Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004324.t1 | XP_003593787.2 | 92.3 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 9.50E-135 | 489.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004324.t1 | Q8LFP7 | 70.7 | 249 | 66 | 1 | 22 | 263 | 38 | 286 | 1.3e-95 | 350.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004324.t1 | G7ILK8 | 92.3 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 6.9e-135 | 489.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004324.t1 | MTR_2g017590 | 92.251 | 271 | 20 | 1 | 1 | 271 | 1 | 270 | 0.0 | 509 |
MS.gene004324.t1 | MTR_2g017620 | 92.674 | 273 | 15 | 2 | 1 | 271 | 1 | 270 | 0.0 | 504 |
MS.gene004324.t1 | MTR_2g017620 | 93.750 | 256 | 16 | 0 | 13 | 268 | 1 | 256 | 1.47e-177 | 489 |
MS.gene004324.t1 | MTR_2g017570 | 80.524 | 267 | 52 | 0 | 5 | 271 | 7 | 273 | 5.39e-161 | 448 |
MS.gene004324.t1 | MTR_2g017610 | 80.524 | 267 | 52 | 0 | 5 | 271 | 7 | 273 | 1.07e-160 | 447 |
MS.gene004324.t1 | MTR_8g087720 | 74.713 | 261 | 66 | 0 | 5 | 265 | 7 | 267 | 5.21e-146 | 410 |
MS.gene004324.t1 | MTR_8g087710 | 67.939 | 262 | 84 | 0 | 10 | 271 | 13 | 274 | 2.03e-132 | 375 |
MS.gene004324.t1 | MTR_2g017660 | 65.693 | 274 | 85 | 2 | 1 | 265 | 1 | 274 | 3.44e-130 | 370 |
MS.gene004324.t1 | MTR_2g017620 | 94.271 | 192 | 8 | 1 | 80 | 271 | 1 | 189 | 2.90e-129 | 364 |
MS.gene004324.t1 | MTR_8g087720 | 74.872 | 195 | 49 | 0 | 5 | 199 | 7 | 201 | 1.22e-103 | 300 |
MS.gene004324.t1 | MTR_4g084880 | 58.974 | 234 | 94 | 1 | 32 | 263 | 31 | 264 | 9.15e-99 | 290 |
MS.gene004324.t1 | MTR_8g087720 | 72.472 | 178 | 49 | 0 | 5 | 182 | 7 | 184 | 3.18e-90 | 266 |
MS.gene004324.t1 | MTR_5g079570 | 53.414 | 249 | 107 | 3 | 6 | 251 | 12 | 254 | 1.12e-89 | 267 |
MS.gene004324.t1 | MTR_3g008920 | 54.393 | 239 | 106 | 2 | 16 | 254 | 8 | 243 | 2.38e-86 | 258 |
MS.gene004324.t1 | MTR_4g006730 | 49.799 | 249 | 118 | 2 | 15 | 260 | 54 | 298 | 2.13e-73 | 227 |
MS.gene004324.t1 | MTR_2g104940 | 49.206 | 252 | 119 | 3 | 14 | 260 | 56 | 303 | 1.30e-71 | 223 |
MS.gene004324.t1 | MTR_7g010650 | 46.696 | 227 | 119 | 2 | 36 | 262 | 37 | 261 | 3.51e-69 | 215 |
MS.gene004324.t1 | MTR_5g063930 | 45.865 | 266 | 129 | 6 | 1 | 258 | 1 | 259 | 3.70e-68 | 212 |
MS.gene004324.t1 | MTR_1g097840 | 49.573 | 234 | 107 | 3 | 32 | 257 | 70 | 300 | 1.55e-67 | 212 |
MS.gene004324.t1 | MTR_4g006630 | 52.093 | 215 | 96 | 2 | 49 | 260 | 1 | 211 | 1.05e-66 | 207 |
MS.gene004324.t1 | MTR_4g006730 | 52.093 | 215 | 96 | 2 | 49 | 260 | 1 | 211 | 1.66e-66 | 206 |
MS.gene004324.t1 | MTR_1g070385 | 43.662 | 213 | 119 | 1 | 38 | 250 | 64 | 275 | 2.57e-50 | 177 |
MS.gene004324.t1 | MTR_4g006730 | 44.292 | 219 | 103 | 3 | 14 | 229 | 53 | 255 | 2.29e-47 | 159 |
MS.gene004324.t1 | MTR_1g097840 | 52.047 | 171 | 75 | 2 | 32 | 199 | 70 | 236 | 3.40e-44 | 150 |
MS.gene004324.t1 | MTR_7g010650 | 41.667 | 144 | 83 | 1 | 36 | 179 | 37 | 179 | 1.55e-35 | 126 |
MS.gene004324.t1 | MTR_1g006490 | 39.336 | 211 | 118 | 7 | 35 | 238 | 18 | 225 | 1.15e-29 | 112 |
MS.gene004324.t1 | MTR_8g013680 | 33.193 | 238 | 148 | 6 | 28 | 254 | 9 | 246 | 1.11e-28 | 110 |
MS.gene004324.t1 | MTR_2g101370 | 33.469 | 245 | 151 | 6 | 19 | 254 | 6 | 247 | 6.10e-28 | 108 |
MS.gene004324.t1 | MTR_6g069040 | 32.510 | 243 | 153 | 6 | 19 | 251 | 2 | 243 | 1.25e-27 | 107 |
MS.gene004324.t1 | MTR_1g077540 | 32.231 | 242 | 155 | 4 | 19 | 251 | 2 | 243 | 1.73e-27 | 107 |
MS.gene004324.t1 | MTR_4g006650 | 45.517 | 145 | 63 | 3 | 37 | 178 | 5 | 136 | 1.54e-25 | 103 |
MS.gene004324.t1 | MTR_5g012810 | 35.242 | 227 | 136 | 6 | 22 | 238 | 3 | 228 | 2.26e-24 | 98.6 |
MS.gene004324.t1 | MTR_1g006590 | 33.906 | 233 | 145 | 6 | 35 | 261 | 18 | 247 | 2.87e-24 | 98.2 |
MS.gene004324.t1 | MTR_4g063090 | 33.632 | 223 | 139 | 5 | 41 | 255 | 26 | 247 | 1.32e-22 | 94.0 |
MS.gene004324.t1 | MTR_7g103030 | 31.878 | 229 | 145 | 5 | 13 | 234 | 1 | 225 | 3.72e-22 | 92.8 |
MS.gene004324.t1 | MTR_1g115405 | 32.911 | 237 | 145 | 6 | 35 | 261 | 20 | 252 | 5.24e-21 | 89.7 |
MS.gene004324.t1 | MTR_2g094270 | 29.778 | 225 | 134 | 5 | 34 | 235 | 38 | 261 | 1.62e-17 | 80.5 |
