Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78492.t1 | XP_013463891.1 | 97.1 | 726 | 20 | 1 | 1 | 726 | 1 | 725 | 0.00E+00 | 1198.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78492.t1 | F4IRM4 | 51.6 | 717 | 313 | 8 | 28 | 726 | 40 | 740 | 2.2e-190 | 667.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78492.t1 | A0A072V8J2 | 97.1 | 726 | 20 | 1 | 1 | 726 | 1 | 725 | 0.0e+00 | 1198.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene78492 | 0.807262 | 5.51E-50 | -1.69E-46 |
| MS.gene049151 | MS.gene78492 | 0.805301 | 1.43E-49 | -1.69E-46 |
| MS.gene049159 | MS.gene78492 | 0.865009 | 8.06E-65 | -1.69E-46 |
| MS.gene049435 | MS.gene78492 | 0.836008 | 1.20E-56 | -1.69E-46 |
| MS.gene049452 | MS.gene78492 | 0.801051 | 1.08E-48 | -1.69E-46 |
| MS.gene049501 | MS.gene78492 | 0.8011 | 1.06E-48 | -1.69E-46 |
| MS.gene050226 | MS.gene78492 | 0.850646 | 1.48E-60 | -1.69E-46 |
| MS.gene050227 | MS.gene78492 | 0.849404 | 3.30E-60 | -1.69E-46 |
| MS.gene050228 | MS.gene78492 | 0.84494 | 5.54E-59 | -1.69E-46 |
| MS.gene050442 | MS.gene78492 | 0.844339 | 8.04E-59 | -1.69E-46 |
| MS.gene050623 | MS.gene78492 | -0.82531 | 5.02E-54 | -1.69E-46 |
| MS.gene050680 | MS.gene78492 | 0.800592 | 1.34E-48 | -1.69E-46 |
| MS.gene050719 | MS.gene78492 | 0.833119 | 6.40E-56 | -1.69E-46 |
| MS.gene050721 | MS.gene78492 | 0.832048 | 1.18E-55 | -1.69E-46 |
| MS.gene050724 | MS.gene78492 | 0.841981 | 3.42E-58 | -1.69E-46 |
| MS.gene050762 | MS.gene78492 | 0.813016 | 3.17E-51 | -1.69E-46 |
| MS.gene050763 | MS.gene78492 | 0.814571 | 1.44E-51 | -1.69E-46 |
| MS.gene050780 | MS.gene78492 | 0.819848 | 9.36E-53 | -1.69E-46 |
| MS.gene050815 | MS.gene78492 | 0.829019 | 6.51E-55 | -1.69E-46 |
| MS.gene050826 | MS.gene78492 | 0.808596 | 2.87E-50 | -1.69E-46 |
| MS.gene050844 | MS.gene78492 | 0.818534 | 1.86E-52 | -1.69E-46 |
| MS.gene051180 | MS.gene78492 | 0.803532 | 3.33E-49 | -1.69E-46 |
| MS.gene051198 | MS.gene78492 | 0.814687 | 1.36E-51 | -1.69E-46 |
| MS.gene051210 | MS.gene78492 | 0.828675 | 7.88E-55 | -1.69E-46 |
| MS.gene051344 | MS.gene78492 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene78492 | 0.805532 | 1.28E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene78492 | 0.862057 | 6.63E-64 | -1.69E-46 |
| MS.gene052020 | MS.gene78492 | 0.836427 | 9.42E-57 | -1.69E-46 |
| MS.gene05215 | MS.gene78492 | 0.802517 | 5.40E-49 | -1.69E-46 |
| MS.gene052323 | MS.gene78492 | 0.844173 | 8.90E-59 | -1.69E-46 |
| MS.gene052384 | MS.gene78492 | 0.808002 | 3.84E-50 | -1.69E-46 |
| MS.gene052426 | MS.gene78492 | 0.812759 | 3.61E-51 | -1.69E-46 |
| MS.gene052519 | MS.gene78492 | 0.80215 | 6.43E-49 | -1.69E-46 |
| MS.gene052611 | MS.gene78492 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene052773 | MS.gene78492 | 0.800392 | 1.47E-48 | -1.69E-46 |
| MS.gene052863 | MS.gene78492 | 0.843196 | 1.63E-58 | -1.69E-46 |
| MS.gene05288 | MS.gene78492 | 0.802994 | 4.31E-49 | -1.69E-46 |
| MS.gene052896 | MS.gene78492 | 0.852048 | 5.96E-61 | -1.69E-46 |
| MS.gene05289 | MS.gene78492 | 0.800554 | 1.36E-48 | -1.69E-46 |
| MS.gene053008 | MS.gene78492 | 0.853083 | 3.02E-61 | -1.69E-46 |
| MS.gene053216 | MS.gene78492 | 0.804185 | 2.44E-49 | -1.69E-46 |
| MS.gene053226 | MS.gene78492 | 0.806192 | 9.27E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene78492 | 0.803102 | 4.09E-49 | -1.69E-46 |
| MS.gene054236 | MS.gene78492 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene054379 | MS.gene78492 | 0.832152 | 1.11E-55 | -1.69E-46 |
| MS.gene054467 | MS.gene78492 | 0.80981 | 1.57E-50 | -1.69E-46 |
| MS.gene054472 | MS.gene78492 | 0.828956 | 6.74E-55 | -1.69E-46 |
| MS.gene05462 | MS.gene78492 | 0.817042 | 4.05E-52 | -1.69E-46 |
| MS.gene054657 | MS.gene78492 | 0.810727 | 9.98E-51 | -1.69E-46 |
| MS.gene054658 | MS.gene78492 | 0.832612 | 8.56E-56 | -1.69E-46 |
| MS.gene054994 | MS.gene78492 | 0.809689 | 1.67E-50 | -1.69E-46 |
| MS.gene05510 | MS.gene78492 | 0.853122 | 2.94E-61 | -1.69E-46 |
| MS.gene05517 | MS.gene78492 | 0.801859 | 7.38E-49 | -1.69E-46 |
| MS.gene055222 | MS.gene78492 | 0.803226 | 3.86E-49 | -1.69E-46 |
| MS.gene055363 | MS.gene78492 | 0.824238 | 9.00E-54 | -1.69E-46 |
| MS.gene055623 | MS.gene78492 | 0.812661 | 3.79E-51 | -1.69E-46 |
| MS.gene055701 | MS.gene78492 | 0.826147 | 3.18E-54 | -1.69E-46 |
| MS.gene055818 | MS.gene78492 | 0.851607 | 7.95E-61 | -1.69E-46 |
