Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47989.t1 | XP_013446743.1 | 96 | 594 | 24 | 0 | 1 | 594 | 8 | 601 | 1.9e-308 | 1067.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47989.t1 | F4HVG8 | 60.2 | 538 | 188 | 8 | 55 | 586 | 82 | 599 | 3.3e-173 | 609.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47989.t1 | A0A072U4L7 | 96.0 | 594 | 24 | 0 | 1 | 594 | 8 | 601 | 1.3e-308 | 1067.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049171 | MS.gene47989 | 0.870834 | 1.08E-66 | -1.69E-46 |
MS.gene04921 | MS.gene47989 | -0.801828 | 7.49E-49 | -1.69E-46 |
MS.gene049222 | MS.gene47989 | 0.894549 | 2.22E-75 | -1.69E-46 |
MS.gene049232 | MS.gene47989 | 0.877164 | 7.83E-69 | -1.69E-46 |
MS.gene049285 | MS.gene47989 | 0.861979 | 7.01E-64 | -1.69E-46 |
MS.gene049320 | MS.gene47989 | 0.854235 | 1.41E-61 | -1.69E-46 |
MS.gene049609 | MS.gene47989 | 0.825874 | 3.69E-54 | -1.69E-46 |
MS.gene049627 | MS.gene47989 | 0.83875 | 2.39E-57 | -1.69E-46 |
MS.gene049633 | MS.gene47989 | 0.859882 | 3.04E-63 | -1.69E-46 |
MS.gene049657 | MS.gene47989 | 0.826779 | 2.25E-54 | -1.69E-46 |
MS.gene049865 | MS.gene47989 | 0.831429 | 1.68E-55 | -1.69E-46 |
MS.gene05010 | MS.gene47989 | 0.864046 | 1.61E-64 | -1.69E-46 |
MS.gene050163 | MS.gene47989 | 0.842666 | 2.25E-58 | -1.69E-46 |
MS.gene050165 | MS.gene47989 | 0.846452 | 2.15E-59 | -1.69E-46 |
MS.gene050170 | MS.gene47989 | 0.915707 | 4.27E-85 | -1.69E-46 |
MS.gene050216 | MS.gene47989 | 0.802764 | 4.81E-49 | -1.69E-46 |
MS.gene050323 | MS.gene47989 | 0.879755 | 9.62E-70 | -1.69E-46 |
MS.gene050333 | MS.gene47989 | 0.813176 | 2.92E-51 | -1.69E-46 |
MS.gene050403 | MS.gene47989 | 0.801895 | 7.26E-49 | -1.69E-46 |
MS.gene050496 | MS.gene47989 | 0.86509 | 7.60E-65 | -1.69E-46 |
MS.gene050504 | MS.gene47989 | 0.895544 | 8.66E-76 | -1.69E-46 |
MS.gene050518 | MS.gene47989 | 0.8665 | 2.72E-65 | -1.69E-46 |
MS.gene050577 | MS.gene47989 | 0.908935 | 9.92E-82 | -1.69E-46 |
MS.gene050612 | MS.gene47989 | 0.861322 | 1.11E-63 | -1.69E-46 |
MS.gene050647 | MS.gene47989 | -0.804083 | 2.56E-49 | -1.69E-46 |
MS.gene050675 | MS.gene47989 | 0.837272 | 5.73E-57 | -1.69E-46 |
MS.gene050699 | MS.gene47989 | 0.844548 | 7.06E-59 | -1.69E-46 |
MS.gene050747 | MS.gene47989 | 0.869221 | 3.64E-66 | -1.69E-46 |
MS.gene050772 | MS.gene47989 | 0.830603 | 2.68E-55 | -1.69E-46 |
MS.gene05080 | MS.gene47989 | 0.851282 | 9.82E-61 | -1.69E-46 |
MS.gene050868 | MS.gene47989 | 0.906067 | 2.20E-80 | -1.69E-46 |
MS.gene050871 | MS.gene47989 | 0.904917 | 7.43E-80 | -1.69E-46 |
MS.gene050876 | MS.gene47989 | 0.85317 | 2.85E-61 | -1.69E-46 |
MS.gene050904 | MS.gene47989 | 0.930813 | 9.47E-94 | -1.69E-46 |