MS.gene004324.t1 | MTR_7g101190 | 29.218 | 243 | 151 | 5 | 14 | 235 | 17 | 259 | 1.86e-17 | 80.5 |
MS.gene004324.t1 | MTR_7g023350 | 33.175 | 211 | 128 | 5 | 35 | 235 | 20 | 227 | 3.59e-17 | 79.0 |
MS.gene004324.t1 | MTR_4g415300 | 32.075 | 212 | 129 | 6 | 39 | 235 | 59 | 270 | 5.21e-17 | 79.3 |
MS.gene004324.t1 | MTR_5g010150 | 31.925 | 213 | 129 | 5 | 39 | 235 | 55 | 267 | 5.35e-17 | 79.3 |
MS.gene004324.t1 | MTR_5g082070 | 31.944 | 216 | 125 | 6 | 39 | 235 | 58 | 270 | 5.93e-17 | 79.0 |
MS.gene004324.t1 | MTR_3g070210 | 32.243 | 214 | 127 | 7 | 39 | 235 | 58 | 270 | 8.24e-17 | 78.6 |
MS.gene004324.t1 | MTR_3g118010 | 29.680 | 219 | 139 | 4 | 34 | 237 | 35 | 253 | 1.27e-16 | 78.2 |
MS.gene004324.t1 | MTR_8g098375 | 31.776 | 214 | 128 | 7 | 39 | 235 | 55 | 267 | 6.35e-16 | 76.3 |
MS.gene004324.t1 | MTR_2g060360 | 31.100 | 209 | 136 | 4 | 35 | 236 | 18 | 225 | 2.25e-15 | 74.3 |
MS.gene004324.t1 | MTR_2g094270 | 28.708 | 209 | 128 | 4 | 34 | 222 | 38 | 245 | 2.86e-14 | 71.2 |
MS.gene004324.t1 | MTR_3g070210 | 31.658 | 199 | 121 | 6 | 39 | 223 | 58 | 255 | 5.80e-14 | 70.5 |
MS.gene004324.t1 | MTR_1g095070 | 28.571 | 182 | 114 | 4 | 78 | 245 | 24 | 203 | 4.11e-13 | 67.4 |
MS.gene004324.t1 | MTR_4g059390 | 27.354 | 223 | 141 | 5 | 34 | 235 | 37 | 259 | 4.45e-13 | 68.2 |
MS.gene004324.t1 | MTR_4g075590 | 25.112 | 223 | 139 | 7 | 39 | 236 | 40 | 259 | 2.09e-11 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene004324.t1 | AT4G18910 | 65.108 | 278 | 81 | 2 | 2 | 263 | 9 | 286 | 1.47e-127 | 364 |
MS.gene004324.t1 | AT4G19030 | 61.246 | 289 | 86 | 4 | 1 | 263 | 1 | 289 | 5.69e-122 | 350 |
MS.gene004324.t1 | AT5G37820 | 59.438 | 249 | 98 | 1 | 20 | 268 | 30 | 275 | 3.81e-101 | 296 |
MS.gene004324.t1 | AT5G37820 | 59.438 | 249 | 98 | 1 | 20 | 268 | 66 | 311 | 1.26e-100 | 296 |
MS.gene004324.t1 | AT5G37810 | 59.751 | 241 | 94 | 1 | 23 | 263 | 33 | 270 | 1.04e-99 | 293 |
MS.gene004324.t1 | AT1G31885 | 51.481 | 270 | 116 | 3 | 1 | 257 | 4 | 271 | 3.60e-94 | 280 |
MS.gene004324.t1 | AT4G18910 | 64.486 | 214 | 60 | 2 | 2 | 199 | 9 | 222 | 2.44e-89 | 265 |
MS.gene004324.t1 | AT1G31885 | 56.682 | 217 | 87 | 1 | 48 | 257 | 1 | 217 | 1.45e-86 | 259 |
MS.gene004324.t1 | AT4G19030 | 60.444 | 225 | 63 | 4 | 1 | 199 | 1 | 225 | 2.79e-86 | 257 |
MS.gene004324.t1 | AT2G34390 | 55.230 | 239 | 99 | 2 | 32 | 263 | 44 | 281 | 2.90e-85 | 256 |
MS.gene004324.t1 | AT2G34390 | 54.978 | 231 | 96 | 2 | 37 | 260 | 7 | 236 | 2.95e-83 | 250 |
MS.gene004324.t1 | AT4G19030 | 58.049 | 205 | 60 | 4 | 1 | 179 | 1 | 205 | 1.98e-74 | 226 |
MS.gene004324.t1 | AT1G80760 | 54.505 | 222 | 96 | 2 | 31 | 250 | 75 | 293 | 6.73e-72 | 223 |
MS.gene004324.t1 | AT4G10380 | 49.593 | 246 | 107 | 4 | 25 | 257 | 63 | 304 | 3.22e-69 | 216 |
MS.gene004324.t1 | AT2G34390 | 58.857 | 175 | 64 | 2 | 32 | 199 | 44 | 217 | 4.55e-64 | 200 |
MS.gene004324.t1 | AT2G34390 | 57.325 | 157 | 59 | 2 | 32 | 181 | 44 | 199 | 1.38e-55 | 179 |
MS.gene004324.t1 | AT3G06100 | 41.743 | 218 | 125 | 2 | 35 | 251 | 45 | 261 | 1.42e-47 | 160 |
MS.gene004324.t1 | AT3G06100 | 42.056 | 214 | 122 | 2 | 39 | 251 | 1 | 213 | 4.88e-47 | 157 |
MS.gene004324.t1 | AT1G31885 | 48.305 | 118 | 53 | 2 | 1 | 112 | 4 | 119 | 3.30e-32 | 115 |
MS.gene004324.t1 | AT3G16240 | 36.406 | 217 | 129 | 4 | 27 | 234 | 8 | 224 | 4.16e-31 | 116 |
MS.gene004324.t1 | AT2G29870 | 58.621 | 87 | 36 | 0 | 151 | 237 | 20 | 106 | 5.78e-30 | 110 |
MS.gene004324.t1 | AT5G47450 | 36.123 | 227 | 135 | 5 | 22 | 238 | 3 | 229 | 4.45e-29 | 111 |
MS.gene004324.t1 | AT1G17810 | 32.669 | 251 | 152 | 6 | 22 | 258 | 13 | 260 | 1.91e-25 | 102 |
MS.gene004324.t1 | AT4G17340 | 34.906 | 212 | 130 | 4 | 35 | 238 | 18 | 229 | 1.99e-25 | 101 |
MS.gene004324.t1 | AT3G06100 | 38.732 | 142 | 85 | 2 | 112 | 252 | 41 | 181 | 3.61e-25 | 99.4 |
MS.gene004324.t1 | AT1G73190 | 31.600 | 250 | 140 | 6 | 22 | 251 | 13 | 251 | 1.94e-24 | 99.4 |
MS.gene004324.t1 | AT2G36830 | 34.052 | 232 | 137 | 6 | 13 | 234 | 1 | 226 | 8.72e-24 | 97.1 |
MS.gene004324.t1 | AT3G26520 | 35.833 | 240 | 137 | 9 | 31 | 258 | 17 | 251 | 1.14e-23 | 96.7 |
