Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64417.t1 | XP_003617145.1 | 60.4 | 149 | 45 | 2 | 99 | 247 | 278 | 412 | 9.60E-33 | 150.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64417.t1 | Q6X4A2 | 50.7 | 146 | 58 | 2 | 102 | 247 | 288 | 419 | 1.9e-29 | 131.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64417.t1 | G7K7Q8 | 60.4 | 149 | 45 | 2 | 99 | 247 | 278 | 412 | 6.9e-33 | 150.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene64417 | 0.805506 | 1.29E-49 | -1.69E-46 |
| MS.gene049151 | MS.gene64417 | 0.808663 | 2.77E-50 | -1.69E-46 |
| MS.gene049159 | MS.gene64417 | 0.894157 | 3.21E-75 | -1.69E-46 |
| MS.gene049382 | MS.gene64417 | 0.826899 | 2.11E-54 | -1.69E-46 |
| MS.gene049435 | MS.gene64417 | 0.834784 | 2.45E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene64417 | 0.807088 | 6.00E-50 | -1.69E-46 |
| MS.gene049501 | MS.gene64417 | 0.826032 | 3.39E-54 | -1.69E-46 |
| MS.gene049801 | MS.gene64417 | 0.801291 | 9.65E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene64417 | 0.807266 | 5.50E-50 | -1.69E-46 |
| MS.gene050103 | MS.gene64417 | 0.806758 | 7.04E-50 | -1.69E-46 |
| MS.gene050226 | MS.gene64417 | 0.808342 | 3.25E-50 | -1.69E-46 |
| MS.gene050228 | MS.gene64417 | 0.805453 | 1.33E-49 | -1.69E-46 |
| MS.gene050237 | MS.gene64417 | 0.807812 | 4.21E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene64417 | 0.831092 | 2.03E-55 | -1.69E-46 |
| MS.gene050605 | MS.gene64417 | 0.833325 | 5.69E-56 | -1.69E-46 |
| MS.gene050623 | MS.gene64417 | -0.818432 | 1.97E-52 | -1.69E-46 |
| MS.gene050680 | MS.gene64417 | 0.803878 | 2.83E-49 | -1.69E-46 |
| MS.gene050689 | MS.gene64417 | 0.822385 | 2.44E-53 | -1.69E-46 |
| MS.gene050721 | MS.gene64417 | 0.805725 | 1.16E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene64417 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene050759 | MS.gene64417 | 0.827417 | 1.58E-54 | -1.69E-46 |
| MS.gene050762 | MS.gene64417 | 0.815654 | 8.28E-52 | -1.69E-46 |
| MS.gene050763 | MS.gene64417 | 0.817431 | 3.31E-52 | -1.69E-46 |
| MS.gene050807 | MS.gene64417 | 0.833577 | 4.92E-56 | -1.69E-46 |
| MS.gene050815 | MS.gene64417 | 0.858996 | 5.61E-63 | -1.69E-46 |
| MS.gene050826 | MS.gene64417 | 0.811176 | 7.98E-51 | -1.69E-46 |
| MS.gene050844 | MS.gene64417 | 0.802552 | 5.31E-49 | -1.69E-46 |
| MS.gene050941 | MS.gene64417 | 0.824269 | 8.85E-54 | -1.69E-46 |
| MS.gene050953 | MS.gene64417 | 0.802741 | 4.86E-49 | -1.69E-46 |
| MS.gene050962 | MS.gene64417 | 0.815101 | 1.10E-51 | -1.69E-46 |
| MS.gene051180 | MS.gene64417 | 0.823218 | 1.56E-53 | -1.69E-46 |
| MS.gene051198 | MS.gene64417 | 0.84374 | 1.16E-58 | -1.69E-46 |
| MS.gene051210 | MS.gene64417 | 0.810093 | 1.37E-50 | -1.69E-46 |
| MS.gene051243 | MS.gene64417 | 0.841734 | 3.97E-58 | -1.69E-46 |
| MS.gene051245 | MS.gene64417 | 0.804764 | 1.85E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene64417 | 0.838031 | 3.66E-57 | -1.69E-46 |
| MS.gene051344 | MS.gene64417 | 0.815238 | 1.02E-51 | -1.69E-46 |
| MS.gene051452 | MS.gene64417 | 0.830839 | 2.34E-55 | -1.69E-46 |
| MS.gene051535 | MS.gene64417 | 0.827868 | 1.23E-54 | -1.69E-46 |
| MS.gene051577 | MS.gene64417 | 0.816995 | 4.15E-52 | -1.69E-46 |
| MS.gene051800 | MS.gene64417 | 0.81073 | 9.97E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene64417 | 0.828051 | 1.11E-54 | -1.69E-46 |
| MS.gene052020 | MS.gene64417 | 0.814017 | 1.91E-51 | -1.69E-46 |
| MS.gene05215 | MS.gene64417 | 0.81631 | 5.91E-52 | -1.69E-46 |
| MS.gene052323 | MS.gene64417 | 0.819235 | 1.29E-52 | -1.69E-46 |
| MS.gene052384 | MS.gene64417 | 0.800305 | 1.53E-48 | -1.69E-46 |
| MS.gene052426 | MS.gene64417 | 0.87345 | 1.46E-67 | -1.69E-46 |
| MS.gene052516 | MS.gene64417 | 0.807615 | 4.64E-50 | -1.69E-46 |
| MS.gene052611 | MS.gene64417 | 0.818271 | 2.14E-52 | -1.69E-46 |
| MS.gene052665 | MS.gene64417 | 0.81664 | 4.98E-52 | -1.69E-46 |
| MS.gene052860 | MS.gene64417 | 0.806741 | 7.10E-50 | -1.69E-46 |
| MS.gene052863 | MS.gene64417 | 0.863021 | 3.35E-64 | -1.69E-46 |
| MS.gene05288 | MS.gene64417 | 0.835917 | 1.27E-56 | -1.69E-46 |
| MS.gene052896 | MS.gene64417 | 0.846632 | 1.92E-59 | -1.69E-46 |
| MS.gene05289 | MS.gene64417 | 0.828266 | 9.89E-55 | -1.69E-46 |
| MS.gene053008 | MS.gene64417 | 0.886002 | 4.99E-72 | -1.69E-46 |
