Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58686.t1 | XP_003594885.1 | 99.6 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 1.80E-152 | 548.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58686.t1 | Q9ZV56 | 77.4 | 266 | 55 | 2 | 13 | 277 | 32 | 293 | 4.3e-110 | 399.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58686.t1 | G7INF3 | 99.6 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 1.3e-152 | 548.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049159 | MS.gene58686 | 0.8302 | 3.36E-55 | -1.69E-46 |
MS.gene049254 | MS.gene58686 | 0.822734 | 2.02E-53 | -1.69E-46 |
MS.gene049272 | MS.gene58686 | 0.847573 | 1.06E-59 | -1.69E-46 |
MS.gene049378 | MS.gene58686 | 0.80008 | 1.70E-48 | -1.69E-46 |
MS.gene049404 | MS.gene58686 | 0.845709 | 3.43E-59 | -1.69E-46 |
MS.gene049435 | MS.gene58686 | 0.880205 | 6.65E-70 | -1.69E-46 |
MS.gene049452 | MS.gene58686 | 0.809111 | 2.22E-50 | -1.69E-46 |
MS.gene049501 | MS.gene58686 | 0.807823 | 4.19E-50 | -1.69E-46 |
MS.gene049531 | MS.gene58686 | 0.801679 | 8.04E-49 | -1.69E-46 |
MS.gene049669 | MS.gene58686 | 0.838566 | 2.67E-57 | -1.69E-46 |
MS.gene049850 | MS.gene58686 | 0.825191 | 5.36E-54 | -1.69E-46 |
MS.gene050026 | MS.gene58686 | 0.809059 | 2.28E-50 | -1.69E-46 |
MS.gene050073 | MS.gene58686 | 0.800347 | 1.50E-48 | -1.69E-46 |
MS.gene050156 | MS.gene58686 | 0.836128 | 1.12E-56 | -1.69E-46 |
MS.gene050226 | MS.gene58686 | 0.804882 | 1.74E-49 | -1.69E-46 |
MS.gene050227 | MS.gene58686 | 0.805995 | 1.02E-49 | -1.69E-46 |
MS.gene050228 | MS.gene58686 | 0.811148 | 8.09E-51 | -1.69E-46 |
MS.gene050355 | MS.gene58686 | 0.818031 | 2.42E-52 | -1.69E-46 |
MS.gene050442 | MS.gene58686 | 0.887474 | 1.38E-72 | -1.69E-46 |
MS.gene050559 | MS.gene58686 | 0.800168 | 1.64E-48 | -1.69E-46 |
MS.gene050561 | MS.gene58686 | 0.809549 | 1.79E-50 | -1.69E-46 |
MS.gene050680 | MS.gene58686 | 0.85832 | 8.93E-63 | -1.69E-46 |
MS.gene050750 | MS.gene58686 | 0.837253 | 5.80E-57 | -1.69E-46 |
MS.gene050759 | MS.gene58686 | 0.809452 | 1.88E-50 | -1.69E-46 |
MS.gene050787 | MS.gene58686 | 0.821381 | 4.16E-53 | -1.69E-46 |
MS.gene050807 | MS.gene58686 | 0.802083 | 6.64E-49 | -1.69E-46 |
MS.gene050826 | MS.gene58686 | 0.800701 | 1.27E-48 | -1.69E-46 |
MS.gene050844 | MS.gene58686 | 0.842057 | 3.26E-58 | -1.69E-46 |
MS.gene050953 | MS.gene58686 | 0.837288 | 5.68E-57 | -1.69E-46 |
MS.gene050962 | MS.gene58686 | 0.801911 | 7.20E-49 | -1.69E-46 |
MS.gene051147 | MS.gene58686 | 0.805432 | 1.34E-49 | -1.69E-46 |
MS.gene051180 | MS.gene58686 | 0.80821 | 3.46E-50 | -1.69E-46 |
MS.gene051198 | MS.gene58686 | 0.819613 | 1.06E-52 | -1.69E-46 |
MS.gene051265 | MS.gene58686 | 0.82844 | 8.98E-55 | -1.69E-46 |
MS.gene051279 | MS.gene58686 | 0.803645 | 3.16E-49 | -1.69E-46 |
MS.gene051344 | MS.gene58686 | 0.818561 | 1.84E-52 | -1.69E-46 |
MS.gene051368 | MS.gene58686 | 0.811269 | 7.62E-51 | -1.69E-46 |
MS.gene051594 | MS.gene58686 | 0.80615 | 9.46E-50 | -1.69E-46 |
MS.gene051744 | MS.gene58686 | 0.803565 | 3.28E-49 | -1.69E-46 |
MS.gene051800 | MS.gene58686 | 0.834532 | 2.84E-56 | -1.69E-46 |
MS.gene051924 | MS.gene58686 | -0.806343 | 8.61E-50 | -1.69E-46 |
MS.gene051926 | MS.gene58686 | -0.816496 | 5.37E-52 | -1.69E-46 |
MS.gene051935 | MS.gene58686 | 0.802574 | 5.26E-49 | -1.69E-46 |
MS.gene051957 | MS.gene58686 | 0.803149 | 4.00E-49 | -1.69E-46 |
MS.gene052056 | MS.gene58686 | -0.824306 | 8.67E-54 | -1.69E-46 |
MS.gene052190 | MS.gene58686 | 0.882941 | 6.83E-71 | -1.69E-46 |
MS.gene052333 | MS.gene58686 | 0.87646 | 1.37E-68 | -1.69E-46 |
MS.gene052384 | MS.gene58686 | 0.835919 | 1.27E-56 | -1.69E-46 |
MS.gene052519 | MS.gene58686 | 0.849647 | 2.83E-60 | -1.69E-46 |
MS.gene052582 | MS.gene58686 | 0.81876 | 1.66E-52 | -1.69E-46 |
MS.gene052584 | MS.gene58686 | 0.81273 | 3.66E-51 | -1.69E-46 |
MS.gene052586 | MS.gene58686 | 0.822582 | 2.19E-53 | -1.69E-46 |
MS.gene052611 | MS.gene58686 | 0.816049 | 6.76E-52 | -1.69E-46 |
MS.gene052773 | MS.gene58686 | 0.82761 | 1.42E-54 | -1.69E-46 |
MS.gene052863 | MS.gene58686 | 0.837729 | 4.38E-57 | -1.69E-46 |
MS.gene052867 | MS.gene58686 | 0.811686 | 6.18E-51 | -1.69E-46 |
MS.gene052954 | MS.gene58686 | 0.800956 | 1.13E-48 | -1.69E-46 |
MS.gene053006 | MS.gene58686 | 0.814774 | 1.30E-51 | -1.69E-46 |
MS.gene053054 | MS.gene58686 | -0.820296 | 7.39E-53 | -1.69E-46 |
MS.gene053145 | MS.gene58686 | 0.803103 | 4.09E-49 | -1.69E-46 |
MS.gene053166 | MS.gene58686 | 0.878547 | 2.57E-69 | -1.69E-46 |
MS.gene053201 | MS.gene58686 | 0.83892 | 2.16E-57 | -1.69E-46 |
MS.gene053221 | MS.gene58686 | 0.813753 | 2.18E-51 | -1.69E-46 |
MS.gene053226 | MS.gene58686 | 0.807032 | 6.16E-50 | -1.69E-46 |
MS.gene053621 | MS.gene58686 | 0.808857 | 2.52E-50 | -1.69E-46 |
MS.gene053953 | MS.gene58686 | 0.813051 | 3.11E-51 | -1.69E-46 |
MS.gene053966 | MS.gene58686 | 0.846639 | 1.91E-59 | -1.69E-46 |
MS.gene053967 | MS.gene58686 | 0.8437 | 1.19E-58 | -1.69E-46 |
MS.gene053974 | MS.gene58686 | 0.818286 | 2.12E-52 | -1.69E-46 |
MS.gene053998 | MS.gene58686 | 0.820283 | 7.44E-53 | -1.69E-46 |
MS.gene05414 | MS.gene58686 | 0.808001 | 3.84E-50 | -1.69E-46 |
MS.gene05415 | MS.gene58686 | 0.833347 | 5.62E-56 | -1.69E-46 |
MS.gene054236 | MS.gene58686 | 0.846213 | 2.50E-59 | -1.69E-46 |
MS.gene054291 | MS.gene58686 | -0.852229 | 5.29E-61 | -1.69E-46 |
MS.gene054405 | MS.gene58686 | 0.829056 | 6.37E-55 | -1.69E-46 |
MS.gene054467 | MS.gene58686 | 0.871136 | 8.60E-67 | -1.69E-46 |
MS.gene054468 | MS.gene58686 | 0.865997 | 3.93E-65 | -1.69E-46 |
MS.gene054472 | MS.gene58686 | 0.81658 | 5.14E-52 | -1.69E-46 |
MS.gene05447 | MS.gene58686 | 0.805012 | 1.64E-49 | -1.69E-46 |