MS.gene004324.t1 | AT2G25810 | 36.493 | 211 | 124 | 7 | 35 | 238 | 18 | 225 | 5.68e-23 | 94.7 |
MS.gene004324.t1 | AT4G01470 | 32.900 | 231 | 143 | 6 | 13 | 235 | 1 | 227 | 7.94e-21 | 89.4 |
MS.gene004324.t1 | AT4G35100 | 31.963 | 219 | 134 | 5 | 34 | 237 | 36 | 254 | 8.06e-19 | 84.3 |
MS.gene004324.t1 | AT4G35100 | 31.963 | 219 | 134 | 5 | 34 | 237 | 36 | 254 | 8.06e-19 | 84.3 |
MS.gene004324.t1 | AT2G16850 | 30.594 | 219 | 137 | 5 | 34 | 237 | 34 | 252 | 2.21e-18 | 82.8 |
MS.gene004324.t1 | AT5G60660 | 26.502 | 283 | 180 | 7 | 3 | 261 | 6 | 284 | 3.77e-18 | 82.4 |
MS.gene004324.t1 | AT3G54820 | 27.668 | 253 | 162 | 5 | 14 | 245 | 16 | 268 | 1.35e-17 | 80.9 |
MS.gene004324.t1 | AT3G47440 | 29.680 | 219 | 138 | 5 | 35 | 242 | 22 | 235 | 3.72e-17 | 79.3 |
MS.gene004324.t1 | AT2G39010 | 31.771 | 192 | 119 | 3 | 66 | 245 | 77 | 268 | 3.97e-17 | 79.7 |
MS.gene004324.t1 | AT3G61430 | 31.455 | 213 | 129 | 6 | 39 | 235 | 55 | 266 | 2.68e-16 | 77.4 |
MS.gene004324.t1 | AT3G61430 | 31.455 | 213 | 129 | 6 | 39 | 235 | 55 | 266 | 2.68e-16 | 77.4 |
MS.gene004324.t1 | AT1G01620 | 31.628 | 215 | 126 | 5 | 39 | 235 | 55 | 266 | 3.29e-16 | 77.0 |
MS.gene004324.t1 | AT4G00430 | 31.628 | 215 | 126 | 5 | 39 | 235 | 56 | 267 | 5.91e-16 | 76.3 |
MS.gene004324.t1 | AT3G53420 | 31.383 | 188 | 117 | 4 | 70 | 245 | 82 | 269 | 6.65e-16 | 76.3 |
MS.gene004324.t1 | AT3G53420 | 31.383 | 188 | 117 | 4 | 70 | 245 | 82 | 269 | 6.65e-16 | 76.3 |
MS.gene004324.t1 | AT1G01620 | 33.158 | 190 | 109 | 4 | 61 | 235 | 8 | 194 | 8.17e-16 | 74.7 |
MS.gene004324.t1 | AT2G37170 | 27.039 | 233 | 149 | 5 | 34 | 245 | 35 | 267 | 1.76e-15 | 75.1 |
MS.gene004324.t1 | AT4G23400 | 31.163 | 215 | 127 | 5 | 39 | 235 | 56 | 267 | 2.56e-15 | 74.7 |
MS.gene004324.t1 | AT2G37170 | 27.039 | 233 | 149 | 5 | 34 | 245 | 78 | 310 | 2.84e-15 | 74.7 |
MS.gene004324.t1 | AT2G45960 | 30.986 | 213 | 130 | 6 | 39 | 235 | 55 | 266 | 4.22e-15 | 73.9 |
MS.gene004324.t1 | AT2G37180 | 27.542 | 236 | 144 | 6 | 34 | 245 | 35 | 267 | 6.26e-14 | 70.5 |
MS.gene004324.t1 | AT2G45960 | 31.282 | 195 | 120 | 5 | 39 | 220 | 55 | 248 | 7.60e-13 | 67.4 |
MS.gene004324.t1 | AT2G45960 | 31.282 | 195 | 120 | 5 | 39 | 220 | 55 | 248 | 8.78e-13 | 67.4 |
Find 76 sgRNAs with CRISPR-Local
Find 168 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCTTGCCTCCTGAACCTTTA+AGG | 0.050929 | 2.3:+68620387 | None:intergenic |
TACCTTATGTTCGTCATTTC+TGG | 0.054064 | 2.3:-68621921 | MS.gene004324:CDS |
AAGAGTTCTTCATTCCTTAA+AGG | 0.183271 | 2.3:-68620401 | MS.gene004324:CDS |
TCCTGGAATTGCAATTGTTT+GGG | 0.271099 | 2.3:-68622703 | MS.gene004324:CDS |
TTCCTGGAATTGCAATTGTT+TGG | 0.289298 | 2.3:-68622704 | MS.gene004324:CDS |
ACATTCTTCTTGATATTTGC+TGG | 0.306945 | 2.3:-68622774 | MS.gene004324:CDS |
GGGACTTGTTGTTATGGTAT+TGG | 0.326696 | 2.3:-68622682 | MS.gene004324:CDS |
TCTTCATTCCTTAAAGGTTC+AGG | 0.328531 | 2.3:-68620395 | MS.gene004324:CDS |
GTCACCAATTCTAGGAGCTT+TGG | 0.344731 | 2.3:-68620483 | MS.gene004324:CDS |
GATAAAGTAGTGACACTTCC+TGG | 0.350687 | 2.3:-68622720 | MS.gene004324:CDS |
CCCCAAACAATTGCAATTCC+AGG | 0.359255 | 2.3:+68622702 | None:intergenic |
ATGCTAAATGTGTTGTTTGC+GGG | 0.360277 | 2.3:-68620750 | MS.gene004324:CDS |
ATTGCTTCAGATTGGTGAAT+TGG | 0.364133 | 2.3:-68620799 | MS.gene004324:intron |
TATATTGTGTCACCAATTCT+AGG | 0.367135 | 2.3:-68620491 | MS.gene004324:CDS |
TTGTAATTTACCTGCTTCAA+TGG | 0.368155 | 2.3:+68622582 | None:intergenic |
TCCATATTCCTCTATATTGA+TGG | 0.376585 | 2.3:+68620516 | None:intergenic |
TCACTACTTTATCATTGTTA+AGG | 0.387999 | 2.3:+68622730 | None:intergenic |
GGCAAGGAAAATCAATTTGC+AGG | 0.388137 | 2.3:-68622002 | MS.gene004324:CDS |
ATGAATCCAGCACGAAGCTT+AGG | 0.404724 | 2.3:-68620554 | MS.gene004324:CDS |
CCAGCCAAAGCTCCTAGAAT+TGG | 0.414721 | 2.3:+68620479 | None:intergenic |
CTGCTTCAATGGAAACCTTC+CGG | 0.415943 | 2.3:+68622593 | None:intergenic |
TGTTTGGGGACTTGTTGTTA+TGG | 0.418172 | 2.3:-68622688 | MS.gene004324:CDS |
TTCTTGATATTTGCTGGATG+TGG | 0.422703 | 2.3:-68622768 | MS.gene004324:CDS |