| MS.gene055926 | MS.gene78492 | 0.837239 | 5.85E-57 | -1.69E-46 |
| MS.gene056173 | MS.gene78492 | 0.833917 | 4.05E-56 | -1.69E-46 |
| MS.gene056506 | MS.gene78492 | 0.811691 | 6.17E-51 | -1.69E-46 |
| MS.gene056552 | MS.gene78492 | 0.809884 | 1.52E-50 | -1.69E-46 |
| MS.gene056760 | MS.gene78492 | 0.812285 | 4.58E-51 | -1.69E-46 |
| MS.gene056875 | MS.gene78492 | 0.803143 | 4.01E-49 | -1.69E-46 |
| MS.gene057394 | MS.gene78492 | 0.809136 | 2.20E-50 | -1.69E-46 |
| MS.gene05761 | MS.gene78492 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene057693 | MS.gene78492 | 0.804472 | 2.13E-49 | -1.69E-46 |
| MS.gene057750 | MS.gene78492 | 0.813551 | 2.42E-51 | -1.69E-46 |
| MS.gene057869 | MS.gene78492 | 0.851479 | 8.64E-61 | -1.69E-46 |
| MS.gene057915 | MS.gene78492 | 0.847181 | 1.36E-59 | -1.69E-46 |
| MS.gene058010 | MS.gene78492 | 0.820988 | 5.13E-53 | -1.69E-46 |
| MS.gene058146 | MS.gene78492 | 0.834552 | 2.81E-56 | -1.69E-46 |
| MS.gene058168 | MS.gene78492 | 0.808075 | 3.70E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene78492 | 0.83234 | 1.00E-55 | -1.69E-46 |
| MS.gene058548 | MS.gene78492 | 0.816055 | 6.74E-52 | -1.69E-46 |
| MS.gene058595 | MS.gene78492 | 0.820415 | 6.94E-53 | -1.69E-46 |
| MS.gene058636 | MS.gene78492 | 0.804665 | 1.94E-49 | -1.69E-46 |
| MS.gene058979 | MS.gene78492 | 0.811299 | 7.50E-51 | -1.69E-46 |
| MS.gene058982 | MS.gene78492 | 0.800827 | 1.20E-48 | -1.69E-46 |
| MS.gene059124 | MS.gene78492 | 0.804616 | 1.98E-49 | -1.69E-46 |
| MS.gene059128 | MS.gene78492 | 0.82026 | 7.53E-53 | -1.69E-46 |
| MS.gene059161 | MS.gene78492 | 0.804412 | 2.19E-49 | -1.69E-46 |
| MS.gene059249 | MS.gene78492 | 0.813515 | 2.46E-51 | -1.69E-46 |
| MS.gene059283 | MS.gene78492 | 0.81674 | 4.73E-52 | -1.69E-46 |
| MS.gene059331 | MS.gene78492 | 0.801368 | 9.30E-49 | -1.69E-46 |
| MS.gene059713 | MS.gene78492 | 0.802441 | 5.60E-49 | -1.69E-46 |
| MS.gene059725 | MS.gene78492 | 0.818265 | 2.15E-52 | -1.69E-46 |
| MS.gene059789 | MS.gene78492 | 0.805072 | 1.59E-49 | -1.69E-46 |
| MS.gene05979 | MS.gene78492 | 0.803432 | 3.50E-49 | -1.69E-46 |
| MS.gene059842 | MS.gene78492 | 0.839016 | 2.04E-57 | -1.69E-46 |
| MS.gene059937 | MS.gene78492 | 0.818367 | 2.03E-52 | -1.69E-46 |
| MS.gene060011 | MS.gene78492 | 0.813855 | 2.07E-51 | -1.69E-46 |
| MS.gene060084 | MS.gene78492 | 0.813134 | 2.98E-51 | -1.69E-46 |
| MS.gene060137 | MS.gene78492 | -0.800585 | 1.35E-48 | -1.69E-46 |
| MS.gene060296 | MS.gene78492 | 0.811272 | 7.61E-51 | -1.69E-46 |
| MS.gene060310 | MS.gene78492 | 0.812407 | 4.31E-51 | -1.69E-46 |
| MS.gene060322 | MS.gene78492 | 0.807202 | 5.67E-50 | -1.69E-46 |
| MS.gene060637 | MS.gene78492 | 0.852418 | 4.68E-61 | -1.69E-46 |
| MS.gene060683 | MS.gene78492 | 0.855375 | 6.58E-62 | -1.69E-46 |
| MS.gene060685 | MS.gene78492 | 0.853521 | 2.26E-61 | -1.69E-46 |
| MS.gene060802 | MS.gene78492 | 0.850545 | 1.58E-60 | -1.69E-46 |
| MS.gene060803 | MS.gene78492 | 0.889323 | 2.69E-73 | -1.69E-46 |
| MS.gene060907 | MS.gene78492 | 0.801046 | 1.08E-48 | -1.69E-46 |
| MS.gene060998 | MS.gene78492 | 0.860466 | 2.03E-63 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78492.t1 | MTR_2g451540 | 97.521 | 726 | 17 | 1 | 1 | 726 | 1 | 725 | 0.0 | 1450 |
| MS.gene78492.t1 | MTR_1g012840 | 50.941 | 744 | 307 | 14 | 1 | 724 | 1 | 706 | 0.0 | 699 |
| MS.gene78492.t1 | MTR_4g132780 | 42.796 | 465 | 185 | 8 | 285 | 672 | 279 | 739 | 4.82e-109 | 349 |
| MS.gene78492.t1 | MTR_4g132780 | 43.662 | 142 | 79 | 1 | 24 | 164 | 22 | 163 | 1.19e-30 | 129 |
| MS.gene78492.t1 | MTR_2g025130 | 40.940 | 447 | 223 | 7 | 239 | 677 | 29 | 442 | 5.14e-101 | 318 |
| MS.gene78492.t1 | MTR_7g059150 | 36.752 | 117 | 69 | 2 | 37 | 150 | 92 | 206 | 6.59e-15 | 75.9 |
| MS.gene78492.t1 | MTR_2g090135 | 34.188 | 117 | 72 | 2 | 37 | 150 | 95 | 209 | 1.38e-13 | 72.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene78492.t1 | AT2G25290 | 53.343 | 718 | 299 | 10 | 28 | 726 | 40 | 740 | 0.0 | 733 |
| MS.gene78492.t1 | AT2G25290 | 53.343 | 718 | 299 | 10 | 28 | 726 | 40 | 740 | 0.0 | 733 |
| MS.gene78492.t1 | AT2G25290 | 53.343 | 718 | 299 | 10 | 28 | 726 | 40 | 740 | 0.0 | 733 |
| MS.gene78492.t1 | AT2G25290 | 53.343 | 718 | 299 | 10 | 28 | 726 | 40 | 740 | 0.0 | 733 |
| MS.gene78492.t1 | AT4G32070 | 51.064 | 752 | 308 | 14 | 25 | 726 | 36 | 777 | 0.0 | 713 |