MS.gene050950 | MS.gene47989 | 0.866705 | 2.34E-65 | -1.69E-46 |
MS.gene050986 | MS.gene47989 | 0.871426 | 6.90E-67 | -1.69E-46 |
MS.gene051268 | MS.gene47989 | 0.842288 | 2.83E-58 | -1.69E-46 |
MS.gene051317 | MS.gene47989 | 0.864532 | 1.14E-64 | -1.69E-46 |
MS.gene051509 | MS.gene47989 | 0.814298 | 1.65E-51 | -1.69E-46 |
MS.gene051551 | MS.gene47989 | 0.83416 | 3.52E-56 | -1.69E-46 |
MS.gene051560 | MS.gene47989 | 0.807788 | 4.26E-50 | -1.69E-46 |
MS.gene051694 | MS.gene47989 | 0.802352 | 5.84E-49 | -1.69E-46 |
MS.gene051838 | MS.gene47989 | 0.830753 | 2.46E-55 | -1.69E-46 |
MS.gene051941 | MS.gene47989 | 0.80968 | 1.68E-50 | -1.69E-46 |
MS.gene052066 | MS.gene47989 | 0.833874 | 4.15E-56 | -1.69E-46 |
MS.gene052164 | MS.gene47989 | 0.890692 | 7.83E-74 | -1.69E-46 |
MS.gene052482 | MS.gene47989 | 0.909518 | 5.22E-82 | -1.69E-46 |
MS.gene052486 | MS.gene47989 | 0.909824 | 3.71E-82 | -1.69E-46 |
MS.gene052494 | MS.gene47989 | -0.833739 | 4.48E-56 | -1.69E-46 |
MS.gene052503 | MS.gene47989 | 0.85575 | 5.12E-62 | -1.69E-46 |
MS.gene052506 | MS.gene47989 | 0.804865 | 1.76E-49 | -1.69E-46 |
MS.gene052606 | MS.gene47989 | -0.808853 | 2.53E-50 | -1.69E-46 |
MS.gene052615 | MS.gene47989 | 0.804885 | 1.74E-49 | -1.69E-46 |
MS.gene052822 | MS.gene47989 | 0.808237 | 3.42E-50 | -1.69E-46 |
MS.gene052823 | MS.gene47989 | 0.861864 | 7.60E-64 | -1.69E-46 |
MS.gene052825 | MS.gene47989 | 0.858709 | 6.84E-63 | -1.69E-46 |
MS.gene052966 | MS.gene47989 | 0.86744 | 1.37E-65 | -1.69E-46 |
MS.gene053083 | MS.gene47989 | -0.801536 | 8.60E-49 | -1.69E-46 |
MS.gene053097 | MS.gene47989 | -0.817846 | 2.67E-52 | -1.69E-46 |
MS.gene053203 | MS.gene47989 | 0.886648 | 2.85E-72 | -1.69E-46 |
MS.gene053213 | MS.gene47989 | 0.838998 | 2.06E-57 | -1.69E-46 |
MS.gene053286 | MS.gene47989 | 0.845642 | 3.58E-59 | -1.69E-46 |
MS.gene053420 | MS.gene47989 | -0.817464 | 3.25E-52 | -1.69E-46 |
MS.gene053421 | MS.gene47989 | -0.817835 | 2.68E-52 | -1.69E-46 |
MS.gene053436 | MS.gene47989 | 0.835606 | 1.52E-56 | -1.69E-46 |
MS.gene053479 | MS.gene47989 | 0.847608 | 1.04E-59 | -1.69E-46 |
MS.gene053480 | MS.gene47989 | 0.857424 | 1.65E-62 | -1.69E-46 |
MS.gene053574 | MS.gene47989 | 0.867904 | 9.70E-66 | -1.69E-46 |
MS.gene053626 | MS.gene47989 | 0.860694 | 1.73E-63 | -1.69E-46 |
MS.gene053633 | MS.gene47989 | 0.817817 | 2.71E-52 | -1.69E-46 |
MS.gene053824 | MS.gene47989 | 0.8711 | 8.84E-67 | -1.69E-46 |
MS.gene054003 | MS.gene47989 | 0.80146 | 8.91E-49 | -1.69E-46 |
MS.gene054408 | MS.gene47989 | 0.865023 | 7.98E-65 | -1.69E-46 |
MS.gene054595 | MS.gene47989 | 0.865553 | 5.43E-65 | -1.69E-46 |
MS.gene054600 | MS.gene47989 | 0.835798 | 1.36E-56 | -1.69E-46 |