MS.gene054559 | MS.gene58686 | 0.865697 | 4.89E-65 | -1.69E-46 |
MS.gene05462 | MS.gene58686 | 0.801414 | 9.11E-49 | -1.69E-46 |
MS.gene054651 | MS.gene58686 | 0.840357 | 9.13E-58 | -1.69E-46 |
MS.gene054775 | MS.gene58686 | 0.811894 | 5.57E-51 | -1.69E-46 |
MS.gene05510 | MS.gene58686 | 0.831224 | 1.88E-55 | -1.69E-46 |
MS.gene055166 | MS.gene58686 | 0.80067 | 1.29E-48 | -1.69E-46 |
MS.gene055227 | MS.gene58686 | 0.833183 | 6.17E-56 | -1.69E-46 |
MS.gene055228 | MS.gene58686 | 0.816069 | 6.69E-52 | -1.69E-46 |
MS.gene055356 | MS.gene58686 | 0.855624 | 5.57E-62 | -1.69E-46 |
MS.gene055357 | MS.gene58686 | 0.836492 | 9.07E-57 | -1.69E-46 |
MS.gene055358 | MS.gene58686 | 0.864077 | 1.58E-64 | -1.69E-46 |
MS.gene055464 | MS.gene58686 | 0.804369 | 2.23E-49 | -1.69E-46 |
MS.gene055466 | MS.gene58686 | 0.808253 | 3.39E-50 | -1.69E-46 |
MS.gene055608 | MS.gene58686 | 0.802342 | 5.87E-49 | -1.69E-46 |
MS.gene055623 | MS.gene58686 | 0.820349 | 7.19E-53 | -1.69E-46 |
MS.gene055701 | MS.gene58686 | 0.845455 | 4.02E-59 | -1.69E-46 |
MS.gene055818 | MS.gene58686 | 0.881614 | 2.07E-70 | -1.69E-46 |
MS.gene055926 | MS.gene58686 | 0.814825 | 1.26E-51 | -1.69E-46 |
MS.gene05604 | MS.gene58686 | 0.807655 | 4.54E-50 | -1.69E-46 |
MS.gene056050 | MS.gene58686 | 0.813987 | 1.94E-51 | -1.69E-46 |
MS.gene056162 | MS.gene58686 | 0.858924 | 5.90E-63 | -1.69E-46 |
MS.gene056173 | MS.gene58686 | 0.849184 | 3.81E-60 | -1.69E-46 |
MS.gene056174 | MS.gene58686 | 0.826602 | 2.48E-54 | -1.69E-46 |
MS.gene056252 | MS.gene58686 | 0.813227 | 2.85E-51 | -1.69E-46 |
MS.gene056366 | MS.gene58686 | 0.829178 | 5.95E-55 | -1.69E-46 |
MS.gene056498 | MS.gene58686 | 0.803679 | 3.11E-49 | -1.69E-46 |
MS.gene056506 | MS.gene58686 | 0.845631 | 3.60E-59 | -1.69E-46 |
MS.gene056595 | MS.gene58686 | 0.80407 | 2.58E-49 | -1.69E-46 |
MS.gene056873 | MS.gene58686 | 0.82421 | 9.13E-54 | -1.69E-46 |
MS.gene057012 | MS.gene58686 | 0.809563 | 1.78E-50 | -1.69E-46 |
MS.gene057021 | MS.gene58686 | 0.828619 | 8.13E-55 | -1.69E-46 |
MS.gene057026 | MS.gene58686 | 0.837249 | 5.81E-57 | -1.69E-46 |
MS.gene057060 | MS.gene58686 | 0.833498 | 5.15E-56 | -1.69E-46 |
MS.gene057156 | MS.gene58686 | -0.809958 | 1.46E-50 | -1.69E-46 |
MS.gene057194 | MS.gene58686 | 0.829236 | 5.76E-55 | -1.69E-46 |
MS.gene057200 | MS.gene58686 | 0.804181 | 2.44E-49 | -1.69E-46 |
MS.gene057314 | MS.gene58686 | 0.81451 | 1.49E-51 | -1.69E-46 |
MS.gene057414 | MS.gene58686 | 0.816321 | 5.87E-52 | -1.69E-46 |
MS.gene057444 | MS.gene58686 | 0.8019 | 7.24E-49 | -1.69E-46 |
MS.gene057598 | MS.gene58686 | 0.809319 | 2.01E-50 | -1.69E-46 |
MS.gene05761 | MS.gene58686 | 0.813194 | 2.90E-51 | -1.69E-46 |
MS.gene057693 | MS.gene58686 | 0.833918 | 4.05E-56 | -1.69E-46 |
MS.gene057869 | MS.gene58686 | 0.84316 | 1.66E-58 | -1.69E-46 |
MS.gene057915 | MS.gene58686 | 0.80273 | 4.88E-49 | -1.69E-46 |
MS.gene058009 | MS.gene58686 | 0.81848 | 1.92E-52 | -1.69E-46 |
MS.gene058010 | MS.gene58686 | 0.823962 | 1.04E-53 | -1.69E-46 |
MS.gene058037 | MS.gene58686 | 0.814911 | 1.21E-51 | -1.69E-46 |
MS.gene058088 | MS.gene58686 | 0.800894 | 1.16E-48 | -1.69E-46 |
MS.gene058146 | MS.gene58686 | 0.808742 | 2.67E-50 | -1.69E-46 |
MS.gene058548 | MS.gene58686 | 0.822591 | 2.18E-53 | -1.69E-46 |
MS.gene058625 | MS.gene58686 | 0.844815 | 5.99E-59 | -1.69E-46 |
MS.gene058636 | MS.gene58686 | 0.814157 | 1.78E-51 | -1.69E-46 |
MS.gene058829 | MS.gene58686 | 0.839031 | 2.02E-57 | -1.69E-46 |
MS.gene058979 | MS.gene58686 | 0.832461 | 9.33E-56 | -1.69E-46 |
MS.gene059128 | MS.gene58686 | 0.826925 | 2.08E-54 | -1.69E-46 |
MS.gene059161 | MS.gene58686 | 0.818705 | 1.70E-52 | -1.69E-46 |
MS.gene059272 | MS.gene58686 | 0.832523 | 9.01E-56 | -1.69E-46 |
MS.gene059317 | MS.gene58686 | 0.801476 | 8.85E-49 | -1.69E-46 |
MS.gene059550 | MS.gene58686 | 0.801869 | 7.35E-49 | -1.69E-46 |
MS.gene059584 | MS.gene58686 | 0.837304 | 5.63E-57 | -1.69E-46 |
MS.gene059607 | MS.gene58686 | 0.826384 | 2.80E-54 | -1.69E-46 |
MS.gene059789 | MS.gene58686 | 0.832581 | 8.71E-56 | -1.69E-46 |
MS.gene05979 | MS.gene58686 | 0.803073 | 4.15E-49 | -1.69E-46 |
MS.gene059842 | MS.gene58686 | 0.830278 | 3.21E-55 | -1.69E-46 |
MS.gene060011 | MS.gene58686 | 0.839237 | 1.79E-57 | -1.69E-46 |
MS.gene060137 | MS.gene58686 | -0.821679 | 3.55E-53 | -1.69E-46 |
MS.gene060167 | MS.gene58686 | 0.800974 | 1.12E-48 | -1.69E-46 |
MS.gene060310 | MS.gene58686 | 0.808456 | 3.07E-50 | -1.69E-46 |
MS.gene060312 | MS.gene58686 | 0.801785 | 7.64E-49 | -1.69E-46 |
MS.gene060322 | MS.gene58686 | 0.879986 | 7.96E-70 | -1.69E-46 |
MS.gene060521 | MS.gene58686 | 0.802475 | 5.51E-49 | -1.69E-46 |
MS.gene06052 | MS.gene58686 | 0.842234 | 2.93E-58 | -1.69E-46 |
MS.gene060553 | MS.gene58686 | 0.855558 | 5.82E-62 | -1.69E-46 |
MS.gene060572 | MS.gene58686 | 0.822611 | 2.16E-53 | -1.69E-46 |
MS.gene060634 | MS.gene58686 | -0.824744 | 6.84E-54 | -1.69E-46 |
MS.gene060683 | MS.gene58686 | 0.831447 | 1.66E-55 | -1.69E-46 |
MS.gene060685 | MS.gene58686 | 0.833747 | 4.47E-56 | -1.69E-46 |
MS.gene060781 | MS.gene58686 | 0.828602 | 8.21E-55 | -1.69E-46 |
MS.gene060802 | MS.gene58686 | 0.81837 | 2.03E-52 | -1.69E-46 |
MS.gene060803 | MS.gene58686 | 0.840303 | 9.43E-58 | -1.69E-46 |
MS.gene060905 | MS.gene58686 | 0.827868 | 1.23E-54 | -1.69E-46 |
MS.gene060918 | MS.gene58686 | 0.853082 | 3.02E-61 | -1.69E-46 |
MS.gene060919 | MS.gene58686 | 0.826451 | 2.69E-54 | -1.69E-46 |
MS.gene060998 | MS.gene58686 | 0.822736 | 2.02E-53 | -1.69E-46 |
MS.gene061040 | MS.gene58686 | -0.826841 | 2.17E-54 | -1.69E-46 |