| MS.gene053074 | MS.gene64417 | 0.810026 | 1.41E-50 | -1.69E-46 |
| MS.gene054236 | MS.gene64417 | 0.818842 | 1.59E-52 | -1.69E-46 |
| MS.gene054379 | MS.gene64417 | 0.823329 | 1.47E-53 | -1.69E-46 |
| MS.gene054472 | MS.gene64417 | 0.865162 | 7.21E-65 | -1.69E-46 |
| MS.gene054651 | MS.gene64417 | 0.804385 | 2.22E-49 | -1.69E-46 |
| MS.gene054657 | MS.gene64417 | 0.833846 | 4.22E-56 | -1.69E-46 |
| MS.gene054658 | MS.gene64417 | 0.832351 | 9.94E-56 | -1.69E-46 |
| MS.gene054823 | MS.gene64417 | 0.833481 | 5.20E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene64417 | 0.808579 | 2.89E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene64417 | 0.862289 | 5.63E-64 | -1.69E-46 |
| MS.gene05517 | MS.gene64417 | 0.825865 | 3.71E-54 | -1.69E-46 |
| MS.gene055222 | MS.gene64417 | 0.824105 | 9.66E-54 | -1.69E-46 |
| MS.gene055227 | MS.gene64417 | 0.803944 | 2.74E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene64417 | 0.830242 | 3.28E-55 | -1.69E-46 |
| MS.gene055512 | MS.gene64417 | 0.806924 | 6.50E-50 | -1.69E-46 |
| MS.gene055608 | MS.gene64417 | 0.824628 | 7.28E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene64417 | 0.8352 | 1.93E-56 | -1.69E-46 |
| MS.gene055701 | MS.gene64417 | 0.827661 | 1.38E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene64417 | 0.840234 | 9.83E-58 | -1.69E-46 |
| MS.gene055926 | MS.gene64417 | 0.834482 | 2.92E-56 | -1.69E-46 |
| MS.gene056173 | MS.gene64417 | 0.805763 | 1.14E-49 | -1.69E-46 |
| MS.gene056480 | MS.gene64417 | 0.80176 | 7.73E-49 | -1.69E-46 |
| MS.gene056552 | MS.gene64417 | 0.80116 | 1.03E-48 | -1.69E-46 |
| MS.gene056760 | MS.gene64417 | 0.833572 | 4.94E-56 | -1.69E-46 |
| MS.gene056873 | MS.gene64417 | 0.817832 | 2.69E-52 | -1.69E-46 |
| MS.gene057140 | MS.gene64417 | 0.836451 | 9.29E-57 | -1.69E-46 |
| MS.gene05761 | MS.gene64417 | 0.811409 | 7.10E-51 | -1.69E-46 |
| MS.gene057693 | MS.gene64417 | 0.825353 | 4.91E-54 | -1.69E-46 |
| MS.gene057750 | MS.gene64417 | 0.815445 | 9.21E-52 | -1.69E-46 |
| MS.gene057754 | MS.gene64417 | 0.802133 | 6.48E-49 | -1.69E-46 |
| MS.gene057855 | MS.gene64417 | 0.814253 | 1.69E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene64417 | 0.856918 | 2.32E-62 | -1.69E-46 |
| MS.gene058009 | MS.gene64417 | 0.810106 | 1.36E-50 | -1.69E-46 |
| MS.gene058010 | MS.gene64417 | 0.84013 | 1.05E-57 | -1.69E-46 |
| MS.gene058146 | MS.gene64417 | 0.855185 | 7.48E-62 | -1.69E-46 |
| MS.gene058399 | MS.gene64417 | 0.833116 | 6.42E-56 | -1.69E-46 |
| MS.gene058548 | MS.gene64417 | 0.821976 | 3.03E-53 | -1.69E-46 |
| MS.gene058549 | MS.gene64417 | 0.801803 | 7.58E-49 | -1.69E-46 |
| MS.gene058595 | MS.gene64417 | 0.86176 | 8.18E-64 | -1.69E-46 |
| MS.gene058646 | MS.gene64417 | 0.838248 | 3.22E-57 | -1.69E-46 |
| MS.gene058906 | MS.gene64417 | 0.800691 | 1.28E-48 | -1.69E-46 |
| MS.gene058979 | MS.gene64417 | 0.825825 | 3.79E-54 | -1.69E-46 |
| MS.gene059128 | MS.gene64417 | 0.825537 | 4.44E-54 | -1.69E-46 |
| MS.gene059161 | MS.gene64417 | 0.814476 | 1.51E-51 | -1.69E-46 |
| MS.gene059249 | MS.gene64417 | 0.808804 | 2.59E-50 | -1.69E-46 |
| MS.gene059283 | MS.gene64417 | 0.834652 | 2.65E-56 | -1.69E-46 |
| MS.gene059713 | MS.gene64417 | 0.80121 | 1.00E-48 | -1.69E-46 |
| MS.gene059725 | MS.gene64417 | 0.813442 | 2.55E-51 | -1.69E-46 |
| MS.gene05978 | MS.gene64417 | 0.80617 | 9.37E-50 | -1.69E-46 |
| MS.gene05979 | MS.gene64417 | 0.827243 | 1.74E-54 | -1.69E-46 |
| MS.gene059842 | MS.gene64417 | 0.877426 | 6.35E-69 | -1.69E-46 |
| MS.gene059937 | MS.gene64417 | 0.824167 | 9.35E-54 | -1.69E-46 |
| MS.gene060011 | MS.gene64417 | 0.845623 | 3.62E-59 | -1.69E-46 |
| MS.gene060084 | MS.gene64417 | 0.803501 | 3.38E-49 | -1.69E-46 |
| MS.gene060137 | MS.gene64417 | -0.808744 | 2.67E-50 | -1.69E-46 |
| MS.gene060296 | MS.gene64417 | 0.817127 | 3.87E-52 | -1.69E-46 |
| MS.gene060310 | MS.gene64417 | 0.831323 | 1.78E-55 | -1.69E-46 |
| MS.gene060322 | MS.gene64417 | 0.851296 | 9.74E-61 | -1.69E-46 |
| MS.gene060480 | MS.gene64417 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene06052 | MS.gene64417 | 0.831778 | 1.38E-55 | -1.69E-46 |
| MS.gene060637 | MS.gene64417 | 0.806979 | 6.32E-50 | -1.69E-46 |
| MS.gene060677 | MS.gene64417 | 0.808665 | 2.77E-50 | -1.69E-46 |