MS.gene054642 | MS.gene47989 | 0.81855 | 1.85E-52 | -1.69E-46 |
MS.gene054706 | MS.gene47989 | -0.819749 | 9.86E-53 | -1.69E-46 |
MS.gene05470 | MS.gene47989 | 0.920053 | 2.08E-87 | -1.69E-46 |
MS.gene054851 | MS.gene47989 | -0.806735 | 7.12E-50 | -1.69E-46 |
MS.gene054927 | MS.gene47989 | 0.825572 | 4.36E-54 | -1.69E-46 |
MS.gene054954 | MS.gene47989 | 0.873493 | 1.41E-67 | -1.69E-46 |
MS.gene055224 | MS.gene47989 | 0.826595 | 2.49E-54 | -1.69E-46 |
MS.gene055362 | MS.gene47989 | 0.861582 | 9.27E-64 | -1.69E-46 |
MS.gene055502 | MS.gene47989 | 0.870458 | 1.44E-66 | -1.69E-46 |
MS.gene055577 | MS.gene47989 | 0.88015 | 6.95E-70 | -1.69E-46 |
MS.gene055629 | MS.gene47989 | 0.801943 | 7.09E-49 | -1.69E-46 |
MS.gene055748 | MS.gene47989 | 0.891347 | 4.32E-74 | -1.69E-46 |
MS.gene055750 | MS.gene47989 | 0.902261 | 1.16E-78 | -1.69E-46 |
MS.gene055751 | MS.gene47989 | 0.897973 | 8.36E-77 | -1.69E-46 |
MS.gene055776 | MS.gene47989 | 0.820526 | 6.55E-53 | -1.69E-46 |
MS.gene05589 | MS.gene47989 | 0.917663 | 4.04E-86 | -1.69E-46 |
MS.gene055941 | MS.gene47989 | 0.832191 | 1.09E-55 | -1.69E-46 |
MS.gene056040 | MS.gene47989 | 0.859796 | 3.23E-63 | -1.69E-46 |
MS.gene056046 | MS.gene47989 | 0.802341 | 5.87E-49 | -1.69E-46 |
MS.gene056166 | MS.gene47989 | 0.845418 | 4.11E-59 | -1.69E-46 |
MS.gene056218 | MS.gene47989 | -0.800802 | 1.21E-48 | -1.69E-46 |
MS.gene056266 | MS.gene47989 | 0.816194 | 6.27E-52 | -1.69E-46 |
MS.gene056283 | MS.gene47989 | 0.810435 | 1.15E-50 | -1.69E-46 |
MS.gene056387 | MS.gene47989 | 0.848555 | 5.69E-60 | -1.69E-46 |
MS.gene056409 | MS.gene47989 | 0.817899 | 2.60E-52 | -1.69E-46 |
MS.gene056446 | MS.gene47989 | 0.818863 | 1.57E-52 | -1.69E-46 |
MS.gene056449 | MS.gene47989 | 0.803215 | 3.88E-49 | -1.69E-46 |
MS.gene056450 | MS.gene47989 | 0.867827 | 1.03E-65 | -1.69E-46 |
MS.gene056504 | MS.gene47989 | 0.91344 | 6.14E-84 | -1.69E-46 |
MS.gene056510 | MS.gene47989 | 0.884833 | 1.37E-71 | -1.69E-46 |
MS.gene056549 | MS.gene47989 | 0.805613 | 1.23E-49 | -1.69E-46 |
MS.gene056583 | MS.gene47989 | -0.803855 | 2.86E-49 | -1.69E-46 |
MS.gene056610 | MS.gene47989 | 0.824126 | 9.56E-54 | -1.69E-46 |
MS.gene056618 | MS.gene47989 | -0.806181 | 9.32E-50 | -1.69E-46 |
MS.gene056657 | MS.gene47989 | 0.845879 | 3.08E-59 | -1.69E-46 |
MS.gene056692 | MS.gene47989 | 0.868124 | 8.25E-66 | -1.69E-46 |
MS.gene056694 | MS.gene47989 | -0.817892 | 2.60E-52 | -1.69E-46 |
MS.gene056878 | MS.gene47989 | 0.824926 | 6.19E-54 | -1.69E-46 |
MS.gene057086 | MS.gene47989 | 0.814731 | 1.33E-51 | -1.69E-46 |
MS.gene057416 | MS.gene47989 | 0.80294 | 4.42E-49 | -1.69E-46 |
MS.gene057658 | MS.gene47989 | 0.838945 | 2.13E-57 | -1.69E-46 |