MS.gene061114 | MS.gene58686 | -0.811957 | 5.40E-51 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58686.t1 | MTR_2g035810 | 99.649 | 285 | 1 | 0 | 1 | 285 | 1 | 285 | 0.0 | 590 |
MS.gene58686.t1 | MTR_3g081530 | 83.673 | 245 | 36 | 1 | 13 | 257 | 15 | 255 | 3.81e-156 | 437 |
MS.gene58686.t1 | MTR_4g064813 | 94.375 | 160 | 8 | 1 | 125 | 284 | 312 | 470 | 1.16e-98 | 297 |
MS.gene58686.t1 | MTR_4g064813 | 57.971 | 138 | 22 | 4 | 1 | 138 | 1 | 102 | 2.63e-39 | 143 |
MS.gene58686.t1 | MTR_7g074620 | 31.429 | 245 | 148 | 7 | 11 | 248 | 50 | 281 | 3.52e-28 | 111 |
MS.gene58686.t1 | MTR_7g074620 | 31.429 | 245 | 148 | 7 | 11 | 248 | 50 | 281 | 3.77e-28 | 112 |
MS.gene58686.t1 | MTR_7g074620 | 36.957 | 92 | 54 | 2 | 18 | 107 | 258 | 347 | 6.19e-12 | 65.9 |
MS.gene58686.t1 | MTR_8g101470 | 42.553 | 141 | 73 | 3 | 16 | 152 | 65 | 201 | 3.86e-26 | 106 |
MS.gene58686.t1 | MTR_8g101470 | 35.484 | 155 | 93 | 4 | 18 | 169 | 256 | 406 | 6.14e-19 | 86.3 |
MS.gene58686.t1 | MTR_8g101470 | 42.254 | 142 | 74 | 3 | 16 | 153 | 65 | 202 | 9.54e-26 | 105 |
MS.gene58686.t1 | MTR_7g074620 | 29.213 | 178 | 108 | 6 | 78 | 248 | 5 | 171 | 3.02e-13 | 68.9 |
MS.gene58686.t1 | MTR_7g074620 | 36.957 | 92 | 54 | 2 | 18 | 107 | 148 | 237 | 4.44e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene58686.t1 | AT2G32260 | 78.652 | 267 | 52 | 2 | 12 | 277 | 31 | 293 | 2.77e-156 | 439 |
MS.gene58686.t1 | AT2G32260 | 77.637 | 237 | 48 | 2 | 42 | 277 | 12 | 244 | 8.74e-135 | 382 |
MS.gene58686.t1 | AT2G38670 | 31.304 | 230 | 139 | 6 | 14 | 237 | 53 | 269 | 3.23e-28 | 112 |
MS.gene58686.t1 | AT2G38670 | 32.692 | 156 | 100 | 3 | 18 | 170 | 257 | 410 | 2.60e-17 | 81.6 |
Find 48 sgRNAs with CRISPR-Local
Find 298 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TAAGGCTATTGGAAAATTTA+AGG | 0.163999 | 2.3:+53323771 | MS.gene58686:CDS |
CTTATACAGGTTAAGGCTAT+TGG | 0.232230 | 2.3:+53323760 | MS.gene58686:intron |
TAGTTGAAATTACGATTTCT+TGG | 0.294974 | 2.3:-53320232 | None:intergenic |
CCAAACACATATCTCCTTGT+TGG | 0.358023 | 2.3:+53320708 | MS.gene58686:CDS |
CCAGTATGTAATGCGTAATC+TGG | 0.373754 | 2.3:+53323858 | MS.gene58686:CDS |
TTGATCACCCACGGCACATC+TGG | 0.375759 | 2.3:-53322108 | None:intergenic |
CTTGGCTTGTTCAAGAGAAC+GGG | 0.379292 | 2.3:-53320214 | None:intergenic |
CCAGATTACGCATTACATAC+TGG | 0.416241 | 2.3:-53323858 | None:intergenic |
CCATCAGCATAAACACGAAC+AGG | 0.422644 | 2.3:-53320162 | None:intergenic |
TGAAGAAGGATGCCACAAAA+TGG | 0.436374 | 2.3:+53324941 | MS.gene58686:CDS |
GGAACAGTGAGAAGAATTGC+TGG | 0.441857 | 2.3:+53324855 | MS.gene58686:CDS |
ATTTACGATCTCTTTCACTT+TGG | 0.443426 | 2.3:+53320186 | MS.gene58686:CDS |
AATGCAGATCGATTAGTTGC+TGG | 0.449023 | 2.3:+53324903 | MS.gene58686:CDS |
TGTGCCGTGGGTGATCAATC+AGG | 0.463633 | 2.3:+53322113 | MS.gene58686:CDS |
CCAACAAGGAGATATGTGTT+TGG | 0.467300 | 2.3:-53320708 | None:intergenic |
CCTGTTCGTGTTTATGCTGA+TGG | 0.469877 | 2.3:+53320162 | MS.gene58686:CDS |
ATCTCTTCTTTATGATGAGT+GGG | 0.482968 | 2.3:+53325149 | MS.gene58686:CDS |
GAACAAGATGACTCTGAAGT+TGG | 0.491101 | 2.3:+53320126 | MS.gene58686:CDS |
GCAAGAGACTGTAGGAAAGA+AGG | 0.492142 | 2.3:+53324119 | MS.gene58686:CDS |
TTTCTCGAGATGTTTGAAGA+AGG | 0.505057 | 2.3:+53324927 | MS.gene58686:CDS |
AATCTCTTCTTTATGATGAG+TGG | 0.507907 | 2.3:+53325148 | MS.gene58686:CDS |
TATGCTGATACAAGTGGAGC+TGG | 0.511409 | 2.3:+53323438 | MS.gene58686:CDS |
TCTTGGCTTGTTCAAGAGAA+CGG | 0.511606 | 2.3:-53320215 | None:intergenic |
CATAGTTATGCTGATACAAG+TGG | 0.557570 | 2.3:+53323432 | MS.gene58686:intron |
CTTGTTCAAGAGAACGGGCA+TGG | 0.557740 | 2.3:-53320209 | None:intergenic |
TGAGATCACACACAAGTACA+AGG | 0.560848 | 2.3:+53320743 | MS.gene58686:CDS |
GAAAAGATTGAGAATGAACA+TGG | 0.563205 | 2.3:+53324062 | MS.gene58686:CDS |
GGATCGTGGTTATTCAAGAA+AGG | 0.563355 | 2.3:+53323879 | MS.gene58686:CDS |
AAGGAAACAAAGAGGACTGA+AGG | 0.570979 | 2.3:+53323790 | MS.gene58686:CDS |
CTGGGATGAACCGTACTGAA+TGG | 0.573855 | 2.3:+53324874 | MS.gene58686:CDS |
TGGGATGAACCGTACTGAAT+GGG | 0.582067 | 2.3:+53324875 | MS.gene58686:CDS |
TATCATAATGAGAATCATCA+AGG | 0.585536 | 2.3:+53323828 | MS.gene58686:CDS |
AAGAAACAGCAAGAGACTGT+AGG | 0.592810 | 2.3:+53324111 | MS.gene58686:CDS |
AACTCCTGATTGATCACCCA+CGG | 0.598097 | 2.3:-53322117 | None:intergenic |
TGATACAAGTGGAGCTGGAA+AGG | 0.599993 | 2.3:+53323443 | MS.gene58686:CDS |
GCTAGGTGTTAGCTATGTCA+AGG | 0.608221 | 2.3:+53323903 | MS.gene58686:CDS |
CAAGCATAAAATTGACTATG+TGG | 0.611838 | 2.3:+53322146 | MS.gene58686:CDS |
GAAAATTTAAGGAAACAAAG+AGG | 0.614590 | 2.3:+53323782 | MS.gene58686:CDS |
CAGAATTCAAGAACAGCTGA+AGG | 0.615936 | 2.3:+53325113 | MS.gene58686:CDS |
AAGTTATTCCAGATGTGCCG+TGG | 0.618552 | 2.3:+53322100 | MS.gene58686:CDS |
GAACAGTGAGAAGAATTGCT+GGG | 0.618852 | 2.3:+53324856 | MS.gene58686:CDS |
CATCACTGCAGCATCCAACA+AGG | 0.622451 | 2.3:-53320722 | None:intergenic |
GGTTATTCAAGAAAGGAGCT+AGG | 0.624474 | 2.3:+53323886 | MS.gene58686:CDS |
AAAAGATTGAGAATGAACAT+GGG | 0.642829 | 2.3:+53324063 | MS.gene58686:CDS |
GATTCTCATTATGATATCAG+AGG | 0.655348 | 2.3:-53323821 | None:intergenic |
GTAATGCGTAATCTGGATCG+TGG | 0.679784 | 2.3:+53323865 | MS.gene58686:CDS |
GAGATCACACACAAGTACAA+GGG | 0.705592 | 2.3:+53320744 | MS.gene58686:CDS |
AGTTATTCCAGATGTGCCGT+GGG | 0.715400 | 2.3:+53322101 | MS.gene58686:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAAATAAACATAAAAAAG+AGG | - | chr2.3:53321425-53321444 | None:intergenic | 10.0% |
!! | ATAAATAAACATAAAAAAGA+GGG | - | chr2.3:53321424-53321443 | None:intergenic | 10.0% |
!! | AAAAGAAGAAAAAAAAAATG+GGG | - | chr2.3:53320375-53320394 | None:intergenic | 15.0% |
!! | AAAGTTTAAACAAATAAGAA+AGG | - | chr2.3:53323622-53323641 | None:intergenic | 15.0% |