| MS.gene060683 | MS.gene64417 | 0.878561 | 2.54E-69 | -1.69E-46 |
| MS.gene060685 | MS.gene64417 | 0.87521 | 3.69E-68 | -1.69E-46 |
| MS.gene060802 | MS.gene64417 | 0.877041 | 8.63E-69 | -1.69E-46 |
| MS.gene060803 | MS.gene64417 | 0.880634 | 4.67E-70 | -1.69E-46 |
| MS.gene060998 | MS.gene64417 | 0.869335 | 3.34E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64417.t1 | MTR_5g088350 | 85.870 | 92 | 13 | 0 | 156 | 247 | 321 | 412 | 1.41e-44 | 155 |
| MS.gene64417.t1 | MTR_5g088350 | 89.189 | 74 | 8 | 0 | 156 | 229 | 321 | 394 | 1.67e-35 | 131 |
| MS.gene64417.t1 | MTR_2g019575 | 63.736 | 91 | 32 | 1 | 158 | 247 | 207 | 297 | 1.09e-28 | 110 |
| MS.gene64417.t1 | MTR_8g024600 | 63.736 | 91 | 32 | 1 | 158 | 247 | 241 | 331 | 1.79e-28 | 110 |
| MS.gene64417.t1 | MTR_8g024600 | 63.736 | 91 | 32 | 1 | 158 | 247 | 324 | 414 | 4.75e-28 | 111 |
| MS.gene64417.t1 | MTR_8g024590 | 64.835 | 91 | 31 | 1 | 158 | 247 | 323 | 413 | 5.69e-28 | 110 |
| MS.gene64417.t1 | MTR_7g034575 | 63.043 | 92 | 26 | 1 | 1 | 92 | 287 | 370 | 2.26e-26 | 107 |
| MS.gene64417.t1 | MTR_2g049790 | 42.361 | 144 | 73 | 4 | 105 | 247 | 293 | 427 | 2.38e-23 | 98.2 |
| MS.gene64417.t1 | MTR_2g019575 | 63.380 | 71 | 25 | 1 | 158 | 227 | 207 | 277 | 1.09e-19 | 86.3 |
| MS.gene64417.t1 | MTR_4g114670 | 41.935 | 93 | 53 | 1 | 156 | 247 | 307 | 399 | 2.20e-14 | 72.4 |
| MS.gene64417.t1 | MTR_4g114670 | 41.935 | 93 | 53 | 1 | 156 | 247 | 320 | 412 | 2.50e-14 | 72.4 |
| MS.gene64417.t1 | MTR_4g029020 | 34.375 | 128 | 76 | 2 | 121 | 247 | 292 | 412 | 2.97e-14 | 72.0 |
| MS.gene64417.t1 | MTR_7g072575 | 38.318 | 107 | 57 | 3 | 135 | 240 | 312 | 410 | 1.82e-12 | 66.6 |
| MS.gene64417.t1 | MTR_5g067150 | 34.483 | 87 | 56 | 1 | 156 | 241 | 318 | 404 | 2.66e-11 | 63.2 |
| MS.gene64417.t1 | MTR_5g075060 | 39.785 | 93 | 52 | 3 | 157 | 247 | 345 | 435 | 3.81e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64417.t1 | AT2G26980 | 71.739 | 92 | 26 | 0 | 156 | 247 | 322 | 413 | 1.21e-34 | 129 |
| MS.gene64417.t1 | AT2G26980 | 71.739 | 92 | 26 | 0 | 156 | 247 | 332 | 423 | 1.35e-34 | 129 |
| MS.gene64417.t1 | AT5G21326 | 59.783 | 92 | 37 | 0 | 156 | 247 | 321 | 412 | 2.24e-30 | 117 |
| MS.gene64417.t1 | AT2G26980 | 77.465 | 71 | 16 | 0 | 156 | 226 | 322 | 392 | 4.34e-26 | 105 |
| MS.gene64417.t1 | AT1G30270 | 56.989 | 93 | 39 | 1 | 156 | 247 | 246 | 338 | 5.56e-25 | 102 |
| MS.gene64417.t1 | AT1G30270 | 56.989 | 93 | 39 | 1 | 156 | 247 | 343 | 435 | 1.15e-24 | 102 |
| MS.gene64417.t1 | AT1G30270 | 56.989 | 93 | 39 | 1 | 156 | 247 | 343 | 435 | 1.36e-24 | 102 |
| MS.gene64417.t1 | AT1G01140 | 56.044 | 91 | 39 | 1 | 158 | 247 | 329 | 419 | 1.60e-22 | 95.9 |
| MS.gene64417.t1 | AT1G01140 | 56.044 | 91 | 39 | 1 | 158 | 247 | 329 | 419 | 1.86e-22 | 95.9 |
| MS.gene64417.t1 | AT1G01140 | 56.044 | 91 | 39 | 1 | 158 | 247 | 331 | 421 | 1.88e-22 | 95.9 |
| MS.gene64417.t1 | AT5G35410 | 35.616 | 146 | 80 | 3 | 104 | 247 | 279 | 412 | 3.11e-16 | 77.8 |
| MS.gene64417.t1 | AT2G26980 | 75.000 | 52 | 13 | 0 | 156 | 207 | 322 | 373 | 6.24e-16 | 76.6 |
| MS.gene64417.t1 | AT5G58380 | 42.391 | 92 | 50 | 2 | 157 | 247 | 338 | 427 | 7.18e-14 | 70.9 |
| MS.gene64417.t1 | AT5G07070 | 33.065 | 124 | 75 | 3 | 126 | 247 | 298 | 415 | 2.05e-13 | 69.7 |
| MS.gene64417.t1 | AT1G29230 | 37.864 | 103 | 55 | 2 | 138 | 240 | 386 | 479 | 7.60e-13 | 68.2 |
| MS.gene64417.t1 | AT4G24400 | 30.000 | 120 | 79 | 2 | 121 | 239 | 286 | 401 | 9.68e-12 | 64.7 |
| MS.gene64417.t1 | AT3G17510 | 41.379 | 87 | 49 | 1 | 158 | 242 | 250 | 336 | 1.43e-11 | 63.9 |
| MS.gene64417.t1 | AT3G17510 | 41.379 | 87 | 49 | 1 | 158 | 242 | 330 | 416 | 1.72e-11 | 63.9 |
| MS.gene64417.t1 | AT4G30960 | 38.710 | 93 | 55 | 2 | 157 | 247 | 326 | 418 | 5.62e-11 | 62.4 |
Find 46 sgRNAs with CRISPR-Local
Find 188 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAAGCTGCTAAACTTCT+TGG | 0.201062 | 2.1:+49336771 | MS.gene64417:CDS |
| TTGCTCCGATTCTAATTATT+TGG | 0.237224 | 2.1:+49334802 | MS.gene64417:CDS |
| ATGTAGAACAGGGATTTAAA+AGG | 0.261117 | 2.1:+49336697 | MS.gene64417:CDS |
| CTACTGAGTATTGGAATCTT+TGG | 0.284659 | 2.1:+49335410 | MS.gene64417:CDS |
| CGATTCTAATTATTTGGCTT+TGG | 0.294603 | 2.1:+49334808 | MS.gene64417:CDS |
| ATACCTCTGTGGCAACATTA+AGG | 0.295742 | 2.1:-49336860 | None:intergenic |