TATTCTGTTGGTCATATCTC+TGG | 0.429208 | 2.3:-68622657 | MS.gene004324:CDS |
ATTCGACCACAAAAGCTTGA+TGG | 0.429541 | 2.3:+68621958 | None:intergenic |
ACCATCAATATAGAGGAATA+TGG | 0.435935 | 2.3:-68620517 | MS.gene004324:CDS |
TAGGAGCTTTGGCTGGTACA+TGG | 0.439292 | 2.3:-68620472 | MS.gene004324:CDS |
AGGAACACTTCCAGCTGGTT+CGG | 0.440308 | 2.3:-68621982 | MS.gene004324:CDS |
TTTAAGGAATGAAGAACTCT+TGG | 0.440905 | 2.3:+68620403 | None:intergenic |
ATGGTATTGGTCTATTCTGT+TGG | 0.454467 | 2.3:-68622669 | MS.gene004324:CDS |
CTCCAGAAATGACGAACATA+AGG | 0.455985 | 2.3:+68621919 | None:intergenic |
AGGAGCTTTGGCTGGTACAT+GGG | 0.457036 | 2.3:-68620471 | MS.gene004324:CDS |
GGTAGATCCAACTGCAAGTC+CGG | 0.459639 | 2.3:+68620776 | None:intergenic |
TATATAATTGCTCAGGTCGC+TGG | 0.466822 | 2.3:-68622065 | MS.gene004324:CDS |
TGAATCCAGCACGAAGCTTA+GGG | 0.467560 | 2.3:-68620553 | MS.gene004324:CDS |
ATTCATTGATGCTCCTGTGA+TGG | 0.469127 | 2.3:+68620571 | None:intergenic |
TTCATTGATGCTCCTGTGAT+GGG | 0.472526 | 2.3:+68620572 | None:intergenic |
TATTGATGGTGCACAATAGC+TGG | 0.476206 | 2.3:+68620530 | None:intergenic |
ACCTGAGCAATTATATAAGC+TGG | 0.501786 | 2.3:+68622071 | None:intergenic |
CTTCAGATTGGTGAATTGGC+CGG | 0.503592 | 2.3:-68620795 | MS.gene004324:intron |
CGGAAGGTTTCCATTGAAGC+AGG | 0.504912 | 2.3:-68622592 | MS.gene004324:intron |
CCTGGAATTGCAATTGTTTG+GGG | 0.511430 | 2.3:-68622702 | MS.gene004324:CDS |
GCTTGATGGTCCGAACCAGC+TGG | 0.512331 | 2.3:+68621972 | None:intergenic |
AATATAGTTGGTAGCAGAAG+TGG | 0.514295 | 2.3:-68622802 | MS.gene004324:intron |
CATGCTAAATGTGTTGTTTG+CGG | 0.516473 | 2.3:-68620751 | MS.gene004324:CDS |
ACCAGCTTATATAATTGCTC+AGG | 0.519565 | 2.3:-68622072 | MS.gene004324:CDS |
CTCTTGGTGAGCTCACGTAC+TGG | 0.527633 | 2.3:+68620419 | None:intergenic |
GCTGGCCCTAAGCTTCGTGC+TGG | 0.529585 | 2.3:+68620548 | None:intergenic |
AAGAGGAACATGATCATCAA+TGG | 0.530972 | 2.3:+68622930 | None:intergenic |
CCTTAAAGGTTCAGGAGGCA+AGG | 0.537530 | 2.3:-68620387 | MS.gene004324:CDS |
CCAATTCTAGGAGCTTTGGC+TGG | 0.544250 | 2.3:-68620479 | MS.gene004324:CDS |
TTTGCAGGAACACTTCCAGC+TGG | 0.556257 | 2.3:-68621987 | MS.gene004324:CDS |
GTGTGAGCAATGGTGACAGC+GGG | 0.558512 | 2.3:+68622621 | None:intergenic |
AACATGGGTGATATTAGCAA+TGG | 0.558983 | 2.3:-68623012 | MS.gene004324:CDS |
ACCATTGCTCACACTACCAC+CGG | 0.562160 | 2.3:-68622612 | MS.gene004324:CDS |
CTGGCTTATTAGTGATTCTG+AGG | 0.564075 | 2.3:+68620438 | None:intergenic |
TGCTGGATGTGGTTCTGTGG+TGG | 0.564205 | 2.3:-68622757 | MS.gene004324:CDS |
ATAGTTGGTAGCAGAAGTGG+TGG | 0.567543 | 2.3:-68622799 | MS.gene004324:intron |
GAATTGGCCGGACTTGCAGT+TGG | 0.569862 | 2.3:-68620783 | MS.gene004324:CDS |
CTTAAAGGTTCAGGAGGCAA+GGG | 0.575536 | 2.3:-68620386 | MS.gene004324:CDS |
TGCTAAATGTGTTGTTTGCG+GGG | 0.584865 | 2.3:-68620749 | MS.gene004324:intron |
ATTTGCTGGATGTGGTTCTG+TGG | 0.593346 | 2.3:-68622760 | MS.gene004324:CDS |
TCATTCCTTAAAGGTTCAGG+AGG | 0.593782 | 2.3:-68620392 | MS.gene004324:CDS |
ATTGTGCACCATCAATATAG+AGG | 0.594483 | 2.3:-68620524 | MS.gene004324:CDS |
CAAACTCATATTCAGTGGCA+AGG | 0.615382 | 2.3:-68622018 | MS.gene004324:CDS |
ATATTTGACAGACCCATCAC+AGG | 0.629986 | 2.3:-68620584 | MS.gene004324:intron |
GATTACCGCTCTATTATCAG+TGG | 0.642782 | 2.3:+68621893 | None:intergenic |
TAGCAATGGAAATCTTGATG+TGG | 0.656350 | 2.3:-68622998 | MS.gene004324:CDS |
TTGCTCACACTACCACCGGA+AGG | 0.656735 | 2.3:-68622608 | MS.gene004324:CDS |
GCTCTCAAACTCATATTCAG+TGG | 0.657642 | 2.3:-68622023 | MS.gene004324:CDS |
AAACAACACATTTAGCATGA+CGG | 0.666187 | 2.3:+68620755 | None:intergenic |
TCCGGTGGTAGTGTGAGCAA+TGG | 0.668876 | 2.3:+68622611 | None:intergenic |
CTTCAATGGAAACCTTCCGG+TGG | 0.695539 | 2.3:+68622596 | None:intergenic |
TAGTTGGTAGCAGAAGTGGT+GGG | 0.737512 | 2.3:-68622798 | MS.gene004324:CDS |
AGTGTGAGCAATGGTGACAG+CGG | 0.739883 | 2.3:+68622620 | None:intergenic |
AGTTGCCACTGATAATAGAG+CGG | 0.742875 | 2.3:-68621898 | MS.gene004324:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAAAATTAATAATATTT+TGG | + | chr2.3:68621275-68621294 | None:intergenic | 0.0% |
!! | GTTATAAAAAAAAAATAGAA+TGG | + | chr2.3:68621867-68621886 | None:intergenic | 10.0% |
