.gene01627.t1 | AT1G31885 | 56.682 | 217 | 87 | 1 | 48 | 257 | 1 | 217 | 1.45e-86 | 259 |
MS.gene01627.t1 | AT4G19030 | 60.444 | 225 | 63 | 4 | 1 | 199 | 1 | 225 | 2.79e-86 | 257 |
MS.gene01627.t1 | AT2G34390 | 55.230 | 239 | 99 | 2 | 32 | 263 | 44 | 281 | 2.90e-85 | 256 |
MS.gene01627.t1 | AT2G34390 | 54.978 | 231 | 96 | 2 | 37 | 260 | 7 | 236 | 2.95e-83 | 250 |
MS.gene01627.t1 | AT4G19030 | 58.049 | 205 | 60 | 4 | 1 | 179 | 1 | 205 | 1.98e-74 | 226 |
MS.gene01627.t1 | AT1G80760 | 54.505 | 222 | 96 | 2 | 31 | 250 | 75 | 293 | 6.73e-72 | 223 |
MS.gene01627.t1 | AT4G10380 | 49.593 | 246 | 107 | 4 | 25 | 257 | 63 | 304 | 3.22e-69 | 216 |
MS.gene01627.t1 | AT2G34390 | 58.857 | 175 | 64 | 2 | 32 | 199 | 44 | 217 | 4.55e-64 | 200 |
MS.gene01627.t1 | AT2G34390 | 57.325 | 157 | 59 | 2 | 32 | 181 | 44 | 199 | 1.38e-55 | 179 |
MS.gene01627.t1 | AT3G06100 | 41.743 | 218 | 125 | 2 | 35 | 251 | 45 | 261 | 1.42e-47 | 160 |
MS.gene01627.t1 | AT3G06100 | 42.056 | 214 | 122 | 2 | 39 | 251 | 1 | 213 | 4.88e-47 | 157 |
MS.gene01627.t1 | AT1G31885 | 48.305 | 118 | 53 | 2 | 1 | 112 | 4 | 119 | 3.30e-32 | 115 |
MS.gene01627.t1 | AT3G16240 | 36.406 | 217 | 129 | 4 | 27 | 234 | 8 | 224 | 4.16e-31 | 116 |
MS.gene01627.t1 | AT2G29870 | 58.621 | 87 | 36 | 0 | 151 | 237 | 20 | 106 | 5.78e-30 | 110 |
MS.gene01627.t1 | AT5G47450 | 36.123 | 227 | 135 | 5 | 22 | 238 | 3 | 229 | 4.45e-29 | 111 |
MS.gene01627.t1 | AT1G17810 | 32.669 | 251 | 152 | 6 | 22 | 258 | 13 | 260 | 1.91e-25 | 102 |
MS.gene01627.t1 | AT4G17340 | 34.906 | 212 | 130 | 4 | 35 | 238 | 18 | 229 | 1.99e-25 | 101 |
MS.gene01627.t1 | AT3G06100 | 38.732 | 142 | 85 | 2 | 112 | 252 | 41 | 181 | 3.61e-25 | 99.4 |
MS.gene01627.t1 | AT1G73190 | 31.600 | 250 | 140 | 6 | 22 | 251 | 13 | 251 | 1.94e-24 | 99.4 |
MS.gene01627.t1 | AT2G36830 | 34.052 | 232 | 137 | 6 | 13 | 234 | 1 | 226 | 8.72e-24 | 97.1 |
MS.gene01627.t1 | AT3G26520 | 35.833 | 240 | 137 | 9 | 31 | 258 | 17 | 251 | 1.14e-23 | 96.7 |
MS.gene01627.t1 | AT2G25810 | 36.493 | 211 | 124 | 7 | 35 | 238 | 18 | 225 | 5.68e-23 | 94.7 |
MS.gene01627.t1 | AT4G01470 | 32.900 | 231 | 143 | 6 | 13 | 235 | 1 | 227 | 7.94e-21 | 89.4 |
MS.gene01627.t1 | AT4G35100 | 31.963 | 219 | 134 | 5 | 34 | 237 | 36 | 254 | 8.06e-19 | 84.3 |
MS.gene01627.t1 | AT4G35100 | 31.963 | 219 | 134 | 5 | 34 | 237 | 36 | 254 | 8.06e-19 | 84.3 |
MS.gene01627.t1 | AT2G16850 | 30.594 | 219 | 137 | 5 | 34 | 237 | 34 | 252 | 2.21e-18 | 82.8 |
MS.gene01627.t1 | AT5G60660 | 26.502 | 283 | 180 | 7 | 3 | 261 | 6 | 284 | 3.77e-18 | 82.4 |
MS.gene01627.t1 | AT3G54820 | 27.668 | 253 | 162 | 5 | 14 | 245 | 16 | 268 | 1.35e-17 | 80.9 |
MS.gene01627.t1 | AT3G47440 | 29.680 | 219 | 138 | 5 | 35 | 242 | 22 | 235 | 3.72e-17 | 79.3 |
MS.gene01627.t1 | AT2G39010 | 31.771 | 192 | 119 | 3 | 66 | 245 | 77 | 268 | 3.97e-17 | 79.7 |
MS.gene01627.t1 | AT3G61430 | 31.455 | 213 | 129 | 6 | 39 | 235 | 55 | 266 | 2.68e-16 | 77.4 |
MS.gene01627.t1 | AT3G61430 | 31.455 | 213 | 129 | 6 | 39 | 235 | 55 | 266 | 2.68e-16 | 77.4 |
MS.gene01627.t1 | AT1G01620 | 31.628 | 215 | 126 | 5 | 39 | 235 | 55 | 266 | 3.29e-16 | 77.0 |
MS.gene01627.t1 | AT4G00430 | 31.628 | 215 | 126 | 5 | 39 | 235 | 56 | 267 | 5.91e-16 | 76.3 |
MS.gene01627.t1 | AT3G53420 | 31.383 | 188 | 117 | 4 | 70 | 245 | 82 | 269 | 6.65e-16 | 76.3 |