| MS.gene78492.t1 | AT4G32070 | 51.064 | 752 | 308 | 14 | 25 | 726 | 36 | 777 | 0.0 | 713 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 113 | 791 | 0.0 | 600 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 63 | 741 | 0.0 | 600 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 63 | 741 | 0.0 | 600 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 123 | 801 | 0.0 | 599 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 123 | 801 | 0.0 | 599 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 33 | 711 | 0.0 | 598 |
| MS.gene78492.t1 | AT5G20360 | 47.989 | 696 | 335 | 11 | 37 | 722 | 33 | 711 | 0.0 | 598 |
| MS.gene78492.t1 | AT1G62390 | 38.149 | 713 | 366 | 11 | 27 | 675 | 38 | 739 | 2.26e-145 | 443 |
| MS.gene78492.t1 | AT4G30480 | 35.897 | 117 | 70 | 2 | 37 | 150 | 102 | 216 | 1.99e-12 | 68.9 |
Find 137 sgRNAs with CRISPR-Local
Find 163 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGTCGAATTCAAATT+AGG | 0.124452 | 2.2:+36726067 | MS.gene78492:CDS |
| GGAGAAACAAGTGAAGAAAA+TGG | 0.245674 | 2.2:+36724204 | MS.gene78492:CDS |
| CAACAATGCTGAGGAGAATA+TGG | 0.273348 | 2.2:+36725874 | MS.gene78492:CDS |
| GGCGATTAATGAATGCAATT+TGG | 0.285660 | 2.2:+36724473 | MS.gene78492:CDS |
| AACAAAGCTTTACCGTATTT+CGG | 0.290443 | 2.2:-36724510 | None:intergenic |
| TTCACTACACAACCGTTCTT+AGG | 0.301848 | 2.2:-36725326 | None:intergenic |
| TAACTTCTCTAAGTTGAAAA+AGG | 0.302872 | 2.2:-36725085 | None:intergenic |
| CGGCTCTAGCATTGTTCAAT+TGG | 0.306034 | 2.2:+36725561 | MS.gene78492:CDS |
| GGACAGCACTGCACCAATTA+AGG | 0.317786 | 2.2:+36724860 | MS.gene78492:CDS |
| TCCAACGCCATTATATTATT+CGG | 0.323065 | 2.2:-36724612 | None:intergenic |
| CACTTGTCGAATTCAAATTA+GGG | 0.324137 | 2.2:+36726068 | MS.gene78492:CDS |
| GCTGAGGAGAATATGGAAAA+AGG | 0.329603 | 2.2:+36725881 | MS.gene78492:CDS |
| TGATCGTCCTCAGCCTTAAT+TGG | 0.336874 | 2.2:-36724873 | None:intergenic |
| GGCTCTAGCATTGTTCAATT+GGG | 0.339228 | 2.2:+36725562 | MS.gene78492:CDS |
| TCATAGAATGGATCGTGATT+AGG | 0.339265 | 2.2:-36725257 | None:intergenic |
| TCGAACAAGCGAAACTTTCC+TGG | 0.341770 | 2.2:+36725786 | MS.gene78492:CDS |
| TTATGAGGCTTTGAATAGAT+TGG | 0.361909 | 2.2:+36724548 | MS.gene78492:CDS |
| AGGAGTTTCATCCTTTCGTT+TGG | 0.362101 | 2.2:+36726359 | MS.gene78492:CDS |
| TACGAAGGCTTTCTTGCTCT+TGG | 0.363383 | 2.2:+36725752 | MS.gene78492:CDS |
| TACCTCCTGCCATGTCAAAT+AGG | 0.379171 | 2.2:-36725523 | None:intergenic |
| GTGGGCTGAAACAGGATCTC+AGG | 0.399350 | 2.2:+36725202 | MS.gene78492:CDS |
| ACAAGAACTGCTCCAAGGCT+TGG | 0.406799 | 2.2:-36725122 | None:intergenic |
| TAAGCAGAAAGAGGATGTTA+AGG | 0.407983 | 2.2:+36724953 | MS.gene78492:CDS |
| GAATTGAAGTGGGCTGAAAC+AGG | 0.411735 | 2.2:+36725194 | MS.gene78492:CDS |
| TCAAATAACACTGCTGTAGA+TGG | 0.416089 | 2.2:+36726190 | MS.gene78492:CDS |
| TGATGTGGAAAAGGTTGAAA+TGG | 0.417154 | 2.2:+36725295 | MS.gene78492:CDS |
| TATAAGATGGGCTCAATTGC+CGG | 0.418935 | 2.2:+36725052 | MS.gene78492:CDS |
| ACCTCCACTACCGGGTTGGA+TGG | 0.420004 | 2.2:+36725947 | MS.gene78492:CDS |
| GAGAAACAAGTGAAGAAAAT+GGG | 0.422130 | 2.2:+36724205 | MS.gene78492:CDS |
| ATGCTAGAGCCGTCATCTCT+TGG | 0.426116 | 2.2:-36725550 | None:intergenic |
| ACCCGTATGGCATGAATCAT+TGG | 0.428713 | 2.2:+36726093 | MS.gene78492:CDS |
| AAATTAAAAGTTCGTATGAA+TGG | 0.429486 | 2.2:+36725663 | MS.gene78492:CDS |
| GATGGAGCCGAATAATATAA+TGG | 0.430633 | 2.2:+36724605 | MS.gene78492:CDS |
| AACATTACAGCTACATCTGT+TGG | 0.438941 | 2.2:-36726154 | None:intergenic |
| TGTGACAGGTTCCCAAGCCT+TGG | 0.443112 | 2.2:+36725110 | MS.gene78492:CDS |
| AGATGAAGTTTCTCATAGAA+TGG | 0.443646 | 2.2:-36725269 | None:intergenic |
| CTCAGTGAAACCTCCACTAC+CGG | 0.444276 | 2.2:+36725938 | MS.gene78492:CDS |
| GCTCATCTTGTGTTGAGGAT+TGG | 0.446370 | 2.2:+36725366 | MS.gene78492:CDS |
| TTCTTTAGAAGAATCTTCTT+CGG | 0.448789 | 2.2:-36725627 | None:intergenic |
| CAAGAACTGCTCCAAGGCTT+GGG | 0.454815 | 2.2:-36725121 | None:intergenic |
| AAAGATGGTTCAACATAATC+CGG | 0.460718 | 2.2:-36724708 | None:intergenic |
| CGATACTCTTCTTCTGAACA+AGG | 0.468671 | 2.2:-36726385 | None:intergenic |
| TTAGAGAAGTTATTTGTGAC+AGG | 0.469020 | 2.2:+36725096 | MS.gene78492:CDS |
| TGCTATATGCAGATGGGACT+TGG | 0.472267 | 2.2:+36724438 | MS.gene78492:CDS |
| GTCGTATGTGCGGAGTAATA+TGG | 0.475460 | 2.2:+36724410 | MS.gene78492:CDS |
| CAGAAAGAATATGCAAAAGC+TGG | 0.482907 | 2.2:+36725689 | MS.gene78492:CDS |
| GGGGAAATGTGCATATGTCT+AGG | 0.483385 | 2.2:+36725582 | MS.gene78492:CDS |
| AAAAGTGCACTTGAAGATAG+AGG | 0.485144 | 2.2:+36724651 | MS.gene78492:CDS |