!!! | AAAAAATTAATTGTTGTTTA+TGG | - | chr2.3:68620506-68620525 | MS.gene004324:CDS | 10.0% |
!!! | TTTATTTAATTTTTTCTTGT+AGG | - | chr2.3:68621289-68621308 | MS.gene004324:intron | 10.0% |
!! | ATAGTTTATGTTGAAAAAAA+TGG | - | chr2.3:68622479-68622498 | MS.gene004324:intron | 15.0% |
!! | CCATTCTATAATTATTTAAA+GGG | - | chr2.3:68621718-68621737 | MS.gene004324:intron | 15.0% |
!! | CCTTTAAATAATTATAGAAT+GGG | + | chr2.3:68621720-68621739 | None:intergenic | 15.0% |
!! | GAAAAGATTAATTAATATGA+TGG | + | chr2.3:68621811-68621830 | None:intergenic | 15.0% |
!! | TTATGATATAATATTTGGTA+AGG | + | chr2.3:68622676-68622695 | None:intergenic | 15.0% |
!!! | AAGCTTATTTTTTTATCATT+AGG | - | chr2.3:68622269-68622288 | MS.gene004324:intron | 15.0% |
!!! | ACAACATTTTTTTTTAGATA+AGG | + | chr2.3:68622317-68622336 | None:intergenic | 15.0% |
!!! | CAACATTTTTTTTTAGATAA+GGG | + | chr2.3:68622316-68622335 | None:intergenic | 15.0% |
!!! | GCATTTTATGATATAATATT+TGG | + | chr2.3:68622681-68622700 | None:intergenic | 15.0% |
!!! | TGTTTTAGTATTGATTTTTT+GGG | - | chr2.3:68622047-68622066 | MS.gene004324:CDS | 15.0% |
!! | AACAAAAACTATTTAGACAA+AGG | + | chr2.3:68622552-68622571 | None:intergenic | 20.0% |
!! | ATCAAATTCTCTCAAAAAAA+GGG | + | chr2.3:68622186-68622205 | None:intergenic | 20.0% |
!! | ATGTTGTTGTATTTGATTAA+TGG | - | chr2.3:68622330-68622349 | MS.gene004324:intron | 20.0% |
!! | CCCATTCTATAATTATTTAA+AGG | - | chr2.3:68621717-68621736 | MS.gene004324:intron | 20.0% |
!! | CCCTTTAAATAATTATAGAA+TGG | + | chr2.3:68621721-68621740 | None:intergenic | 20.0% |
!! | TAAATTCTTAGAGTAATAGT+TGG | - | chr2.3:68621040-68621059 | MS.gene004324:intron | 20.0% |
!!! | ACTCTAAGAATTTATATAAG+AGG | + | chr2.3:68621034-68621053 | None:intergenic | 20.0% |
!!! | CTTTATAACAAAAATGCTTT+TGG | - | chr2.3:68621514-68621533 | MS.gene004324:intron | 20.0% |
!!! | GTGTTTTAGTATTGATTTTT+TGG | - | chr2.3:68622046-68622065 | MS.gene004324:CDS | 20.0% |
!!! | TTTTATTTATTGCTTCAGAT+TGG | - | chr2.3:68622578-68622597 | MS.gene004324:intron | 20.0% |
! | AAATACAACAACATAAGACA+TGG | + | chr2.3:68622119-68622138 | None:intergenic | 25.0% |
! | ATACAACAACATTGCTTATA+AGG | + | chr2.3:68622214-68622233 | None:intergenic | 25.0% |
! | ATGTCTTATGTTGTTGTATT+TGG | - | chr2.3:68622118-68622137 | MS.gene004324:intron | 25.0% |
! | CATCAAATTCTCTCAAAAAA+AGG | + | chr2.3:68622187-68622206 | None:intergenic | 25.0% |
! | CTTAAAAATACATTGTCATC+TGG | + | chr2.3:68621963-68621982 | None:intergenic | 25.0% |
! | TACAACAACATTGCTTATAA+GGG | + | chr2.3:68622213-68622232 | None:intergenic | 25.0% |
! | TACTTCTAATAACAAATGCA+AGG | + | chr2.3:68622364-68622383 | None:intergenic | 25.0% |
! | TACTTCTATTAACAAATGCA+AGG | + | chr2.3:68622024-68622043 | None:intergenic | 25.0% |
! | TCACTACTTTATCATTGTTA+AGG | + | chr2.3:68620658-68620677 | None:intergenic | 25.0% |
! | TCTCTCTTAAGTTATTTGAT+CGG | - | chr2.3:68620866-68620885 | MS.gene004324:intron | 25.0% |
!! | CAAATACAACATTGATCTTT+TGG | + | chr2.3:68622157-68622176 | None:intergenic | 25.0% |
!! | CATTGATTGTTGAATATAGT+TGG | - | chr2.3:68620571-68620590 | MS.gene004324:CDS | 25.0% |
!!! | AGCTAAGAGTTTAAAGTTTT+GGG | - | chr2.3:68620974-68620993 | MS.gene004324:intron | 25.0% |
!!! | TCATCTGGTTAAGTTATTTT+GGG | + | chr2.3:68621948-68621967 | None:intergenic | 25.0% |
AAACAACACATTTAGCATGA+CGG | + | chr2.3:68622633-68622652 | None:intergenic | 30.0% | |
AACTATTTCCTTCTTCACAT+AGG | + | chr2.3:68621228-68621247 | None:intergenic | 30.0% | |
AAGAGTTCTTCATTCCTTAA+AGG | - | chr2.3:68622984-68623003 | MS.gene004324:CDS | 30.0% | |
ACATTCTTCTTGATATTTGC+TGG | - | chr2.3:68620611-68620630 | MS.gene004324:intron | 30.0% | |
ACCATCAATATAGAGGAATA+TGG | - | chr2.3:68622868-68622887 | MS.gene004324:intron | 30.0% | |
TATATTGTGTCACCAATTCT+AGG | - | chr2.3:68622894-68622913 | MS.gene004324:intron | 30.0% | |
TATGTGAAGAAGGAAATAGT+TGG | - | chr2.3:68621227-68621246 | MS.gene004324:intron | 30.0% | |
TATTTCAACCACCTAAAATC+TGG | + | chr2.3:68620917-68620936 | None:intergenic | 30.0% | |