MS.gene057687 | MS.gene47989 | 0.805447 | 1.33E-49 | -1.69E-46 |
MS.gene057768 | MS.gene47989 | -0.804761 | 1.85E-49 | -1.69E-46 |
MS.gene057831 | MS.gene47989 | 0.857358 | 1.72E-62 | -1.69E-46 |
MS.gene057857 | MS.gene47989 | 0.801304 | 9.59E-49 | -1.69E-46 |
MS.gene057872 | MS.gene47989 | 0.838759 | 2.38E-57 | -1.69E-46 |
MS.gene05787 | MS.gene47989 | 0.881713 | 1.91E-70 | -1.69E-46 |
MS.gene058130 | MS.gene47989 | 0.802969 | 4.36E-49 | -1.69E-46 |
MS.gene058157 | MS.gene47989 | 0.850516 | 1.61E-60 | -1.69E-46 |
MS.gene058171 | MS.gene47989 | -0.829257 | 5.69E-55 | -1.69E-46 |
MS.gene058173 | MS.gene47989 | -0.824048 | 9.97E-54 | -1.69E-46 |
MS.gene058175 | MS.gene47989 | -0.83096 | 2.19E-55 | -1.69E-46 |
MS.gene058334 | MS.gene47989 | -0.843963 | 1.01E-58 | -1.69E-46 |
MS.gene058338 | MS.gene47989 | 0.81856 | 1.84E-52 | -1.69E-46 |
MS.gene05837 | MS.gene47989 | 0.889394 | 2.52E-73 | -1.69E-46 |
MS.gene058419 | MS.gene47989 | 0.854965 | 8.66E-62 | -1.69E-46 |
MS.gene058544 | MS.gene47989 | 0.85642 | 3.26E-62 | -1.69E-46 |
MS.gene058719 | MS.gene47989 | 0.82092 | 5.31E-53 | -1.69E-46 |
MS.gene058773 | MS.gene47989 | 0.855369 | 6.61E-62 | -1.69E-46 |
MS.gene058838 | MS.gene47989 | 0.847642 | 1.02E-59 | -1.69E-46 |
MS.gene059022 | MS.gene47989 | 0.867246 | 1.58E-65 | -1.69E-46 |
MS.gene059023 | MS.gene47989 | 0.889953 | 1.53E-73 | -1.69E-46 |
MS.gene05912 | MS.gene47989 | 0.837104 | 6.33E-57 | -1.69E-46 |
MS.gene05914 | MS.gene47989 | 0.814326 | 1.63E-51 | -1.69E-46 |
MS.gene059367 | MS.gene47989 | 0.818495 | 1.90E-52 | -1.69E-46 |
MS.gene059526 | MS.gene47989 | -0.820942 | 5.25E-53 | -1.69E-46 |
MS.gene059667 | MS.gene47989 | 0.869165 | 3.80E-66 | -1.69E-46 |
MS.gene059677 | MS.gene47989 | 0.859202 | 4.87E-63 | -1.69E-46 |
MS.gene059718 | MS.gene47989 | 0.853714 | 1.99E-61 | -1.69E-46 |
MS.gene059756 | MS.gene47989 | 0.851378 | 9.23E-61 | -1.69E-46 |
MS.gene059801 | MS.gene47989 | 0.851984 | 6.22E-61 | -1.69E-46 |
MS.gene059837 | MS.gene47989 | 0.87687 | 9.89E-69 | -1.69E-46 |
MS.gene059865 | MS.gene47989 | 0.895 | 1.45E-75 | -1.69E-46 |
MS.gene05995 | MS.gene47989 | 0.800678 | 1.29E-48 | -1.69E-46 |
MS.gene05996 | MS.gene47989 | 0.831294 | 1.81E-55 | -1.69E-46 |
MS.gene06000 | MS.gene47989 | 0.901119 | 3.70E-78 | -1.69E-46 |
MS.gene060187 | MS.gene47989 | -0.826868 | 2.14E-54 | -1.69E-46 |
MS.gene06027 | MS.gene47989 | 0.806741 | 7.10E-50 | -1.69E-46 |
MS.gene060295 | MS.gene47989 | 0.800224 | 1.59E-48 | -1.69E-46 |
MS.gene06042 | MS.gene47989 | -0.803194 | 3.92E-49 | -1.69E-46 |
MS.gene060593 | MS.gene47989 | -0.81587 | 7.41E-52 | -1.69E-46 |
MS.gene060595 | MS.gene47989 | -0.866384 | 2.97E-65 | -1.69E-46 |