| GTCACAGATAAATCTCTTGT+GGG | 0.488756 | 2.2:+36726024 | MS.gene78492:CDS |
| GAAACTAGAAGAGAAGAAAG+AGG | 0.489348 | 2.2:+36724836 | MS.gene78492:CDS |
| TGGGACTTGGTGAGTACCCT+AGG | 0.490644 | 2.2:+36724451 | MS.gene78492:CDS |
| TAACCCATCCAACCCGGTAG+TGG | 0.491029 | 2.2:-36725951 | None:intergenic |
| TCGGAAGGCACGTCAAAAGA+TGG | 0.491701 | 2.2:-36724723 | None:intergenic |
| TATAATGGCGTTGGAGATCT+CGG | 0.495213 | 2.2:+36724620 | MS.gene78492:CDS |
| GAAGAGAGCGAGGTGTTATG+AGG | 0.496712 | 2.2:+36724533 | MS.gene78492:CDS |
| CAAAATTGATGAAATAGTAC+AGG | 0.497762 | 2.2:+36726299 | MS.gene78492:CDS |
| AATTAAAAGTTCGTATGAAT+GGG | 0.498990 | 2.2:+36725664 | MS.gene78492:CDS |
| TACTTTGTTGTTTATTGCCA+CGG | 0.500099 | 2.2:+36724275 | MS.gene78492:CDS |
| ATCAGATGAAACTGCTGAGC+TGG | 0.506220 | 2.2:+36725988 | MS.gene78492:CDS |
| TTCCAATGATTCATGCCATA+CGG | 0.509759 | 2.2:-36726095 | None:intergenic |
| GGCGTTGGAGATCTCGGATA+AGG | 0.510091 | 2.2:+36724626 | MS.gene78492:CDS |
| TCATCTGAATGATGTGGAAA+AGG | 0.512724 | 2.2:+36725286 | MS.gene78492:CDS |
| GTAATAAGATGTTTCAAAAG+AGG | 0.513730 | 2.2:+36724319 | MS.gene78492:CDS |
| GCCGAATAATATAATGGCGT+TGG | 0.518149 | 2.2:+36724611 | MS.gene78492:CDS |
| CTTGAAGTTACTCCGAAATA+CGG | 0.519201 | 2.2:+36724498 | MS.gene78492:CDS |
| GTATCATTATCATACGCATT+CGG | 0.522823 | 2.2:-36724255 | None:intergenic |
| CCTCCACTACCGGGTTGGAT+GGG | 0.524928 | 2.2:+36725948 | MS.gene78492:CDS |
| TCAAATTAGGGCTACCCGTA+TGG | 0.527716 | 2.2:+36726080 | MS.gene78492:CDS |
| TCCAATGATTCATGCCATAC+GGG | 0.528365 | 2.2:-36726094 | None:intergenic |
| GAGGGATCTTCGAGGAGCTA+TGG | 0.528661 | 2.2:+36724338 | MS.gene78492:CDS |
| ATTGAGAAGTTTGAACATGC+AGG | 0.538923 | 2.2:+36726124 | MS.gene78492:CDS |
| TTGCATTCATTAATCGCCCT+AGG | 0.542158 | 2.2:-36724468 | None:intergenic |
| TTGCTTCTCTACAATTTCAT+CGG | 0.546575 | 2.2:-36724805 | None:intergenic |
| TGAGAAAATCGAGCTGCCTC+CGG | 0.549277 | 2.2:+36724689 | MS.gene78492:CDS |
| TAATAAGATGTTTCAAAAGA+GGG | 0.549709 | 2.2:+36724320 | MS.gene78492:CDS |
| GGGAAATGTGCATATGTCTA+GGG | 0.549993 | 2.2:+36725583 | MS.gene78492:CDS |
| GCTCAAGAGTTGAAGGAAGA+AGG | 0.551067 | 2.2:+36724297 | MS.gene78492:CDS |
| TGCCACGGCTCAAGAGTTGA+AGG | 0.552666 | 2.2:+36724290 | MS.gene78492:CDS |
| TGTTAGCTCATCTTGTGTTG+AGG | 0.554112 | 2.2:+36725361 | MS.gene78492:CDS |
| TTCAAATAACCCATCCAACC+CGG | 0.554807 | 2.2:-36725957 | None:intergenic |
| TTCTTGCTCTTGGTCAGCAG+CGG | 0.555376 | 2.2:+36725762 | MS.gene78492:CDS |
| TTCCTTCAACTCTTGAGCCG+TGG | 0.557472 | 2.2:-36724292 | None:intergenic |
| CAAGGCCTATTTGACATGGC+AGG | 0.561952 | 2.2:+36725518 | MS.gene78492:CDS |
| GACACATCTATATGATCTCT+CGG | 0.563958 | 2.2:-36724390 | None:intergenic |
| CTGAGCTGGCGGCAAACATG+AGG | 0.575937 | 2.2:+36726002 | MS.gene78492:CDS |
| CACTGCACCAATTAAGGCTG+AGG | 0.577282 | 2.2:+36724866 | MS.gene78492:CDS |
| GGTCACAGATAAATCTCTTG+TGG | 0.578048 | 2.2:+36726023 | MS.gene78492:CDS |
| CCCATCCAACCCGGTAGTGG+AGG | 0.578546 | 2.2:-36725948 | None:intergenic |
| TTGATGAAATAGTACAGGCA+TGG | 0.582822 | 2.2:+36726304 | MS.gene78492:CDS |
| ATGGATAATGCTCCTAAGAA+CGG | 0.586076 | 2.2:+36725314 | MS.gene78492:CDS |
| ATCTTCGAGGAGCTATGGTA+AGG | 0.587773 | 2.2:+36724343 | MS.gene78492:CDS |
| TGCATTCATTAATCGCCCTA+GGG | 0.591150 | 2.2:-36724467 | None:intergenic |
| CTTCGGATGAAGAATTGAAG+TGG | 0.591646 | 2.2:+36725183 | MS.gene78492:CDS |
| GGCTGCGTGCTATATGCAGA+TGG | 0.591996 | 2.2:+36724431 | MS.gene78492:CDS |
| GCTCTAGCATTGTTCAATTG+GGG | 0.593453 | 2.2:+36725563 | MS.gene78492:CDS |
| GAACAAGGGTTCCAAACGAA+AGG | 0.595231 | 2.2:-36726370 | None:intergenic |
| TGAAACCTCCACTACCGGGT+TGG | 0.596224 | 2.2:+36725943 | MS.gene78492:CDS |
| GCAGAAAGAGGATGTTAAGG+AGG | 0.597588 | 2.2:+36724956 | MS.gene78492:CDS |
| TTTCAAAAGAGGGATCTTCG+AGG | 0.598758 | 2.2:+36724330 | MS.gene78492:CDS |
| ACCTCTGTGGAGGGCCATGT+CGG | 0.600718 | 2.2:-36725839 | None:intergenic |
| CTCATACAAGCTCAAAGGCA+TGG | 0.603320 | 2.2:-36726416 | None:intergenic |
| GAAACTTCATCTGAATGATG+TGG | 0.604688 | 2.2:+36725280 | MS.gene78492:CDS |
| CAGCAGTGTTATTTGAACAG+TGG | 0.607319 | 2.2:-36726183 | None:intergenic |
| TGGGCTGAAACAGGATCTCA+GGG | 0.612723 | 2.2:+36725203 | MS.gene78492:CDS |
| AGGTAAGTTCCAAGAGATGA+CGG | 0.618181 | 2.2:+36725541 | MS.gene78492:CDS |
| ATTTGACAAGAACTGCTCCA+AGG | 0.619046 | 2.2:-36725127 | None:intergenic |