MS.gene01627.t1 | AT3G53420 | 31.383 | 188 | 117 | 4 | 70 | 245 | 82 | 269 | 6.65e-16 | 76.3 |
MS.gene01627.t1 | AT1G01620 | 33.158 | 190 | 109 | 4 | 61 | 235 | 8 | 194 | 8.17e-16 | 74.7 |
MS.gene01627.t1 | AT2G37170 | 27.039 | 233 | 149 | 5 | 34 | 245 | 35 | 267 | 1.76e-15 | 75.1 |
MS.gene01627.t1 | AT4G23400 | 31.163 | 215 | 127 | 5 | 39 | 235 | 56 | 267 | 2.56e-15 | 74.7 |
MS.gene01627.t1 | AT2G37170 | 27.039 | 233 | 149 | 5 | 34 | 245 | 78 | 310 | 2.84e-15 | 74.7 |
MS.gene01627.t1 | AT2G45960 | 30.986 | 213 | 130 | 6 | 39 | 235 | 55 | 266 | 4.22e-15 | 73.9 |
MS.gene01627.t1 | AT2G37180 | 27.542 | 236 | 144 | 6 | 34 | 245 | 35 | 267 | 6.26e-14 | 70.5 |
MS.gene01627.t1 | AT2G45960 | 31.282 | 195 | 120 | 5 | 39 | 220 | 55 | 248 | 7.60e-13 | 67.4 |
MS.gene01627.t1 | AT2G45960 | 31.282 | 195 | 120 | 5 | 39 | 220 | 55 | 248 | 8.78e-13 | 67.4 |
Find 76 sgRNAs with CRISPR-Local
Find 170 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGCCTCCTGAACCTTTA+AGG | 0.050929 | 2.2:+66729133 | None:intergenic |
TACCTTATGTTCGTCATTTC+TGG | 0.054064 | 2.2:-66730673 | MS.gene01627:CDS |
AAGAGTTCTTCATTCCTTAA+AGG | 0.183271 | 2.2:-66729147 | MS.gene01627:CDS |
TCCTGGAATTGCAATTGTTT+GGG | 0.271099 | 2.2:-66731455 | MS.gene01627:CDS |
TTCCTGGAATTGCAATTGTT+TGG | 0.289298 | 2.2:-66731456 | MS.gene01627:CDS |
ACATTCTTCTTGATATTTGC+TGG | 0.306945 | 2.2:-66731526 | MS.gene01627:CDS |
GGGACTTGTTGTTATGGTAT+TGG | 0.326696 | 2.2:-66731434 | MS.gene01627:CDS |
TCTTCATTCCTTAAAGGTTC+AGG | 0.328531 | 2.2:-66729141 | MS.gene01627:CDS |
GTCACCAATTCTAGGAGCTT+TGG | 0.344731 | 2.2:-66729229 | MS.gene01627:CDS |
GATAAAGTAGTGACACTTCC+TGG | 0.350687 | 2.2:-66731472 | MS.gene01627:CDS |
CCCCAAACAATTGCAATTCC+AGG | 0.359255 | 2.2:+66731454 | None:intergenic |
ATGCTAAATGTGTTGTTTGC+GGG | 0.360277 | 2.2:-66729496 | MS.gene01627:CDS |
ATTGCTTCAGATTGGTGAAT+TGG | 0.364133 | 2.2:-66729545 | MS.gene01627:intron |
TATATTGTGTCACCAATTCT+AGG | 0.367135 | 2.2:-66729237 | MS.gene01627:CDS |
TCCATATTCCTCTATATTGA+TGG | 0.376585 | 2.2:+66729262 | None:intergenic |
TTGTTATTTACCTGCTTCAA+TGG | 0.377213 | 2.2:+66731334 | None:intergenic |
TCACTACTTTATCATTGTTA+AGG | 0.387999 | 2.2:+66731482 | None:intergenic |
GGCAAGGAAAATCAATTTGC+AGG | 0.388137 | 2.2:-66730754 | MS.gene01627:CDS |
ATGAATCCAGCACGAAGCTT+AGG | 0.404724 | 2.2:-66729300 | MS.gene01627:CDS |
CCAGCCAAAGCTCCTAGAAT+TGG | 0.414721 | 2.2:+66729225 | None:intergenic |
CTGCTTCAATGGAAACCTTC+CGG | 0.415943 | 2.2:+66731345 | None:intergenic |
TGTTTGGGGACTTGTTGTTA+TGG | 0.418172 | 2.2:-66731440 | MS.gene01627:CDS |
TTCTTGATATTTGCTGGATG+TGG | 0.422703 | 2.2:-66731520 | MS.gene01627:CDS |
TATTCTGTTGGTCATATCTC+TGG | 0.429208 | 2.2:-66731409 | MS.gene01627:CDS |
ATTCGACCACAAAAGCTTGA+TGG | 0.429541 | 2.2:+66730710 | None:intergenic |
ACCATCAATATAGAGGAATA+TGG | 0.435935 | 2.2:-66729263 | MS.gene01627:CDS |
TAGGAGCTTTGGCTGGTACA+TGG | 0.439292 | 2.2:-66729218 | MS.gene01627:CDS |
AGGAACACTTCCAGCTGGTT+CGG | 0.440308 | 2.2:-66730734 | MS.gene01627:CDS |
TTTAAGGAATGAAGAACTCT+TGG | 0.440905 | 2.2:+66729149 | None:intergenic |
ATGGTATTGGTCTATTCTGT+TGG | 0.454467 | 2.2:-66731421 | MS.gene01627:CDS |
CTCCAGAAATGACGAACATA+AGG | 0.455985 | 2.2:+66730671 | None:intergenic |
AGGAGCTTTGGCTGGTACAT+GGG | 0.457036 | 2.2:-66729217 | MS.gene01627:CDS |