!! | CAAAAGAAGAAAAAAAAAAT+GGG | - | chr2.3:53320376-53320395 | None:intergenic | 15.0% |
!! | GACTAAAAATCATAAAAAAA+GGG | - | chr2.3:53320349-53320368 | None:intergenic | 15.0% |
!! | GTAAATATAGTTTAATTGTT+TGG | + | chr2.3:53324251-53324270 | MS.gene58686:intron | 15.0% |
!! | TCATATACAACTAAATTAAA+AGG | - | chr2.3:53323505-53323524 | None:intergenic | 15.0% |
!! | TTAATTCCAGTAAAAAAATA+CGG | - | chr2.3:53322583-53322602 | None:intergenic | 15.0% |
!! | TTTATATGACTTATTTACAT+TGG | + | chr2.3:53321965-53321984 | MS.gene58686:intron | 15.0% |
!!! | AACAAAAGAAAACAAATTTT+TGG | - | chr2.3:53321907-53321926 | None:intergenic | 15.0% |
!!! | ATATAGTAAAGCTTATTTTT+AGG | - | chr2.3:53324985-53325004 | None:intergenic | 15.0% |
!!! | CATTTTTTTTTTCTTCTTTT+GGG | + | chr2.3:53320375-53320394 | MS.gene58686:intron | 15.0% |
!!! | CTTTTTCTTAAATTTACATA+AGG | - | chr2.3:53322874-53322893 | None:intergenic | 15.0% |
!!! | TATAGTAAAGCTTATTTTTA+GGG | - | chr2.3:53324984-53325003 | None:intergenic | 15.0% |
!!! | TCTTTTTTGTTTTGTTTTTA+AGG | + | chr2.3:53320497-53320516 | MS.gene58686:intron | 15.0% |
!!! | TGGTTTATTTTTTTTCTTTT+TGG | + | chr2.3:53320600-53320619 | MS.gene58686:intron | 15.0% |
!! | AAAAATGAAATTGAGAAAGA+TGG | - | chr2.3:53320313-53320332 | None:intergenic | 20.0% |
!! | AAAATGAAATTGAGAAAGAT+GGG | - | chr2.3:53320312-53320331 | None:intergenic | 20.0% |
!! | AACCTGTATAAGAAATTAAT+AGG | - | chr2.3:53323752-53323771 | None:intergenic | 20.0% |
!! | AACTAGATGAAATAACATAA+CGG | - | chr2.3:53321858-53321877 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAAATATAGC+TGG | - | chr2.3:53322209-53322228 | None:intergenic | 20.0% |
!! | ACTTTGTTGAAAATGTTATT+TGG | + | chr2.3:53322832-53322851 | MS.gene58686:intron | 20.0% |
!! | CCAAAAGAAGAAAAAAAAAA+TGG | - | chr2.3:53320377-53320396 | None:intergenic | 20.0% |
!! | GGACTAAAAATCATAAAAAA+AGG | - | chr2.3:53320350-53320369 | None:intergenic | 20.0% |
!! | TGAAAAAAAGAGAAATTTCA+AGG | - | chr2.3:53320286-53320305 | None:intergenic | 20.0% |
!! | TGAACTATCTTATTATAGAT+CGG | + | chr2.3:53324157-53324176 | MS.gene58686:intron | 20.0% |
!! | TTAATTTCTTATACAGGTTA+AGG | + | chr2.3:53323753-53323772 | MS.gene58686:intron | 20.0% |
!!! | AAGGGTATATATATGTATAT+GGG | + | chr2.3:53322981-53323000 | MS.gene58686:intron | 20.0% |
!!! | ATATTTTTAAGTGAATAGTG+TGG | + | chr2.3:53322780-53322799 | MS.gene58686:intron | 20.0% |
!!! | CCATTTTTTTTTTCTTCTTT+TGG | + | chr2.3:53320374-53320393 | MS.gene58686:intron | 20.0% |
!!! | CTATTATAGGTTTTACATTT+CGG | + | chr2.3:53321221-53321240 | MS.gene58686:intron | 20.0% |
!!! | GAAACAAGAAAACTTTTAAA+AGG | + | chr2.3:53322358-53322377 | MS.gene58686:intron | 20.0% |
!!! | GAAATTTTTCATGTTATAAC+AGG | - | chr2.3:53321494-53321513 | None:intergenic | 20.0% |
!!! | TATTTCATCTAGTTACATTT+TGG | + | chr2.3:53321864-53321883 | MS.gene58686:intron | 20.0% |
!!! | TTTTGTTTGTTGTGTTTTTA+AGG | + | chr2.3:53320470-53320489 | MS.gene58686:intron | 20.0% |
! | AAAAAATATCATGTGAGAAG+AGG | - | chr2.3:53322722-53322741 | None:intergenic | 25.0% |
! | AAAAAATTGAAGAGTTTGTG+CGG | + | chr2.3:53321050-53321069 | MS.gene58686:intron | 25.0% |
! | AAAAATATCATGTGAGAAGA+GGG | - | chr2.3:53322721-53322740 | None:intergenic | 25.0% |
! | AAAAGATTGAGAATGAACAT+GGG | + | chr2.3:53324063-53324082 | MS.gene58686:CDS | 25.0% |
! | AAAAGTAAACACGAGATTAT+AGG | + | chr2.3:53321645-53321664 | MS.gene58686:intron | 25.0% |
! | AAATATATAGTCAATCACGT+AGG | - | chr2.3:53322766-53322785 | None:intergenic | 25.0% |
! | AATGAAGCAAAATAAAAAGG+AGG | - | chr2.3:53320262-53320281 | None:intergenic | 25.0% |
! | AATGAATTACTAGGAAATGA+TGG | + | chr2.3:53324708-53324727 | MS.gene58686:intron | 25.0% |
! | ACTAGATGAAATAACATAAC+GGG | - | chr2.3:53321857-53321876 | None:intergenic | 25.0% |
! | ATAGTGTCTTAATAATGCAA+AGG | - | chr2.3:53324806-53324825 | None:intergenic | 25.0% |
! | ATATAAGAACTTTGTGGATA+TGG | - | chr2.3:53323372-53323391 | None:intergenic | 25.0% |
! | ATCATTTCCTAGTAATTCAT+TGG | - | chr2.3:53324709-53324728 | None:intergenic | 25.0% |
! | ATGAAGCAAAATAAAAAGGA+GGG | - | chr2.3:53320261-53320280 | None:intergenic | 25.0% |
! | ATTATGTCTGGTCAAAATAT+TGG | + | chr2.3:53321790-53321809 | MS.gene58686:intron | 25.0% |
! | CAAATGTCTATCAAAAAACA+TGG | - | chr2.3:53324647-53324666 | None:intergenic | 25.0% |
! | GAAAATTTAAGGAAACAAAG+AGG | + | chr2.3:53323782-53323801 | MS.gene58686:CDS | 25.0% |
! | GAGAATATATAAGAACTTTG+TGG | - | chr2.3:53323378-53323397 | None:intergenic | 25.0% |
! | GAGAATTTCTCATTCTATTT+AGG | - | chr2.3:53324466-53324485 | None:intergenic | 25.0% |
! | GATCTATAATAAGATAGTTC+AGG | - | chr2.3:53324158-53324177 | None:intergenic | 25.0% |
! | GGAAATGAAGCAAAATAAAA+AGG | - | chr2.3:53320265-53320284 | None:intergenic | 25.0% |
! | GTCATTTATTGAATGAGTAT+AGG | + | chr2.3:53323123-53323142 | MS.gene58686:intron | 25.0% |
! | TAAGGCTATTGGAAAATTTA+AGG | + | chr2.3:53323771-53323790 | MS.gene58686:CDS | 25.0% |
! | TAATAGATTGATGAAGTGAA+TGG | + | chr2.3:53321607-53321626 | MS.gene58686:intron | 25.0% |
! | TAATATAGTAGTAGTGATGA+TGG | - | chr2.3:53323257-53323276 | None:intergenic | 25.0% |
! | TAATCAAAGAGACAATTTGT+TGG | - | chr2.3:53323576-53323595 | None:intergenic | 25.0% |
! | TAGTTGAAATTACGATTTCT+TGG | - | chr2.3:53320235-53320254 | None:intergenic | 25.0% |
! | TATCATAATGAGAATCATCA+AGG | + | chr2.3:53323828-53323847 | MS.gene58686:CDS | 25.0% |
! | TCAGATGCCATATAAAAATA+TGG | - | chr2.3:53324528-53324547 | None:intergenic | 25.0% |
! | TCTATTTAGGTCATATTTCT+AGG | - | chr2.3:53324453-53324472 | None:intergenic | 25.0% |
! | TGCCTATTAATTTCTTATAC+AGG | + | chr2.3:53323747-53323766 | MS.gene58686:intron | 25.0% |