| GTCAAATATAGAGATCAAGA+AGG | 0.619076 | 2.2:+36725143 | MS.gene78492:CDS |
| TTCGGATGAAGAATTGAAGT+GGG | 0.621321 | 2.2:+36725184 | MS.gene78492:CDS |
| TCATCTTTACAACAATGCTG+AGG | 0.623420 | 2.2:+36725865 | MS.gene78492:CDS |
| AAAGTGCACTTGAAGATAGA+GGG | 0.624772 | 2.2:+36724652 | MS.gene78492:CDS |
| TCAGTGAAACCTCCACTACC+GGG | 0.624891 | 2.2:+36725939 | MS.gene78492:CDS |
| AGCAACTCATACAAGCTCAA+AGG | 0.626181 | 2.2:-36726421 | None:intergenic |
| ATGTGCATATGTCTAGGGCA+AGG | 0.630423 | 2.2:+36725588 | MS.gene78492:CDS |
| GCTGCGTGCTATATGCAGAT+GGG | 0.637013 | 2.2:+36724432 | MS.gene78492:CDS |
| ATATAGATGTGTCGTATGTG+CGG | 0.638921 | 2.2:+36724400 | MS.gene78492:CDS |
| TAGCTTCTACTATATACAGT+CGG | 0.639708 | 2.2:-36725232 | None:intergenic |
| GGCCTATTTGACATGGCAGG+AGG | 0.642993 | 2.2:+36725521 | MS.gene78492:CDS |
| ACTACTGAGTGCATAATACC+AGG | 0.644085 | 2.2:-36725804 | None:intergenic |
| TGGGATGAAGCTCTATTCAG+AGG | 0.644129 | 2.2:+36725463 | MS.gene78492:CDS |
| AAGATGAAGAACCTCTGTGG+AGG | 0.649172 | 2.2:-36725849 | None:intergenic |
| GGGACTTGGTGAGTACCCTA+GGG | 0.649406 | 2.2:+36724452 | MS.gene78492:CDS |
| TGACTTGATCACAATCACTT+CGG | 0.649854 | 2.2:+36725166 | MS.gene78492:CDS |
| AATTGTAGAGAAGCAAGCTG+AGG | 0.649987 | 2.2:+36724812 | MS.gene78492:CDS |
| ACTAGAAGAGAAGAAAGAGG+AGG | 0.651831 | 2.2:+36724839 | MS.gene78492:CDS |
| GATACTCTTCTTCTGAACAA+GGG | 0.652197 | 2.2:-36726384 | None:intergenic |
| AGATGAAGAACCTCTGTGGA+GGG | 0.653251 | 2.2:-36725848 | None:intergenic |
| AGCGCAAGGCCTATTTGACA+TGG | 0.654459 | 2.2:+36725514 | MS.gene78492:CDS |
| AAGCTTTGTTGAAGAGAGCG+AGG | 0.655766 | 2.2:+36724523 | MS.gene78492:CDS |
| AGATGAAACTGCTGAGCTGG+CGG | 0.671158 | 2.2:+36725991 | MS.gene78492:CDS |
| CGGTTGTGTAGTGAAATCAA+AGG | 0.675920 | 2.2:+36725334 | MS.gene78492:CDS |
| GTTACAAGTGAAGAAGCGCA+AGG | 0.694528 | 2.2:+36725500 | MS.gene78492:CDS |
| AATGGGAATCATAGCAACGA+CGG | 0.698124 | 2.2:+36724222 | MS.gene78492:CDS |
| TCACAGATAAATCTCTTGTG+GGG | 0.699010 | 2.2:+36726025 | MS.gene78492:CDS |
| GATGGTTCAACATAATCCGG+AGG | 0.699395 | 2.2:-36724705 | None:intergenic |
| GTAATATAGATTTACCGACA+TGG | 0.713914 | 2.2:+36725825 | MS.gene78492:CDS |
| ACCGACATGGCCCTCCACAG+AGG | 0.742103 | 2.2:+36725838 | MS.gene78492:CDS |
| GTAAAGATGAAGAACCTCTG+TGG | 0.749593 | 2.2:-36725852 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATCTGACTTAATTTTAA+TGG | - | chr2.2:36725732-36725751 | None:intergenic | 15.0% |
| !! | AAATTAAAAGTTCGTATGAA+TGG | + | chr2.2:36725663-36725682 | MS.gene78492:CDS | 20.0% |
| !! | AATTAAAAGTTCGTATGAAT+GGG | + | chr2.2:36725664-36725683 | MS.gene78492:CDS | 20.0% |
| !! | ATATGATAACATATCTATTC+AGG | - | chr2.2:36726247-36726266 | None:intergenic | 20.0% |
| !! | TAATAAGATGTTTCAAAAGA+GGG | + | chr2.2:36724320-36724339 | MS.gene78492:CDS | 20.0% |
| ! | AAAAATTGATAAGCAGAAAG+AGG | + | chr2.2:36724944-36724963 | MS.gene78492:CDS | 25.0% |
| ! | CAAAATTGATGAAATAGTAC+AGG | + | chr2.2:36726299-36726318 | MS.gene78492:CDS | 25.0% |
| ! | GTAATAAGATGTTTCAAAAG+AGG | + | chr2.2:36724319-36724338 | MS.gene78492:CDS | 25.0% |
| ! | GTCAATGAAGAAAAAAGTAA+TGG | + | chr2.2:36724978-36724997 | MS.gene78492:CDS | 25.0% |
| !! | ACTTAGATTTTCATGAACTT+GGG | + | chr2.2:36725444-36725463 | MS.gene78492:CDS | 25.0% |
| !! | ATTAAGTCAGATTTTTACGA+AGG | + | chr2.2:36725737-36725756 | MS.gene78492:CDS | 25.0% |
| !! | TAACTTCTCTAAGTTGAAAA+AGG | - | chr2.2:36725088-36725107 | None:intergenic | 25.0% |
| !! | TACTTAGATTTTCATGAACT+TGG | + | chr2.2:36725443-36725462 | MS.gene78492:CDS | 25.0% |
| !! | TTCTTTAGAAGAATCTTCTT+CGG | - | chr2.2:36725630-36725649 | None:intergenic | 25.0% |
| !!! | AAAACAGCAAAACTTGTTTT+TGG | + | chr2.2:36725023-36725042 | MS.gene78492:CDS | 25.0% |
| !!! | TTTTGGTGATGATATAAGAT+GGG | + | chr2.2:36725040-36725059 | MS.gene78492:CDS | 25.0% |
| !!! | TTTTTGGTGATGATATAAGA+TGG | + | chr2.2:36725039-36725058 | MS.gene78492:CDS | 25.0% |
| AAAGATGGTTCAACATAATC+CGG | - | chr2.2:36724711-36724730 | None:intergenic | 30.0% | |
| AACAAAGCTTTACCGTATTT+CGG | - | chr2.2:36724513-36724532 | None:intergenic | 30.0% | |
| AACTGTTCAAAAATCACGTT+GGG | + | chr2.2:36725405-36725424 | MS.gene78492:CDS | 30.0% | |
| AGATGAAGTTTCTCATAGAA+TGG | - | chr2.2:36725272-36725291 | None:intergenic | 30.0% | |
| ATACTAACACTTCTTCTAAC+AGG | + | chr2.2:36726267-36726286 | MS.gene78492:intron | 30.0% | |
| CACTTGTCGAATTCAAATTA+GGG | + | chr2.2:36726068-36726087 | MS.gene78492:CDS | 30.0% | |