GGTAGATCCAACTGCAAGTC+CGG | 0.459639 | 2.2:+66729522 | None:intergenic |
TATATAATTGCTCAGGTCGC+TGG | 0.466822 | 2.2:-66730817 | MS.gene01627:CDS |
TGAATCCAGCACGAAGCTTA+GGG | 0.467560 | 2.2:-66729299 | MS.gene01627:CDS |
ATTCATTGATGCTCCTGTGA+TGG | 0.469127 | 2.2:+66729317 | None:intergenic |
TTCATTGATGCTCCTGTGAT+GGG | 0.472526 | 2.2:+66729318 | None:intergenic |
TATTGATGGTGCACAATAGC+TGG | 0.476206 | 2.2:+66729276 | None:intergenic |
ACCTGAGCAATTATATAAGC+TGG | 0.501786 | 2.2:+66730823 | None:intergenic |
CTTCAGATTGGTGAATTGGC+CGG | 0.503592 | 2.2:-66729541 | MS.gene01627:intron |
CGGAAGGTTTCCATTGAAGC+AGG | 0.504912 | 2.2:-66731344 | MS.gene01627:intron |
CCTGGAATTGCAATTGTTTG+GGG | 0.511430 | 2.2:-66731454 | MS.gene01627:CDS |
GCTTGATGGTCCGAACCAGC+TGG | 0.512331 | 2.2:+66730724 | None:intergenic |
AATATAGTTGGTAGCAGAAG+TGG | 0.514295 | 2.2:-66731554 | MS.gene01627:intron |
CATGCTAAATGTGTTGTTTG+CGG | 0.516473 | 2.2:-66729497 | MS.gene01627:CDS |
ACCAGCTTATATAATTGCTC+AGG | 0.519565 | 2.2:-66730824 | MS.gene01627:CDS |
CTCTTGGTGAGCTCACGTAC+TGG | 0.527633 | 2.2:+66729165 | None:intergenic |
GCTGGCCCTAAGCTTCGTGC+TGG | 0.529585 | 2.2:+66729294 | None:intergenic |
AAGAGGAACATGATCATCAA+TGG | 0.530972 | 2.2:+66731681 | None:intergenic |
CCTTAAAGGTTCAGGAGGCA+AGG | 0.537530 | 2.2:-66729133 | MS.gene01627:CDS |
CCAATTCTAGGAGCTTTGGC+TGG | 0.544250 | 2.2:-66729225 | MS.gene01627:CDS |
TTTGCAGGAACACTTCCAGC+TGG | 0.556257 | 2.2:-66730739 | MS.gene01627:CDS |
GTGTGAGCAATGGTGACAGC+GGG | 0.558512 | 2.2:+66731373 | None:intergenic |
AACATGGGTGATATTAGCAA+TGG | 0.558983 | 2.2:-66731763 | MS.gene01627:CDS |
ACCATTGCTCACACTACCAC+CGG | 0.562160 | 2.2:-66731364 | MS.gene01627:CDS |
CTGGCTTATTAGTGATTCTG+AGG | 0.564075 | 2.2:+66729184 | None:intergenic |
TGCTGGATGTGGTTCTGTGG+TGG | 0.564205 | 2.2:-66731509 | MS.gene01627:CDS |
ATAGTTGGTAGCAGAAGTGG+TGG | 0.567543 | 2.2:-66731551 | MS.gene01627:intron |
GAATTGGCCGGACTTGCAGT+TGG | 0.569862 | 2.2:-66729529 | MS.gene01627:CDS |
CTTAAAGGTTCAGGAGGCAA+GGG | 0.575536 | 2.2:-66729132 | MS.gene01627:CDS |
TGCTAAATGTGTTGTTTGCG+GGG | 0.584865 | 2.2:-66729495 | MS.gene01627:intron |
ATTTGCTGGATGTGGTTCTG+TGG | 0.593346 | 2.2:-66731512 | MS.gene01627:CDS |
TCATTCCTTAAAGGTTCAGG+AGG | 0.593782 | 2.2:-66729138 | MS.gene01627:CDS |
ATTGTGCACCATCAATATAG+AGG | 0.594483 | 2.2:-66729270 | MS.gene01627:CDS |
CAAACTCATATTCAGTGGCA+AGG | 0.615382 | 2.2:-66730770 | MS.gene01627:CDS |
ATATTTGACAGACCCATCAC+AGG | 0.629986 | 2.2:-66729330 | MS.gene01627:intron |
GATTACCGCTCTATTATCAG+TGG | 0.642782 | 2.2:+66730645 | None:intergenic |
TAGCAATGGAAATCTTGATG+TGG | 0.656350 | 2.2:-66731749 | MS.gene01627:CDS |
TTGCTCACACTACCACCGGA+AGG | 0.656735 | 2.2:-66731360 | MS.gene01627:CDS |
GCTCTCAAACTCATATTCAG+TGG | 0.657642 | 2.2:-66730775 | MS.gene01627:CDS |
AAACAACACATTTAGCATGA+CGG | 0.666187 | 2.2:+66729501 | None:intergenic |
TCCGGTGGTAGTGTGAGCAA+TGG | 0.668876 | 2.2:+66731363 | None:intergenic |
CTTCAATGGAAACCTTCCGG+TGG | 0.695539 | 2.2:+66731348 | None:intergenic |
TAGTTGGTAGCAGAAGTGGT+GGG | 0.737512 | 2.2:-66731550 | MS.gene01627:CDS |
AGTGTGAGCAATGGTGACAG+CGG | 0.739883 | 2.2:+66731372 | None:intergenic |
AGTTGCCACTGATAATAGAG+CGG | 0.742875 | 2.2:-66730650 | MS.gene01627:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAATTAATAATATTT+TGG | + | chr2.2:66730020-66730039 | None:intergenic | 0.0% |