MS.gene060703 | MS.gene47989 | 0.836965 | 6.87E-57 | -1.69E-46 |
MS.gene060762 | MS.gene47989 | 0.900311 | 8.31E-78 | -1.69E-46 |
MS.gene060778 | MS.gene47989 | 0.894093 | 3.41E-75 | -1.69E-46 |
MS.gene06077 | MS.gene47989 | 0.926284 | 5.79E-91 | -1.69E-46 |
MS.gene06092 | MS.gene47989 | 0.831462 | 1.65E-55 | -1.69E-46 |
MS.gene06097 | MS.gene47989 | 0.839848 | 1.24E-57 | -1.69E-46 |
MS.gene060982 | MS.gene47989 | 0.904733 | 9.01E-80 | -1.69E-46 |
MS.gene061044 | MS.gene47989 | -0.831451 | 1.66E-55 | -1.69E-46 |
MS.gene061150 | MS.gene47989 | 0.840965 | 6.33E-58 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47989.t1 | MTR_8g089810 | 95.960 | 594 | 24 | 0 | 1 | 594 | 8 | 601 | 0.0 | 1155 |
MS.gene47989.t1 | MTR_8g089810 | 96.009 | 426 | 17 | 0 | 1 | 426 | 8 | 433 | 0.0 | 820 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47989.t1 | AT1G67840 | 60.150 | 532 | 186 | 8 | 61 | 586 | 88 | 599 | 0.0 | 636 |
MS.gene47989.t1 | AT1G67840 | 54.032 | 372 | 145 | 9 | 61 | 426 | 88 | 439 | 1.03e-122 | 370 |
Find 168 sgRNAs with CRISPR-Local
Find 384 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCCTTTGTTGTTGGCTTCT+TGG | 0.133045 | 4.1:-10777793 | MS.gene47989:CDS |
AGCTCCAAGTGGAGCATCTT+TGG | 0.305623 | 4.1:+10774467 | None:intergenic |
GACTATTGCCCGGGAGATAC+TGG | 0.314615 | 4.1:-10774529 | MS.gene47989:CDS |
GGAGGAGAGGGTGAGGGTGG+TGG | 0.328913 | 4.1:+10779193 | None:intergenic |
TCGTCATCGGAATCGGAGTT+AGG | 0.331639 | 4.1:+10779230 | None:intergenic |
GGGTTGAATAATCATGTATC+TGG | 0.332304 | 4.1:-10777717 | MS.gene47989:CDS |
GGAGTTAGGGTTAGCGTTGA+TGG | 0.333860 | 4.1:+10779244 | None:intergenic |
GTTACCATATAGTGCATATC+AGG | 0.354489 | 4.1:+10775231 | None:intergenic |
CGTTCCCGAATCGTTCTTAT+CGG | 0.360871 | 4.1:-10779018 | MS.gene47989:intron |
GTTAATAAAATGCATAAATC+TGG | 0.375057 | 4.1:-10775867 | MS.gene47989:CDS |
GTTAAACATCCCTTTGTTGT+TGG | 0.376078 | 4.1:-10777801 | MS.gene47989:CDS |
GACCGCACTTTCCGAATTGC+AGG | 0.381154 | 4.1:-10778763 | MS.gene47989:intron |
TCTGGCTATGGCATATGTTA+TGG | 0.382761 | 4.1:-10777550 | MS.gene47989:CDS |
CTTGGTTGCTGAGCTTCCAT+TGG | 0.384197 | 4.1:-10777775 | MS.gene47989:CDS |
CATGGGAAATTCAGACTATT+CGG | 0.388155 | 4.1:-10777647 | MS.gene47989:CDS |
AGAACTACAGCTTTACATTC+AGG | 0.395217 | 4.1:+10777831 | None:intergenic |
TTCTCTTAGTGCTGCTGCCC+AGG | 0.398572 | 4.1:-10775835 | MS.gene47989:CDS |
CGCGGGTGGAGGAGAGGGTG+AGG | 0.401310 | 4.1:+10779186 | None:intergenic |
CTGAAAGCCTGGCGCAGAGC+AGG | 0.408438 | 4.1:+10775363 | None:intergenic |
GAGGCAGAGTCGATGGAAAT+CGG | 0.411945 | 4.1:+10779067 | None:intergenic |
ATGACGTGGAACTTTGTTGC+TGG | 0.415315 | 4.1:-10774555 | MS.gene47989:CDS |
