Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98828.t1 | XP_013453000.1 | 97 | 558 | 17 | 0 | 12 | 569 | 46 | 603 | 1.20E-232 | 815.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98828.t1 | Q6Q151 | 78.0 | 372 | 72 | 5 | 13 | 381 | 47 | 411 | 4.4e-146 | 519.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98828.t1 | G7KN14 | 97.0 | 558 | 17 | 0 | 12 | 569 | 63 | 620 | 8.8e-233 | 815.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene98828 | 0.81631 | 5.91E-52 | -1.69E-46 |
| MS.gene049159 | MS.gene98828 | 0.829161 | 6.01E-55 | -1.69E-46 |
| MS.gene049404 | MS.gene98828 | 0.836101 | 1.14E-56 | -1.69E-46 |
| MS.gene049435 | MS.gene98828 | 0.819514 | 1.12E-52 | -1.69E-46 |
| MS.gene049666 | MS.gene98828 | 0.811864 | 5.66E-51 | -1.69E-46 |
| MS.gene049669 | MS.gene98828 | 0.80753 | 4.83E-50 | -1.69E-46 |
| MS.gene049821 | MS.gene98828 | 0.81648 | 5.41E-52 | -1.69E-46 |
| MS.gene049825 | MS.gene98828 | 0.808813 | 2.58E-50 | -1.69E-46 |
| MS.gene049850 | MS.gene98828 | 0.848909 | 4.54E-60 | -1.69E-46 |
| MS.gene049873 | MS.gene98828 | 0.80216 | 6.40E-49 | -1.69E-46 |
| MS.gene050020 | MS.gene98828 | 0.817467 | 3.25E-52 | -1.69E-46 |
| MS.gene050156 | MS.gene98828 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene050303 | MS.gene98828 | 0.804745 | 1.86E-49 | -1.69E-46 |
| MS.gene050355 | MS.gene98828 | 0.808194 | 3.49E-50 | -1.69E-46 |
| MS.gene050442 | MS.gene98828 | 0.823162 | 1.61E-53 | -1.69E-46 |
| MS.gene050807 | MS.gene98828 | 0.816837 | 4.50E-52 | -1.69E-46 |
| MS.gene050905 | MS.gene98828 | -0.805092 | 1.58E-49 | -1.69E-46 |
| MS.gene051180 | MS.gene98828 | 0.824741 | 6.85E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene98828 | 0.81307 | 3.08E-51 | -1.69E-46 |
| MS.gene051243 | MS.gene98828 | 0.803479 | 3.42E-49 | -1.69E-46 |
| MS.gene051247 | MS.gene98828 | 0.825093 | 5.66E-54 | -1.69E-46 |
| MS.gene051279 | MS.gene98828 | 0.801782 | 7.65E-49 | -1.69E-46 |
| MS.gene051328 | MS.gene98828 | 0.808695 | 2.73E-50 | -1.69E-46 |
| MS.gene051344 | MS.gene98828 | 0.80897 | 2.38E-50 | -1.69E-46 |
| MS.gene05134 | MS.gene98828 | 0.802946 | 4.41E-49 | -1.69E-46 |
| MS.gene051363 | MS.gene98828 | 0.808681 | 2.75E-50 | -1.69E-46 |
| MS.gene05157 | MS.gene98828 | 0.808197 | 3.49E-50 | -1.69E-46 |
| MS.gene051594 | MS.gene98828 | 0.814152 | 1.78E-51 | -1.69E-46 |
| MS.gene051700 | MS.gene98828 | 0.81154 | 6.65E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene98828 | 0.816131 | 6.48E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene98828 | 0.821344 | 4.25E-53 | -1.69E-46 |
| MS.gene051744 | MS.gene98828 | 0.816775 | 4.65E-52 | -1.69E-46 |
| MS.gene051957 | MS.gene98828 | 0.833125 | 6.38E-56 | -1.69E-46 |
| MS.gene052012 | MS.gene98828 | 0.816233 | 6.14E-52 | -1.69E-46 |
| MS.gene052020 | MS.gene98828 | 0.827782 | 1.29E-54 | -1.69E-46 |
| MS.gene052208 | MS.gene98828 | 0.810863 | 9.33E-51 | -1.69E-46 |
| MS.gene052384 | MS.gene98828 | 0.816022 | 6.85E-52 | -1.69E-46 |
| MS.gene052516 | MS.gene98828 | 0.805684 | 1.19E-49 | -1.69E-46 |
| MS.gene052519 | MS.gene98828 | 0.850974 | 1.20E-60 | -1.69E-46 |
| MS.gene052582 | MS.gene98828 | 0.804125 | 2.51E-49 | -1.69E-46 |
| MS.gene052584 | MS.gene98828 | 0.816708 | 4.81E-52 | -1.69E-46 |
| MS.gene052611 | MS.gene98828 | 0.814988 | 1.16E-51 | -1.69E-46 |
| MS.gene052773 | MS.gene98828 | 0.817245 | 3.64E-52 | -1.69E-46 |
| MS.gene052829 | MS.gene98828 | 0.814329 | 1.63E-51 | -1.69E-46 |
| MS.gene052863 | MS.gene98828 | 0.835382 | 1.73E-56 | -1.69E-46 |
| MS.gene053006 | MS.gene98828 | 0.804244 | 2.37E-49 | -1.69E-46 |
| MS.gene053008 | MS.gene98828 | 0.825952 | 3.54E-54 | -1.69E-46 |
| MS.gene053080 | MS.gene98828 | 0.813302 | 2.74E-51 | -1.69E-46 |
| MS.gene053166 | MS.gene98828 | 0.817255 | 3.63E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene98828 | 0.872964 | 2.12E-67 | -1.69E-46 |
| MS.gene053542 | MS.gene98828 | 0.800388 | 1.48E-48 | -1.69E-46 |
| MS.gene053599 | MS.gene98828 | 0.801596 | 8.36E-49 | -1.69E-46 |
| MS.gene05364 | MS.gene98828 | 0.815539 | 8.78E-52 | -1.69E-46 |
| MS.gene053966 | MS.gene98828 | 0.808177 | 3.52E-50 | -1.69E-46 |
| MS.gene05415 | MS.gene98828 | 0.829892 | 3.99E-55 | -1.69E-46 |
| MS.gene054236 | MS.gene98828 | 0.811187 | 7.94E-51 | -1.69E-46 |
| MS.gene054472 | MS.gene98828 | 0.843688 | 1.20E-58 | -1.69E-46 |
| MS.gene05447 | MS.gene98828 | 0.835755 | 1.40E-56 | -1.69E-46 |
| MS.gene05458 | MS.gene98828 | 0.81836 | 2.04E-52 | -1.69E-46 |
| MS.gene054651 | MS.gene98828 | 0.84303 | 1.80E-58 | -1.69E-46 |
| MS.gene054657 | MS.gene98828 | 0.806794 | 6.92E-50 | -1.69E-46 |
| MS.gene054775 | MS.gene98828 | 0.822985 | 1.77E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene98828 | 0.815105 | 1.10E-51 | -1.69E-46 |
| MS.gene055228 | MS.gene98828 | 0.804528 | 2.07E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene98828 | 0.821318 | 4.30E-53 | -1.69E-46 |
| MS.gene055466 | MS.gene98828 | 0.838925 | 2.15E-57 | -1.69E-46 |
| MS.gene055468 | MS.gene98828 | 0.816336 | 5.83E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene98828 | 0.834619 | 2.70E-56 | -1.69E-46 |
| MS.gene055623 | MS.gene98828 | 0.803641 | 3.16E-49 | -1.69E-46 |
| MS.gene055778 | MS.gene98828 | 0.831762 | 1.39E-55 | -1.69E-46 |
| MS.gene055818 | MS.gene98828 | 0.856787 | 2.54E-62 | -1.69E-46 |
| MS.gene05604 | MS.gene98828 | 0.807788 | 4.26E-50 | -1.69E-46 |
| MS.gene056050 | MS.gene98828 | 0.805873 | 1.08E-49 | -1.69E-46 |
| MS.gene056162 | MS.gene98828 | 0.801768 | 7.70E-49 | -1.69E-46 |
| MS.gene056173 | MS.gene98828 | 0.831721 | 1.42E-55 | -1.69E-46 |
| MS.gene056174 | MS.gene98828 | 0.816738 | 4.74E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene98828 | 0.810771 | 9.76E-51 | -1.69E-46 |
| MS.gene056366 | MS.gene98828 | 0.821264 | 4.43E-53 | -1.69E-46 |
| MS.gene056498 | MS.gene98828 | 0.828645 | 8.01E-55 | -1.69E-46 |
| MS.gene056595 | MS.gene98828 | 0.801386 | 9.23E-49 | -1.69E-46 |
| MS.gene05686 | MS.gene98828 | 0.803734 | 3.03E-49 | -1.69E-46 |
| MS.gene057060 | MS.gene98828 | 0.83331 | 5.74E-56 | -1.69E-46 |
| MS.gene057208 | MS.gene98828 | 0.81605 | 6.75E-52 | -1.69E-46 |
| MS.gene057314 | MS.gene98828 | 0.800604 | 1.33E-48 | -1.69E-46 |
| MS.gene057414 | MS.gene98828 | 0.813496 | 2.49E-51 | -1.69E-46 |
| MS.gene057444 | MS.gene98828 | 0.817514 | 3.17E-52 | -1.69E-46 |
| MS.gene057598 | MS.gene98828 | 0.800141 | 1.66E-48 | -1.69E-46 |
| MS.gene057693 | MS.gene98828 | 0.860301 | 2.27E-63 | -1.69E-46 |
| MS.gene057869 | MS.gene98828 | 0.810415 | 1.17E-50 | -1.69E-46 |
| MS.gene057915 | MS.gene98828 | 0.834435 | 3.00E-56 | -1.69E-46 |
| MS.gene058037 | MS.gene98828 | 0.83043 | 2.95E-55 | -1.69E-46 |
| MS.gene05847 | MS.gene98828 | 0.807973 | 3.89E-50 | -1.69E-46 |
| MS.gene058625 | MS.gene98828 | 0.848114 | 7.53E-60 | -1.69E-46 |
| MS.gene058636 | MS.gene98828 | 0.829929 | 3.91E-55 | -1.69E-46 |
| MS.gene058829 | MS.gene98828 | 0.816856 | 4.46E-52 | -1.69E-46 |