TCCATATTCCTCTATATTGA+TGG | + | chr2.3:68622872-68622891 | None:intergenic | 30.0% | |
TTAAGTTATTTGATCGGAGA+TGG | - | chr2.3:68620872-68620891 | MS.gene004324:intron | 30.0% | |
TTGTAATTTACCTGCTTCAA+TGG | + | chr2.3:68620806-68620825 | None:intergenic | 30.0% | |
TTTAAGGAATGAAGAACTCT+TGG | + | chr2.3:68622985-68623004 | None:intergenic | 30.0% | |
! | GTCATCTGGTTAAGTTATTT+TGG | + | chr2.3:68621949-68621968 | None:intergenic | 30.0% |
! | TTGTATTTGGCTCAGAAAAT+TGG | - | chr2.3:68622131-68622150 | MS.gene004324:intron | 30.0% |
!! | AATATTTTGGACTGCACAAA+CGG | + | chr2.3:68621262-68621281 | None:intergenic | 30.0% |
!! | GAGCTAAGAGTTTAAAGTTT+TGG | - | chr2.3:68620973-68620992 | MS.gene004324:intron | 30.0% |
!! | GCTAAGAGTTTAAAGTTTTG+GGG | - | chr2.3:68620975-68620994 | MS.gene004324:intron | 30.0% |
!! | GTTACATGTTTTTGTGAGAA+CGG | - | chr2.3:68622747-68622766 | MS.gene004324:CDS | 30.0% |
AAGAGGAACATGATCATCAA+TGG | + | chr2.3:68620458-68620477 | None:intergenic | 35.0% | |
AATACCTGCAAAAGACACAT+TGG | - | chr2.3:68620933-68620952 | MS.gene004324:intron | 35.0% | |
ACCAGCTTATATAATTGCTC+AGG | - | chr2.3:68621313-68621332 | MS.gene004324:intron | 35.0% | |
ACCTGAGCAATTATATAAGC+TGG | + | chr2.3:68621317-68621336 | None:intergenic | 35.0% | |
AGTAATAGTTGGAGAGTTGT+TGG | - | chr2.3:68621051-68621070 | MS.gene004324:intron | 35.0% | |
AGTTTCAACCTATGTGAAGA+AGG | - | chr2.3:68621217-68621236 | MS.gene004324:intron | 35.0% | |
ATAATTATAGAATGGGCCTC+AGG | + | chr2.3:68621713-68621732 | None:intergenic | 35.0% | |
ATTGCTTCAGATTGGTGAAT+TGG | - | chr2.3:68622586-68622605 | MS.gene004324:intron | 35.0% | |
ATTGTGCACCATCAATATAG+AGG | - | chr2.3:68622861-68622880 | MS.gene004324:intron | 35.0% | |
GCTCGATGTAGTAACAAAAT+GGG | - | chr2.3:68621168-68621187 | MS.gene004324:intron | 35.0% | |
TAACCTATGCAACATTGCAT+AGG | - | chr2.3:68621747-68621766 | MS.gene004324:intron | 35.0% | |
TAACCTATGCAACATTGCAT+AGG | + | chr2.3:68621766-68621747 | None:intergenic | 35.0% | |
TACCTTATGTTCGTCATTTC+TGG | - | chr2.3:68621464-68621483 | MS.gene004324:intron | 35.0% | |
TAGCAATGGAAATCTTGATG+TGG | - | chr2.3:68620387-68620406 | MS.gene004324:CDS | 35.0% | |
TATCCTATGCAATGTTGCAT+AGG | - | chr2.3:68622518-68622537 | MS.gene004324:intron | 35.0% | |
TATCCTATGCAATGTTGCAT+AGG | + | chr2.3:68622537-68622518 | None:intergenic | 35.0% | |
TATTCTGTTGGTCATATCTC+TGG | - | chr2.3:68620728-68620747 | MS.gene004324:intron | 35.0% | |
TCCTGGAATTGCAATTGTTT+GGG | - | chr2.3:68620682-68620701 | MS.gene004324:intron | 35.0% | |
TCTTCATTCCTTAAAGGTTC+AGG | - | chr2.3:68622990-68623009 | MS.gene004324:CDS | 35.0% | |
TGCTCGATGTAGTAACAAAA+TGG | - | chr2.3:68621167-68621186 | MS.gene004324:intron | 35.0% | |
TTCCTGGAATTGCAATTGTT+TGG | - | chr2.3:68620681-68620700 | MS.gene004324:intron | 35.0% | |
! | AAAGTCACCTTTTGCAAAAG+AGG | + | chr2.3:68620475-68620494 | None:intergenic | 35.0% |
! | AATAAAGGCACAATGTGAGA+AGG | + | chr2.3:68621106-68621125 | None:intergenic | 35.0% |
! | ACATAGGTTGAAACTTGCTT+TGG | + | chr2.3:68621212-68621231 | None:intergenic | 35.0% |
! | TCATGTTCCTCTTTTGCAAA+AGG | - | chr2.3:68620465-68620484 | MS.gene004324:CDS | 35.0% |
! | TTCTTGATATTTGCTGGATG+TGG | - | chr2.3:68620617-68620636 | MS.gene004324:intron | 35.0% |
!! | AATATAGTTGGTAGCAGAAG+TGG | - | chr2.3:68620583-68620602 | MS.gene004324:intron | 35.0% |
!! | ATGCTAAATGTGTTGTTTGC+GGG | - | chr2.3:68622635-68622654 | MS.gene004324:CDS | 35.0% |
!! | ATGGTATTGGTCTATTCTGT+TGG | - | chr2.3:68620716-68620735 | MS.gene004324:intron | 35.0% |
!! | CATGCTAAATGTGTTGTTTG+CGG | - | chr2.3:68622634-68622653 | MS.gene004324:CDS | 35.0% |
!! | TTTTGGGCTGTTGCTTATAA+GGG | - | chr2.3:68622063-68622082 | MS.gene004324:CDS | 35.0% |
!! | TTTTTGGGCTGTTGCTTATA+AGG | - | chr2.3:68622062-68622081 | MS.gene004324:CDS | 35.0% |
!!! | ATGACTAAGCGTTGATTTTC+TGG | + | chr2.3:68622248-68622267 | None:intergenic | 35.0% |
!!! | GGTTGTGTCATCACATTTTT+TGG | + | chr2.3:68620437-68620456 | None:intergenic | 35.0% |
!!! | TGACTAAGCGTTGATTTTCT+GGG | + | chr2.3:68622247-68622266 | None:intergenic | 35.0% |