AGAACTCTTGGCTGAAGATA+TGG | 0.415896 | 4.1:-10774589 | MS.gene47989:CDS |
TTCGAAAGAGATGAAGTTGT+TGG | 0.418103 | 4.1:+10779045 | None:intergenic |
CAAGTGGAGCATCTTTGGTC+CGG | 0.421288 | 4.1:+10774472 | None:intergenic |
TAATGTCAGGATGAATAATC+TGG | 0.421755 | 4.1:-10776913 | MS.gene47989:CDS |
CTCCACTACGACATGGAATC+AGG | 0.422052 | 4.1:-10775779 | MS.gene47989:intron |
TAGTTATGTGATGGATCAAC+TGG | 0.423265 | 4.1:-10778895 | MS.gene47989:CDS |
GGAGGCGAGTGCGCGGGTGG+AGG | 0.425603 | 4.1:+10779175 | None:intergenic |
GAAGGGGCATCTCTATATCC+TGG | 0.426176 | 4.1:+10775817 | None:intergenic |
TATGGCATATGTTATGGATC+AGG | 0.432013 | 4.1:-10777544 | MS.gene47989:intron |
GGTTGCTGAGCTTCCATTGG+TGG | 0.432492 | 4.1:-10777772 | MS.gene47989:CDS |
ATGCAATGTTTCTGAAGTAT+TGG | 0.436879 | 4.1:-10775484 | MS.gene47989:CDS |
ACCAAGAAGCCAACAACAAA+GGG | 0.436980 | 4.1:+10777792 | None:intergenic |
AAAGATGCTCCACTTGGAGC+TGG | 0.439507 | 4.1:-10774465 | MS.gene47989:CDS |
AAGTGGAGCATCTTTGGTCC+GGG | 0.440131 | 4.1:+10774473 | None:intergenic |
TGTTGACATTTCACAGTCTC+TGG | 0.441936 | 4.1:-10777568 | MS.gene47989:CDS |
TGGACCTGATATGCACTATA+TGG | 0.442505 | 4.1:-10775235 | MS.gene47989:intron |
CAATTCGGAAAGTGCGGTCT+CGG | 0.443021 | 4.1:+10778767 | None:intergenic |
CGTTGAGATTTGAAGGTAAG+TGG | 0.443076 | 4.1:+10779296 | None:intergenic |
ATACAGCATCCTGGAGTTGT+TGG | 0.443402 | 4.1:+10776456 | None:intergenic |
GGTGGAGGAGAGGGTGAGGG+TGG | 0.448628 | 4.1:+10779190 | None:intergenic |
GGTTAGCGTTGATGGTTTGA+AGG | 0.451992 | 4.1:+10779252 | None:intergenic |
GCTTTCAGCAACCTTATTGA+AGG | 0.452369 | 4.1:-10775348 | MS.gene47989:CDS |
GGAGTAAAGCACCTTCAATA+AGG | 0.452645 | 4.1:+10775337 | None:intergenic |
CCGGTGATCGTCATCGGAAT+CGG | 0.453030 | 4.1:+10779223 | None:intergenic |
CAATAAGGTTGCTGAAAGCC+TGG | 0.458375 | 4.1:+10775352 | None:intergenic |
TGAGGGTGGTGGAATTGTTC+CGG | 0.459416 | 4.1:+10779204 | None:intergenic |
CTTTCAAGCATTCAAACCTT+GGG | 0.461316 | 4.1:-10776789 | MS.gene47989:CDS |
CCTTTCCTCCAACATGTGTT+CGG | 0.472155 | 4.1:+10775316 | None:intergenic |
GAGTGCGCGGGTGGAGGAGA+GGG | 0.475562 | 4.1:+10779181 | None:intergenic |
TCTGACTCAGCATCTCCTCC+AGG | 0.476951 | 4.1:+10778849 | None:intergenic |
CTCGTACTTATTGATGATGA+TGG | 0.476992 | 4.1:-10775255 | MS.gene47989:CDS |
GGCGGAGGCGAGTGCGCGGG+TGG | 0.478007 | 4.1:+10779172 | None:intergenic |
ACTTTCAAGCATTCAAACCT+TGG | 0.479091 | 4.1:-10776790 | MS.gene47989:CDS |
GCGGCATCGTTGAGATTTGA+AGG | 0.481008 | 4.1:+10779289 | None:intergenic |
GGGGAACTCGTGTAGAACTT+TGG | 0.482111 | 4.1:-10774443 | MS.gene47989:CDS |
AAGATGCTCCACTTGGAGCT+GGG | 0.482234 | 4.1:-10774464 | MS.gene47989:CDS |
TGAGCAACACACCTGCAATT+CGG | 0.483746 | 4.1:+10778752 | None:intergenic |