| MS.gene058979 | MS.gene98828 | 0.831383 | 1.72E-55 | -1.69E-46 |
| MS.gene059272 | MS.gene98828 | 0.805234 | 1.47E-49 | -1.69E-46 |
| MS.gene05954 | MS.gene98828 | 0.834691 | 2.59E-56 | -1.69E-46 |
| MS.gene059625 | MS.gene98828 | 0.829178 | 5.95E-55 | -1.69E-46 |
| MS.gene05978 | MS.gene98828 | 0.814241 | 1.70E-51 | -1.69E-46 |
| MS.gene059842 | MS.gene98828 | 0.854539 | 1.15E-61 | -1.69E-46 |
| MS.gene059937 | MS.gene98828 | 0.803156 | 3.99E-49 | -1.69E-46 |
| MS.gene060322 | MS.gene98828 | 0.809081 | 2.26E-50 | -1.69E-46 |
| MS.gene060429 | MS.gene98828 | 0.819056 | 1.42E-52 | -1.69E-46 |
| MS.gene060521 | MS.gene98828 | 0.810716 | 1.00E-50 | -1.69E-46 |
| MS.gene060572 | MS.gene98828 | 0.80581 | 1.11E-49 | -1.69E-46 |
| MS.gene060587 | MS.gene98828 | 0.81412 | 1.81E-51 | -1.69E-46 |
| MS.gene060803 | MS.gene98828 | 0.841823 | 3.76E-58 | -1.69E-46 |
| MS.gene060918 | MS.gene98828 | 0.806856 | 6.71E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene052174 | MS.gene98828 | PPI |
| MS.gene98828 | MS.gene013049 | PPI |
| MS.gene98828 | MS.gene48433 | PPI |
| MS.gene055771 | MS.gene98828 | PPI |
| MS.gene98828 | MS.gene031671 | PPI |
| MS.gene98828 | MS.gene006634 | PPI |
| MS.gene31419 | MS.gene98828 | PPI |
| MS.gene020412 | MS.gene98828 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98828.t1 | MTR_6g084140 | 96.601 | 559 | 19 | 0 | 11 | 569 | 62 | 620 | 0.0 | 1092 |
| MS.gene98828.t1 | MTR_6g084140 | 96.601 | 559 | 19 | 0 | 11 | 569 | 45 | 603 | 0.0 | 1090 |
| MS.gene98828.t1 | MTR_8g442420 | 94.118 | 578 | 26 | 2 | 2 | 571 | 28 | 605 | 0.0 | 1087 |
| MS.gene98828.t1 | MTR_7g105220 | 42.975 | 121 | 61 | 2 | 7 | 127 | 50 | 162 | 2.01e-23 | 97.4 |
| MS.gene98828.t1 | MTR_8g036015 | 38.017 | 121 | 67 | 2 | 12 | 132 | 46 | 158 | 2.43e-19 | 85.9 |
| MS.gene98828.t1 | MTR_5g015500 | 37.600 | 125 | 70 | 2 | 11 | 135 | 389 | 505 | 7.18e-19 | 90.5 |
| MS.gene98828.t1 | MTR_5g015500 | 37.600 | 125 | 70 | 2 | 11 | 135 | 349 | 465 | 8.53e-19 | 90.1 |
| MS.gene98828.t1 | MTR_2g085075 | 38.462 | 117 | 64 | 2 | 11 | 127 | 506 | 614 | 7.98e-18 | 87.4 |
| MS.gene98828.t1 | MTR_2g023120 | 44.000 | 125 | 60 | 5 | 12 | 134 | 58 | 174 | 4.37e-15 | 78.6 |
| MS.gene98828.t1 | MTR_7g095750 | 38.393 | 112 | 58 | 4 | 12 | 122 | 68 | 169 | 9.08e-15 | 77.8 |
| MS.gene98828.t1 | MTR_3g117750 | 40.496 | 121 | 61 | 5 | 11 | 130 | 71 | 181 | 2.25e-14 | 72.4 |
| MS.gene98828.t1 | MTR_7g116340 | 37.168 | 113 | 60 | 4 | 12 | 123 | 64 | 166 | 3.43e-14 | 71.2 |
| MS.gene98828.t1 | MTR_1g117010 | 39.823 | 113 | 58 | 4 | 11 | 122 | 132 | 235 | 2.54e-13 | 70.5 |
| MS.gene98828.t1 | MTR_1g117010 | 39.823 | 113 | 58 | 4 | 11 | 122 | 132 | 235 | 2.54e-13 | 70.5 |
| MS.gene98828.t1 | MTR_4g075290 | 42.202 | 109 | 52 | 6 | 15 | 122 | 67 | 165 | 3.50e-13 | 68.2 |
| MS.gene98828.t1 | MTR_3g463900 | 39.286 | 112 | 57 | 6 | 12 | 122 | 94 | 195 | 8.17e-12 | 65.1 |
| MS.gene98828.t1 | MTR_1g085560 | 37.795 | 127 | 60 | 8 | 12 | 133 | 138 | 250 | 1.10e-11 | 65.9 |
| MS.gene98828.t1 | MTR_4g086760 | 35.000 | 100 | 56 | 2 | 23 | 122 | 77 | 167 | 5.40e-11 | 64.3 |
| MS.gene98828.t1 | MTR_4g086760 | 35.000 | 100 | 56 | 2 | 23 | 122 | 77 | 167 | 5.55e-11 | 64.7 |
| MS.gene98828.t1 | MTR_4g086760 | 35.000 | 100 | 56 | 2 | 23 | 122 | 77 | 167 | 5.70e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98828.t1 | AT1G53720 | 64.583 | 480 | 134 | 8 | 2 | 470 | 28 | 482 | 0.0 | 575 |
| MS.gene98828.t1 | AT1G53720 | 83.849 | 291 | 47 | 0 | 13 | 303 | 47 | 337 | 0.0 | 520 |
| MS.gene98828.t1 | AT1G53780 | 50.222 | 225 | 92 | 3 | 43 | 267 | 3 | 207 | 7.32e-54 | 193 |
| MS.gene98828.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 62 | 267 | 1 | 186 | 1.50e-43 | 164 |
| MS.gene98828.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 62 | 267 | 1 | 186 | 1.50e-43 | 164 |
| MS.gene98828.t1 | AT1G53780 | 48.058 | 206 | 87 | 3 | 62 | 267 | 1 | 186 | 1.51e-43 | 164 |
| MS.gene98828.t1 | AT2G36130 | 44.444 | 117 | 57 | 3 | 12 | 128 | 55 | 163 | 4.05e-24 | 99.4 |
| MS.gene98828.t1 | AT1G01940 | 38.017 | 121 | 67 | 2 | 12 | 132 | 46 | 158 | 5.67e-19 | 84.7 |
| MS.gene98828.t1 | AT3G44600 | 39.316 | 117 | 63 | 2 | 11 | 127 | 520 | 628 | 4.72e-18 | 88.2 |
| MS.gene98828.t1 | AT4G33060 | 41.732 | 127 | 63 | 5 | 11 | 134 | 57 | 175 | 1.05e-17 | 86.7 |
| MS.gene98828.t1 | AT5G67530 | 36.885 | 122 | 69 | 2 | 11 | 132 | 388 | 501 | 8.15e-17 | 84.3 |
| MS.gene98828.t1 | AT2G21130 | 39.823 | 113 | 55 | 5 | 12 | 122 | 65 | 166 | 5.82e-15 | 73.6 |
| MS.gene98828.t1 | AT4G38740 | 39.831 | 118 | 58 | 6 | 7 | 122 | 59 | 165 | 8.26e-15 | 73.2 |
| MS.gene98828.t1 | AT5G13120 | 41.228 | 114 | 55 | 5 | 11 | 122 | 145 | 248 | 3.82e-14 | 73.2 |
| MS.gene98828.t1 | AT5G13120 | 41.228 | 114 | 55 | 5 | 11 | 122 | 141 | 244 | 4.38e-14 | 72.8 |
| MS.gene98828.t1 | AT3G56070 | 37.288 | 118 | 63 | 5 | 15 | 131 | 67 | 174 | 2.08e-13 | 69.3 |
| MS.gene98828.t1 | AT3G56070 | 37.288 | 118 | 63 | 5 | 15 | 131 | 67 | 174 | 2.08e-13 | 69.3 |
| MS.gene98828.t1 | AT3G63400 | 35.398 | 113 | 62 | 4 | 11 | 122 | 67 | 169 | 2.47e-13 | 73.2 |
| MS.gene98828.t1 | AT3G63400 | 35.398 | 113 | 62 | 4 | 11 | 122 | 67 | 169 | 2.47e-13 | 73.2 |
| MS.gene98828.t1 | AT3G63400 | 35.398 | 113 | 62 | 4 | 11 | 122 | 67 | 169 | 2.47e-13 | 73.2 |
| MS.gene98828.t1 | AT3G63400 | 35.398 | 113 | 62 | 4 | 11 | 122 | 67 | 169 | 3.11e-13 | 72.0 |
| MS.gene98828.t1 | AT2G16600 | 42.202 | 109 | 52 | 5 | 15 | 122 | 68 | 166 | 4.40e-13 | 68.2 |
| MS.gene98828.t1 | AT2G16600 | 41.284 | 109 | 48 | 5 | 14 | 122 | 52 | 144 | 2.87e-12 | 65.1 |
| MS.gene98828.t1 | AT2G15790 | 33.628 | 113 | 65 | 3 | 11 | 122 | 64 | 167 | 1.64e-11 | 66.6 |
| MS.gene98828.t1 | AT3G26420 | 27.500 | 240 | 126 | 6 | 207 | 414 | 5 | 228 | 2.12e-11 | 64.7 |
Find 129 sgRNAs with CRISPR-Local
Find 331 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATACATGCGGAAAGATAATA+AGG | 0.255757 | 6.1:+73817701 | MS.gene98828:CDS |
| TGGTGTTTCGTTTCTCTCTT+TGG | 0.263367 | 6.1:-73818105 | None:intergenic |
| GAAAGACAGAGAAAGGAATA+TGG | 0.266494 | 6.1:+73818335 | MS.gene98828:CDS |
| TTTCCTTCTGGTGAAGCTTC+AGG | 0.292417 | 6.1:-73815176 | None:intergenic |
| CCTTTCTCTGTCTTTCTTGT+CGG | 0.295130 | 6.1:-73818328 | None:intergenic |
| CGTTTGTAATCATCGCCATC+TGG | 0.307386 | 6.1:-73818579 | None:intergenic |
| GATCAAAGGAAGCACATTCT+AGG | 0.318080 | 6.1:+73816234 | MS.gene98828:CDS |
| TGCTTTATCTCCACCCCGTT+GGG | 0.336670 | 6.1:-73817958 | None:intergenic |
| AGTTTATGCTATGCTTTCAT+AGG | 0.347181 | 6.1:+73816738 | MS.gene98828:CDS |
| CAAGATGTGAAGGTTGATTC+TGG | 0.347476 | 6.1:+73818540 | MS.gene98828:CDS |
| GGAGGGATGACCGAGATTAT+AGG | 0.351226 | 6.1:+73818493 | MS.gene98828:CDS |
| TTCTTGTCGGCATGAAAATC+CGG | 0.400986 | 6.1:-73818315 | None:intergenic |
| GATGACCTTGATTACCTTGA+CGG | 0.406436 | 6.1:+73814598 | MS.gene98828:CDS |
| CATGTATTGTGACCACAGTT+TGG | 0.414774 | 6.1:-73817685 | None:intergenic |
| GAAGATGTGAAGATTGATTC+CGG | 0.425382 | 6.1:+73818627 | MS.gene98828:CDS |