!! | ATAGTTTATGTTTAAAAAAA+TGG | - | chr2.2:66731230-66731249 | MS.gene01627:intron | 10.0% |
!!! | AAAAAATTAATTCTTGTTTA+TGG | - | chr2.2:66729252-66729271 | MS.gene01627:CDS | 10.0% |
!!! | AACATTTTTTTTTTAGATAA+GGG | + | chr2.2:66731065-66731084 | None:intergenic | 10.0% |
!!! | TTTATTTAATTTTTTCTTGT+AGG | - | chr2.2:66730034-66730053 | MS.gene01627:intron | 10.0% |
!! | CCATTCTATAATTATTTAAA+GGG | - | chr2.2:66730461-66730480 | MS.gene01627:intron | 15.0% |
!! | CCTTTAAATAATTATAGAAT+GGG | + | chr2.2:66730463-66730482 | None:intergenic | 15.0% |
!! | GAAAAGATTAATTAATATGA+TGG | + | chr2.2:66730554-66730573 | None:intergenic | 15.0% |
!! | TTATGATATAATATTTGGTA+AGG | + | chr2.2:66731427-66731446 | None:intergenic | 15.0% |
!!! | AAGCTTATTTTTTTATCATT+AGG | - | chr2.2:66731018-66731037 | MS.gene01627:intron | 15.0% |
!!! | CAACATTTTTTTTTTAGATA+AGG | + | chr2.2:66731066-66731085 | None:intergenic | 15.0% |
!!! | GCATTTTATGATATAATATT+TGG | + | chr2.2:66731432-66731451 | None:intergenic | 15.0% |
!! | ATCTAATTCTCTCAAAAAAA+AGG | + | chr2.2:66730935-66730954 | None:intergenic | 20.0% |
!! | ATCTTTATAACAAAAATGCT+TGG | - | chr2.2:66730257-66730276 | MS.gene01627:intron | 20.0% |
!! | ATGTTGTTGTATTTGATTAA+TGG | - | chr2.2:66731080-66731099 | MS.gene01627:intron | 20.0% |
!! | CCCATTCTATAATTATTTAA+AGG | - | chr2.2:66730460-66730479 | MS.gene01627:intron | 20.0% |
!! | CCCTTTAAATAATTATAGAA+TGG | + | chr2.2:66730464-66730483 | None:intergenic | 20.0% |
!! | TCTAATTCTCTCAAAAAAAA+GGG | + | chr2.2:66730934-66730953 | None:intergenic | 20.0% |
!!! | TGTTTTAGTATTGATTTTCT+GGG | - | chr2.2:66730795-66730814 | MS.gene01627:CDS | 20.0% |
!!! | TTTTATTTATTGCTTCAGAT+TGG | - | chr2.2:66731329-66731348 | MS.gene01627:intron | 20.0% |
! | AAATACAACAACATAAGACA+TGG | + | chr2.2:66730867-66730886 | None:intergenic | 25.0% |
! | ACTCGAAGAATTTATATAAG+AGG | + | chr2.2:66729779-66729798 | None:intergenic | 25.0% |
! | ATACAACAACATTGCTTATA+AGG | + | chr2.2:66730963-66730982 | None:intergenic | 25.0% |
! | ATGTCTTATGTTGTTGTATT+TGG | - | chr2.2:66730866-66730885 | MS.gene01627:intron | 25.0% |
! | CTTAAAAATACATTGTCATC+AGG | + | chr2.2:66730711-66730730 | None:intergenic | 25.0% |
! | GACAAAAACTATTTAGACAA+AGG | + | chr2.2:66731303-66731322 | None:intergenic | 25.0% |
! | TAAATTCTTCGAGTAATAGT+TGG | - | chr2.2:66729785-66729804 | MS.gene01627:intron | 25.0% |
! | TACAACAACATTGCTTATAA+GGG | + | chr2.2:66730962-66730981 | None:intergenic | 25.0% |
! | TACTTCTAATAACAAATGCA+AGG | + | chr2.2:66731114-66731133 | None:intergenic | 25.0% |
! | TACTTCTATTAACAAATGCA+AGG | + | chr2.2:66730772-66730791 | None:intergenic | 25.0% |
! | TCACTACTTTATCATTGTTA+AGG | + | chr2.2:66729403-66729422 | None:intergenic | 25.0% |
! | TCTCTCTTAAGTTATTTGAT+CGG | - | chr2.2:66729611-66729630 | MS.gene01627:intron | 25.0% |
!! | CAAATACAACATTGATCTTT+TGG | + | chr2.2:66730905-66730924 | None:intergenic | 25.0% |
!! | CATTGATTGTTGAATATAGT+TGG | - | chr2.2:66729316-66729335 | MS.gene01627:CDS | 25.0% |
!!! | AGCTAAGAGTTTAAAGTTTT+GGG | - | chr2.2:66729719-66729738 | MS.gene01627:intron | 25.0% |
!!! | GTGTTTTAGTATTGATTTTC+TGG | - | chr2.2:66730794-66730813 | MS.gene01627:CDS | 25.0% |