TGCTGGGCTGACTATTGCCC+GGG | 0.486262 | 4.1:-10774538 | MS.gene47989:CDS |
CGAACCGATAAGAACGATTC+GGG | 0.486961 | 4.1:+10779014 | None:intergenic |
TTCTGAAGTATTGGCAGACT+TGG | 0.488198 | 4.1:-10775475 | MS.gene47989:CDS |
CGGGAGATACTGGAGAGTTA+TGG | 0.488539 | 4.1:-10774519 | MS.gene47989:CDS |
CGTCATCGGAATCGGAGTTA+GGG | 0.488788 | 4.1:+10779231 | None:intergenic |
TTGCTGGGCTGACTATTGCC+CGG | 0.489104 | 4.1:-10774539 | MS.gene47989:CDS |
ACGAACCGATAAGAACGATT+CGG | 0.493218 | 4.1:+10779013 | None:intergenic |
GTGAAGTTGCACATATCAAC+CGG | 0.495437 | 4.1:+10777612 | None:intergenic |
AGTCGCTGAGTGAACTCGAC+GGG | 0.498448 | 4.1:+10779128 | None:intergenic |
AAATCAATCAAGAAAATGAA+TGG | 0.502569 | 4.1:-10775957 | MS.gene47989:CDS |
CATTTCACAGTCTCTGGCTA+TGG | 0.502587 | 4.1:-10777562 | MS.gene47989:CDS |
CGTAGTGGAGCGAGAGCTAA+AGG | 0.502814 | 4.1:+10775792 | None:intergenic |
AGGCAGAGTCGATGGAAATC+GGG | 0.503639 | 4.1:+10779068 | None:intergenic |
CAACATGGCAAAATAATGTC+AGG | 0.505416 | 4.1:-10776926 | MS.gene47989:CDS |
AGTCGATGGAAATCGGGACT+AGG | 0.507935 | 4.1:+10779074 | None:intergenic |
CGGAGGGTTGCAGTGTACCC+TGG | 0.509145 | 4.1:-10778867 | MS.gene47989:CDS |
TCAGATTTAACAACTGCCAT+TGG | 0.509352 | 4.1:+10774417 | None:intergenic |
CGAGTGCGCGGGTGGAGGAG+AGG | 0.509761 | 4.1:+10779180 | None:intergenic |
TGATGTTCTCCAACAACTCC+AGG | 0.510841 | 4.1:-10776465 | MS.gene47989:CDS |
ACCATACGGACAAGAACTCT+TGG | 0.514444 | 4.1:-10774601 | MS.gene47989:CDS |
ATTGTTCCGGTGATCGTCAT+CGG | 0.516068 | 4.1:+10779217 | None:intergenic |
AATTCAGACTATTCGGATCA+AGG | 0.516885 | 4.1:-10777640 | MS.gene47989:CDS |
GCCAAGAGTTCTTGTCCGTA+TGG | 0.518420 | 4.1:+10774600 | None:intergenic |
AGAAGAACCTGCTCTGCGCC+AGG | 0.520287 | 4.1:-10775370 | MS.gene47989:CDS |
CGGACCAAAGATGCTCCACT+TGG | 0.520699 | 4.1:-10774471 | MS.gene47989:CDS |
ATGGTTTGAAGGAAACAAGA+AGG | 0.523393 | 4.1:+10779263 | None:intergenic |
TTATTAACAGAGCCATCCCT+TGG | 0.525157 | 4.1:+10775882 | None:intergenic |
AGTACGAGGGTGCCACCAGC+TGG | 0.526696 | 4.1:+10775270 | None:intergenic |
TGGATTTGGATAAGAAGTCA+TGG | 0.530715 | 4.1:-10777665 | MS.gene47989:CDS |
AAGGTTTGAATGCTTGAAAG+TGG | 0.533582 | 4.1:+10776792 | None:intergenic |
CAGGTGTACGTTAGACCTGC+AGG | 0.533766 | 4.1:-10778918 | MS.gene47989:CDS |
TGACGTGGAACTTTGTTGCT+GGG | 0.538505 | 4.1:-10774554 | MS.gene47989:CDS |
GTGTCTACTTCTGCACCAGC+TGG | 0.540665 | 4.1:-10775285 | MS.gene47989:CDS |
GAATGGCGGAGGCGAGTGCG+CGG | 0.543708 | 4.1:+10779168 | None:intergenic |
GCTTTACTCCGAACACATGT+TGG | 0.544894 | 4.1:-10775324 | MS.gene47989:CDS |
GTTGTTGGAGGCAGAGTCGA+TGG | 0.546582 | 4.1:+10779060 | None:intergenic |