| GAAGGACAATAATGCCCAAC+GGG | 0.426794 | 6.1:+73817944 | MS.gene98828:CDS |
| GACAGAGTTCGAAGACAAAC+TGG | 0.432726 | 6.1:+73817103 | MS.gene98828:intron |
| TTCATGGTGTAGATACGAAA+TGG | 0.436440 | 6.1:+73818056 | MS.gene98828:intron |
| TGAGTTTAATTGTTCATCCA+TGG | 0.436450 | 6.1:-73816189 | None:intergenic |
| TCATAGAGGTCGTAGGGATC+AGG | 0.444751 | 6.1:+73818191 | MS.gene98828:CDS |
| GGGAAGGTCGTGAACATAGA+AGG | 0.446283 | 6.1:+73818721 | MS.gene98828:CDS |
| GAAAACGAAGCCTGGATGAT+GGG | 0.454580 | 6.1:+73818655 | MS.gene98828:CDS |
| CCTACTGGAACTGGCACTGC+TGG | 0.458406 | 6.1:+73813894 | MS.gene98828:CDS |
| GATCATCAAAAGGATCTTCC+AGG | 0.462705 | 6.1:-73815130 | None:intergenic |
| AGATTACCCACCTCAGTAAC+CGG | 0.469687 | 6.1:-73816431 | None:intergenic |
| CAGGCTCGAATAACAGAGAT+AGG | 0.473703 | 6.1:+73818220 | MS.gene98828:CDS |
| ACTGGTGATCCTACTGGAAC+TGG | 0.474821 | 6.1:+73813885 | MS.gene98828:CDS |
| GGAGGTTTAACCTCAGCATC+TGG | 0.475544 | 6.1:-73816377 | None:intergenic |
| CAGTTCTCTTCCTATAATCT+CGG | 0.479487 | 6.1:-73818503 | None:intergenic |
| AAAGACAGAGAAAGGAATAT+GGG | 0.483710 | 6.1:+73818336 | MS.gene98828:CDS |
| AGCAGAGGGCTTGAAGGAAA+CGG | 0.483995 | 6.1:+73818255 | MS.gene98828:CDS |
| GGAAAGAGGTGCAAGAGATC+CGG | 0.484681 | 6.1:+73818296 | MS.gene98828:CDS |
| GAGTTTAATTGTTCATCCAT+GGG | 0.486671 | 6.1:-73816188 | None:intergenic |
| GATCTAAAGCATTCTAAGAC+TGG | 0.487196 | 6.1:+73814351 | MS.gene98828:CDS |
| AGAGAACTGAAGACAGTGTA+AGG | 0.488015 | 6.1:+73818517 | MS.gene98828:CDS |
| AGAAAACGAAGCCTGGATGA+TGG | 0.488745 | 6.1:+73818654 | MS.gene98828:CDS |
| GAGGCTTATGCCGATGGAAA+GGG | 0.489014 | 6.1:+73814962 | MS.gene98828:CDS |
| GCGATGATTACAAACGTAGA+AGG | 0.490035 | 6.1:+73818586 | MS.gene98828:CDS |
| CGGAGATGATAAAGCGGGAC+TGG | 0.492772 | 6.1:+73818275 | MS.gene98828:CDS |
| TTGCTTTATCTCCACCCCGT+TGG | 0.493840 | 6.1:-73817959 | None:intergenic |
| TCCTATGTCTGTAATCCTCA+TGG | 0.495780 | 6.1:-73818698 | None:intergenic |
| GACTTTGACTAGAATTAATG+AGG | 0.499789 | 6.1:+73814943 | MS.gene98828:CDS |
| GATAGAAGCAGAGGGCTTGA+AGG | 0.500538 | 6.1:+73818249 | MS.gene98828:CDS |
| GGTCATCCCTTTCATATCGC+TGG | 0.507902 | 6.1:-73818125 | None:intergenic |
| AGAGAATTTGAATGCTTCAC+AGG | 0.509447 | 6.1:+73814398 | MS.gene98828:CDS |
| CGGACGAAGAAAACGAAGCC+TGG | 0.509886 | 6.1:+73818647 | MS.gene98828:CDS |
| GACGGGCTAGTCGAGATGAT+AGG | 0.512324 | 6.1:+73818442 | MS.gene98828:CDS |
| TGAAGAGGTTATTAGATCAA+AGG | 0.514059 | 6.1:+73816220 | MS.gene98828:CDS |
| AAGTCCGACTTGAAGATGAT+TGG | 0.517976 | 6.1:+73816162 | MS.gene98828:CDS |
| AGATGCTGAGGTTAAACCTC+CGG | 0.521540 | 6.1:+73816379 | MS.gene98828:CDS |
| GGTCATCCCTCCTATCCAAA+TGG | 0.522011 | 6.1:-73818482 | None:intergenic |
| TGAGGCTTATGCCGATGGAA+AGG | 0.522232 | 6.1:+73814961 | MS.gene98828:CDS |
| CCGACAAGAAAGACAGAGAA+AGG | 0.522500 | 6.1:+73818328 | MS.gene98828:CDS |
| AGCTGAGGAGGATCATCAAA+AGG | 0.523659 | 6.1:-73815140 | None:intergenic |
| AAATGGTCTTCCCTTTCCAT+CGG | 0.529485 | 6.1:-73814972 | None:intergenic |
| AAGGATTTCACTGCTCAGAC+TGG | 0.532033 | 6.1:+73813867 | MS.gene98828:intron |
| AGACAAACTGGCATGTGAGC+AGG | 0.532699 | 6.1:+73817115 | MS.gene98828:CDS |
| GTTCCACTGATCATATTGCT+AGG | 0.534319 | 6.1:+73817874 | MS.gene98828:CDS |
| ATCAAAGGAAGCACATTCTA+GGG | 0.534373 | 6.1:+73816235 | MS.gene98828:CDS |
| GTTTGTAATCCCCATCATCC+AGG | 0.535057 | 6.1:-73818665 | None:intergenic |
| ATGACAGCCATTTGGATAGG+AGG | 0.535172 | 6.1:+73818475 | MS.gene98828:CDS |
| ATGATAGTCATAGAGGTCGT+AGG | 0.538687 | 6.1:+73818184 | MS.gene98828:CDS |
| GCTTTCCGTCAAGGTAATCA+AGG | 0.538704 | 6.1:-73814603 | None:intergenic |
| GCTCAGACTGGTGATCCTAC+TGG | 0.539336 | 6.1:+73813879 | MS.gene98828:CDS |
| ATCATTCGTGATCACAAGAC+TGG | 0.543603 | 6.1:+73816711 | MS.gene98828:CDS |
| ACCCACAAAATTTATCATGA+AGG | 0.545661 | 6.1:+73817926 | MS.gene98828:CDS |
| TTACTGTATGCTTTCCGTCA+AGG | 0.548412 | 6.1:-73814612 | None:intergenic |
| TTTAAAGATGATAGTCATAG+AGG | 0.548618 | 6.1:+73818177 | MS.gene98828:CDS |
| AGGTCGTAGGGATCAGGAGA+TGG | 0.548677 | 6.1:+73818197 | MS.gene98828:CDS |
| ATGCTTTGATTGATGATCGA+AGG | 0.550568 | 6.1:+73817634 | MS.gene98828:CDS |
| ATTCCTGAAGCTTCACCAGA+AGG | 0.553060 | 6.1:+73815173 | MS.gene98828:CDS |
| ATTAATGAGGCTTATGCCGA+TGG | 0.553811 | 6.1:+73814956 | MS.gene98828:CDS |
| GACAATAATGCCCAACGGGG+TGG | 0.555935 | 6.1:+73817948 | MS.gene98828:CDS |
| TGAAGATGATTGGGTGCCCA+TGG | 0.556542 | 6.1:+73816172 | MS.gene98828:CDS |
| AGAAGAAAACGAAGCCCAGA+TGG | 0.556598 | 6.1:+73818564 | MS.gene98828:CDS |
| CGAAACACCAGCGATATGAA+AGG | 0.557586 | 6.1:+73818118 | MS.gene98828:CDS |
| AATCAAGCACACTTACATCC+TGG | 0.562265 | 6.1:+73815112 | MS.gene98828:CDS |
| TTCCACTGATCATATTGCTA+GGG | 0.563783 | 6.1:+73817875 | MS.gene98828:CDS |
| CAGTGTAAGGCAAGATGTGA+AGG | 0.563971 | 6.1:+73818530 | MS.gene98828:CDS |
| TGACAGCCATTTGGATAGGA+GGG | 0.564950 | 6.1:+73818476 | MS.gene98828:CDS |
| GAAACACCAGCGATATGAAA+GGG | 0.564974 | 6.1:+73818119 | MS.gene98828:CDS |
| CGTAGGGATCAGGAGATGGC+AGG | 0.568227 | 6.1:+73818201 | MS.gene98828:CDS |
| TGATAGTCATAGAGGTCGTA+GGG | 0.569876 | 6.1:+73818185 | MS.gene98828:CDS |
| ATTCTCTCCTGCACTAGCCA+TGG | 0.569975 | 6.1:-73814382 | None:intergenic |
| AGTCCGACTTGAAGATGATT+GGG | 0.570247 | 6.1:+73816163 | MS.gene98828:CDS |
| CATATTGCTAGGGATTGCAC+TGG | 0.570802 | 6.1:+73817885 | MS.gene98828:CDS |
| GTTTGTAATCATCGCCATCT+GGG | 0.573839 | 6.1:-73818578 | None:intergenic |
| GATAAAGCGGGACTGGAAAG+AGG | 0.576342 | 6.1:+73818282 | MS.gene98828:CDS |
| TACATGCGGAAAGATAATAA+GGG | 0.576638 | 6.1:+73817702 | MS.gene98828:CDS |
| ATGATAAATACACAGAAAGA+CGG | 0.577626 | 6.1:+73818424 | MS.gene98828:CDS |
| GGAAACGGAGATGATAAAGC+GGG | 0.583781 | 6.1:+73818270 | MS.gene98828:CDS |
| TGATAAATACACAGAAAGAC+GGG | 0.584231 | 6.1:+73818425 | MS.gene98828:CDS |
| CAGATGACAGCCATTTGGAT+AGG | 0.587905 | 6.1:+73818472 | MS.gene98828:CDS |
| AGCGATATGAAAGGGATGAC+CGG | 0.593576 | 6.1:+73818127 | MS.gene98828:CDS |
| ATCCCTAGCAATATGATCAG+TGG | 0.596232 | 6.1:-73817877 | None:intergenic |
| AGGAAACGGAGATGATAAAG+CGG | 0.596287 | 6.1:+73818269 | MS.gene98828:CDS |
| AGGTATCGCGATAGAAGCAG+AGG | 0.597484 | 6.1:+73818240 | MS.gene98828:CDS |
| ATGGGGATTACAAACGTGGA+AGG | 0.597862 | 6.1:+73818673 | MS.gene98828:CDS |
| AGTCTAGCTCATCTTTCCGT+CGG | 0.602521 | 6.1:-73818383 | None:intergenic |
| AAAACGAAGCCTGGATGATG+GGG | 0.602978 | 6.1:+73818656 | MS.gene98828:CDS |
| ATGAACTCAGGTAGCTGAGG+AGG | 0.602991 | 6.1:-73815152 | None:intergenic |
| ATGAGGATTACAGACATAGG+AGG | 0.605188 | 6.1:+73818700 | MS.gene98828:CDS |
| ACTGTTGCCATGGCTAGTGC+AGG | 0.608593 | 6.1:+73814375 | MS.gene98828:CDS |
| TGGGGATATTCCAGATGCTG+AGG | 0.610469 | 6.1:+73816367 | MS.gene98828:CDS |
| TAAGACTGGAACTGTTGCCA+TGG | 0.613040 | 6.1:+73814365 | MS.gene98828:CDS |
| GTCAAAGTGTTGCCAAACTG+TGG | 0.614229 | 6.1:+73817673 | MS.gene98828:CDS |
| AACTGTGGTCACAATACATG+CGG | 0.620072 | 6.1:+73817688 | MS.gene98828:CDS |
| ATGGATGAACAATTAAACTC+AGG | 0.621079 | 6.1:+73816191 | MS.gene98828:CDS |