| GAAAAAGAGCAAAAAAGAGA+AGG | + | chr2.2:36724773-36724792 | MS.gene78492:CDS | 30.0% | |
| GAGAAACAAGTGAAGAAAAT+GGG | + | chr2.2:36724205-36724224 | MS.gene78492:CDS | 30.0% | |
| GCGTAATAAATCGAAAAAGA+AGG | + | chr2.2:36724911-36724930 | MS.gene78492:CDS | 30.0% | |
| GTAATATAGATTTACCGACA+TGG | + | chr2.2:36725825-36725844 | MS.gene78492:CDS | 30.0% | |
| GTATCATTATCATACGCATT+CGG | - | chr2.2:36724258-36724277 | None:intergenic | 30.0% | |
| GTCAAATATAGAGATCAAGA+AGG | + | chr2.2:36725143-36725162 | MS.gene78492:CDS | 30.0% | |
| TAGCTTCTACTATATACAGT+CGG | - | chr2.2:36725235-36725254 | None:intergenic | 30.0% | |
| TCACTTGTCGAATTCAAATT+AGG | + | chr2.2:36726067-36726086 | MS.gene78492:CDS | 30.0% | |
| TCCAACGCCATTATATTATT+CGG | - | chr2.2:36724615-36724634 | None:intergenic | 30.0% | |
| TTAGAGAAGTTATTTGTGAC+AGG | + | chr2.2:36725096-36725115 | MS.gene78492:CDS | 30.0% | |
| TTGCTTCTCTACAATTTCAT+CGG | - | chr2.2:36724808-36724827 | None:intergenic | 30.0% | |
| !! | TACTTTGTTGTTTATTGCCA+CGG | + | chr2.2:36724275-36724294 | MS.gene78492:CDS | 30.0% |
| !! | TTATGAGGCTTTGAATAGAT+TGG | + | chr2.2:36724548-36724567 | MS.gene78492:CDS | 30.0% |
| !!! | ACAAGTTTTGCTGTTTTCTT+AGG | - | chr2.2:36725020-36725039 | None:intergenic | 30.0% |
| !!! | TGTTAGTACTGTTTTGAAGA+TGG | + | chr2.2:36724587-36724606 | MS.gene78492:CDS | 30.0% |
| AAAGTGCACTTGAAGATAGA+GGG | + | chr2.2:36724652-36724671 | MS.gene78492:CDS | 35.0% | |
| AACATTACAGCTACATCTGT+TGG | - | chr2.2:36726157-36726176 | None:intergenic | 35.0% | |
| ATATAGATGTGTCGTATGTG+CGG | + | chr2.2:36724400-36724419 | MS.gene78492:CDS | 35.0% | |
| ATGGATAATGCTCCTAAGAA+CGG | + | chr2.2:36725314-36725333 | MS.gene78492:CDS | 35.0% | |
| ATTGAGAAGTTTGAACATGC+AGG | + | chr2.2:36726124-36726143 | MS.gene78492:CDS | 35.0% | |
| CAGAAAGAATATGCAAAAGC+TGG | + | chr2.2:36725689-36725708 | MS.gene78492:CDS | 35.0% | |
| CTTGAAGTTACTCCGAAATA+CGG | + | chr2.2:36724498-36724517 | MS.gene78492:CDS | 35.0% | |
| GAAACTAGAAGAGAAGAAAG+AGG | + | chr2.2:36724836-36724855 | MS.gene78492:CDS | 35.0% | |
| GAAACTTCATCTGAATGATG+TGG | + | chr2.2:36725280-36725299 | MS.gene78492:CDS | 35.0% | |
| GAACTGTTCAAAAATCACGT+TGG | + | chr2.2:36725404-36725423 | MS.gene78492:CDS | 35.0% | |
| GAAGCTAAAAAGTTGCAGAA+AGG | + | chr2.2:36726339-36726358 | MS.gene78492:CDS | 35.0% | |
| GACACATCTATATGATCTCT+CGG | - | chr2.2:36724393-36724412 | None:intergenic | 35.0% | |
| GATACTCTTCTTCTGAACAA+GGG | - | chr2.2:36726387-36726406 | None:intergenic | 35.0% | |
| GATGGAGCCGAATAATATAA+TGG | + | chr2.2:36724605-36724624 | MS.gene78492:CDS | 35.0% | |
| GGAAAAAGGAATGCTGATAT+GGG | + | chr2.2:36725895-36725914 | MS.gene78492:CDS | 35.0% | |
| GGAGAAACAAGTGAAGAAAA+TGG | + | chr2.2:36724204-36724223 | MS.gene78492:CDS | 35.0% | |
| GGCGATTAATGAATGCAATT+TGG | + | chr2.2:36724473-36724492 | MS.gene78492:CDS | 35.0% | |
| GTCACAGATAAATCTCTTGT+GGG | + | chr2.2:36726024-36726043 | MS.gene78492:CDS | 35.0% | |
| TAAGCAGAAAGAGGATGTTA+AGG | + | chr2.2:36724953-36724972 | MS.gene78492:CDS | 35.0% | |
| TCAAATAACACTGCTGTAGA+TGG | + | chr2.2:36726190-36726209 | MS.gene78492:CDS | 35.0% | |
| TCACAGATAAATCTCTTGTG+GGG | + | chr2.2:36726025-36726044 | MS.gene78492:CDS | 35.0% | |
| TCATAGAATGGATCGTGATT+AGG | - | chr2.2:36725260-36725279 | None:intergenic | 35.0% | |
| TCATCTGAATGATGTGGAAA+AGG | + | chr2.2:36725286-36725305 | MS.gene78492:CDS | 35.0% | |
| TCATCTTTACAACAATGCTG+AGG | + | chr2.2:36725865-36725884 | MS.gene78492:CDS | 35.0% | |
| TGAAAAAGGCTGCAATTAAC+CGG | - | chr2.2:36725074-36725093 | None:intergenic | 35.0% | |
| TGACTTGATCACAATCACTT+CGG | + | chr2.2:36725166-36725185 | MS.gene78492:CDS | 35.0% | |
| TGATGTGGAAAAGGTTGAAA+TGG | + | chr2.2:36725295-36725314 | MS.gene78492:CDS | 35.0% | |
| TGGAAAAAGGAATGCTGATA+TGG | + | chr2.2:36725894-36725913 | MS.gene78492:CDS | 35.0% | |
| TTCCAATGATTCATGCCATA+CGG | - | chr2.2:36726098-36726117 | None:intergenic | 35.0% | |
| TTCGGATGAAGAATTGAAGT+GGG | + | chr2.2:36725184-36725203 | MS.gene78492:CDS | 35.0% | |
| TTGATGAAATAGTACAGGCA+TGG | + | chr2.2:36726304-36726323 | MS.gene78492:CDS | 35.0% | |
| ! | AAAAGTGCACTTGAAGATAG+AGG | + | chr2.2:36724651-36724670 | MS.gene78492:CDS | 35.0% |
| ! | CTTTTCTTTCACTGCCTTTT+CGG | - | chr2.2:36724745-36724764 | None:intergenic | 35.0% |
| AATGGGAATCATAGCAACGA+CGG | + | chr2.2:36724222-36724241 | MS.gene78492:CDS | 40.0% | |