! | TTAGTAAACAGAAAATGAGA+AGG | - | chr2.3:53322021-53322040 | None:intergenic | 25.0% |
!! | ATACATGATCTCTTATTTGT+AGG | + | chr2.3:53324038-53324057 | MS.gene58686:intron | 25.0% |
!! | GAAGGGTATATATATGTATA+TGG | + | chr2.3:53322980-53322999 | MS.gene58686:intron | 25.0% |
!!! | CACATGTTTTGTTGTTTTTA+AGG | + | chr2.3:53320437-53320456 | MS.gene58686:intron | 25.0% |
!!! | CTTCTCACATGATATTTTTT+GGG | + | chr2.3:53322722-53322741 | MS.gene58686:intron | 25.0% |
!!! | GCGTAATCCATATTTTTATA+TGG | + | chr2.3:53324518-53324537 | MS.gene58686:intron | 25.0% |
!!! | TCTTCTCACATGATATTTTT+TGG | + | chr2.3:53322721-53322740 | MS.gene58686:intron | 25.0% |
!!! | TTACTAATTTGCTTTCACTA+TGG | + | chr2.3:53322034-53322053 | MS.gene58686:intron | 25.0% |
!!! | TTACTTCCGTATTTTTTTAC+TGG | + | chr2.3:53322574-53322593 | MS.gene58686:intron | 25.0% |
!!! | TTTTGTTGTTTGTCAATTGA+AGG | + | chr2.3:53320682-53320701 | MS.gene58686:intron | 25.0% |
!!! | TTTTTTTTCTTCTTTTGGGT+TGG | + | chr2.3:53320379-53320398 | MS.gene58686:intron | 25.0% |
AAAAATTGAAGAGTTTGTGC+GGG | + | chr2.3:53321051-53321070 | MS.gene58686:intron | 30.0% | |
AAAAGAGGGAAAAGAAAATC+TGG | - | chr2.3:53321410-53321429 | None:intergenic | 30.0% | |
AAATTTCATCCTAACCAGTA+AGG | + | chr2.3:53321507-53321526 | MS.gene58686:intron | 30.0% | |
AAGATCATAACAGAGGAAAT+AGG | - | chr2.3:53322467-53322486 | None:intergenic | 30.0% | |
AAGGATCATGTAGAATAATC+AGG | - | chr2.3:53324787-53324806 | None:intergenic | 30.0% | |
AAGTTTGATATCTGATGACA+TGG | + | chr2.3:53321468-53321487 | MS.gene58686:intron | 30.0% | |
AATAGGCATAAGATCATCAA+TGG | - | chr2.3:53323735-53323754 | None:intergenic | 30.0% | |
AATCTCTTCTTTATGATGAG+TGG | + | chr2.3:53325148-53325167 | MS.gene58686:CDS | 30.0% | |
AATTTCATCCTAACCAGTAA+GGG | + | chr2.3:53321508-53321527 | MS.gene58686:intron | 30.0% | |
ACAGAACAATGAAACACATA+TGG | - | chr2.3:53323964-53323983 | None:intergenic | 30.0% | |
ACTGCTATCTCAAAAACATA+GGG | - | chr2.3:53323009-53323028 | None:intergenic | 30.0% | |
AGGAAATAGGAGACAAAAAA+GGG | - | chr2.3:53322454-53322473 | None:intergenic | 30.0% | |
AGGTCTAATATACAGTACTT+TGG | - | chr2.3:53322001-53322020 | None:intergenic | 30.0% | |
AGTTATGTGCAAACTATTCA+TGG | + | chr2.3:53322892-53322911 | MS.gene58686:intron | 30.0% | |
ATCTCTTCTTTATGATGAGT+GGG | + | chr2.3:53325149-53325168 | MS.gene58686:CDS | 30.0% | |
ATTGAACACAAACTAGTGAT+AGG | - | chr2.3:53324302-53324321 | None:intergenic | 30.0% | |
ATTTACGATCTCTTTCACTT+TGG | + | chr2.3:53320186-53320205 | MS.gene58686:CDS | 30.0% | |
CAAACTCAGATAATTCTAAC+AGG | - | chr2.3:53324343-53324362 | None:intergenic | 30.0% | |
CAAGCATAAAATTGACTATG+TGG | + | chr2.3:53322146-53322165 | MS.gene58686:CDS | 30.0% | |
CAGAACAATGAAACACATAT+GGG | - | chr2.3:53323963-53323982 | None:intergenic | 30.0% | |
CATACTTCTATTCAATCTGT+GGG | + | chr2.3:53323312-53323331 | MS.gene58686:intron | 30.0% | |
CATTCTGTTTCCATCTTTAA+AGG | + | chr2.3:53321696-53321715 | MS.gene58686:intron | 30.0% | |
CTATGGTCATAAAATAACGA+AGG | - | chr2.3:53323417-53323436 | None:intergenic | 30.0% | |
CTGTCATTATGTATCAGAAT+AGG | + | chr2.3:53323675-53323694 | MS.gene58686:intron | 30.0% | |
CTTTAGTAGTCATTCAATTC+CGG | - | chr2.3:53322631-53322650 | None:intergenic | 30.0% | |
GAAAACAAAGATCATAACAG+AGG | - | chr2.3:53322474-53322493 | None:intergenic | 30.0% | |
GAAAAGATTGAGAATGAACA+TGG | + | chr2.3:53324062-53324081 | MS.gene58686:CDS | 30.0% | |
GAAGAAAAAAAAAATGGGGT+TGG | - | chr2.3:53320371-53320390 | None:intergenic | 30.0% | |
GAAGTATGATCAAACAACAA+AGG | - | chr2.3:53323300-53323319 | None:intergenic | 30.0% | |
GAGTCTATCTTATGTTATTC+TGG | + | chr2.3:53324546-53324565 | MS.gene58686:intron | 30.0% | |
GATTCTCATTATGATATCAG+AGG | - | chr2.3:53323824-53323843 | None:intergenic | 30.0% | |
TAAAGAATATGGTCGAGATT+TGG | + | chr2.3:53321257-53321276 | MS.gene58686:intron | 30.0% | |
TACTGCTATCTCAAAAACAT+AGG | - | chr2.3:53323010-53323029 | None:intergenic | 30.0% | |
TATCTTATTATAGATCGGCA+AGG | + | chr2.3:53324162-53324181 | MS.gene58686:intron | 30.0% | |
TCATACTTCTATTCAATCTG+TGG | + | chr2.3:53323311-53323330 | MS.gene58686:intron | 30.0% | |
TCATAGTAGCTTCTTAAGTT+AGG | + | chr2.3:53323101-53323120 | MS.gene58686:intron | 30.0% | |
TGCGAGAAAGTAAACAAATA+CGG | - | chr2.3:53323997-53324016 | None:intergenic | 30.0% | |
TGTTATATTGCCTCAGTAAA+GGG | + | chr2.3:53322922-53322941 | MS.gene58686:intron | 30.0% | |
TTCTGATTGACTGAATTTGT+TGG | + | chr2.3:53325057-53325076 | MS.gene58686:intron | 30.0% | |
! | AATTTGCTTTCACTATGGAT+TGG | + | chr2.3:53322039-53322058 | MS.gene58686:intron | 30.0% |
! | ATAACCACTCGTAAGATTTT+AGG | - | chr2.3:53321934-53321953 | None:intergenic | 30.0% |
! | ATACTCCAAATGTTCAGTTT+TGG | + | chr2.3:53324396-53324415 | MS.gene58686:intron | 30.0% |
! | ATGGAAGCTTGAAAATTTTG+AGG | - | chr2.3:53323716-53323735 | None:intergenic | 30.0% |
! | ATTTGGAGTATGAACAAATG+TGG | - | chr2.3:53324387-53324406 | None:intergenic | 30.0% |
! | GTAATTTTACCAACGAAGAA+AGG | - | chr2.3:53320842-53320861 | None:intergenic | 30.0% |
! | TACTCCAAATGTTCAGTTTT+GGG | + | chr2.3:53324397-53324416 | MS.gene58686:intron | 30.0% |
! | TCATCTAGTTACATTTTGGA+GGG | + | chr2.3:53321868-53321887 | MS.gene58686:intron | 30.0% |
! | TTATAGGTTTTACATTTCGG+CGG | + | chr2.3:53321224-53321243 | MS.gene58686:intron | 30.0% |
! | TTCATCTAGTTACATTTTGG+AGG | + | chr2.3:53321867-53321886 | MS.gene58686:intron | 30.0% |
! | TTCGTAATGTCAAAGTACTT+TGG | + | chr2.3:53321757-53321776 | MS.gene58686:intron | 30.0% |
! | TTTCTTTTTCCTTTCTTCGT+TGG | + | chr2.3:53320830-53320849 | MS.gene58686:intron | 30.0% |
! | TTTGGAGTATGAACAAATGT+GGG | - | chr2.3:53324386-53324405 | None:intergenic | 30.0% |