!!! | TCATCAGGTTAAGTTATTTT+GGG | + | chr2.2:66730696-66730715 | None:intergenic | 25.0% |
AAACAACACATTTAGCATGA+CGG | + | chr2.2:66731384-66731403 | None:intergenic | 30.0% | |
AACTATTTCCTTCTTCACAT+AGG | + | chr2.2:66729973-66729992 | None:intergenic | 30.0% | |
AAGAGTTCTTCATTCCTTAA+AGG | - | chr2.2:66731735-66731754 | MS.gene01627:CDS | 30.0% | |
ACATTCTTCTTGATATTTGC+TGG | - | chr2.2:66729356-66729375 | MS.gene01627:intron | 30.0% | |
ACCATCAATATAGAGGAATA+TGG | - | chr2.2:66731619-66731638 | MS.gene01627:intron | 30.0% | |
TATATTGTGTCACCAATTCT+AGG | - | chr2.2:66731645-66731664 | MS.gene01627:intron | 30.0% | |
TATCATATGCAATGTTGCAT+AGG | - | chr2.2:66731269-66731288 | MS.gene01627:intron | 30.0% | |
TATGTGAAGAAGGAAATAGT+TGG | - | chr2.2:66729972-66729991 | MS.gene01627:intron | 30.0% | |
TATTTCAACCACCTAAAATC+TGG | + | chr2.2:66729662-66729681 | None:intergenic | 30.0% | |
TCCATATTCCTCTATATTGA+TGG | + | chr2.2:66731623-66731642 | None:intergenic | 30.0% | |
TTAAGTTATTTGATCGGAGA+TGG | - | chr2.2:66729617-66729636 | MS.gene01627:intron | 30.0% | |
TTTAAGGAATGAAGAACTCT+TGG | + | chr2.2:66731736-66731755 | None:intergenic | 30.0% | |
! | GTCATCAGGTTAAGTTATTT+TGG | + | chr2.2:66730697-66730716 | None:intergenic | 30.0% |
! | TTGTATTTGGCTCAGAAAAT+TGG | - | chr2.2:66730879-66730898 | MS.gene01627:intron | 30.0% |
!! | AATATTTTGGACTGCACAAA+CGG | + | chr2.2:66730007-66730026 | None:intergenic | 30.0% |
!! | GAGCTAAGAGTTTAAAGTTT+TGG | - | chr2.2:66729718-66729737 | MS.gene01627:intron | 30.0% |
!! | GCTAAGAGTTTAAAGTTTTG+GGG | - | chr2.2:66729720-66729739 | MS.gene01627:intron | 30.0% |
!! | GTTACATGTTTTTGTGAGAA+AGG | - | chr2.2:66731498-66731517 | MS.gene01627:CDS | 30.0% |
!! | TTGTTATTTACCTGCTTCAA+TGG | + | chr2.2:66729551-66729570 | None:intergenic | 30.0% |
AAGAGGAACATGATCATCAA+TGG | + | chr2.2:66729204-66729223 | None:intergenic | 35.0% | |
AATACCTGCAAAAGACACAT+TGG | - | chr2.2:66729678-66729697 | MS.gene01627:intron | 35.0% | |
ACCAGCTTATATAATTGCTC+AGG | - | chr2.2:66730058-66730077 | MS.gene01627:intron | 35.0% | |
ACCTGAGCAATTATATAAGC+TGG | + | chr2.2:66730062-66730081 | None:intergenic | 35.0% | |
AGTAATAGTTGGAGAGTTGT+TGG | - | chr2.2:66729796-66729815 | MS.gene01627:intron | 35.0% | |
AGTTTCAACCTATGTGAAGA+AGG | - | chr2.2:66729962-66729981 | MS.gene01627:intron | 35.0% | |
ATAATTATAGAATGGGCCTC+AGG | + | chr2.2:66730456-66730475 | None:intergenic | 35.0% | |
ATATGCAATGTTGCATAGGT+TGG | - | chr2.2:66731273-66731292 | MS.gene01627:intron | 35.0% | |
ATTGCTTCAGATTGGTGAAT+TGG | - | chr2.2:66731337-66731356 | MS.gene01627:intron | 35.0% | |
ATTGTGCACCATCAATATAG+AGG | - | chr2.2:66731612-66731631 | MS.gene01627:intron | 35.0% | |
GCTCGATGTAGTAACAAAAT+GGG | - | chr2.2:66729913-66729932 | MS.gene01627:intron | 35.0% | |
TAACCTATGCAACATTGCAT+AGG | - | chr2.2:66730490-66730509 | MS.gene01627:intron | 35.0% | |
TACCTTATGTTCGTCATTTC+TGG | - | chr2.2:66730209-66730228 | MS.gene01627:intron | 35.0% | |
TAGCAATGGAAATCTTGATG+TGG | - | chr2.2:66729133-66729152 | MS.gene01627:CDS | 35.0% | |
TATCCTATGCAATGTTGCAT+AGG | + | chr2.2:66730496-66730515 | None:intergenic | 35.0% | |
TATTCTGTTGGTCATATCTC+TGG | - | chr2.2:66729473-66729492 | MS.gene01627:intron | 35.0% | |
TCCTGGAATTGCAATTGTTT+GGG | - | chr2.2:66729427-66729446 | MS.gene01627:intron | 35.0% | |