| AATTGTAGAGAAGCAAGCTG+AGG | + | chr2.2:36724812-36724831 | MS.gene78492:CDS | 40.0% | |
| ACACTTCTTCTAACAGGTCT+AGG | + | chr2.2:36726273-36726292 | MS.gene78492:intron | 40.0% | |
| ACTACTGAGTGCATAATACC+AGG | - | chr2.2:36725807-36725826 | None:intergenic | 40.0% | |
| ACTAGAAGAGAAGAAAGAGG+AGG | + | chr2.2:36724839-36724858 | MS.gene78492:CDS | 40.0% | |
| AGGAGTTTCATCCTTTCGTT+TGG | + | chr2.2:36726359-36726378 | MS.gene78492:CDS | 40.0% | |
| AGGTAAGTTCCAAGAGATGA+CGG | + | chr2.2:36725541-36725560 | MS.gene78492:CDS | 40.0% | |
| ATCGAAAAAGAAGGCAGCTA+AGG | + | chr2.2:36724920-36724939 | MS.gene78492:CDS | 40.0% | |
| ATTTGACAAGAACTGCTCCA+AGG | - | chr2.2:36725130-36725149 | None:intergenic | 40.0% | |
| CAACAATGCTGAGGAGAATA+TGG | + | chr2.2:36725874-36725893 | MS.gene78492:CDS | 40.0% | |
| CGATACTCTTCTTCTGAACA+AGG | - | chr2.2:36726388-36726407 | None:intergenic | 40.0% | |
| CGGTTGTGTAGTGAAATCAA+AGG | + | chr2.2:36725334-36725353 | MS.gene78492:CDS | 40.0% | |
| CTTCGGATGAAGAATTGAAG+TGG | + | chr2.2:36725183-36725202 | MS.gene78492:CDS | 40.0% | |
| GAGCAAAAAAGAGAAGGTGA+AGG | + | chr2.2:36724779-36724798 | MS.gene78492:CDS | 40.0% | |
| GCCGAATAATATAATGGCGT+TGG | + | chr2.2:36724611-36724630 | MS.gene78492:CDS | 40.0% | |
| GCTCTAGCATTGTTCAATTG+GGG | + | chr2.2:36725563-36725582 | MS.gene78492:CDS | 40.0% | |
| GCTGAGGAGAATATGGAAAA+AGG | + | chr2.2:36725881-36725900 | MS.gene78492:CDS | 40.0% | |
| GGGAAATGTGCATATGTCTA+GGG | + | chr2.2:36725583-36725602 | MS.gene78492:CDS | 40.0% | |
| GGGAAGAAAAAGAAGCAAGT+AGG | + | chr2.2:36724183-36724202 | MS.gene78492:CDS | 40.0% | |
| GGTCACAGATAAATCTCTTG+TGG | + | chr2.2:36726023-36726042 | MS.gene78492:CDS | 40.0% | |
| GTAAAGATGAAGAACCTCTG+TGG | - | chr2.2:36725855-36725874 | None:intergenic | 40.0% | |
| TCCAATGATTCATGCCATAC+GGG | - | chr2.2:36726097-36726116 | None:intergenic | 40.0% | |
| TGCATTCATTAATCGCCCTA+GGG | - | chr2.2:36724470-36724489 | None:intergenic | 40.0% | |
| TGTTAGCTCATCTTGTGTTG+AGG | + | chr2.2:36725361-36725380 | MS.gene78492:CDS | 40.0% | |
| TTCAAATAACCCATCCAACC+CGG | - | chr2.2:36725960-36725979 | None:intergenic | 40.0% | |
| TTCACTACACAACCGTTCTT+AGG | - | chr2.2:36725329-36725348 | None:intergenic | 40.0% | |
| TTGCATTCATTAATCGCCCT+AGG | - | chr2.2:36724471-36724490 | None:intergenic | 40.0% | |
| TTTCAAAAGAGGGATCTTCG+AGG | + | chr2.2:36724330-36724349 | MS.gene78492:CDS | 40.0% | |
| ! | GGCTCTAGCATTGTTCAATT+GGG | + | chr2.2:36725562-36725581 | MS.gene78492:CDS | 40.0% |
| ! | TATAAGATGGGCTCAATTGC+CGG | + | chr2.2:36725052-36725071 | MS.gene78492:CDS | 40.0% |
| ! | TATAATGGCGTTGGAGATCT+CGG | + | chr2.2:36724620-36724639 | MS.gene78492:CDS | 40.0% |
| !! | CAGCAGTGTTATTTGAACAG+TGG | - | chr2.2:36726186-36726205 | None:intergenic | 40.0% |
| AAGATGAAGAACCTCTGTGG+AGG | - | chr2.2:36725852-36725871 | None:intergenic | 45.0% | |
| ACCCGTATGGCATGAATCAT+TGG | + | chr2.2:36726093-36726112 | MS.gene78492:CDS | 45.0% | |
| AGATGAAGAACCTCTGTGGA+GGG | - | chr2.2:36725851-36725870 | None:intergenic | 45.0% | |
| ATCAGATGAAACTGCTGAGC+TGG | + | chr2.2:36725988-36726007 | MS.gene78492:CDS | 45.0% | |
| ATCTTCGAGGAGCTATGGTA+AGG | + | chr2.2:36724343-36724362 | MS.gene78492:CDS | 45.0% | |
| GAACAAGGGTTCCAAACGAA+AGG | - | chr2.2:36726373-36726392 | None:intergenic | 45.0% | |
| GATGGTTCAACATAATCCGG+AGG | - | chr2.2:36724708-36724727 | None:intergenic | 45.0% | |
| GCAGAAAGAGGATGTTAAGG+AGG | + | chr2.2:36724956-36724975 | MS.gene78492:CDS | 45.0% | |
| GCTCAAGAGTTGAAGGAAGA+AGG | + | chr2.2:36724297-36724316 | MS.gene78492:CDS | 45.0% | |
| GCTCATCTTGTGTTGAGGAT+TGG | + | chr2.2:36725366-36725385 | MS.gene78492:CDS | 45.0% | |
| GGGGAAATGTGCATATGTCT+AGG | + | chr2.2:36725582-36725601 | MS.gene78492:CDS | 45.0% | |
| GTCGTATGTGCGGAGTAATA+TGG | + | chr2.2:36724410-36724429 | MS.gene78492:CDS | 45.0% | |
| TACCTCCTGCCATGTCAAAT+AGG | - | chr2.2:36725526-36725545 | None:intergenic | 45.0% | |
| TACGAAGGCTTTCTTGCTCT+TGG | + | chr2.2:36725752-36725771 | MS.gene78492:CDS | 45.0% | |
| TCAAATTAGGGCTACCCGTA+TGG | + | chr2.2:36726080-36726099 | MS.gene78492:CDS | 45.0% | |
| TCGAACAAGCGAAACTTTCC+TGG | + | chr2.2:36725786-36725805 | MS.gene78492:CDS | 45.0% | |
| TGATCGTCCTCAGCCTTAAT+TGG | - | chr2.2:36724876-36724895 | None:intergenic | 45.0% | |
| TGCTATATGCAGATGGGACT+TGG | + | chr2.2:36724438-36724457 | MS.gene78492:CDS | 45.0% | |