| AGTGGCACCTTCTCTTCATA+TGG | 0.374141 | 2.1:+49336887 | MS.gene64417:CDS |
| ATTAAACGAAGCACCTTGTA+AGG | 0.387760 | 2.1:-49334866 | None:intergenic |
| CAAACACTAACAACCTCTTT+AGG | 0.392615 | 2.1:-49334782 | None:intergenic |
| TACTGAGTATTGGAATCTTT+GGG | 0.392757 | 2.1:+49335411 | MS.gene64417:CDS |
| TTCTAATTATTTGGCTTTGG+AGG | 0.397619 | 2.1:+49334811 | MS.gene64417:CDS |
| TTGTAAGGGCCTGGAGCATC+AGG | 0.397907 | 2.1:-49334851 | None:intergenic |
| AGTCCTCTCAACTAGATGAT+TGG | 0.411617 | 2.1:-49334747 | None:intergenic |
| TGTAGAACAGGGATTTAAAA+GGG | 0.420377 | 2.1:+49336698 | MS.gene64417:CDS |
| TTGCAAATTTGAAAGATGTA+AGG | 0.439850 | 2.1:+49336829 | MS.gene64417:CDS |
| GTCATTTGAATTCGAGGAAG+TGG | 0.442937 | 2.1:+49335543 | MS.gene64417:CDS |
| GTTGATTTCCTTTCTAGTGA+TGG | 0.455177 | 2.1:+49335625 | MS.gene64417:CDS |
| ACTAGATGATTGGCTCTGAC+AGG | 0.455910 | 2.1:-49334737 | None:intergenic |
| CGAAGCACCTTGTAAGGGCC+TGG | 0.468911 | 2.1:-49334860 | None:intergenic |
| GTTGTGAATGAATGTTTCTT+CGG | 0.474716 | 2.1:-49335481 | None:intergenic |
| TTACCAGTCATTTGAATTCG+AGG | 0.484197 | 2.1:+49335537 | MS.gene64417:CDS |
| CAAAGCCAAATAATTAGAAT+CGG | 0.488828 | 2.1:-49334807 | None:intergenic |
| TTGTTGATTATCTCGTCTGC+AGG | 0.492149 | 2.1:-49336744 | None:intergenic |
| ATAGGAGTGCTACTGAGTAT+TGG | 0.499221 | 2.1:+49335401 | MS.gene64417:intron |
| TAAATCACATATACCTAAAG+AGG | 0.504395 | 2.1:+49334769 | MS.gene64417:CDS |
| CTAGTGATGGAGTGGCCATC+CGG | 0.505833 | 2.1:+49335638 | MS.gene64417:CDS |
| TGATGCTCCAGGCCCTTACA+AGG | 0.532014 | 2.1:+49334853 | MS.gene64417:CDS |
| TGGCCACTCCATCACTAGAA+AGG | 0.540146 | 2.1:-49335633 | None:intergenic |
| AACTTAATTAACGAAACTGC+AGG | 0.540822 | 2.1:-49335595 | None:intergenic |
| ATCAATGAACAAAGTAGAGA+AGG | 0.543411 | 2.1:+49334887 | MS.gene64417:CDS |
| CTTCCTCGAATTCAAATGAC+TGG | 0.544333 | 2.1:-49335540 | None:intergenic |
| AATTCACAACCTGATGCTCC+AGG | 0.546678 | 2.1:+49334842 | MS.gene64417:CDS |
| TTTCCTTTCTAGTGATGGAG+TGG | 0.551252 | 2.1:+49335630 | MS.gene64417:CDS |
| AGAATGCCACACAAAACTGT+TGG | 0.554324 | 2.1:+49337087 | MS.gene64417:CDS |
| CTAGATGATTGGCTCTGACA+GGG | 0.591693 | 2.1:-49334736 | None:intergenic |
| TTTGAATTCGAGGAAGTGGA+AGG | 0.599775 | 2.1:+49335547 | MS.gene64417:CDS |
| ACTTCAACCATATGAAGAGA+AGG | 0.599789 | 2.1:-49336894 | None:intergenic |
| CACATGTGAAGCTGAAAACA+AGG | 0.602428 | 2.1:+49334912 | MS.gene64417:CDS |
| TTAAACGAAGCACCTTGTAA+GGG | 0.617327 | 2.1:-49334865 | None:intergenic |
| TGCCACAGAGGTATTTCAAG+TGG | 0.617772 | 2.1:+49336869 | MS.gene64417:CDS |
| AGGGATTTAAAAGGGAAACA+AGG | 0.622932 | 2.1:+49336706 | MS.gene64417:CDS |
| AATTTGAAAGATGTAAGGAA+AGG | 0.635759 | 2.1:+49336834 | MS.gene64417:CDS |
| GAGCCAATCATCTAGTTGAG+AGG | 0.636474 | 2.1:+49334744 | MS.gene64417:CDS |
| AAACCTTAATGTTGCCACAG+AGG | 0.668073 | 2.1:+49336857 | MS.gene64417:CDS |
| ACTAGAAAGGAAATCAACGA+CGG | 0.722306 | 2.1:-49335620 | None:intergenic |
| TGCCACTTGAAATACCTCTG+TGG | 0.737136 | 2.1:-49336871 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTCATTAATGAATTTATTTT+TGG | - | chr2.1:49336443-49336462 | None:intergenic | 15.0% |
| !! | GAACTAAAAAATTGTATTGA+AGG | - | chr2.1:49335178-49335197 | None:intergenic | 20.0% |
| !! | TAAAAAATTGTATTGAAGGA+GGG | - | chr2.1:49335174-49335193 | None:intergenic | 20.0% |
| !!! | AAAGTTTTTTGTAGAACTTA+TGG | - | chr2.1:49336950-49336969 | None:intergenic | 20.0% |
| !!! | AAATTTGTTTTATGTAGAAC+AGG | + | chr2.1:49336686-49336705 | MS.gene64417:CDS | 20.0% |
| !!! | AACAAATAATCTAGTTTGTT+TGG | - | chr2.1:49336196-49336215 | None:intergenic | 20.0% |
| !!! | AATTTGTTTTATGTAGAACA+GGG | + | chr2.1:49336687-49336706 | MS.gene64417:CDS | 20.0% |
| !!! | CTACATAAAACAAATTTTCA+AGG | - | chr2.1:49336683-49336702 | None:intergenic | 20.0% |
| !!! | TAAAAAAGTGATTTTGATCA+CGG | + | chr2.1:49336217-49336236 | MS.gene64417:intron | 20.0% |
| ! | AATTTGAAAGATGTAAGGAA+AGG | + | chr2.1:49336834-49336853 | MS.gene64417:CDS | 25.0% |
| ! | AGAAGAAAAATTTCAAGATG+AGG | + | chr2.1:49336805-49336824 | MS.gene64417:CDS | 25.0% |
| ! | CAAAGCCAAATAATTAGAAT+CGG | - | chr2.1:49334810-49334829 | None:intergenic | 25.0% |
| ! | CTAAAAAATTGTATTGAAGG+AGG | - | chr2.1:49335175-49335194 | None:intergenic | 25.0% |