TCTTCATTCCTTAAAGGTTC+AGG | - | chr2.2:66731741-66731760 | MS.gene01627:CDS | 35.0% | |
TGCTCGATGTAGTAACAAAA+TGG | - | chr2.2:66729912-66729931 | MS.gene01627:intron | 35.0% | |
TTCCTGGAATTGCAATTGTT+TGG | - | chr2.2:66729426-66729445 | MS.gene01627:intron | 35.0% | |
! | AAAGTCACCTTTTGCAAAAG+AGG | + | chr2.2:66729221-66729240 | None:intergenic | 35.0% |
! | ACATAGGTTGAAACTTGCTT+TGG | + | chr2.2:66729957-66729976 | None:intergenic | 35.0% |
! | TCATGTTCCTCTTTTGCAAA+AGG | - | chr2.2:66729211-66729230 | MS.gene01627:CDS | 35.0% |
! | TTCTTGATATTTGCTGGATG+TGG | - | chr2.2:66729362-66729381 | MS.gene01627:intron | 35.0% |
!! | AATATAGTTGGTAGCAGAAG+TGG | - | chr2.2:66729328-66729347 | MS.gene01627:intron | 35.0% |
!! | ATGCTAAATGTGTTGTTTGC+GGG | - | chr2.2:66731386-66731405 | MS.gene01627:CDS | 35.0% |
!! | ATGGTATTGGTCTATTCTGT+TGG | - | chr2.2:66729461-66729480 | MS.gene01627:intron | 35.0% |
!! | CATGCTAAATGTGTTGTTTG+CGG | - | chr2.2:66731385-66731404 | MS.gene01627:CDS | 35.0% |
!! | TATAAGGGTGTCATCAAAGA+AGG | - | chr2.2:66730826-66730845 | MS.gene01627:CDS | 35.0% |
!!! | ATGACTAAGCGTTGATTTTC+TGG | + | chr2.2:66730997-66731016 | None:intergenic | 35.0% |
!!! | GGTTGTGTCATCACATTTTT+TGG | + | chr2.2:66729183-66729202 | None:intergenic | 35.0% |
!!! | TGACTAAGCGTTGATTTTCT+GGG | + | chr2.2:66730996-66731015 | None:intergenic | 35.0% |
AGTTGCCACTGATAATAGAG+CGG | - | chr2.2:66730232-66730251 | MS.gene01627:intron | 40.0% | |
ATATTTGACAGACCCATCAC+AGG | - | chr2.2:66731552-66731571 | MS.gene01627:intron | 40.0% | |
ATTCATTGATGCTCCTGTGA+TGG | + | chr2.2:66731568-66731587 | None:intergenic | 40.0% | |
ATTCGACCACAAAAGCTTGA+TGG | + | chr2.2:66730175-66730194 | None:intergenic | 40.0% | |
CAAACTCATATTCAGTGGCA+AGG | - | chr2.2:66730112-66730131 | MS.gene01627:intron | 40.0% | |
CCTGGAATTGCAATTGTTTG+GGG | - | chr2.2:66729428-66729447 | MS.gene01627:intron | 40.0% | |
CGATGTAGTAACAAAATGGG+TGG | - | chr2.2:66729916-66729935 | MS.gene01627:intron | 40.0% | |
CTCCAGAAATGACGAACATA+AGG | + | chr2.2:66730214-66730233 | None:intergenic | 40.0% | |
CTGGCTTATTAGTGATTCTG+AGG | + | chr2.2:66731701-66731720 | None:intergenic | 40.0% | |
GATAAAGTAGTGACACTTCC+TGG | - | chr2.2:66729410-66729429 | MS.gene01627:intron | 40.0% | |
GATTACCGCTCTATTATCAG+TGG | + | chr2.2:66730240-66730259 | None:intergenic | 40.0% | |
GCTCTCAAACTCATATTCAG+TGG | - | chr2.2:66730107-66730126 | MS.gene01627:intron | 40.0% | |
GGCAAGGAAAATCAATTTGC+AGG | - | chr2.2:66730128-66730147 | MS.gene01627:intron | 40.0% | |
TATATAATTGCTCAGGTCGC+TGG | - | chr2.2:66730065-66730084 | MS.gene01627:intron | 40.0% | |
TCAACCACCTAAAATCTGGT+CGG | + | chr2.2:66729658-66729677 | None:intergenic | 40.0% | |
TCATTCCTTAAAGGTTCAGG+AGG | - | chr2.2:66731744-66731763 | MS.gene01627:CDS | 40.0% | |
TTCATTGATGCTCCTGTGAT+GGG | + | chr2.2:66731567-66731586 | None:intergenic | 40.0% | |
! | AATAAAGGCGCAATGTGAGA+AGG | + | chr2.2:66729851-66729870 | None:intergenic | 40.0% |
! | TTCTGGGCTGTTGCTTATAA+GGG | - | chr2.2:66730811-66730830 | MS.gene01627:CDS | 40.0% |
! | TTTCTGGGCTGTTGCTTATA+AGG | - | chr2.2:66730810-66730829 | MS.gene01627:CDS | 40.0% |
!! | GGGACTTGTTGTTATGGTAT+TGG | - | chr2.2:66729448-66729467 | MS.gene01627:intron | 40.0% |
!! | TATTGATGGTGCACAATAGC+TGG | + | chr2.2:66731609-66731628 | None:intergenic | 40.0% |