AGTTGCCACTGATAATAGAG+CGG | - | chr2.3:68621487-68621506 | MS.gene004324:intron | 40.0% | |
ATATTTGACAGACCCATCAC+AGG | - | chr2.3:68622801-68622820 | MS.gene004324:intron | 40.0% | |
ATTCATTGATGCTCCTGTGA+TGG | + | chr2.3:68622817-68622836 | None:intergenic | 40.0% | |
ATTCGACCACAAAAGCTTGA+TGG | + | chr2.3:68621430-68621449 | None:intergenic | 40.0% | |
CAAACTCATATTCAGTGGCA+AGG | - | chr2.3:68621367-68621386 | MS.gene004324:intron | 40.0% | |
CCTGGAATTGCAATTGTTTG+GGG | - | chr2.3:68620683-68620702 | MS.gene004324:intron | 40.0% | |
CGATGTAGTAACAAAATGGG+TGG | - | chr2.3:68621171-68621190 | MS.gene004324:intron | 40.0% | |
CTCCAGAAATGACGAACATA+AGG | + | chr2.3:68621469-68621488 | None:intergenic | 40.0% | |
CTGGCTTATTAGTGATTCTG+AGG | + | chr2.3:68622950-68622969 | None:intergenic | 40.0% | |
GATAAAGTAGTGACACTTCC+TGG | - | chr2.3:68620665-68620684 | MS.gene004324:intron | 40.0% | |
GATTACCGCTCTATTATCAG+TGG | + | chr2.3:68621495-68621514 | None:intergenic | 40.0% | |
GCTCTCAAACTCATATTCAG+TGG | - | chr2.3:68621362-68621381 | MS.gene004324:intron | 40.0% | |
GGCAAGGAAAATCAATTTGC+AGG | - | chr2.3:68621383-68621402 | MS.gene004324:intron | 40.0% | |
TATATAATTGCTCAGGTCGC+TGG | - | chr2.3:68621320-68621339 | MS.gene004324:intron | 40.0% | |
TCAACCACCTAAAATCTGGT+CGG | + | chr2.3:68620913-68620932 | None:intergenic | 40.0% | |
TCATTCCTTAAAGGTTCAGG+AGG | - | chr2.3:68622993-68623012 | MS.gene004324:CDS | 40.0% | |
TTCATTGATGCTCCTGTGAT+GGG | + | chr2.3:68622816-68622835 | None:intergenic | 40.0% | |
! | CATTAGGAAGCGCAGAAAAT+TGG | - | chr2.3:68622285-68622304 | MS.gene004324:intron | 40.0% |
!! | GGGACTTGTTGTTATGGTAT+TGG | - | chr2.3:68620703-68620722 | MS.gene004324:intron | 40.0% |
!! | TATAAGGGCGTCATCAAAGA+AGG | - | chr2.3:68622078-68622097 | MS.gene004324:intron | 40.0% |
!! | TATTGATGGTGCACAATAGC+TGG | + | chr2.3:68622858-68622877 | None:intergenic | 40.0% |
!! | TGCTAAATGTGTTGTTTGCG+GGG | - | chr2.3:68622636-68622655 | MS.gene004324:CDS | 40.0% |
!! | TGTTTGGGGACTTGTTGTTA+TGG | - | chr2.3:68620697-68620716 | MS.gene004324:intron | 40.0% |
!! | TTAGCCTTAAATCAGTCCTG+AGG | - | chr2.3:68621694-68621713 | MS.gene004324:intron | 40.0% |
AATGGGTGGTGTGAAGAGTA+TGG | - | chr2.3:68621185-68621204 | MS.gene004324:intron | 45.0% | |
ATCGGAGATGGTCAGAAGAA+CGG | - | chr2.3:68620884-68620903 | MS.gene004324:intron | 45.0% | |
ATGAATCCAGCACGAAGCTT+AGG | - | chr2.3:68622831-68622850 | MS.gene004324:intron | 45.0% | |
CCCCAAACAATTGCAATTCC+AGG | + | chr2.3:68620686-68620705 | None:intergenic | 45.0% | |
CTGCTTCAATGGAAACCTTC+CGG | + | chr2.3:68620795-68620814 | None:intergenic | 45.0% | |
CTTAAAGGTTCAGGAGGCAA+GGG | - | chr2.3:68622999-68623018 | MS.gene004324:CDS | 45.0% | |
CTTCAGATTGGTGAATTGGC+CGG | - | chr2.3:68622590-68622609 | MS.gene004324:intron | 45.0% | |
GAAGAAGGAAATAGTTGGCG+AGG | - | chr2.3:68621232-68621251 | MS.gene004324:intron | 45.0% | |
GTTAGAAGAACGTACCTAGG+AGG | - | chr2.3:68620997-68621016 | MS.gene004324:intron | 45.0% | |
TGAATCCAGCACGAAGCTTA+GGG | - | chr2.3:68622832-68622851 | MS.gene004324:intron | 45.0% | |
TTGTGCCTTTATTGCATGCG+AGG | - | chr2.3:68621113-68621132 | MS.gene004324:intron | 45.0% | |
! | AACGCCAATGTGTCTTTTGC+AGG | + | chr2.3:68620940-68620959 | None:intergenic | 45.0% |
! | ATTTGCTGGATGTGGTTCTG+TGG | - | chr2.3:68620625-68620644 | MS.gene004324:intron | 45.0% |
! | GTCACCAATTCTAGGAGCTT+TGG | - | chr2.3:68622902-68622921 | MS.gene004324:intron | 45.0% |
! | TTCGGACCATCAAGCTTTTG+TGG | - | chr2.3:68621421-68621440 | MS.gene004324:intron | 45.0% |
!! | ATAGTTGGTAGCAGAAGTGG+TGG | - | chr2.3:68620586-68620605 | MS.gene004324:intron | 45.0% |
!! | TAGTTGGTAGCAGAAGTGGT+GGG | - | chr2.3:68620587-68620606 | MS.gene004324:intron | 45.0% |
!!! | GCGTTGATTTTCTGGGAGTA+AGG | + | chr2.3:68622240-68622259 | None:intergenic | 45.0% |
!! | TAAATAAAAATGTATAATAT+TGG | + | chr2.3:68622714-68622733 | None:intergenic | 5.0% |
!!! | ATTATACATTTTTATTTAAT+AGG | - | chr2.3:68622716-68622735 | MS.gene004324:CDS | 5.0% |
!!! | TTATACATTTTTATTTAATA+GGG | - | chr2.3:68622717-68622736 | MS.gene004324:CDS | 5.0% |