!! | AATAGTCAACAGAAGTATCA+TGG | - | chr2.3:53321579-53321598 | None:intergenic | 30.0% |
!!! | AGTAAAGCTTATTTTTAGGG+AGG | - | chr2.3:53324981-53325000 | None:intergenic | 30.0% |
!!! | ATGATCTTTGTTTTCTGGTT+TGG | + | chr2.3:53322479-53322498 | MS.gene58686:intron | 30.0% |
!!! | CTGTTATGATCTTTGTTTTC+TGG | + | chr2.3:53322474-53322493 | MS.gene58686:intron | 30.0% |
!!! | TGTTTTTGAGATAGCAGTAT+TGG | + | chr2.3:53323011-53323030 | MS.gene58686:intron | 30.0% |
AAAGAGAAATATAGCTGGAC+TGG | - | chr2.3:53322204-53322223 | None:intergenic | 35.0% | |
AAATGTGAGTGCAGTATTAG+AGG | - | chr2.3:53324577-53324596 | None:intergenic | 35.0% | |
AACTCCTAAAATCTTACGAG+TGG | + | chr2.3:53321927-53321946 | MS.gene58686:intron | 35.0% | |
AAGAGAAATATAGCTGGACT+GGG | - | chr2.3:53322203-53322222 | None:intergenic | 35.0% | |
AATTGTTTGGATGCGTTTCT+TGG | + | chr2.3:53324264-53324283 | MS.gene58686:intron | 35.0% | |
ACAAATGTGGGTGAAATAAC+AGG | - | chr2.3:53324374-53324393 | None:intergenic | 35.0% | |
AGTTCAGATGTGGCTATTAT+AGG | + | chr2.3:53321208-53321227 | MS.gene58686:intron | 35.0% | |
ATTGTTTGGATGCGTTTCTT+GGG | + | chr2.3:53324265-53324284 | MS.gene58686:intron | 35.0% | |
ATTTCATCCTAACCAGTAAG+GGG | + | chr2.3:53321509-53321528 | MS.gene58686:intron | 35.0% | |
CAAAAAAGGGGAAACAGAAA+AGG | - | chr2.3:53322441-53322460 | None:intergenic | 35.0% | |
CAAACCCAAAACTGAACATT+TGG | - | chr2.3:53324404-53324423 | None:intergenic | 35.0% | |
CAAATGTGGGTGAAATAACA+GGG | - | chr2.3:53324373-53324392 | None:intergenic | 35.0% | |
CACTTGTATCAGCATAACTA+TGG | - | chr2.3:53323434-53323453 | None:intergenic | 35.0% | |
CATAGTTATGCTGATACAAG+TGG | + | chr2.3:53323432-53323451 | MS.gene58686:intron | 35.0% | |
CTGTTATATTGCCTCAGTAA+AGG | + | chr2.3:53322921-53322940 | MS.gene58686:intron | 35.0% | |
CTTATACAGGTTAAGGCTAT+TGG | + | chr2.3:53323760-53323779 | MS.gene58686:intron | 35.0% | |
GAGGAAATAGGAGACAAAAA+AGG | - | chr2.3:53322455-53322474 | None:intergenic | 35.0% | |
GGAAATAGGAGACAAAAAAG+GGG | - | chr2.3:53322453-53322472 | None:intergenic | 35.0% | |
GTGTGGGAGAATAAAGAATA+TGG | + | chr2.3:53321246-53321265 | MS.gene58686:intron | 35.0% | |
GTTATATTGCCTCAGTAAAG+GGG | + | chr2.3:53322923-53322942 | MS.gene58686:intron | 35.0% | |
TACTTCAAGAACCTTAAAGC+CGG | + | chr2.3:53322609-53322628 | MS.gene58686:intron | 35.0% | |
TAGTAGACAGTAGATGTATC+AGG | + | chr2.3:53320931-53320950 | MS.gene58686:intron | 35.0% | |
TATCCCCGTTTAATTGCTTA+CGG | + | chr2.3:53321819-53321838 | MS.gene58686:intron | 35.0% | |
TCCTCAGTATATTTCTTGTC+TGG | + | chr2.3:53323650-53323669 | MS.gene58686:intron | 35.0% | |
TGTCAAACTCTGTTCTTCAT+AGG | + | chr2.3:53323041-53323060 | MS.gene58686:intron | 35.0% | |
TTATATTGCCTCAGTAAAGG+GGG | + | chr2.3:53322924-53322943 | MS.gene58686:intron | 35.0% | |
TTATCAGCGTTCTAACTTTG+TGG | + | chr2.3:53322229-53322248 | MS.gene58686:intron | 35.0% | |
TTTCTCGAGATGTTTGAAGA+AGG | + | chr2.3:53324927-53324946 | MS.gene58686:CDS | 35.0% | |
! | CATTTTCAACCCATTCAGTA+CGG | - | chr2.3:53324887-53324906 | None:intergenic | 35.0% |
! | GATAACTCTCGACTTGAATT+TGG | + | chr2.3:53323063-53323082 | MS.gene58686:intron | 35.0% |
! | GTTGGTTTACTGATATACCA+GGG | + | chr2.3:53325075-53325094 | MS.gene58686:intron | 35.0% |
! | TGGCATGTTGAATTTTGCTA+TGG | + | chr2.3:53320580-53320599 | MS.gene58686:intron | 35.0% |
!! | GTCATATTTCTAGGCAATGT+GGG | - | chr2.3:53324444-53324463 | None:intergenic | 35.0% |
!! | TGTTGGTTTACTGATATACC+AGG | + | chr2.3:53325074-53325093 | MS.gene58686:intron | 35.0% |
!!! | AATGGTTTTTTGCGGTTCAA+TGG | + | chr2.3:53321111-53321130 | MS.gene58686:intron | 35.0% |
!!! | TTTTCTTCTTTTGGGTTGGT+TGG | + | chr2.3:53320383-53320402 | MS.gene58686:intron | 35.0% |
AAGCCAAACTATGTGCAGAT+AGG | + | chr2.3:53324834-53324853 | MS.gene58686:intron | 40.0% | |
AAGGAAACAAAGAGGACTGA+AGG | + | chr2.3:53323790-53323809 | MS.gene58686:CDS | 40.0% | |
ACACTCAAGACTGTAACATC+CGG | - | chr2.3:53324678-53324697 | None:intergenic | 40.0% | |
ACAGCCGTAAGCAATTAAAC+GGG | - | chr2.3:53321826-53321845 | None:intergenic | 40.0% | |
ACGTGATTTCATGTTTGCAG+TGG | + | chr2.3:53320560-53320579 | MS.gene58686:intron | 40.0% | |
ACTGCACAGTGGTTCAATAA+TGG | + | chr2.3:53321151-53321170 | MS.gene58686:intron | 40.0% | |
ATAGACATTTGCCTACGTTC+CGG | + | chr2.3:53324656-53324675 | MS.gene58686:intron | 40.0% | |
ATAGCTCTTGGAGTTGAGTT+AGG | + | chr2.3:53324496-53324515 | MS.gene58686:intron | 40.0% | |
ATGTCCTGTGGTAAGCATTA+AGG | + | chr2.3:53324610-53324629 | MS.gene58686:intron | 40.0% | |
ATGTTACAGTCTTGAGTGTG+CGG | + | chr2.3:53324679-53324698 | MS.gene58686:intron | 40.0% | |
ATTATTGAACCACTGTGCAG+TGG | - | chr2.3:53321152-53321171 | None:intergenic | 40.0% | |
CACAGCCGTAAGCAATTAAA+CGG | - | chr2.3:53321827-53321846 | None:intergenic | 40.0% | |
CACAGTGGTTCAATAATGGT+TGG | + | chr2.3:53321155-53321174 | MS.gene58686:intron | 40.0% | |
CAGAATTCAAGAACAGCTGA+AGG | + | chr2.3:53325113-53325132 | MS.gene58686:CDS | 40.0% | |
CATATGGGTAAGCAAAACAG+AGG | - | chr2.3:53323948-53323967 | None:intergenic | 40.0% | |
CATGGGACTTAAAAAGTTGC+AGG | + | chr2.3:53324080-53324099 | MS.gene58686:CDS | 40.0% | |
CCAAACACATATCTCCTTGT+TGG | + | chr2.3:53320708-53320727 | MS.gene58686:CDS | 40.0% | |
CCAACAAGGAGATATGTGTT+TGG | - | chr2.3:53320711-53320730 | None:intergenic | 40.0% | |
CCAGATTACGCATTACATAC+TGG | - | chr2.3:53323861-53323880 | None:intergenic | 40.0% | |
CCAGTATGTAATGCGTAATC+TGG | + | chr2.3:53323858-53323877 | MS.gene58686:CDS | 40.0% | |
GAACAGTGAGAAGAATTGCT+GGG | + | chr2.3:53324856-53324875 | MS.gene58686:CDS | 40.0% | |
GAGATCACACACAAGTACAA+GGG | + | chr2.3:53320744-53320763 | MS.gene58686:CDS | 40.0% | |