!! | TGCTAAATGTGTTGTTTGCG+GGG | - | chr2.2:66731387-66731406 | MS.gene01627:CDS | 40.0% |
!! | TGTTTGGGGACTTGTTGTTA+TGG | - | chr2.2:66729442-66729461 | MS.gene01627:intron | 40.0% |
!! | TTAGCCTTAAATCAGTCCTG+AGG | - | chr2.2:66730437-66730456 | MS.gene01627:intron | 40.0% |
AATGGGTGGTGTGAAGAGTA+TGG | - | chr2.2:66729930-66729949 | MS.gene01627:intron | 45.0% | |
ATCGGAGATGGTCAGAAGAA+CGG | - | chr2.2:66729629-66729648 | MS.gene01627:intron | 45.0% | |
ATGAATCCAGCACGAAGCTT+AGG | - | chr2.2:66731582-66731601 | MS.gene01627:intron | 45.0% | |
CATTAGGAAGCCCAGCAAAT+TGG | - | chr2.2:66731034-66731053 | MS.gene01627:intron | 45.0% | |
CCCCAAACAATTGCAATTCC+AGG | + | chr2.2:66729431-66729450 | None:intergenic | 45.0% | |
CTGCTTCAATGGAAACCTTC+CGG | + | chr2.2:66729540-66729559 | None:intergenic | 45.0% | |
CTTAAAGGTTCAGGAGGCAA+GGG | - | chr2.2:66731750-66731769 | MS.gene01627:CDS | 45.0% | |
CTTCAGATTGGTGAATTGGC+CGG | - | chr2.2:66731341-66731360 | MS.gene01627:intron | 45.0% | |
GAAGAAGGAAATAGTTGGCG+AGG | - | chr2.2:66729977-66729996 | MS.gene01627:intron | 45.0% | |
GTTAGAAGAACGTACCTAGG+AGG | - | chr2.2:66729742-66729761 | MS.gene01627:intron | 45.0% | |
TGAATCCAGCACGAAGCTTA+GGG | - | chr2.2:66731583-66731602 | MS.gene01627:intron | 45.0% | |
! | AACGCCAATGTGTCTTTTGC+AGG | + | chr2.2:66729685-66729704 | None:intergenic | 45.0% |
! | ATTTGCTGGATGTGGTTCTG+TGG | - | chr2.2:66729370-66729389 | MS.gene01627:intron | 45.0% |
! | GTCACCAATTCTAGGAGCTT+TGG | - | chr2.2:66731653-66731672 | MS.gene01627:intron | 45.0% |
! | TTCGGACCATCAAGCTTTTG+TGG | - | chr2.2:66730166-66730185 | MS.gene01627:intron | 45.0% |
!! | AAGGGTGTCTCCAATTTGCT+GGG | + | chr2.2:66731047-66731066 | None:intergenic | 45.0% |
!! | ATAGTTGGTAGCAGAAGTGG+TGG | - | chr2.2:66729331-66729350 | MS.gene01627:intron | 45.0% |
!! | TAAGGGTGTCTCCAATTTGC+TGG | + | chr2.2:66731048-66731067 | None:intergenic | 45.0% |
!! | TAGTTGGTAGCAGAAGTGGT+GGG | - | chr2.2:66729332-66729351 | MS.gene01627:intron | 45.0% |
!!! | GCGTTGATTTTCTGGGAGTA+AGG | + | chr2.2:66730989-66731008 | None:intergenic | 45.0% |
!! | AAAAAAAAAAAAAAATAGAA+TGG | + | chr2.2:66730610-66730629 | None:intergenic | 5.0% |
!! | TAAATAAAAATGTATAATAT+TGG | + | chr2.2:66731465-66731484 | None:intergenic | 5.0% |
!!! | ATTATACATTTTTATTTAAT+AGG | - | chr2.2:66731467-66731486 | MS.gene01627:CDS | 5.0% |
!!! | TTATACATTTTTATTTAATA+GGG | - | chr2.2:66731468-66731487 | MS.gene01627:CDS | 5.0% |
ACCATTGCTCACACTACCAC+CGG | - | chr2.2:66729518-66729537 | MS.gene01627:CDS | 50.0% | |
AGGAACACTTCCAGCTGGTT+CGG | - | chr2.2:66730148-66730167 | MS.gene01627:intron | 50.0% | |
AGTGTGAGCAATGGTGACAG+CGG | + | chr2.2:66729513-66729532 | None:intergenic | 50.0% | |
CCAGCCAAAGCTCCTAGAAT+TGG | + | chr2.2:66731660-66731679 | None:intergenic | 50.0% | |
CCTTAAAGGTTCAGGAGGCA+AGG | - | chr2.2:66731749-66731768 | MS.gene01627:CDS | 50.0% | |
CCTTGCCTCCTGAACCTTTA+AGG | + | chr2.2:66731752-66731771 | None:intergenic | 50.0% | |
CGGAAGGTTTCCATTGAAGC+AGG | - | chr2.2:66729538-66729557 | MS.gene01627:CDS | 50.0% | |
CTTCAATGGAAACCTTCCGG+TGG | + | chr2.2:66729537-66729556 | None:intergenic | 50.0% | |
GGGGTTAGAAGAACGTACCT+AGG | - | chr2.2:66729739-66729758 | MS.gene01627:intron | 50.0% | |
GGTAGATCCAACTGCAAGTC+CGG | + | chr2.2:66731363-66731382 | None:intergenic | 50.0% | |