| GATTACAGACATAGGAGGGA+AGG | 0.622385 | 6.1:+73818705 | MS.gene98828:CDS |
| GGTGGTGGTTGCTTCAAATG+TGG | 0.622769 | 6.1:+73817852 | MS.gene98828:intron |
| AAACTCAGGAGAACTTGAAG+AGG | 0.629240 | 6.1:+73816205 | MS.gene98828:CDS |
| GAAGCTTCAGGAATGAACTC+AGG | 0.635520 | 6.1:-73815164 | None:intergenic |
| TGGGGATTACAAACGTGGAA+GGG | 0.636249 | 6.1:+73818674 | MS.gene98828:CDS |
| AACGGGGTGGAGATAAAGCA+AGG | 0.636526 | 6.1:+73817961 | MS.gene98828:CDS |
| CCAGCAGTGCCAGTTCCAGT+AGG | 0.645974 | 6.1:-73813894 | None:intergenic |
| TAAATTGAATCCGGTTACTG+AGG | 0.648422 | 6.1:+73816421 | MS.gene98828:CDS |
| GGAATGAACTCAGGTAGCTG+AGG | 0.654315 | 6.1:-73815155 | None:intergenic |
| TGAAGGACAATAATGCCCAA+CGG | 0.661625 | 6.1:+73817943 | MS.gene98828:CDS |
| TGAGGATTACAGACATAGGA+GGG | 0.662466 | 6.1:+73818701 | MS.gene98828:CDS |
| ACCATGAGGATTACAGACAT+AGG | 0.668184 | 6.1:+73818697 | MS.gene98828:CDS |
| GCACCCAATCATCTTCAAGT+CGG | 0.669949 | 6.1:-73816166 | None:intergenic |
| CAAACGTAGAAGGAATGATG+AGG | 0.682353 | 6.1:+73818596 | MS.gene98828:CDS |
| GATGATGGGGATTACAAACG+TGG | 0.687670 | 6.1:+73818669 | MS.gene98828:CDS |
| TGATGATCGAAGGATACATG+TGG | 0.693355 | 6.1:+73817644 | MS.gene98828:CDS |
| GGTATCGCGATAGAAGCAGA+GGG | 0.706809 | 6.1:+73818241 | MS.gene98828:CDS |
| ATAGAGACGATGACTACCGA+CGG | 0.712917 | 6.1:+73818367 | MS.gene98828:CDS |
| AGAAGGAAAACCTAAAGACG+AGG | 0.723882 | 6.1:+73815190 | MS.gene98828:CDS |
| CAAACGTGGAAGGGACCATG+AGG | 0.747318 | 6.1:+73818683 | MS.gene98828:CDS |
| AAGGACAATAATGCCCAACG+GGG | 0.775217 | 6.1:+73817945 | MS.gene98828:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAGAAATTAATGAATTA+GGG | - | chr6.1:73813943-73813962 | None:intergenic | 10.0% |
| !! | AATTGAAAATTATAAATTCC+TGG | - | chr6.1:73816815-73816834 | None:intergenic | 15.0% |
| !! | ACATTTATTAGTAGTAAAAA+AGG | - | chr6.1:73815018-73815037 | None:intergenic | 15.0% |
| !! | ATTAGGATTAAGTATTATAA+TGG | + | chr6.1:73813822-73813841 | MS.gene98828:intron | 15.0% |
| !! | CTGAAATTAAACAAATTAAT+CGG | - | chr6.1:73815847-73815866 | None:intergenic | 15.0% |
| !! | GTAAAAGAAATTAATGAATT+AGG | - | chr6.1:73813944-73813963 | None:intergenic | 15.0% |
| !! | TTAGGATTAAGTATTATAAT+GGG | + | chr6.1:73813823-73813842 | MS.gene98828:intron | 15.0% |
| !!! | TGTTTTATACTTTCATTTTA+TGG | + | chr6.1:73817747-73817766 | MS.gene98828:intron | 15.0% |
| !!! | TTGTTGTTTTTTTTGTTATT+AGG | + | chr6.1:73813805-73813824 | MS.gene98828:intron | 15.0% |
| !!! | TTTGAATGGATTATATTTAT+CGG | + | chr6.1:73815266-73815285 | MS.gene98828:intron | 15.0% |
| !!! | TTTTTTACTACTAATAAATG+TGG | + | chr6.1:73815017-73815036 | MS.gene98828:intron | 15.0% |
| !! | AAATGCAATATTACATAAGA+TGG | - | chr6.1:73817320-73817339 | None:intergenic | 20.0% |
| !! | ATCACATTTCACAAAAAATA+GGG | - | chr6.1:73815912-73815931 | None:intergenic | 20.0% |
| !! | ATTACTTAGGAAAAAAAAAC+AGG | - | chr6.1:73817170-73817189 | None:intergenic | 20.0% |
| !! | CATAAATTATTGTATCAACA+TGG | - | chr6.1:73817826-73817845 | None:intergenic | 20.0% |
| !! | CCATTTAATGACAAAAAAAT+CGG | - | chr6.1:73816850-73816869 | None:intergenic | 20.0% |
| !! | TAATCAAGTTAAGAAAAATG+AGG | - | chr6.1:73815374-73815393 | None:intergenic | 20.0% |
| !! | TAGTTAAGTTTGATAAATGT+GGG | + | chr6.1:73815457-73815476 | MS.gene98828:intron | 20.0% |
| !! | TATCACATTTCACAAAAAAT+AGG | - | chr6.1:73815913-73815932 | None:intergenic | 20.0% |
| !! | TTAGTTAAGTTTGATAAATG+TGG | + | chr6.1:73815456-73815475 | MS.gene98828:intron | 20.0% |
| !!! | ACCTAAAATATTTGATGATA+GGG | + | chr6.1:73816683-73816702 | MS.gene98828:intron | 20.0% |
| !!! | ATTTCATAATTGTGTTTTCT+AGG | + | chr6.1:73813976-73813995 | MS.gene98828:intron | 20.0% |
| !!! | TAGTTTTAAGAGGAATTAAA+AGG | + | chr6.1:73816905-73816924 | MS.gene98828:intron | 20.0% |
| !!! | TCGTTTTCTCAAAATTTTAT+TGG | - | chr6.1:73814134-73814153 | None:intergenic | 20.0% |
| !!! | TGATTTTCTCTTTAAAATAC+AGG | + | chr6.1:73816541-73816560 | MS.gene98828:intron | 20.0% |
| !!! | TTTCATAATTGTGTTTTCTA+GGG | + | chr6.1:73813977-73813996 | MS.gene98828:intron | 20.0% |
| !!! | TTTCTTCCTTATTTTAGATT+GGG | + | chr6.1:73816348-73816367 | MS.gene98828:intron | 20.0% |
| ! | AAATTATTGTATCAACATGG+AGG | - | chr6.1:73817823-73817842 | None:intergenic | 25.0% |
| ! | AATGTGTCTGAAAAAATAAC+AGG | - | chr6.1:73815411-73815430 | None:intergenic | 25.0% |
| ! | AATTATTGTATCAACATGGA+GGG | - | chr6.1:73817822-73817841 | None:intergenic | 25.0% |
| ! | AGCTATATATAAGCTTATCA+AGG | - | chr6.1:73817270-73817289 | None:intergenic | 25.0% |
| ! | ATACAATAATTTATGACTGC+AGG | + | chr6.1:73817831-73817850 | MS.gene98828:intron | 25.0% |
| ! | ATGACAACATCATCTATATA+TGG | + | chr6.1:73815990-73816009 | MS.gene98828:intron | 25.0% |
| ! | ATGATAAATACACAGAAAGA+CGG | + | chr6.1:73818424-73818443 | MS.gene98828:CDS | 25.0% |
| ! | GAAGACCATTTAAAAATATC+CGG | + | chr6.1:73814984-73815003 | MS.gene98828:CDS | 25.0% |
| ! | TAAATATGAATGGGTAAAGA+AGG | - | chr6.1:73816487-73816506 | None:intergenic | 25.0% |
| ! | TCACATTTCACAAAAAATAG+GGG | - | chr6.1:73815911-73815930 | None:intergenic | 25.0% |
| ! | TGAAAGAATACCTTGATATA+TGG | - | chr6.1:73815659-73815678 | None:intergenic | 25.0% |
| ! | TTAATGATCTCGTAATAGAA+AGG | - | chr6.1:73815296-73815315 | None:intergenic | 25.0% |
| ! | TTCTCACTAATAAGTCTAAA+AGG | - | chr6.1:73816873-73816892 | None:intergenic | 25.0% |
| ! | TTTAAAGATGATAGTCATAG+AGG | + | chr6.1:73818177-73818196 | MS.gene98828:CDS | 25.0% |
| ! | TTTGTTTCATACTGTTCAAA+AGG | + | chr6.1:73813848-73813867 | MS.gene98828:intron | 25.0% |
| !! | AAAAACTTATTTCTCCTTCA+TGG | + | chr6.1:73817589-73817608 | MS.gene98828:intron | 25.0% |
| !! | AATATCCCCAATCTAAAATA+AGG | - | chr6.1:73816357-73816376 | None:intergenic | 25.0% |
| !! | AGTTATTTGTTTGGTTTCTA+AGG | + | chr6.1:73814876-73814895 | MS.gene98828:intron | 25.0% |
| !! | CAATCTAAAATAAGGAAGAA+AGG | - | chr6.1:73816349-73816368 | None:intergenic | 25.0% |
| !! | CACCTAAAATATTTGATGAT+AGG | + | chr6.1:73816682-73816701 | MS.gene98828:intron | 25.0% |
| !! | CTTTATACAAGCTTTATACA+AGG | - | chr6.1:73814498-73814517 | None:intergenic | 25.0% |
| !! | TAATAAATGTGGATTGATAG+AGG | + | chr6.1:73815028-73815047 | MS.gene98828:intron | 25.0% |
| !! | TAATCTTTTATGCTCTGTTA+TGG | + | chr6.1:73816448-73816467 | MS.gene98828:intron | 25.0% |
| !! | TCCTTCATGATAAATTTTGT+GGG | - | chr6.1:73817930-73817949 | None:intergenic | 25.0% |
| !! | TGTTTTATGACCATATATCA+AGG | + | chr6.1:73815646-73815665 | MS.gene98828:intron | 25.0% |
| !! | TTTGTTATCCTGTTTCAATT+TGG | + | chr6.1:73817458-73817477 | MS.gene98828:intron | 25.0% |
| !! | TTTTGTCTGTAAATTGAATC+CGG | + | chr6.1:73816412-73816431 | MS.gene98828:CDS | 25.0% |
| !!! | ACAAACCGGATATTTTTAAA+TGG | - | chr6.1:73814992-73815011 | None:intergenic | 25.0% |
| !!! | ATTTTTCAGGTTTCTTTATG+GGG | + | chr6.1:73814293-73814312 | MS.gene98828:intron | 25.0% |
| !!! | CATAATTTTAACACAGATTC+TGG | - | chr6.1:73816777-73816796 | None:intergenic | 25.0% |