GATGAAGTGAATGGTGAGAT+TGG | + | chr2.3:53321616-53321635 | MS.gene58686:intron | 40.0% | |
GATTGCTTCTAGTGGTGAAT+AGG | + | chr2.3:53321297-53321316 | MS.gene58686:intron | 40.0% | |
GCCAGACAAGAAATATACTG+AGG | - | chr2.3:53323654-53323673 | None:intergenic | 40.0% | |
GGATCGTGGTTATTCAAGAA+AGG | + | chr2.3:53323879-53323898 | MS.gene58686:CDS | 40.0% | |
GGGAAAAGAAAATCTGGCAT+AGG | - | chr2.3:53321404-53321423 | None:intergenic | 40.0% | |
GGTTATTCAAGAAAGGAGCT+AGG | + | chr2.3:53323886-53323905 | MS.gene58686:CDS | 40.0% | |
GTCATTCAATTCCGGCTTTA+AGG | - | chr2.3:53322623-53322642 | None:intergenic | 40.0% | |
GTTCCTATCTGCACATAGTT+TGG | - | chr2.3:53324840-53324859 | None:intergenic | 40.0% | |
TACTGCCTGCTATCATTACT+TGG | - | chr2.3:53321078-53321097 | None:intergenic | 40.0% | |
TCAAGAAGAAGCAAGCTTCA+GGG | - | chr2.3:53321374-53321393 | None:intergenic | 40.0% | |
TGAAGAAGGATGCCACAAAA+TGG | + | chr2.3:53324941-53324960 | MS.gene58686:CDS | 40.0% | |
TGAGATCACACACAAGTACA+AGG | + | chr2.3:53320743-53320762 | MS.gene58686:CDS | 40.0% | |
TGTCACTGTAGTTGTGTATG+AGG | - | chr2.3:53322307-53322326 | None:intergenic | 40.0% | |
TTAAGATGAATGCCACCAGA+TGG | - | chr2.3:53323548-53323567 | None:intergenic | 40.0% | |
TTTCATCCTAACCAGTAAGG+GGG | + | chr2.3:53321510-53321529 | MS.gene58686:intron | 40.0% | |
! | AAATATAGCTGGACTGGGAT+TGG | - | chr2.3:53322198-53322217 | None:intergenic | 40.0% |
! | AATGCAGATCGATTAGTTGC+TGG | + | chr2.3:53324903-53324922 | MS.gene58686:CDS | 40.0% |
! | AGAGAGATCCAACCATTTTG+TGG | - | chr2.3:53324956-53324975 | None:intergenic | 40.0% |
! | ATAAAACCCCCTTACTGGTT+AGG | - | chr2.3:53321519-53321538 | None:intergenic | 40.0% |
! | ATCTTTAAAGGCCGTGTTTG+CGG | + | chr2.3:53321708-53321727 | MS.gene58686:intron | 40.0% |
! | CGTGATGACGTCTATGATAA+CGG | - | chr2.3:53321545-53321564 | None:intergenic | 40.0% |
! | TAGTTGATTCCACAAGCTCA+CGG | - | chr2.3:53321013-53321032 | None:intergenic | 40.0% |
! | TCTAGCTTCAAGTTCAGATG+TGG | + | chr2.3:53321198-53321217 | MS.gene58686:intron | 40.0% |
! | TGGTTCAATAATGGTTGGTG+CGG | + | chr2.3:53321160-53321179 | MS.gene58686:intron | 40.0% |
!! | ACTGGGATTGGTTGATCTTA+CGG | - | chr2.3:53322186-53322205 | None:intergenic | 40.0% |
!! | GAACAAGATGACTCTGAAGT+TGG | + | chr2.3:53320126-53320145 | MS.gene58686:CDS | 40.0% |
!! | GGTCATATTTCTAGGCAATG+TGG | - | chr2.3:53324445-53324464 | None:intergenic | 40.0% |
!! | TCTTGGCTTGTTCAAGAGAA+CGG | - | chr2.3:53320218-53320237 | None:intergenic | 40.0% |
!!! | GTTCAGTTTTGGGTTTGAGA+GGG | + | chr2.3:53324407-53324426 | MS.gene58686:intron | 40.0% |
!!! | TGCGGGTTAATGGTTTTTTG+CGG | + | chr2.3:53321103-53321122 | MS.gene58686:intron | 40.0% |
!!! | TGTTCAGTTTTGGGTTTGAG+AGG | + | chr2.3:53324406-53324425 | MS.gene58686:intron | 40.0% |
!!! | TGTTTTTTCTTCCCACCATC+TGG | + | chr2.3:53323530-53323549 | MS.gene58686:intron | 40.0% |
!!! | TTTGGGTTGGTTGGTTTTCA+TGG | + | chr2.3:53320392-53320411 | MS.gene58686:intron | 40.0% |
AACTCCTGATTGATCACCCA+CGG | - | chr2.3:53322120-53322139 | None:intergenic | 45.0% | |
AAGTTATTCCAGATGTGCCG+TGG | + | chr2.3:53322100-53322119 | MS.gene58686:CDS | 45.0% | |
ACTCCAAGAGCTATCTCACA+AGG | - | chr2.3:53324490-53324509 | None:intergenic | 45.0% | |
AGTTATTCCAGATGTGCCGT+GGG | + | chr2.3:53322101-53322120 | MS.gene58686:CDS | 45.0% | |
CACACCTTAATGCTTACCAC+AGG | - | chr2.3:53324617-53324636 | None:intergenic | 45.0% | |
CAGCCGTAAGCAATTAAACG+GGG | - | chr2.3:53321825-53321844 | None:intergenic | 45.0% | |
CCATCAGCATAAACACGAAC+AGG | - | chr2.3:53320165-53320184 | None:intergenic | 45.0% | |
CCTGTTCGTGTTTATGCTGA+TGG | + | chr2.3:53320162-53320181 | MS.gene58686:CDS | 45.0% | |
CGGCAGACCAATGAATTACT+AGG | + | chr2.3:53324699-53324718 | MS.gene58686:intron | 45.0% | |
CGTTTAATTGCTTACGGCTG+TGG | + | chr2.3:53321825-53321844 | MS.gene58686:intron | 45.0% | |
CTCAAGAAGAAGCAAGCTTC+AGG | - | chr2.3:53321375-53321394 | None:intergenic | 45.0% | |
CTTCTAGTGGTGAATAGGCT+AGG | + | chr2.3:53321302-53321321 | MS.gene58686:intron | 45.0% | |
GAAGGATGCCACAAAATGGT+TGG | + | chr2.3:53324945-53324964 | MS.gene58686:intron | 45.0% | |
GATGGCATGATTGCTTCTAG+TGG | + | chr2.3:53321289-53321308 | MS.gene58686:intron | 45.0% | |
GCGTTATCCTTTGGTAAAGG+AGG | + | chr2.3:53322946-53322965 | MS.gene58686:intron | 45.0% | |
GCTAGGTGTTAGCTATGTCA+AGG | + | chr2.3:53323903-53323922 | MS.gene58686:CDS | 45.0% | |
GGAACAGTGAGAAGAATTGC+TGG | + | chr2.3:53324855-53324874 | MS.gene58686:CDS | 45.0% | |
GGAGAATAAAACCCCCTTAC+TGG | - | chr2.3:53321524-53321543 | None:intergenic | 45.0% | |
GGCGTCTTTCTGATTATGTC+TGG | + | chr2.3:53321778-53321797 | MS.gene58686:intron | 45.0% | |
GTAATGCGTAATCTGGATCG+TGG | + | chr2.3:53323865-53323884 | MS.gene58686:CDS | 45.0% | |
TAGGTGCGATGGCAATGAAA+TGG | + | chr2.3:53321321-53321340 | MS.gene58686:intron | 45.0% | |
TATGCTGATACAAGTGGAGC+TGG | + | chr2.3:53323438-53323457 | MS.gene58686:CDS | 45.0% | |
TCACCTTGTGAGATAGCTCT+TGG | + | chr2.3:53324484-53324503 | MS.gene58686:intron | 45.0% | |
TCCTTTGGTAAAGGAGGATG+CGG | + | chr2.3:53322952-53322971 | MS.gene58686:intron | 45.0% | |
TGATACAAGTGGAGCTGGAA+AGG | + | chr2.3:53323443-53323462 | MS.gene58686:CDS | 45.0% | |
TGGGATGAACCGTACTGAAT+GGG | + | chr2.3:53324875-53324894 | MS.gene58686:CDS | 45.0% | |
TGTGCAAACTATTCATGGCG+AGG | + | chr2.3:53322897-53322916 | MS.gene58686:intron | 45.0% | |
TTACTTTCTCGCATGCTGAG+AGG | + | chr2.3:53324004-53324023 | MS.gene58686:intron | 45.0% | |
! | ATAGCAGGCAGTAGTTTGTG+CGG | + | chr2.3:53321085-53321104 | MS.gene58686:intron | 45.0% |
! | CAGTAGTTTGTGCGGGTTAA+TGG | + | chr2.3:53321093-53321112 | MS.gene58686:intron | 45.0% |