| ! | TAAATCACATATACCTAAAG+AGG | + | chr2.1:49334769-49334788 | MS.gene64417:CDS | 25.0% |
| ! | TAACAAAAAAATTTCCAAGG+TGG | - | chr2.1:49335366-49335385 | None:intergenic | 25.0% |
| ! | TTAATCTGAAGACTAACAAA+AGG | + | chr2.1:49337009-49337028 | MS.gene64417:intron | 25.0% |
| ! | TTATAACAAACAACATTCCA+CGG | - | chr2.1:49335689-49335708 | None:intergenic | 25.0% |
| ! | TTGACAAATATCTAAATCCA+GGG | - | chr2.1:49335901-49335920 | None:intergenic | 25.0% |
| ! | TTGCAAATTTGAAAGATGTA+AGG | + | chr2.1:49336829-49336848 | MS.gene64417:CDS | 25.0% |
| !! | TTGTTATAAAGGTGTATTGA+AGG | + | chr2.1:49335700-49335719 | MS.gene64417:intron | 25.0% |
| !!! | AATTCATTAATGAGTATCGA+TGG | + | chr2.1:49336449-49336468 | MS.gene64417:intron | 25.0% |
| !!! | TGGAATGTTGTTTGTTATAA+AGG | + | chr2.1:49335689-49335708 | MS.gene64417:intron | 25.0% |
| AAACAAAGCCTTAGAGTTAA+TGG | + | chr2.1:49335333-49335352 | MS.gene64417:intron | 30.0% | |
| AACTTAATTAACGAAACTGC+AGG | - | chr2.1:49335598-49335617 | None:intergenic | 30.0% | |
| AATATCTAAATCCAGGGATA+TGG | - | chr2.1:49335895-49335914 | None:intergenic | 30.0% | |
| AATATTAAACCCTCCTCATT+TGG | - | chr2.1:49335203-49335222 | None:intergenic | 30.0% | |
| AATCAACTCAAATGCATTCA+TGG | - | chr2.1:49336640-49336659 | None:intergenic | 30.0% | |
| ACCTATCTTTGTTCTTCTTA+AGG | - | chr2.1:49336348-49336367 | None:intergenic | 30.0% | |
| ATATTAAACCCTCCTCATTT+GGG | - | chr2.1:49335202-49335221 | None:intergenic | 30.0% | |
| ATCAATGAACAAAGTAGAGA+AGG | + | chr2.1:49334887-49334906 | MS.gene64417:CDS | 30.0% | |
| ATGTAGAACAGGGATTTAAA+AGG | + | chr2.1:49336697-49336716 | MS.gene64417:CDS | 30.0% | |
| GCGTAACAAAAAAATTTCCA+AGG | - | chr2.1:49335369-49335388 | None:intergenic | 30.0% | |
| GGAACTAAAAGAAGAGAATA+AGG | - | chr2.1:49337041-49337060 | None:intergenic | 30.0% | |
| GTTGAAGTAAGGAAATCAAA+AGG | + | chr2.1:49336909-49336928 | MS.gene64417:intron | 30.0% | |
| GTTGACAAATATCTAAATCC+AGG | - | chr2.1:49335902-49335921 | None:intergenic | 30.0% | |
| GTTGTGAATGAATGTTTCTT+CGG | - | chr2.1:49335484-49335503 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAGGAAAAT+GGG | - | chr2.1:49335260-49335279 | None:intergenic | 30.0% | |
| TGTAGAACAGGGATTTAAAA+GGG | + | chr2.1:49336698-49336717 | MS.gene64417:CDS | 30.0% | |
| TTAAGAAGAACAAAGATAGG+TGG | + | chr2.1:49336347-49336366 | MS.gene64417:intron | 30.0% | |
| TTGCTCCGATTCTAATTATT+TGG | + | chr2.1:49334802-49334821 | MS.gene64417:CDS | 30.0% | |
| ! | AGAAGCTGTCTTTAAAGATT+CGG | + | chr2.1:49336571-49336590 | MS.gene64417:intron | 30.0% |
| ! | ATTGAAGGCTGATTTAATTG+CGG | + | chr2.1:49335715-49335734 | MS.gene64417:intron | 30.0% |
| ! | ATTTTCTTTAACACTCCTCT+TGG | - | chr2.1:49336419-49336438 | None:intergenic | 30.0% |
| ! | CGATTCTAATTATTTGGCTT+TGG | + | chr2.1:49334808-49334827 | MS.gene64417:CDS | 30.0% |
| ! | GTCATATCAATGACTGTTTT+TGG | + | chr2.1:49335804-49335823 | MS.gene64417:intron | 30.0% |
| ! | GTTCTTTCTTTTCTGTCATA+TGG | - | chr2.1:49336604-49336623 | None:intergenic | 30.0% |
| ! | TTATAAGCTTCCAGTTTTTG+AGG | + | chr2.1:49336520-49336539 | MS.gene64417:intron | 30.0% |
| ! | TTCTTAAGGCACATTTGTTA+CGG | - | chr2.1:49336334-49336353 | None:intergenic | 30.0% |
| !! | TACTGAGTATTGGAATCTTT+GGG | + | chr2.1:49335411-49335430 | MS.gene64417:CDS | 30.0% |
| !! | TTCTAATTATTTGGCTTTGG+AGG | + | chr2.1:49334811-49334830 | MS.gene64417:CDS | 30.0% |
| AAAACTTTCAACAAGCTTGC+AGG | + | chr2.1:49336962-49336981 | MS.gene64417:intron | 35.0% | |
| AAACTTTCAACAAGCTTGCA+GGG | + | chr2.1:49336963-49336982 | MS.gene64417:intron | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | - | chr2.1:49335257-49335276 | None:intergenic | 35.0% | |
| ACTAGAAAGGAAATCAACGA+CGG | - | chr2.1:49335623-49335642 | None:intergenic | 35.0% | |
| ACTTCAACCATATGAAGAGA+AGG | - | chr2.1:49336897-49336916 | None:intergenic | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | - | chr2.1:49335256-49335275 | None:intergenic | 35.0% | |
| AGGGATTTAAAAGGGAAACA+AGG | + | chr2.1:49336706-49336725 | MS.gene64417:CDS | 35.0% | |
| CAAACACTAACAACCTCTTT+AGG | - | chr2.1:49334785-49334804 | None:intergenic | 35.0% | |
| CTCTTCATATGGTTGAAGTA+AGG | + | chr2.1:49336898-49336917 | MS.gene64417:intron | 35.0% | |
| GAAATCAAAAGGAGATACGT+TGG | + | chr2.1:49336920-49336939 | MS.gene64417:intron | 35.0% | |