| !!! | CCGATTTTTTTGTCATTAAA+TGG | + | chr6.1:73816847-73816866 | MS.gene98828:intron | 25.0% |
| !!! | CTTTCTTCCTTATTTTAGAT+TGG | + | chr6.1:73816347-73816366 | MS.gene98828:intron | 25.0% |
| !!! | GATTTTTCAGGTTTCTTTAT+GGG | + | chr6.1:73814292-73814311 | MS.gene98828:intron | 25.0% |
| !!! | GTGATTTTTTCTCTTTCAAT+TGG | - | chr6.1:73815348-73815367 | None:intergenic | 25.0% |
| !!! | TGATTTTTCAGGTTTCTTTA+TGG | + | chr6.1:73814291-73814310 | MS.gene98828:intron | 25.0% |
| !!! | TTCTTCCTTATTTTAGATTG+GGG | + | chr6.1:73816349-73816368 | MS.gene98828:intron | 25.0% |
| !!! | TTTATTTTTTCACCTAGTTC+AGG | + | chr6.1:73815870-73815889 | MS.gene98828:intron | 25.0% |
| AAAGACAGAGAAAGGAATAT+GGG | + | chr6.1:73818336-73818355 | MS.gene98828:CDS | 30.0% | |
| AAAGAGAGACGATATTACTT+AGG | - | chr6.1:73817183-73817202 | None:intergenic | 30.0% | |
| AAGAAACCTGAAAAATCAGA+AGG | - | chr6.1:73814289-73814308 | None:intergenic | 30.0% | |
| AAGCATACAGTAAGTATTCT+AGG | + | chr6.1:73814622-73814641 | MS.gene98828:intron | 30.0% | |
| AATAAACCTACTAAAACGTC+TGG | - | chr6.1:73817243-73817262 | None:intergenic | 30.0% | |
| ACCCACAAAATTTATCATGA+AGG | + | chr6.1:73817926-73817945 | MS.gene98828:CDS | 30.0% | |
| AGTTTATGCTATGCTTTCAT+AGG | + | chr6.1:73816738-73816757 | MS.gene98828:CDS | 30.0% | |
| ATACATGCGGAAAGATAATA+AGG | + | chr6.1:73817701-73817720 | MS.gene98828:CDS | 30.0% | |
| ATAGCTTACAAAATCTTCCT+TGG | + | chr6.1:73817284-73817303 | MS.gene98828:intron | 30.0% | |
| ATGGATGAACAATTAAACTC+AGG | + | chr6.1:73816191-73816210 | MS.gene98828:CDS | 30.0% | |
| ATTTCACAAAAAATAGGGGA+GGG | - | chr6.1:73815907-73815926 | None:intergenic | 30.0% | |
| GACTTTGACTAGAATTAATG+AGG | + | chr6.1:73814943-73814962 | MS.gene98828:CDS | 30.0% | |
| GAGTTTAATTGTTCATCCAT+GGG | - | chr6.1:73816191-73816210 | None:intergenic | 30.0% | |
| GTATGATAAAAAAGGTAGGA+AGG | + | chr6.1:73818149-73818168 | MS.gene98828:CDS | 30.0% | |
| TACATGCGGAAAGATAATAA+GGG | + | chr6.1:73817702-73817721 | MS.gene98828:CDS | 30.0% | |
| TACTGTCGAAGTTATTTGTT+TGG | + | chr6.1:73814867-73814886 | MS.gene98828:intron | 30.0% | |
| TGAAGAGGTTATTAGATCAA+AGG | + | chr6.1:73816220-73816239 | MS.gene98828:CDS | 30.0% | |
| TGAGTTTAATTGTTCATCCA+TGG | - | chr6.1:73816192-73816211 | None:intergenic | 30.0% | |
| TGATAAATACACAGAAAGAC+GGG | + | chr6.1:73818425-73818444 | MS.gene98828:CDS | 30.0% | |
| TGTAAGTGTTCATACTTGAT+AGG | - | chr6.1:73814103-73814122 | None:intergenic | 30.0% | |
| TTGTCACTGTATGACTAATT+TGG | + | chr6.1:73815961-73815980 | MS.gene98828:intron | 30.0% | |
| ! | AGATACGAAATGGTTTTTGA+TGG | + | chr6.1:73818066-73818085 | MS.gene98828:intron | 30.0% |
| ! | AGTAAAAAAGGAGTACAAAC+CGG | - | chr6.1:73815006-73815025 | None:intergenic | 30.0% |
| ! | ATGGATTGAATGAATACGTT+GGG | + | chr6.1:73816009-73816028 | MS.gene98828:intron | 30.0% |
| ! | CAGACAAAAAGTACATTATC+CGG | - | chr6.1:73816401-73816420 | None:intergenic | 30.0% |
| ! | CGACTAAATGCAATTTTACT+AGG | + | chr6.1:73816130-73816149 | MS.gene98828:intron | 30.0% |
| ! | CTTTTATGGTATCCAAACTA+GGG | + | chr6.1:73815488-73815507 | MS.gene98828:intron | 30.0% |
| ! | GCCCTATCATCAAATATTTT+AGG | - | chr6.1:73816687-73816706 | None:intergenic | 30.0% |
| ! | GTCCTTCATGATAAATTTTG+TGG | - | chr6.1:73817931-73817950 | None:intergenic | 30.0% |
| ! | TAATATCGTCTCTCTTTTTC+TGG | + | chr6.1:73817186-73817205 | MS.gene98828:intron | 30.0% |
| ! | TATGGATTGAATGAATACGT+TGG | + | chr6.1:73816008-73816027 | MS.gene98828:intron | 30.0% |
| ! | TTCAATTTGGATTGACCTTT+TGG | + | chr6.1:73817471-73817490 | MS.gene98828:intron | 30.0% |
| !! | AGTCTTGGTTATTGTTGTTT+AGG | - | chr6.1:73817347-73817366 | None:intergenic | 30.0% |
| !! | TCTCTTTAAAATACAGGATG+AGG | + | chr6.1:73816547-73816566 | MS.gene98828:intron | 30.0% |
| !! | TGTTACTTTAGAGTCTGTTT+GGG | + | chr6.1:73815523-73815542 | MS.gene98828:intron | 30.0% |
| !!! | AGGCATATTTTAAGGTATGA+TGG | + | chr6.1:73817135-73817154 | MS.gene98828:intron | 30.0% |
| !!! | GATGTTGTCATTTTGTTCAA+CGG | + | chr6.1:73814263-73814282 | MS.gene98828:intron | 30.0% |
| !!! | TCCTACCTTTTTTATCATAC+CGG | - | chr6.1:73818149-73818168 | None:intergenic | 30.0% |
| !!! | TGCATCTTTGTAGTTTTAAG+AGG | + | chr6.1:73816895-73816914 | MS.gene98828:intron | 30.0% |
| AAAAACAGATGACAGCCATT+TGG | + | chr6.1:73818467-73818486 | MS.gene98828:CDS | 35.0% | |
| AAGATGGATAATGCTAACCA+AGG | - | chr6.1:73817304-73817323 | None:intergenic | 35.0% | |
| AATCCATTCAAAACGTTGCT+TGG | - | chr6.1:73815258-73815277 | None:intergenic | 35.0% | |
| AATCGTTGACAACCAAACAT+AGG | - | chr6.1:73817791-73817810 | None:intergenic | 35.0% | |
| ACCGGTATGATAAAAAAGGT+AGG | + | chr6.1:73818145-73818164 | MS.gene98828:CDS | 35.0% | |
| AGAGAATTTGAATGCTTCAC+AGG | + | chr6.1:73814398-73814417 | MS.gene98828:CDS | 35.0% | |
| AGGTCAATCCAAATTGAAAC+AGG | - | chr6.1:73817469-73817488 | None:intergenic | 35.0% | |
| CAATAATTTATGACTGCAGG+TGG | + | chr6.1:73817834-73817853 | MS.gene98828:intron | 35.0% | |
| CAGTTCTCTTCCTATAATCT+CGG | - | chr6.1:73818506-73818525 | None:intergenic | 35.0% | |
| CATTTCACAAAAAATAGGGG+AGG | - | chr6.1:73815908-73815927 | None:intergenic | 35.0% | |
| CCTAGTTTGGATACCATAAA+AGG | - | chr6.1:73815490-73815509 | None:intergenic | 35.0% | |
| CGTATCTACACCATGAAATT+GGG | - | chr6.1:73818053-73818072 | None:intergenic | 35.0% | |
| CTACCTCGGTAAATATGAAT+GGG | - | chr6.1:73816496-73816515 | None:intergenic | 35.0% | |
| GAAAACATTGAATGCTACCT+CGG | - | chr6.1:73816510-73816529 | None:intergenic | 35.0% | |
| GAAACAATCAAAGCAAGGAA+AGG | - | chr6.1:73814651-73814670 | None:intergenic | 35.0% | |
| GAAAGACAGAGAAAGGAATA+TGG | + | chr6.1:73818335-73818354 | MS.gene98828:CDS | 35.0% | |
| GAAGAAAGGCAGTTATACAA+AGG | - | chr6.1:73816335-73816354 | None:intergenic | 35.0% | |
| GATGACCGGTATGATAAAAA+AGG | + | chr6.1:73818141-73818160 | MS.gene98828:CDS | 35.0% | |
| GCTTGAGAAGTAATCTTGAT+TGG | + | chr6.1:73814225-73814244 | MS.gene98828:intron | 35.0% | |
| GTATCTACACCATGAAATTG+GGG | - | chr6.1:73818052-73818071 | None:intergenic | 35.0% | |
| GTGTCTGAAAAAATAACAGG+TGG | - | chr6.1:73815408-73815427 | None:intergenic | 35.0% | |
| TAAATTGAATCCGGTTACTG+AGG | + | chr6.1:73816421-73816440 | MS.gene98828:CDS | 35.0% | |
| TATCCTTCTGCATATCTATC+AGG | - | chr6.1:73815791-73815810 | None:intergenic | 35.0% | |
| TCGTATCTACACCATGAAAT+TGG | - | chr6.1:73818054-73818073 | None:intergenic | 35.0% | |
| TCTGTTCAAGTAATGCAAGA+TGG | - | chr6.1:73815093-73815112 | None:intergenic | 35.0% | |
| TGCAATCCAATACATCCAAA+AGG | - | chr6.1:73817489-73817508 | None:intergenic | 35.0% | |
| TTACCCATTCATATTTACCG+AGG | + | chr6.1:73816490-73816509 | MS.gene98828:intron | 35.0% | |
| TTCATGGTGTAGATACGAAA+TGG | + | chr6.1:73818056-73818075 | MS.gene98828:intron | 35.0% | |
| TTCCACTGATCATATTGCTA+GGG | + | chr6.1:73817875-73817894 | MS.gene98828:CDS | 35.0% | |
| TTTCCTGATAGATATGCAGA+AGG | + | chr6.1:73815785-73815804 | MS.gene98828:intron | 35.0% | |
| ! | AAGCTTCAAGAAGTTTTTGC+AGG | - | chr6.1:73813710-73813729 | None:intergenic | 35.0% |