| TGGGATGAAGCTCTATTCAG+AGG | + | chr2.2:36725463-36725482 | MS.gene78492:CDS | 45.0% | |
| ! | ATGTGCATATGTCTAGGGCA+AGG | + | chr2.2:36725588-36725607 | MS.gene78492:CDS | 45.0% |
| ! | CGGCTCTAGCATTGTTCAAT+TGG | + | chr2.2:36725561-36725580 | MS.gene78492:CDS | 45.0% |
| ! | GTTACAAGTGAAGAAGCGCA+AGG | + | chr2.2:36725500-36725519 | MS.gene78492:CDS | 45.0% |
| ! | TCTTTCACTGCCTTTTCGGA+AGG | - | chr2.2:36724741-36724760 | None:intergenic | 45.0% |
| ! | TTTTGACGTGCCTTCCGAAA+AGG | + | chr2.2:36724728-36724747 | MS.gene78492:CDS | 45.0% |
| !! | AAGCTTTGTTGAAGAGAGCG+AGG | + | chr2.2:36724523-36724542 | MS.gene78492:CDS | 45.0% |
| !! | GAATTGAAGTGGGCTGAAAC+AGG | + | chr2.2:36725194-36725213 | MS.gene78492:CDS | 45.0% |
| ACAAGAACTGCTCCAAGGCT+TGG | - | chr2.2:36725125-36725144 | None:intergenic | 50.0% | |
| AGATGAAACTGCTGAGCTGG+CGG | + | chr2.2:36725991-36726010 | MS.gene78492:CDS | 50.0% | |
| AGCGCAAGGCCTATTTGACA+TGG | + | chr2.2:36725514-36725533 | MS.gene78492:CDS | 50.0% | |
| ATGCTAGAGCCGTCATCTCT+TGG | - | chr2.2:36725553-36725572 | None:intergenic | 50.0% | |
| CAAGAACTGCTCCAAGGCTT+GGG | - | chr2.2:36725124-36725143 | None:intergenic | 50.0% | |
| CAAGGCCTATTTGACATGGC+AGG | + | chr2.2:36725518-36725537 | MS.gene78492:CDS | 50.0% | |
| CACTGCACCAATTAAGGCTG+AGG | + | chr2.2:36724866-36724885 | MS.gene78492:CDS | 50.0% | |
| CTCAGTGAAACCTCCACTAC+CGG | + | chr2.2:36725938-36725957 | MS.gene78492:CDS | 50.0% | |
| GCTGCGTGCTATATGCAGAT+GGG | + | chr2.2:36724432-36724451 | MS.gene78492:CDS | 50.0% | |
| GGACAGCACTGCACCAATTA+AGG | + | chr2.2:36724860-36724879 | MS.gene78492:CDS | 50.0% | |
| TCAGTGAAACCTCCACTACC+GGG | + | chr2.2:36725939-36725958 | MS.gene78492:CDS | 50.0% | |
| TGAGAAAATCGAGCTGCCTC+CGG | + | chr2.2:36724689-36724708 | MS.gene78492:CDS | 50.0% | |
| TGGGCTGAAACAGGATCTCA+GGG | + | chr2.2:36725203-36725222 | MS.gene78492:CDS | 50.0% | |
| TTCCTTCAACTCTTGAGCCG+TGG | - | chr2.2:36724295-36724314 | None:intergenic | 50.0% | |
| TTCTTGCTCTTGGTCAGCAG+CGG | + | chr2.2:36725762-36725781 | MS.gene78492:CDS | 50.0% | |
| ! | GAAGAGAGCGAGGTGTTATG+AGG | + | chr2.2:36724533-36724552 | MS.gene78492:CDS | 50.0% |
| ! | TCGGAAGGCACGTCAAAAGA+TGG | - | chr2.2:36724726-36724745 | None:intergenic | 50.0% |
| GAGGGATCTTCGAGGAGCTA+TGG | + | chr2.2:36724338-36724357 | MS.gene78492:CDS | 55.0% | |
| GGCCTATTTGACATGGCAGG+AGG | + | chr2.2:36725521-36725540 | MS.gene78492:CDS | 55.0% | |
| GGCTGCGTGCTATATGCAGA+TGG | + | chr2.2:36724431-36724450 | MS.gene78492:CDS | 55.0% | |
| TAACCCATCCAACCCGGTAG+TGG | - | chr2.2:36725954-36725973 | None:intergenic | 55.0% | |
| TGAAACCTCCACTACCGGGT+TGG | + | chr2.2:36725943-36725962 | MS.gene78492:CDS | 55.0% | |
| TGCCACGGCTCAAGAGTTGA+AGG | + | chr2.2:36724290-36724309 | MS.gene78492:CDS | 55.0% | |
| TGTGACAGGTTCCCAAGCCT+TGG | + | chr2.2:36725110-36725129 | MS.gene78492:CDS | 55.0% | |
| ! | GGCGTTGGAGATCTCGGATA+AGG | + | chr2.2:36724626-36724645 | MS.gene78492:CDS | 55.0% |
| ! | GTGGGCTGAAACAGGATCTC+AGG | + | chr2.2:36725202-36725221 | MS.gene78492:CDS | 55.0% |
| !! | GGGACTTGGTGAGTACCCTA+GGG | + | chr2.2:36724452-36724471 | MS.gene78492:CDS | 55.0% |
| !! | TGGGACTTGGTGAGTACCCT+AGG | + | chr2.2:36724451-36724470 | MS.gene78492:CDS | 55.0% |
| ACCTCTGTGGAGGGCCATGT+CGG | - | chr2.2:36725842-36725861 | None:intergenic | 60.0% | |
| CTGAGCTGGCGGCAAACATG+AGG | + | chr2.2:36726002-36726021 | MS.gene78492:CDS | 60.0% | |
| ! | ACCTCCACTACCGGGTTGGA+TGG | + | chr2.2:36725947-36725966 | MS.gene78492:CDS | 60.0% |
| ! | CCTCCACTACCGGGTTGGAT+GGG | + | chr2.2:36725948-36725967 | MS.gene78492:CDS | 60.0% |
| ACCGACATGGCCCTCCACAG+AGG | + | chr2.2:36725838-36725857 | MS.gene78492:CDS | 65.0% | |
| ! | CCCATCCAACCCGGTAGTGG+AGG | - | chr2.2:36725951-36725970 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.2 | gene | 36724180 | 36726437 | 36724180 | ID=MS.gene78492 |
| chr2.2 | mRNA | 36724180 | 36726437 | 36724180 | ID=MS.gene78492.t1;Parent=MS.gene78492 |
| chr2.2 | exon | 36724180 | 36726211 | 36724180 | ID=MS.gene78492.t1.exon1;Parent=MS.gene78492.t1 |
| chr2.2 | CDS | 36724180 | 36726211 | 36724180 | ID=cds.MS.gene78492.t1;Parent=MS.gene78492.t1 |
| chr2.2 | exon | 36726289 | 36726437 | 36726289 | ID=MS.gene78492.t1.exon2;Parent=MS.gene78492.t1 |
| chr2.2 | CDS | 36726289 | 36726437 | 36726289 | ID=cds.MS.gene78492.t1;Parent=MS.gene78492.t1 |
| Gene Sequence |
| Protein sequence |