| GCCTTAAGAAGAACAAAGAT+AGG | + | chr2.1:49336344-49336363 | MS.gene64417:intron | 35.0% | |
| GTAATCCACCATTAACTCTA+AGG | - | chr2.1:49335344-49335363 | None:intergenic | 35.0% | |
| GTGGAAAATATGAGGGAAAA+TGG | + | chr2.1:49335000-49335019 | MS.gene64417:intron | 35.0% | |
| GTGGAAGAAATAGAGGAAAA+TGG | - | chr2.1:49335261-49335280 | None:intergenic | 35.0% | |
| TATTAAACCCTCCTCATTTG+GGG | - | chr2.1:49335201-49335220 | None:intergenic | 35.0% | |
| TGAAGCTGAAAACAAGGTAT+GGG | + | chr2.1:49334918-49334937 | MS.gene64417:intron | 35.0% | |
| TGACAGAAAAGAAAGAACAG+CGG | + | chr2.1:49336606-49336625 | MS.gene64417:intron | 35.0% | |
| TTACCAGTCATTTGAATTCG+AGG | + | chr2.1:49335537-49335556 | MS.gene64417:CDS | 35.0% | |
| TTACGCATGATATTCCTCAT+AGG | + | chr2.1:49335383-49335402 | MS.gene64417:intron | 35.0% | |
| TTGAAGGGTGGAAAATATGA+GGG | + | chr2.1:49334993-49335012 | MS.gene64417:intron | 35.0% | |
| TTTGAAGGGTGGAAAATATG+AGG | + | chr2.1:49334992-49335011 | MS.gene64417:intron | 35.0% | |
| ! | AGATGATTGTGCTGAGATTT+TGG | + | chr2.1:49336475-49336494 | MS.gene64417:intron | 35.0% |
| ! | AGTTGATTTCCATGTCTAGA+GGG | + | chr2.1:49336652-49336671 | MS.gene64417:intron | 35.0% |
| ! | ATTAAACGAAGCACCTTGTA+AGG | - | chr2.1:49334869-49334888 | None:intergenic | 35.0% |
| ! | ATTGTATTGAAGGAGGGTTT+TGG | - | chr2.1:49335168-49335187 | None:intergenic | 35.0% |
| ! | CAAATGCATTCATGGATTGT+TGG | - | chr2.1:49336632-49336651 | None:intergenic | 35.0% |
| ! | CAAGGTATGGGAATTTTCTT+AGG | + | chr2.1:49334930-49334949 | MS.gene64417:intron | 35.0% |
| ! | GTTCCATTTGCTACTACTAT+TGG | + | chr2.1:49337056-49337075 | MS.gene64417:intron | 35.0% |
| ! | GTTGATTTCCTTTCTAGTGA+TGG | + | chr2.1:49335625-49335644 | MS.gene64417:CDS | 35.0% |
| ! | TTAAACGAAGCACCTTGTAA+GGG | - | chr2.1:49334868-49334887 | None:intergenic | 35.0% |
| ! | TTGTATTGAAGGAGGGTTTT+GGG | - | chr2.1:49335167-49335186 | None:intergenic | 35.0% |
| !! | AACTTTCCAACAGTTTTGTG+TGG | - | chr2.1:49337096-49337115 | None:intergenic | 35.0% |
| !! | CTACTGAGTATTGGAATCTT+TGG | + | chr2.1:49335410-49335429 | MS.gene64417:CDS | 35.0% |
| !! | TTCCAGTTTTTGAGGAAAGT+GGG | + | chr2.1:49336528-49336547 | MS.gene64417:intron | 35.0% |
| !!! | GATGACTTGTCGTTGATTTT+TGG | + | chr2.1:49335511-49335530 | MS.gene64417:CDS | 35.0% |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | + | chr2.1:49335187-49335206 | MS.gene64417:intron | 35.0% |
| AAACCTTAATGTTGCCACAG+AGG | + | chr2.1:49336857-49336876 | MS.gene64417:CDS | 40.0% | |
| AGAATGCCACACAAAACTGT+TGG | + | chr2.1:49337087-49337106 | MS.gene64417:CDS | 40.0% | |
| AGTCCTCTCAACTAGATGAT+TGG | - | chr2.1:49334750-49334769 | None:intergenic | 40.0% | |
| ATACCTCTGTGGCAACATTA+AGG | - | chr2.1:49336863-49336882 | None:intergenic | 40.0% | |
| ATGACATTCGCAGAAAGATC+AGG | - | chr2.1:49335789-49335808 | None:intergenic | 40.0% | |
| ATTAAACCCTCCTCATTTGG+GGG | - | chr2.1:49335200-49335219 | None:intergenic | 40.0% | |
| CAAAGCCTTAGAGTTAATGG+TGG | + | chr2.1:49335336-49335355 | MS.gene64417:intron | 40.0% | |
| CACATGTGAAGCTGAAAACA+AGG | + | chr2.1:49334912-49334931 | MS.gene64417:CDS | 40.0% | |
| CTGCCAATAGTAGTAGCAAA+TGG | - | chr2.1:49337062-49337081 | None:intergenic | 40.0% | |
| CTTCCTCGAATTCAAATGAC+TGG | - | chr2.1:49335543-49335562 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | - | chr2.1:49335255-49335274 | None:intergenic | 40.0% | |
| GAAGAAGCTGCTAAACTTCT+TGG | + | chr2.1:49336771-49336790 | MS.gene64417:CDS | 40.0% | |
| GTCATTTGAATTCGAGGAAG+TGG | + | chr2.1:49335543-49335562 | MS.gene64417:CDS | 40.0% | |
| GTGAAGCTGAAAACAAGGTA+TGG | + | chr2.1:49334917-49334936 | MS.gene64417:intron | 40.0% | |
| TGAGCAAGTGGAAGAAATAG+AGG | - | chr2.1:49335268-49335287 | None:intergenic | 40.0% | |
| TTGCTACTACTATTGGCAGT+TGG | + | chr2.1:49337063-49337082 | MS.gene64417:intron | 40.0% | |
| TTTGAATTCGAGGAAGTGGA+AGG | + | chr2.1:49335547-49335566 | MS.gene64417:CDS | 40.0% | |
| ! | CATCTTTTCTCACAAGCAGT+CGG | + | chr2.1:49335863-49335882 | MS.gene64417:intron | 40.0% |
| ! | GAGTTGATTTCCATGTCTAG+AGG | + | chr2.1:49336651-49336670 | MS.gene64417:intron | 40.0% |
| ! | TGTATTGAAGGAGGGTTTTG+GGG | - | chr2.1:49335166-49335185 | None:intergenic | 40.0% |
| ! | TTGTTGATTATCTCGTCTGC+AGG | - | chr2.1:49336747-49336766 | None:intergenic | 40.0% |