| ! | AAGCTTTATACAAGGTTGTC+AGG | - | chr6.1:73814490-73814509 | None:intergenic | 35.0% |
| ! | ACAAAAAGTACATTATCCGG+AGG | - | chr6.1:73816398-73816417 | None:intergenic | 35.0% |
| ! | ACAAAATGCTAGCCTATGTT+TGG | + | chr6.1:73817776-73817795 | MS.gene98828:intron | 35.0% |
| ! | AGCTTTATACAAGGTTGTCA+GGG | - | chr6.1:73814489-73814508 | None:intergenic | 35.0% |
| ! | ATCAAAGGAAGCACATTCTA+GGG | + | chr6.1:73816235-73816254 | MS.gene98828:CDS | 35.0% |
| ! | ATGCTTTGATTGATGATCGA+AGG | + | chr6.1:73817634-73817653 | MS.gene98828:CDS | 35.0% |
| ! | ATGTGAGCAGGCATATTTTA+AGG | + | chr6.1:73817127-73817146 | MS.gene98828:CDS | 35.0% |
| ! | CAAGAAGTTTTTGCAGGTTA+AGG | - | chr6.1:73813704-73813723 | None:intergenic | 35.0% |
| ! | CACACAATATTTTCACGCTT+TGG | + | chr6.1:73816575-73816594 | MS.gene98828:CDS | 35.0% |
| ! | CCTTTTATGGTATCCAAACT+AGG | + | chr6.1:73815487-73815506 | MS.gene98828:intron | 35.0% |
| ! | GAAGATGTGAAGATTGATTC+CGG | + | chr6.1:73818627-73818646 | MS.gene98828:CDS | 35.0% |
| ! | GATTGACCTTTTGGATGTAT+TGG | + | chr6.1:73817480-73817499 | MS.gene98828:intron | 35.0% |
| ! | GGTTTTTGATGGAGATAACA+CGG | + | chr6.1:73818077-73818096 | MS.gene98828:CDS | 35.0% |
| !! | ATGCAATTTCAAGTTCATCC+AGG | + | chr6.1:73816794-73816813 | MS.gene98828:intron | 35.0% |
| !! | CAAACAGACTCTAAAGTAAC+AGG | - | chr6.1:73815524-73815543 | None:intergenic | 35.0% |
| !! | CTGTTACTTTAGAGTCTGTT+TGG | + | chr6.1:73815522-73815541 | MS.gene98828:intron | 35.0% |
| !! | GATCTAAAGCATTCTAAGAC+TGG | + | chr6.1:73814351-73814370 | MS.gene98828:CDS | 35.0% |
| !! | TAACCAAGCAACGTTTTGAA+TGG | + | chr6.1:73815252-73815271 | MS.gene98828:intron | 35.0% |
| !!! | AGGTATGACATTGATTTTGG+TGG | + | chr6.1:73814418-73814437 | MS.gene98828:intron | 35.0% |
| !!! | ATTTTTTCACCTAGTTCAGG+AGG | + | chr6.1:73815873-73815892 | MS.gene98828:intron | 35.0% |
| !!! | CACAGGTATGACATTGATTT+TGG | + | chr6.1:73814415-73814434 | MS.gene98828:intron | 35.0% |
| !!! | TTTTTTCACCTAGTTCAGGA+GGG | + | chr6.1:73815874-73815893 | MS.gene98828:intron | 35.0% |
| AAACTCAGGAGAACTTGAAG+AGG | + | chr6.1:73816205-73816224 | MS.gene98828:CDS | 40.0% | |
| AAATGGTCTTCCCTTTCCAT+CGG | - | chr6.1:73814975-73814994 | None:intergenic | 40.0% | |
| AACGAATGACCCCAATTTCA+TGG | + | chr6.1:73818040-73818059 | MS.gene98828:intron | 40.0% | |
| AATCAAGCACACTTACATCC+TGG | + | chr6.1:73815112-73815131 | MS.gene98828:CDS | 40.0% | |
| ACCATGAGGATTACAGACAT+AGG | + | chr6.1:73818697-73818716 | MS.gene98828:CDS | 40.0% | |
| AGAAGGAAAACCTAAAGACG+AGG | + | chr6.1:73815190-73815209 | MS.gene98828:CDS | 40.0% | |
| AGAGAACTGAAGACAGTGTA+AGG | + | chr6.1:73818517-73818536 | MS.gene98828:CDS | 40.0% | |
| AGGAAACGGAGATGATAAAG+CGG | + | chr6.1:73818269-73818288 | MS.gene98828:CDS | 40.0% | |
| ATCATTCGTGATCACAAGAC+TGG | + | chr6.1:73816711-73816730 | MS.gene98828:CDS | 40.0% | |
| ATCCCTAGCAATATGATCAG+TGG | - | chr6.1:73817880-73817899 | None:intergenic | 40.0% | |
| ATGAGGATTACAGACATAGG+AGG | + | chr6.1:73818700-73818719 | MS.gene98828:CDS | 40.0% | |
| ATGATAGTCATAGAGGTCGT+AGG | + | chr6.1:73818184-73818203 | MS.gene98828:CDS | 40.0% | |
| ATTAATGAGGCTTATGCCGA+TGG | + | chr6.1:73814956-73814975 | MS.gene98828:CDS | 40.0% | |
| ATTACCCCTTTCACAATTGC+AGG | - | chr6.1:73817035-73817054 | None:intergenic | 40.0% | |
| ATTGGGGTCATTCGTTAGAA+CGG | - | chr6.1:73818036-73818055 | None:intergenic | 40.0% | |
| CAAACGTAGAAGGAATGATG+AGG | + | chr6.1:73818596-73818615 | MS.gene98828:CDS | 40.0% | |
| CAAGACTTATCCCACTAAGT+GGG | + | chr6.1:73817360-73817379 | MS.gene98828:intron | 40.0% | |
| CCTTTCTCTGTCTTTCTTGT+CGG | - | chr6.1:73818331-73818350 | None:intergenic | 40.0% | |
| CTTGCTTTGATTGTTTCGCA+GGG | + | chr6.1:73814654-73814673 | MS.gene98828:intron | 40.0% | |
| GAAAACCTAAAGACGAGGTA+AGG | + | chr6.1:73815195-73815214 | MS.gene98828:intron | 40.0% | |
| GAAACACCAGCGATATGAAA+GGG | + | chr6.1:73818119-73818138 | MS.gene98828:CDS | 40.0% | |
| GATCATCAAAAGGATCTTCC+AGG | - | chr6.1:73815133-73815152 | None:intergenic | 40.0% | |
| GATGACCTTGATTACCTTGA+CGG | + | chr6.1:73814598-73814617 | MS.gene98828:CDS | 40.0% | |
| GCGATGATTACAAACGTAGA+AGG | + | chr6.1:73818586-73818605 | MS.gene98828:CDS | 40.0% | |
| GCTACCTCGGTAAATATGAA+TGG | - | chr6.1:73816497-73816516 | None:intergenic | 40.0% | |
| GTTAGAACGGACATAATCAC+AGG | - | chr6.1:73818023-73818042 | None:intergenic | 40.0% | |
| GTTCCACTGATCATATTGCT+AGG | + | chr6.1:73817874-73817893 | MS.gene98828:CDS | 40.0% | |
| GTTTGTAATCATCGCCATCT+GGG | - | chr6.1:73818581-73818600 | None:intergenic | 40.0% | |
| TAACCACGAAGGAAATGCAA+GGG | - | chr6.1:73815755-73815774 | None:intergenic | 40.0% | |
| TAATTTATGACTGCAGGTGG+TGG | + | chr6.1:73817837-73817856 | MS.gene98828:intron | 40.0% | |
| TCCTATGTCTGTAATCCTCA+TGG | - | chr6.1:73818701-73818720 | None:intergenic | 40.0% | |
| TGAAGGACAATAATGCCCAA+CGG | + | chr6.1:73817943-73817962 | MS.gene98828:CDS | 40.0% | |
| TGAGGATTACAGACATAGGA+GGG | + | chr6.1:73818701-73818720 | MS.gene98828:CDS | 40.0% | |
| TGATAGTCATAGAGGTCGTA+GGG | + | chr6.1:73818185-73818204 | MS.gene98828:CDS | 40.0% | |
| TGATGATCGAAGGATACATG+TGG | + | chr6.1:73817644-73817663 | MS.gene98828:CDS | 40.0% | |
| TGGTGTTTCGTTTCTCTCTT+TGG | - | chr6.1:73818108-73818127 | None:intergenic | 40.0% | |
| TTACCCCTTTCACAATTGCA+GGG | - | chr6.1:73817034-73817053 | None:intergenic | 40.0% | |
| TTACTGTATGCTTTCCGTCA+AGG | - | chr6.1:73814615-73814634 | None:intergenic | 40.0% | |
| TTCCTTCGTGGTTACTAAGA+GGG | + | chr6.1:73815761-73815780 | MS.gene98828:intron | 40.0% | |
| TTCTTGTCGGCATGAAAATC+CGG | - | chr6.1:73818318-73818337 | None:intergenic | 40.0% | |
| TTTCCTTCGTGGTTACTAAG+AGG | + | chr6.1:73815760-73815779 | MS.gene98828:intron | 40.0% | |
| ! | AAGTCCGACTTGAAGATGAT+TGG | + | chr6.1:73816162-73816181 | MS.gene98828:CDS | 40.0% |
| ! | AGTCCGACTTGAAGATGATT+GGG | + | chr6.1:73816163-73816182 | MS.gene98828:CDS | 40.0% |
| ! | CAAGATGTGAAGGTTGATTC+TGG | + | chr6.1:73818540-73818559 | MS.gene98828:CDS | 40.0% |
| ! | CTTTTCCTTACCTCGTCTTT+AGG | - | chr6.1:73815203-73815222 | None:intergenic | 40.0% |
| ! | GATCAAAGGAAGCACATTCT+AGG | + | chr6.1:73816234-73816253 | MS.gene98828:CDS | 40.0% |
| ! | TGTGGGAGCAATTCCTTTTA+TGG | + | chr6.1:73815474-73815493 | MS.gene98828:intron | 40.0% |
| !! | ACAGACTCTAAAGTAACAGG+TGG | - | chr6.1:73815521-73815540 | None:intergenic | 40.0% |
| !! | ACTTTAGAGTCTGTTTGGGA+GGG | + | chr6.1:73815527-73815546 | MS.gene98828:intron | 40.0% |
| !! | CGTCACTTTGAAGTTCAAAC+AGG | - | chr6.1:73816112-73816131 | None:intergenic | 40.0% |
| !! | TACTTTAGAGTCTGTTTGGG+AGG | + | chr6.1:73815526-73815545 | MS.gene98828:intron | 40.0% |
| !! | TCGTCTTTAGGTTTTCCTTC+TGG | - | chr6.1:73815191-73815210 | None:intergenic | 40.0% |
| AAAACGAAGCCTGGATGATG+GGG | + | chr6.1:73818656-73818675 | MS.gene98828:CDS | 45.0% | |
| AACCCTCTTAGTAACCACGA+AGG | - | chr6.1:73815766-73815785 | None:intergenic | 45.0% | |