! | CTTTTCTTTCCGTGAGCTTG+TGG | + | chr2.3:53321001-53321020 | MS.gene58686:intron | 45.0% |
! | GCAAACACGGCCTTTAAAGA+TGG | - | chr2.3:53321709-53321728 | None:intergenic | 45.0% |
! | GTTTTACATTTCGGCGGTGT+GGG | + | chr2.3:53321230-53321249 | MS.gene58686:intron | 45.0% |
! | TTCAATAATGGTTGGTGCGG+TGG | + | chr2.3:53321163-53321182 | MS.gene58686:intron | 45.0% |
! | TTCATGCTCTAGATGTCCTG+TGG | + | chr2.3:53324598-53324617 | MS.gene58686:intron | 45.0% |
! | TTTTTCTTCCCACCATCTGG+TGG | + | chr2.3:53323533-53323552 | MS.gene58686:intron | 45.0% |
!! | CTTGGCTTGTTCAAGAGAAC+GGG | - | chr2.3:53320217-53320236 | None:intergenic | 45.0% |
!! | GAGATTTGGTGCTTCAACGA+TGG | + | chr2.3:53321271-53321290 | MS.gene58686:intron | 45.0% |
!! | CTATTAATAAAAAATATTAT+TGG | - | chr2.3:53324198-53324217 | None:intergenic | 5.0% |
AATTGCTTACGGCTGTGGAG+TGG | + | chr2.3:53321830-53321849 | MS.gene58686:intron | 50.0% | |
ACCGCATCCTCCTTTACCAA+AGG | - | chr2.3:53322956-53322975 | None:intergenic | 50.0% | |
AGATGAATGCCACCAGATGG+TGG | - | chr2.3:53323545-53323564 | None:intergenic | 50.0% | |
ATTGCTTACGGCTGTGGAGT+GGG | + | chr2.3:53321831-53321850 | MS.gene58686:intron | 50.0% | |
CATCACTGCAGCATCCAACA+AGG | - | chr2.3:53320725-53320744 | None:intergenic | 50.0% | |
CGGGTCCAAGTAATGATAGC+AGG | + | chr2.3:53321070-53321089 | MS.gene58686:intron | 50.0% | |
CTGGGATGAACCGTACTGAA+TGG | + | chr2.3:53324874-53324893 | MS.gene58686:CDS | 50.0% | |
CTTGTTCAAGAGAACGGGCA+TGG | - | chr2.3:53320212-53320231 | None:intergenic | 50.0% | |
GACTGTAACATCCGGAACGT+AGG | - | chr2.3:53324670-53324689 | None:intergenic | 50.0% | |
GATGAATGCCACCAGATGGT+GGG | - | chr2.3:53323544-53323563 | None:intergenic | 50.0% | |
GGTAAAGGAGGATGCGGTAA+GGG | + | chr2.3:53322958-53322977 | MS.gene58686:intron | 50.0% | |
GGTAAGCAAAACAGAGGAGC+TGG | - | chr2.3:53323942-53323961 | None:intergenic | 50.0% | |
TGGTAAAGGAGGATGCGGTA+AGG | + | chr2.3:53322957-53322976 | MS.gene58686:intron | 50.0% | |
TGTGTGTGTATGTGCACGTG+CGG | - | chr2.3:53322531-53322550 | None:intergenic | 50.0% | |
! | AGTTCAATCGCACTTGCTGC+AGG | + | chr2.3:53322067-53322086 | MS.gene58686:intron | 50.0% |
! | GACAGTTTTCCACTGCACAG+TGG | + | chr2.3:53321140-53321159 | MS.gene58686:intron | 50.0% |
! | GGGGCGTTATCCTTTGGTAA+AGG | + | chr2.3:53322943-53322962 | MS.gene58686:intron | 50.0% |
! | GGTTTTACATTTCGGCGGTG+TGG | + | chr2.3:53321229-53321248 | MS.gene58686:intron | 50.0% |
! | TAGCAGGCAGTAGTTTGTGC+GGG | + | chr2.3:53321086-53321105 | MS.gene58686:intron | 50.0% |
! | TGTCTCTGATTGCTGTTCCC+TGG | - | chr2.3:53325095-53325114 | None:intergenic | 50.0% |
!! | GTAAAGGGGGCGTTATCCTT+TGG | + | chr2.3:53322937-53322956 | MS.gene58686:intron | 50.0% |
AAGGAGGATGCGGTAAGGGA+AGG | + | chr2.3:53322962-53322981 | MS.gene58686:intron | 55.0% | |
AGGAGGATGCGGTAAGGGAA+GGG | + | chr2.3:53322963-53322982 | MS.gene58686:intron | 55.0% | |
AGGCCGTGTTTGCGGATAAC+TGG | + | chr2.3:53321716-53321735 | MS.gene58686:intron | 55.0% | |
CAGGGCTCTCGAAGACAACA+AGG | - | chr2.3:53321356-53321375 | None:intergenic | 55.0% | |
CCGCCAGTTATCCGCAAACA+CGG | - | chr2.3:53321722-53321741 | None:intergenic | 55.0% | |
CCGTGTTTGCGGATAACTGG+CGG | + | chr2.3:53321719-53321738 | MS.gene58686:intron | 55.0% | |
GGATAACGCCCCCTTTACTG+AGG | - | chr2.3:53322935-53322954 | None:intergenic | 55.0% | |
GGTGAATAGGCTAGGTGCGA+TGG | + | chr2.3:53321310-53321329 | MS.gene58686:intron | 55.0% | |
TGTGCCGTGGGTGATCAATC+AGG | + | chr2.3:53322113-53322132 | MS.gene58686:CDS | 55.0% | |
TTGATCACCCACGGCACATC+TGG | - | chr2.3:53322111-53322130 | None:intergenic | 55.0% | |
! | CAATCGCACTTGCTGCAGGT+GGG | + | chr2.3:53322071-53322090 | MS.gene58686:intron | 55.0% |
! | TCAATCGCACTTGCTGCAGG+TGG | + | chr2.3:53322070-53322089 | MS.gene58686:intron | 55.0% |
! | TGGTTGGTGCGGTGGATCTG+TGG | + | chr2.3:53321171-53321190 | MS.gene58686:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 53320120 | 53325230 | 53320120 | ID=MS.gene58686 |
chr2.3 | mRNA | 53320120 | 53325230 | 53320120 | ID=MS.gene58686.t1;Parent=MS.gene58686 |
chr2.3 | exon | 53320120 | 53320241 | 53320120 | ID=MS.gene58686.t1.exon1;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53320120 | 53320241 | 53320120 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53320704 | 53320817 | 53320704 | ID=MS.gene58686.t1.exon2;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53320704 | 53320817 | 53320704 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53322089 | 53322184 | 53322089 | ID=MS.gene58686.t1.exon3;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53322089 | 53322184 | 53322089 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53323437 | 53323479 | 53323437 | ID=MS.gene58686.t1.exon4;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53323437 | 53323479 | 53323437 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53323769 | 53323924 | 53323769 | ID=MS.gene58686.t1.exon5;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53323769 | 53323924 | 53323769 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53324060 | 53324140 | 53324060 | ID=MS.gene58686.t1.exon6;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53324060 | 53324140 | 53324060 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53324852 | 53324962 | 53324852 | ID=MS.gene58686.t1.exon7;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53324852 | 53324962 | 53324852 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
chr2.3 | exon | 53325096 | 53325230 | 53325096 | ID=MS.gene58686.t1.exon8;Parent=MS.gene58686.t1 |
chr2.3 | CDS | 53325096 | 53325230 | 53325096 | ID=cds.MS.gene58686.t1;Parent=MS.gene58686.t1 |
Gene Sequence |
Protein sequence |