| ! | TTTCCTTTCTAGTGATGGAG+TGG | + | chr2.1:49335630-49335649 | MS.gene64417:CDS | 40.0% |
| !! | ATAGGAGTGCTACTGAGTAT+TGG | + | chr2.1:49335401-49335420 | MS.gene64417:intron | 40.0% |
| !! | CTTCCAGTTTTTGAGGAAAG+TGG | + | chr2.1:49336527-49336546 | MS.gene64417:intron | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr2.1:49335326-49335345 | None:intergenic | 40.0% |
| !! | TCCAGTTTTTGAGGAAAGTG+GGG | + | chr2.1:49336529-49336548 | MS.gene64417:intron | 40.0% |
| !! | TTAATGGTGGATTACCACCT+TGG | + | chr2.1:49335349-49335368 | MS.gene64417:intron | 40.0% |
| !!! | CTTTGTTTTGCGAGTTTGGA+GGG | + | chr2.1:49334953-49334972 | MS.gene64417:intron | 40.0% |
| !!! | TAGGCTTTGTTTTGCGAGTT+TGG | + | chr2.1:49334949-49334968 | MS.gene64417:intron | 40.0% |
| !!! | TTTGGCAGCAGTTTTGAAGA+GGG | + | chr2.1:49335822-49335841 | MS.gene64417:intron | 40.0% |
| !!! | TTTTGGCAGCAGTTTTGAAG+AGG | + | chr2.1:49335821-49335840 | MS.gene64417:intron | 40.0% |
| AATTCACAACCTGATGCTCC+AGG | + | chr2.1:49334842-49334861 | MS.gene64417:CDS | 45.0% | |
| AGGGGAAGGTTTGGGAAAAA+GGG | - | chr2.1:49335293-49335312 | None:intergenic | 45.0% | |
| AGTGGCACCTTCTCTTCATA+TGG | + | chr2.1:49336887-49336906 | MS.gene64417:CDS | 45.0% | |
| GAGCCAATCATCTAGTTGAG+AGG | + | chr2.1:49334744-49334763 | MS.gene64417:CDS | 45.0% | |
| GCAAACTGATTGAGACCAAG+AGG | + | chr2.1:49336401-49336420 | MS.gene64417:intron | 45.0% | |
| GGAAAAAGGGAATGAGCAAG+TGG | - | chr2.1:49335280-49335299 | None:intergenic | 45.0% | |
| TACTCAGTAGCACTCCTATG+AGG | - | chr2.1:49335400-49335419 | None:intergenic | 45.0% | |
| TCCCCACTTTCCTCAAAAAC+TGG | - | chr2.1:49336533-49336552 | None:intergenic | 45.0% | |
| TTAGTTCCCCCAAATGAGGA+GGG | + | chr2.1:49335191-49335210 | MS.gene64417:intron | 45.0% | |
| ! | CTGAGATTTTGGACGACGAA+TGG | + | chr2.1:49336486-49336505 | MS.gene64417:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr2.1:49335321-49335340 | None:intergenic | 45.0% |
| ! | TGCCACTTGAAATACCTCTG+TGG | - | chr2.1:49336874-49336893 | None:intergenic | 45.0% |
| ! | TTTAGTTCCCCCAAATGAGG+AGG | + | chr2.1:49335190-49335209 | MS.gene64417:intron | 45.0% |
| ! | TTTTGCGAGTTTGGAGGGAA+GGG | + | chr2.1:49334958-49334977 | MS.gene64417:intron | 45.0% |
| !! | ACTAGATGATTGGCTCTGAC+AGG | - | chr2.1:49334740-49334759 | None:intergenic | 45.0% |
| !! | CTAGATGATTGGCTCTGACA+GGG | - | chr2.1:49334739-49334758 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr2.1:49335322-49335341 | None:intergenic | 45.0% |
| !! | GTATTGAAGGAGGGTTTTGG+GGG | - | chr2.1:49335165-49335184 | None:intergenic | 45.0% |
| !! | TGCCACAGAGGTATTTCAAG+TGG | + | chr2.1:49336869-49336888 | MS.gene64417:CDS | 45.0% |
| !!! | GCTTTGTTTTGCGAGTTTGG+AGG | + | chr2.1:49334952-49334971 | MS.gene64417:intron | 45.0% |
| !!! | TATTGAAGGAGGGTTTTGGG+GGG | - | chr2.1:49335164-49335183 | None:intergenic | 45.0% |
| !!! | AAAAAATATATTTTTTTTAG+AGG | + | chr2.1:49336102-49336121 | MS.gene64417:intron | 5.0% |
| !!! | AATAATTTTTTTAAAATAAG+TGG | - | chr2.1:49335979-49335998 | None:intergenic | 5.0% |
| AAGGTTCAGCCCTCTAGACA+TGG | - | chr2.1:49336664-49336683 | None:intergenic | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | - | chr2.1:49335252-49335271 | None:intergenic | 50.0% | |
| GAGGGGAAGGTTTGGGAAAA+AGG | - | chr2.1:49335294-49335313 | None:intergenic | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | - | chr2.1:49335251-49335270 | None:intergenic | 50.0% | |
| TCAGGCTTCTTGCTAGCCAT+GGG | + | chr2.1:49335661-49335680 | MS.gene64417:intron | 50.0% | |
| TGGCCACTCCATCACTAGAA+AGG | - | chr2.1:49335636-49335655 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGAAG+GGG | + | chr2.1:49334959-49334978 | MS.gene64417:intron | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | - | chr2.1:49335316-49335335 | None:intergenic | 50.0% | |
| ! | AAAATGGGAGGGGAGGGTTT+TGG | - | chr2.1:49335245-49335264 | None:intergenic | 50.0% |
| ! | AAATGGGAGGGGAGGGTTTT+GGG | - | chr2.1:49335244-49335263 | None:intergenic | 50.0% |
| ! | AGGCTGATTTAATTGCGGCG+CGG | + | chr2.1:49335720-49335739 | MS.gene64417:intron | 50.0% |
| ! | CTTTTCTCACAAGCAGTCGG+AGG | + | chr2.1:49335866-49335885 | MS.gene64417:intron | 50.0% |
| ! | GTTTTGCGAGTTTGGAGGGA+AGG | + | chr2.1:49334957-49334976 | MS.gene64417:intron | 50.0% |