| AAGGACAATAATGCCCAACG+GGG | + | chr6.1:73817945-73817964 | MS.gene98828:CDS | 45.0% | |
| AAGGATTTCACTGCTCAGAC+TGG | + | chr6.1:73813867-73813886 | MS.gene98828:intron | 45.0% | |
| AATACGCCAAACCCACTTAG+TGG | - | chr6.1:73817374-73817393 | None:intergenic | 45.0% | |
| ACCTACCCTGCAATTGTGAA+AGG | + | chr6.1:73817026-73817045 | MS.gene98828:intron | 45.0% | |
| AGAAAACGAAGCCTGGATGA+TGG | + | chr6.1:73818654-73818673 | MS.gene98828:CDS | 45.0% | |
| AGAAGAAAACGAAGCCCAGA+TGG | + | chr6.1:73818564-73818583 | MS.gene98828:CDS | 45.0% | |
| AGATGCTGAGGTTAAACCTC+CGG | + | chr6.1:73816379-73816398 | MS.gene98828:CDS | 45.0% | |
| AGATTACCCACCTCAGTAAC+CGG | - | chr6.1:73816434-73816453 | None:intergenic | 45.0% | |
| AGCGATATGAAAGGGATGAC+CGG | + | chr6.1:73818127-73818146 | MS.gene98828:CDS | 45.0% | |
| AGCTGAGGAGGATCATCAAA+AGG | - | chr6.1:73815143-73815162 | None:intergenic | 45.0% | |
| AGGAAATGCAAGGGTCTCTT+TGG | - | chr6.1:73815746-73815765 | None:intergenic | 45.0% | |
| ATACGCCAAACCCACTTAGT+GGG | - | chr6.1:73817373-73817392 | None:intergenic | 45.0% | |
| ATAGAGACGATGACTACCGA+CGG | + | chr6.1:73818367-73818386 | MS.gene98828:CDS | 45.0% | |
| ATGACAGCCATTTGGATAGG+AGG | + | chr6.1:73818475-73818494 | MS.gene98828:CDS | 45.0% | |
| ATGGGGATTACAAACGTGGA+AGG | + | chr6.1:73818673-73818692 | MS.gene98828:CDS | 45.0% | |
| ATTCCTGAAGCTTCACCAGA+AGG | + | chr6.1:73815173-73815192 | MS.gene98828:CDS | 45.0% | |
| ATTGAATCCGGTTACTGAGG+TGG | + | chr6.1:73816424-73816443 | MS.gene98828:intron | 45.0% | |
| CAGATGACAGCCATTTGGAT+AGG | + | chr6.1:73818472-73818491 | MS.gene98828:CDS | 45.0% | |
| CAGGCTCGAATAACAGAGAT+AGG | + | chr6.1:73818220-73818239 | MS.gene98828:CDS | 45.0% | |
| CAGTGTAAGGCAAGATGTGA+AGG | + | chr6.1:73818530-73818549 | MS.gene98828:CDS | 45.0% | |
| CATATTGCTAGGGATTGCAC+TGG | + | chr6.1:73817885-73817904 | MS.gene98828:CDS | 45.0% | |
| CCAAGACTTATCCCACTAAG+TGG | + | chr6.1:73817359-73817378 | MS.gene98828:intron | 45.0% | |
| CCACTTAGTGGGATAAGTCT+TGG | - | chr6.1:73817362-73817381 | None:intergenic | 45.0% | |
| CCGACAAGAAAGACAGAGAA+AGG | + | chr6.1:73818328-73818347 | MS.gene98828:CDS | 45.0% | |
| CCTACCCTGCAATTGTGAAA+GGG | + | chr6.1:73817027-73817046 | MS.gene98828:intron | 45.0% | |
| CCTGCGAAACAATCAAAGCA+AGG | - | chr6.1:73814656-73814675 | None:intergenic | 45.0% | |
| CCTTGCTTTGATTGTTTCGC+AGG | + | chr6.1:73814653-73814672 | MS.gene98828:intron | 45.0% | |
| CGAAACACCAGCGATATGAA+AGG | + | chr6.1:73818118-73818137 | MS.gene98828:CDS | 45.0% | |
| CGTTTGTAATCATCGCCATC+TGG | - | chr6.1:73818582-73818601 | None:intergenic | 45.0% | |
| CTACCCTGCAATTGTGAAAG+GGG | + | chr6.1:73817028-73817047 | MS.gene98828:intron | 45.0% | |
| GAAAACGAAGCCTGGATGAT+GGG | + | chr6.1:73818655-73818674 | MS.gene98828:CDS | 45.0% | |
| GAAGCTTCAGGAATGAACTC+AGG | - | chr6.1:73815167-73815186 | None:intergenic | 45.0% | |
| GAAGGACAATAATGCCCAAC+GGG | + | chr6.1:73817944-73817963 | MS.gene98828:CDS | 45.0% | |
| GACAGAGTTCGAAGACAAAC+TGG | + | chr6.1:73817103-73817122 | MS.gene98828:intron | 45.0% | |
| GATTACAGACATAGGAGGGA+AGG | + | chr6.1:73818705-73818724 | MS.gene98828:CDS | 45.0% | |
| GATTGTTTCGCAGGGTACAT+GGG | + | chr6.1:73814662-73814681 | MS.gene98828:intron | 45.0% | |
| GCACCCAATCATCTTCAAGT+CGG | - | chr6.1:73816169-73816188 | None:intergenic | 45.0% | |
| GCATTATCCATCTGCAGATC+AGG | - | chr6.1:73817618-73817637 | None:intergenic | 45.0% | |
| GCTTTCCGTCAAGGTAATCA+AGG | - | chr6.1:73814606-73814625 | None:intergenic | 45.0% | |
| GGAAACGGAGATGATAAAGC+GGG | + | chr6.1:73818270-73818289 | MS.gene98828:CDS | 45.0% | |
| GGAAATGCAAGGGTCTCTTT+GGG | - | chr6.1:73815745-73815764 | None:intergenic | 45.0% | |
| GTAACCACGAAGGAAATGCA+AGG | - | chr6.1:73815756-73815775 | None:intergenic | 45.0% | |
| GTTTGTAATCCCCATCATCC+AGG | - | chr6.1:73818668-73818687 | None:intergenic | 45.0% | |
| TAAGACTGGAACTGTTGCCA+TGG | + | chr6.1:73814365-73814384 | MS.gene98828:CDS | 45.0% | |
| TCACATCACATGTGCTGTGT+CGG | + | chr6.1:73814169-73814188 | MS.gene98828:intron | 45.0% | |
| TGACAGCCATTTGGATAGGA+GGG | + | chr6.1:73818476-73818495 | MS.gene98828:CDS | 45.0% | |
| TGATTGTTTCGCAGGGTACA+TGG | + | chr6.1:73814661-73814680 | MS.gene98828:intron | 45.0% | |
| TGGGGATTACAAACGTGGAA+GGG | + | chr6.1:73818674-73818693 | MS.gene98828:CDS | 45.0% | |
| TTATCCATCTGCAGATCAGG+AGG | - | chr6.1:73817615-73817634 | None:intergenic | 45.0% | |
| TTGAATCCGGTTACTGAGGT+GGG | + | chr6.1:73816425-73816444 | MS.gene98828:intron | 45.0% | |
| TTTCCTTCTGGTGAAGCTTC+AGG | - | chr6.1:73815179-73815198 | None:intergenic | 45.0% | |
| ! | AGTCTAGCTCATCTTTCCGT+CGG | - | chr6.1:73818386-73818405 | None:intergenic | 45.0% |
| ! | CAACGGCCTTCTGATTTTTC+AGG | + | chr6.1:73814280-73814299 | MS.gene98828:intron | 45.0% |
| ! | CTTATCCCACTAAGTGGGTT+TGG | + | chr6.1:73817365-73817384 | MS.gene98828:intron | 45.0% |
| ! | GGTAGGTTTGAGATACTCTC+AGG | - | chr6.1:73817013-73817032 | None:intergenic | 45.0% |
| ! | TATGCCATCCTGCAGGTTTT+TGG | + | chr6.1:73814899-73814918 | MS.gene98828:intron | 45.0% |
| ! | TTTAGAGTCTGTTTGGGAGG+GGG | + | chr6.1:73815529-73815548 | MS.gene98828:intron | 45.0% |
| ! | TTTGGGAGAGGGATTTTGGA+AGG | - | chr6.1:73815728-73815747 | None:intergenic | 45.0% |
| !! | CTTTAGAGTCTGTTTGGGAG+GGG | + | chr6.1:73815528-73815547 | MS.gene98828:intron | 45.0% |
| !! | GATGATGGGGATTACAAACG+TGG | + | chr6.1:73818669-73818688 | MS.gene98828:CDS | 45.0% |
| !! | GGTGGATTTTCTCCCTAGTT+TGG | - | chr6.1:73815503-73815522 | None:intergenic | 45.0% |
| !! | TCTCTTTGGGAGAGGGATTT+TGG | - | chr6.1:73815732-73815751 | None:intergenic | 45.0% |
| !! | TGCACACCAGACGTTTTAGT+AGG | + | chr6.1:73817234-73817253 | MS.gene98828:intron | 45.0% |
| !!! | GTTTTTGGTGAGGTAGCTGA+AGG | + | chr6.1:73814914-73814933 | MS.gene98828:CDS | 45.0% |
| AACGGGGTGGAGATAAAGCA+AGG | + | chr6.1:73817961-73817980 | MS.gene98828:CDS | 50.0% | |
| ACTGGTGATCCTACTGGAAC+TGG | + | chr6.1:73813885-73813904 | MS.gene98828:CDS | 50.0% | |
| AGACAAACTGGCATGTGAGC+AGG | + | chr6.1:73817115-73817134 | MS.gene98828:CDS | 50.0% | |
| AGACCCTTGCATTTCCTTCG+TGG | + | chr6.1:73815749-73815768 | MS.gene98828:intron | 50.0% | |
| AGCAGAGGGCTTGAAGGAAA+CGG | + | chr6.1:73818255-73818274 | MS.gene98828:CDS | 50.0% | |
| ATGAACTCAGGTAGCTGAGG+AGG | - | chr6.1:73815155-73815174 | None:intergenic | 50.0% | |
| ATTCTCTCCTGCACTAGCCA+TGG | - | chr6.1:73814385-73814404 | None:intergenic | 50.0% | |
| CCCTTTCACAATTGCAGGGT+AGG | - | chr6.1:73817030-73817049 | None:intergenic | 50.0% | |
| CTACCTCACCAAAAACCTGC+AGG | - | chr6.1:73814910-73814929 | None:intergenic | 50.0% | |
| CTCACCAAAAACCTGCAGGA+TGG | - | chr6.1:73814906-73814925 | None:intergenic | 50.0% | |
| GAGGCTTATGCCGATGGAAA+GGG | + | chr6.1:73814962-73814981 | MS.gene98828:CDS | 50.0% | |
| GATAAAGCGGGACTGGAAAG+AGG | + | chr6.1:73818282-73818301 | MS.gene98828:CDS | 50.0% | |
| GATAGAAGCAGAGGGCTTGA+AGG | + | chr6.1:73818249-73818268 | MS.gene98828:CDS | 50.0% | |