GTTGGAGAGTTGTTGGTCGA+CGG | - | chr2.2:66729803-66729822 | MS.gene01627:intron | 50.0% | |
TGTTGGTCGACGGTTACAGA+TGG | - | chr2.2:66729813-66729832 | MS.gene01627:intron | 50.0% | |
TTGCGCCTTTATTGCATGCG+AGG | - | chr2.2:66729858-66729877 | MS.gene01627:intron | 50.0% | |
TTTGCAGGAACACTTCCAGC+TGG | - | chr2.2:66730143-66730162 | MS.gene01627:intron | 50.0% | |
! | ACGGTGTCCGACCAGATTTT+AGG | - | chr2.2:66729648-66729667 | MS.gene01627:intron | 50.0% |
! | AGGACTTTTCGTGTCCTCCT+AGG | + | chr2.2:66729759-66729778 | None:intergenic | 50.0% |
! | AGGAGCTTTGGCTGGTACAT+GGG | - | chr2.2:66731665-66731684 | MS.gene01627:intron | 50.0% |
! | CCAATTCTAGGAGCTTTGGC+TGG | - | chr2.2:66731657-66731676 | MS.gene01627:intron | 50.0% |
! | GTGTCCGACCAGATTTTAGG+TGG | - | chr2.2:66729651-66729670 | MS.gene01627:intron | 50.0% |
! | TAGGAGCTTTGGCTGGTACA+TGG | - | chr2.2:66731664-66731683 | MS.gene01627:intron | 50.0% |
! | TGGGCCTCAGGACTGATTTA+AGG | + | chr2.2:66730444-66730463 | None:intergenic | 50.0% |
CGCCTCCTCGCATGCAATAA+AGG | + | chr2.2:66729866-66729885 | None:intergenic | 55.0% | |
CGCCTTTATTGCATGCGAGG+AGG | - | chr2.2:66729861-66729880 | MS.gene01627:intron | 55.0% | |
CTCTTGGTGAGCTCACGTAC+TGG | + | chr2.2:66731720-66731739 | None:intergenic | 55.0% | |
GAATTGGCCGGACTTGCAGT+TGG | - | chr2.2:66731353-66731372 | MS.gene01627:CDS | 55.0% | |
GTGTGAGCAATGGTGACAGC+GGG | + | chr2.2:66729512-66729531 | None:intergenic | 55.0% | |
TGGTCGACGGTTACAGATGG+CGG | - | chr2.2:66729816-66729835 | MS.gene01627:intron | 55.0% | |
TTGCTCACACTACCACCGGA+AGG | - | chr2.2:66729522-66729541 | MS.gene01627:CDS | 55.0% | |
! | TCCGGTGGTAGTGTGAGCAA+TGG | + | chr2.2:66729522-66729541 | None:intergenic | 55.0% |
! | TGCTGGATGTGGTTCTGTGG+TGG | - | chr2.2:66729373-66729392 | MS.gene01627:intron | 55.0% |
!! | CGAGGAGGCGTTACAGACTT+AGG | - | chr2.2:66729876-66729895 | MS.gene01627:intron | 55.0% |
! | GCTTGATGGTCCGAACCAGC+TGG | + | chr2.2:66730161-66730180 | None:intergenic | 60.0% |
GCTGGCCCTAAGCTTCGTGC+TGG | + | chr2.2:66731591-66731610 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.2 | gene | 66729122 | 66731782 | 66729122 | ID=MS.gene01627 |
chr2.2 | mRNA | 66729122 | 66731782 | 66729122 | ID=MS.gene01627.t1;Parent=MS.gene01627 |
chr2.2 | exon | 66731672 | 66731782 | 66731672 | ID=MS.gene01627.t1.exon1;Parent=MS.gene01627.t1 |
chr2.2 | CDS | 66731672 | 66731782 | 66731672 | ID=cds.MS.gene01627.t1;Parent=MS.gene01627.t1 |
chr2.2 | exon | 66731345 | 66731569 | 66731345 | ID=MS.gene01627.t1.exon2;Parent=MS.gene01627.t1 |
chr2.2 | CDS | 66731345 | 66731569 | 66731345 | ID=cds.MS.gene01627.t1;Parent=MS.gene01627.t1 |
chr2.2 | exon | 66730651 | 66730848 | 66730651 | ID=MS.gene01627.t1.exon3;Parent=MS.gene01627.t1 |
chr2.2 | CDS | 66730651 | 66730848 | 66730651 | ID=cds.MS.gene01627.t1;Parent=MS.gene01627.t1 |
chr2.2 | exon | 66729496 | 66729557 | 66729496 | ID=MS.gene01627.t1.exon4;Parent=MS.gene01627.t1 |
chr2.2 | CDS | 66729496 | 66729557 | 66729496 | ID=cds.MS.gene01627.t1;Parent=MS.gene01627.t1 |
chr2.2 | exon | 66729122 | 66729341 | 66729122 | ID=MS.gene01627.t1.exon5;Parent=MS.gene01627.t1 |
chr2.2 | CDS | 66729122 | 66729341 | 66729122 | ID=cds.MS.gene01627.t1;Parent=MS.gene01627.t1 |
Gene Sequence |
Protein sequence |