| !! | CAAGCTTGCAGGGTGTTGTT+TGG | + | chr2.1:49336973-49336992 | MS.gene64417:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr2.1:49335323-49335342 | None:intergenic | 50.0% |
| !!! | ATTGAAGGAGGGTTTTGGGG+GGG | - | chr2.1:49335163-49335182 | None:intergenic | 50.0% |
| ACAACATTCCACGGCACCCA+TGG | - | chr2.1:49335680-49335699 | None:intergenic | 55.0% | |
| AGCTTCTACACCGTCGAGCT+TGG | - | chr2.1:49336558-49336577 | None:intergenic | 55.0% | |
| AGTGGGGAAACCAAGCTCGA+CGG | + | chr2.1:49336545-49336564 | MS.gene64417:intron | 55.0% | |
| GAGTTTGGAGGGAAGGGGAA+GGG | + | chr2.1:49334964-49334983 | MS.gene64417:intron | 55.0% | |
| GTCAGGCTTCTTGCTAGCCA+TGG | + | chr2.1:49335660-49335679 | MS.gene64417:intron | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | - | chr2.1:49335317-49335336 | None:intergenic | 55.0% | |
| TAGCAAGAAGCCTGACCGGA+TGG | - | chr2.1:49335656-49335675 | None:intergenic | 55.0% | |
| TGATGCTCCAGGCCCTTACA+AGG | + | chr2.1:49334853-49334872 | MS.gene64417:CDS | 55.0% | |
| TGGCTAGCAAGAAGCCTGAC+CGG | - | chr2.1:49335660-49335679 | None:intergenic | 55.0% | |
| ! | AATGGGAGGGGAGGGTTTTG+GGG | - | chr2.1:49335243-49335262 | None:intergenic | 55.0% |
| ! | AGGGGAAGGGAAGGCTTTGA+AGG | + | chr2.1:49334977-49334996 | MS.gene64417:intron | 55.0% |
| ! | CTAGTGATGGAGTGGCCATC+CGG | + | chr2.1:49335638-49335657 | MS.gene64417:CDS | 55.0% |
| ! | TTGTAAGGGCCTGGAGCATC+AGG | - | chr2.1:49334854-49334873 | None:intergenic | 55.0% |
| !! | GAAGGGAAGGCTTTGAAGGG+TGG | + | chr2.1:49334981-49335000 | MS.gene64417:intron | 55.0% |
| !! | GGGGAAGGGAAGGCTTTGAA+GGG | + | chr2.1:49334978-49334997 | MS.gene64417:intron | 55.0% |
| !!! | GGTTTTGGGGGGGTTTTGGA+GGG | - | chr2.1:49335153-49335172 | None:intergenic | 55.0% |
| CGAGTTTGGAGGGAAGGGGA+AGG | + | chr2.1:49334963-49334982 | MS.gene64417:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+GGG | - | chr2.1:49335312-49335331 | None:intergenic | 60.0% | |
| GAGTTTGGAGGGGAAGGGAG+GGG | - | chr2.1:49335311-49335330 | None:intergenic | 60.0% | |
| GGGAAGGGAGGGGAAGGTTT+GGG | - | chr2.1:49335301-49335320 | None:intergenic | 60.0% | |
| TTGGAGGGAAGGGGAAGGGA+AGG | + | chr2.1:49334968-49334987 | MS.gene64417:intron | 60.0% | |
| ! | CGAAGCACCTTGTAAGGGCC+TGG | - | chr2.1:49334863-49334882 | None:intergenic | 60.0% |
| !! | ATGGGAGGGGAGGGTTTTGG+GGG | - | chr2.1:49335242-49335261 | None:intergenic | 60.0% |
| !! | GTCGGAGGTGTCCATATCCC+TGG | + | chr2.1:49335881-49335900 | MS.gene64417:intron | 60.0% |
| !!! | GGAGGGTTTTGGGGGGGTTT+TGG | - | chr2.1:49335157-49335176 | None:intergenic | 60.0% |
| !!! | GGGTTTTGGGGGGGTTTTGG+AGG | - | chr2.1:49335154-49335173 | None:intergenic | 60.0% |
| GATGGAGTGGCCATCCGGTC+AGG | + | chr2.1:49335643-49335662 | MS.gene64417:intron | 65.0% | |
| GCGAGTTTGGAGGGGAAGGG+AGG | - | chr2.1:49335313-49335332 | None:intergenic | 65.0% | |
| GGGGAAGGGAGGGGAAGGTT+TGG | - | chr2.1:49335302-49335321 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+AGG | - | chr2.1:49335307-49335326 | None:intergenic | 65.0% | |
| ! | CTTGCTAGCCATGGGTGCCG+TGG | + | chr2.1:49335669-49335688 | MS.gene64417:intron | 65.0% |
| !!! | TGGGAGGGGAGGGTTTTGGG+GGG | - | chr2.1:49335241-49335260 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 49334722 | 49337117 | 49334722 | ID=MS.gene64417 |
| chr2.1 | mRNA | 49334722 | 49337117 | 49334722 | ID=MS.gene64417.t1;Parent=MS.gene64417 |
| chr2.1 | exon | 49334722 | 49334933 | 49334722 | ID=MS.gene64417.t1.exon1;Parent=MS.gene64417.t1 |
| chr2.1 | CDS | 49334722 | 49334933 | 49334722 | ID=cds.MS.gene64417.t1;Parent=MS.gene64417.t1 |
| chr2.1 | exon | 49335405 | 49335659 | 49335405 | ID=MS.gene64417.t1.exon2;Parent=MS.gene64417.t1 |
| chr2.1 | CDS | 49335405 | 49335659 | 49335405 | ID=cds.MS.gene64417.t1;Parent=MS.gene64417.t1 |
| chr2.1 | exon | 49336671 | 49336914 | 49336671 | ID=MS.gene64417.t1.exon3;Parent=MS.gene64417.t1 |
| chr2.1 | CDS | 49336671 | 49336914 | 49336671 | ID=cds.MS.gene64417.t1;Parent=MS.gene64417.t1 |
| chr2.1 | exon | 49337082 | 49337117 | 49337082 | ID=MS.gene64417.t1.exon4;Parent=MS.gene64417.t1 |
| chr2.1 | CDS | 49337082 | 49337117 | 49337082 | ID=cds.MS.gene64417.t1;Parent=MS.gene64417.t1 |
| Gene Sequence |
| Protein sequence |