| GGAATGAACTCAGGTAGCTG+AGG | - | chr6.1:73815158-73815177 | None:intergenic | 50.0% | |
| GGAGGGATGACCGAGATTAT+AGG | + | chr6.1:73818493-73818512 | MS.gene98828:CDS | 50.0% | |
| GGAGGTTTAACCTCAGCATC+TGG | - | chr6.1:73816380-73816399 | None:intergenic | 50.0% | |
| GGGAAGGTCGTGAACATAGA+AGG | + | chr6.1:73818721-73818740 | MS.gene98828:CDS | 50.0% | |
| GGTACATGGGCATCATTGCA+TGG | + | chr6.1:73814675-73814694 | MS.gene98828:intron | 50.0% | |
| GGTATCGCGATAGAAGCAGA+GGG | + | chr6.1:73818241-73818260 | MS.gene98828:CDS | 50.0% | |
| GGTCATCCCTCCTATCCAAA+TGG | - | chr6.1:73818485-73818504 | None:intergenic | 50.0% | |
| GGTCATCCCTTTCATATCGC+TGG | - | chr6.1:73818128-73818147 | None:intergenic | 50.0% | |
| GTGTGTTACCCTCCTGAACT+AGG | - | chr6.1:73815885-73815904 | None:intergenic | 50.0% | |
| TCATAGAGGTCGTAGGGATC+AGG | + | chr6.1:73818191-73818210 | MS.gene98828:CDS | 50.0% | |
| TCTGTTTGGGAGGGGGATAT+TGG | + | chr6.1:73815536-73815555 | MS.gene98828:intron | 50.0% | |
| TGAAGATGATTGGGTGCCCA+TGG | + | chr6.1:73816172-73816191 | MS.gene98828:CDS | 50.0% | |
| TGAGGCTTATGCCGATGGAA+AGG | + | chr6.1:73814961-73814980 | MS.gene98828:CDS | 50.0% | |
| TGCTTTATCTCCACCCCGTT+GGG | - | chr6.1:73817961-73817980 | None:intergenic | 50.0% | |
| TGGGGATATTCCAGATGCTG+AGG | + | chr6.1:73816367-73816386 | MS.gene98828:CDS | 50.0% | |
| TTGCTTTATCTCCACCCCGT+TGG | - | chr6.1:73817962-73817981 | None:intergenic | 50.0% | |
| ! | AGGTATCGCGATAGAAGCAG+AGG | + | chr6.1:73818240-73818259 | MS.gene98828:CDS | 50.0% |
| ! | CAGGCTTCGTTTTCTTCGTC+CGG | - | chr6.1:73818649-73818668 | None:intergenic | 50.0% |
| ! | GGAAAGAGGTGCAAGAGATC+CGG | + | chr6.1:73818296-73818315 | MS.gene98828:CDS | 50.0% |
| ! | GGTGGTGGTTGCTTCAAATG+TGG | + | chr6.1:73817852-73817871 | MS.gene98828:intron | 50.0% |
| ! | TCTAAGGTATGCCATCCTGC+AGG | + | chr6.1:73814892-73814911 | MS.gene98828:intron | 50.0% |
| !! | GAGAGGGATTTTGGAAGGCA+AGG | - | chr6.1:73815723-73815742 | None:intergenic | 50.0% |
| !!! | CATCCTGCAGGTTTTTGGTG+AGG | + | chr6.1:73814904-73814923 | MS.gene98828:intron | 50.0% |
| ACTGTTGCCATGGCTAGTGC+AGG | + | chr6.1:73814375-73814394 | MS.gene98828:CDS | 55.0% | |
| AGGGGGATATTGGAGGAGAG+GGG | + | chr6.1:73815546-73815565 | MS.gene98828:intron | 55.0% | |
| AGGTCGTAGGGATCAGGAGA+TGG | + | chr6.1:73818197-73818216 | MS.gene98828:CDS | 55.0% | |
| ATGGCCTCCTGATCTGCAGA+TGG | + | chr6.1:73817608-73817627 | MS.gene98828:intron | 55.0% | |
| CAAACGTGGAAGGGACCATG+AGG | + | chr6.1:73818683-73818702 | MS.gene98828:CDS | 55.0% | |
| CGGACGAAGAAAACGAAGCC+TGG | + | chr6.1:73818647-73818666 | MS.gene98828:CDS | 55.0% | |
| CGGAGATGATAAAGCGGGAC+TGG | + | chr6.1:73818275-73818294 | MS.gene98828:CDS | 55.0% | |
| GACAATAATGCCCAACGGGG+TGG | + | chr6.1:73817948-73817967 | MS.gene98828:CDS | 55.0% | |
| GAGGGGGATATTGGAGGAGA+GGG | + | chr6.1:73815545-73815564 | MS.gene98828:intron | 55.0% | |
| GCTCAGACTGGTGATCCTAC+TGG | + | chr6.1:73813879-73813898 | MS.gene98828:CDS | 55.0% | |
| GTTTGGGAGGGGGATATTGG+AGG | + | chr6.1:73815539-73815558 | MS.gene98828:intron | 55.0% | |
| TGCAGATCAGGAGGCCATGA+AGG | - | chr6.1:73817606-73817625 | None:intergenic | 55.0% | |
| TTGGAGGAGAGGGGAGGTAA+AGG | + | chr6.1:73815555-73815574 | MS.gene98828:intron | 55.0% | |
| ! | GCAAGGGTCTCTTTGGGAGA+GGG | - | chr6.1:73815739-73815758 | None:intergenic | 55.0% |
| ! | TGCAAGGGTCTCTTTGGGAG+AGG | - | chr6.1:73815740-73815759 | None:intergenic | 55.0% |
| !! | GACGGGCTAGTCGAGATGAT+AGG | + | chr6.1:73818442-73818461 | MS.gene98828:CDS | 55.0% |
| CCAGCAGTGCCAGTTCCAGT+AGG | - | chr6.1:73813897-73813916 | None:intergenic | 60.0% | |
| CCTACTGGAACTGGCACTGC+TGG | + | chr6.1:73813894-73813913 | MS.gene98828:CDS | 60.0% | |
| CGTAGGGATCAGGAGATGGC+AGG | + | chr6.1:73818201-73818220 | MS.gene98828:CDS | 60.0% | |
| GGAGGGGGATATTGGAGGAG+AGG | + | chr6.1:73815544-73815563 | MS.gene98828:intron | 60.0% | |
| GGGATATTGGAGGAGAGGGG+AGG | + | chr6.1:73815549-73815568 | MS.gene98828:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.1 | gene | 73813696 | 73818749 | 73813696 | ID=MS.gene98828 |
| chr6.1 | mRNA | 73813696 | 73818749 | 73813696 | ID=MS.gene98828.t1;Parent=MS.gene98828 |
| chr6.1 | exon | 73813696 | 73813734 | 73813696 | ID=MS.gene98828.t1.exon1;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73813696 | 73813734 | 73813696 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73813870 | 73813931 | 73813870 | ID=MS.gene98828.t1.exon2;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73813870 | 73813931 | 73813870 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73814302 | 73814419 | 73814302 | ID=MS.gene98828.t1.exon3;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73814302 | 73814419 | 73814302 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73814580 | 73814630 | 73814580 | ID=MS.gene98828.t1.exon4;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73814580 | 73814630 | 73814580 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73814914 | 73815005 | 73814914 | ID=MS.gene98828.t1.exon5;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73814914 | 73815005 | 73814914 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73815112 | 73815211 | 73815112 | ID=MS.gene98828.t1.exon6;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73815112 | 73815211 | 73815112 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73816152 | 73816274 | 73816152 | ID=MS.gene98828.t1.exon7;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73816152 | 73816274 | 73816152 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73816365 | 73816442 | 73816365 | ID=MS.gene98828.t1.exon8;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73816365 | 73816442 | 73816365 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73816563 | 73816609 | 73816563 | ID=MS.gene98828.t1.exon9;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73816563 | 73816609 | 73816563 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73816704 | 73816759 | 73816704 | ID=MS.gene98828.t1.exon10;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73816704 | 73816759 | 73816704 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73817108 | 73817148 | 73817108 | ID=MS.gene98828.t1.exon11;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73817108 | 73817148 | 73817108 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73817627 | 73817723 | 73817627 | ID=MS.gene98828.t1.exon12;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73817627 | 73817723 | 73817627 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73817853 | 73817982 | 73817853 | ID=MS.gene98828.t1.exon13;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73817853 | 73817982 | 73817853 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| chr6.1 | exon | 73818068 | 73818749 | 73818068 | ID=MS.gene98828.t1.exon14;Parent=MS.gene98828.t1 |
| chr6.1 | CDS | 73818068 | 73818749 | 73818068 | ID=cds.MS.gene98828.t1;Parent=MS.gene98828.t1 |
| Gene Sequence |
| Protein sequence |