ACCATTGCTCACACTACCAC+CGG | - | chr2.3:68620773-68620792 | MS.gene004324:CDS | 50.0% | |
AGGAACACTTCCAGCTGGTT+CGG | - | chr2.3:68621403-68621422 | MS.gene004324:intron | 50.0% | |
AGTGTGAGCAATGGTGACAG+CGG | + | chr2.3:68620768-68620787 | None:intergenic | 50.0% | |
CCAGCCAAAGCTCCTAGAAT+TGG | + | chr2.3:68622909-68622928 | None:intergenic | 50.0% | |
CCTTAAAGGTTCAGGAGGCA+AGG | - | chr2.3:68622998-68623017 | MS.gene004324:CDS | 50.0% | |
CCTTGCCTCCTGAACCTTTA+AGG | + | chr2.3:68623001-68623020 | None:intergenic | 50.0% | |
CGGAAGGTTTCCATTGAAGC+AGG | - | chr2.3:68620793-68620812 | MS.gene004324:intron | 50.0% | |
CTTCAATGGAAACCTTCCGG+TGG | + | chr2.3:68620792-68620811 | None:intergenic | 50.0% | |
GGGGTTAGAAGAACGTACCT+AGG | - | chr2.3:68620994-68621013 | MS.gene004324:intron | 50.0% | |
GGTAGATCCAACTGCAAGTC+CGG | + | chr2.3:68622612-68622631 | None:intergenic | 50.0% | |
GTTGGAGAGTTGTTGGTCGA+CGG | - | chr2.3:68621058-68621077 | MS.gene004324:intron | 50.0% | |
TGCCTTTATTGCATGCGAGG+AGG | - | chr2.3:68621116-68621135 | MS.gene004324:intron | 50.0% | |
TGTTGGTCGACGGTTACAGA+TGG | - | chr2.3:68621068-68621087 | MS.gene004324:intron | 50.0% | |
TTTGCAGGAACACTTCCAGC+TGG | - | chr2.3:68621398-68621417 | MS.gene004324:intron | 50.0% | |
! | ACGGTGTCCGACCAGATTTT+AGG | - | chr2.3:68620903-68620922 | MS.gene004324:intron | 50.0% |
! | AGGACTTTTCGTGTCCTCCT+AGG | + | chr2.3:68621014-68621033 | None:intergenic | 50.0% |
! | AGGAGCTTTGGCTGGTACAT+GGG | - | chr2.3:68622914-68622933 | MS.gene004324:intron | 50.0% |
! | CCAATTCTAGGAGCTTTGGC+TGG | - | chr2.3:68622906-68622925 | MS.gene004324:intron | 50.0% |
! | GTGTCCGACCAGATTTTAGG+TGG | - | chr2.3:68620906-68620925 | MS.gene004324:intron | 50.0% |
! | TAGGAGCTTTGGCTGGTACA+TGG | - | chr2.3:68622913-68622932 | MS.gene004324:intron | 50.0% |
! | TGGGCCTCAGGACTGATTTA+AGG | + | chr2.3:68621701-68621720 | None:intergenic | 50.0% |
CGCCTCCTCGCATGCAATAA+AGG | + | chr2.3:68621121-68621140 | None:intergenic | 55.0% | |
CTCTTGGTGAGCTCACGTAC+TGG | + | chr2.3:68622969-68622988 | None:intergenic | 55.0% | |
GAATTGGCCGGACTTGCAGT+TGG | - | chr2.3:68622602-68622621 | MS.gene004324:CDS | 55.0% | |
GTGTGAGCAATGGTGACAGC+GGG | + | chr2.3:68620767-68620786 | None:intergenic | 55.0% | |
TGGTCGACGGTTACAGATGG+CGG | - | chr2.3:68621071-68621090 | MS.gene004324:intron | 55.0% | |
TTGCTCACACTACCACCGGA+AGG | - | chr2.3:68620777-68620796 | MS.gene004324:CDS | 55.0% | |
! | TCCGGTGGTAGTGTGAGCAA+TGG | + | chr2.3:68620777-68620796 | None:intergenic | 55.0% |
! | TGCTGGATGTGGTTCTGTGG+TGG | - | chr2.3:68620628-68620647 | MS.gene004324:intron | 55.0% |
!! | CGAGGAGGCGTTACAGACTT+AGG | - | chr2.3:68621131-68621150 | MS.gene004324:intron | 55.0% |
! | GCTTGATGGTCCGAACCAGC+TGG | + | chr2.3:68621416-68621435 | None:intergenic | 60.0% |
GCTGGCCCTAAGCTTCGTGC+TGG | + | chr2.3:68622840-68622859 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 68620376 | 68623031 | 68620376 | ID=MS.gene004324 |
chr2.3 | mRNA | 68620376 | 68623031 | 68620376 | ID=MS.gene004324.t1;Parent=MS.gene004324 |
chr2.3 | exon | 68622921 | 68623031 | 68622921 | ID=MS.gene004324.t1.exon1;Parent=MS.gene004324.t1 |
chr2.3 | CDS | 68622921 | 68623031 | 68622921 | ID=cds.MS.gene004324.t1;Parent=MS.gene004324.t1 |
chr2.3 | exon | 68622593 | 68622817 | 68622593 | ID=MS.gene004324.t1.exon2;Parent=MS.gene004324.t1 |
chr2.3 | CDS | 68622593 | 68622817 | 68622593 | ID=cds.MS.gene004324.t1;Parent=MS.gene004324.t1 |
chr2.3 | exon | 68621899 | 68622096 | 68621899 | ID=MS.gene004324.t1.exon3;Parent=MS.gene004324.t1 |
chr2.3 | CDS | 68621899 | 68622096 | 68621899 | ID=cds.MS.gene004324.t1;Parent=MS.gene004324.t1 |
chr2.3 | exon | 68620750 | 68620811 | 68620750 | ID=MS.gene004324.t1.exon4;Parent=MS.gene004324.t1 |
chr2.3 | CDS | 68620750 | 68620811 | 68620750 | ID=cds.MS.gene004324.t1;Parent=MS.gene004324.t1 |
chr2.3 | exon | 68620376 | 68620595 | 68620376 | ID=MS.gene004324.t1.exon5;Parent=MS.gene004324.t1 |
chr2.3 | CDS | 68620376 | 68620595 | 68620376 | ID=cds.MS.gene004324.t1;Parent=MS.gene004324.t1 |
Gene Sequence |
Protein sequence |