GAAGGAAACAAGAAGGGTTG+CGG | 0.547746 | 4.1:+10779270 | None:intergenic |
CATAACTCTCCAGTATCTCC+CGG | 0.547762 | 4.1:+10774520 | None:intergenic |
GGATTTGGATAAGAAGTCAT+GGG | 0.548844 | 4.1:-10777664 | MS.gene47989:CDS |
AACAGCATTTGATCTTTGAT+CGG | 0.550290 | 4.1:+10777587 | None:intergenic |
GATGCTGAGTCAGACGAAGA+AGG | 0.554252 | 4.1:-10778840 | MS.gene47989:CDS |
CCGATTCCGATGACGATCAC+CGG | 0.554284 | 4.1:-10779223 | MS.gene47989:CDS |
GGTTGAATAATCATGTATCT+GGG | 0.555450 | 4.1:-10777716 | MS.gene47989:CDS |
AATGGCGGAGGCGAGTGCGC+GGG | 0.556940 | 4.1:+10779169 | None:intergenic |
ACCTGCAGGTAGTTATGTGA+TGG | 0.557710 | 4.1:-10778904 | MS.gene47989:CDS |
AGATGCTCCACTTGGAGCTG+GGG | 0.559112 | 4.1:-10774463 | MS.gene47989:CDS |
TGGATCAACTGGAGCTGCGG+AGG | 0.559128 | 4.1:-10778884 | MS.gene47989:CDS |
TTACTCCGAACACATGTTGG+AGG | 0.561301 | 4.1:-10775321 | MS.gene47989:CDS |
TGTAGAACTTTGGCTTCCAA+TGG | 0.561959 | 4.1:-10774433 | MS.gene47989:CDS |
TTGTCAAATATACAGCATCC+TGG | 0.564184 | 4.1:+10776447 | None:intergenic |
GAGCGAGAGCTAAAGGTGGA+AGG | 0.564292 | 4.1:+10775799 | None:intergenic |
GCGGGTGGAGGAGAGGGTGA+GGG | 0.565308 | 4.1:+10779187 | None:intergenic |
TGGTTTGAAGGAAACAAGAA+GGG | 0.568078 | 4.1:+10779264 | None:intergenic |
TAAAGCTGTAGTTCTTCCCA+TGG | 0.568418 | 4.1:-10777823 | MS.gene47989:CDS |
TATTCGGATCAAGGATGAGC+CGG | 0.568439 | 4.1:-10777631 | MS.gene47989:CDS |
AACCAAGAAGCCAACAACAA+AGG | 0.570684 | 4.1:+10777791 | None:intergenic |
GTTGAGGATATCTTGCTGCT+AGG | 0.571641 | 4.1:-10776500 | MS.gene47989:CDS |
GAAAGAGATGAAGTTGTTGG+AGG | 0.572888 | 4.1:+10779048 | None:intergenic |
AGCGAGAGCTAAAGGTGGAA+GGG | 0.573231 | 4.1:+10775800 | None:intergenic |
TCCATCACATAACTACCTGC+AGG | 0.574411 | 4.1:+10778903 | None:intergenic |
GCGAGAGCTAAAGGTGGAAG+GGG | 0.575580 | 4.1:+10775801 | None:intergenic |
CTCGGCAGATCGCAATCCGG+AGG | 0.577786 | 4.1:+10778785 | None:intergenic |
ATGCATTCACTCACACCATA+CGG | 0.579978 | 4.1:-10774615 | MS.gene47989:CDS |
TTAGATAGTTCTCCAAGGGA+TGG | 0.580202 | 4.1:-10775894 | MS.gene47989:CDS |
GCAGCAGCACTAAGAGAAAG+TGG | 0.582809 | 4.1:+10775840 | None:intergenic |
GTTGAGATTTGAAGGTAAGT+GGG | 0.587743 | 4.1:+10779297 | None:intergenic |
GGTCTCGGCAGATCGCAATC+CGG | 0.588364 | 4.1:+10778782 | None:intergenic |
ATTGTTAGATAGTTCTCCAA+GGG | 0.588526 | 4.1:-10775898 | MS.gene47989:CDS |
GATTTCATATGACATTGTTG+AGG | 0.588742 | 4.1:-10776516 | MS.gene47989:CDS |
TCTACTTCTGCACCAGCTGG+TGG | 0.590389 | 4.1:-10775282 | MS.gene47989:CDS |
GATGCTCCACTTGGAGCTGG+GGG | 0.590416 | 4.1:-10774462 | MS.gene47989:CDS |
AAGGGGCATCTCTATATCCT+GGG | 0.593040 | 4.1:+10775818 | None:intergenic |
TGTGTGAAGGGTCAAAGTGA+TGG | 0.593563 | 4.1:-10777738 | MS.gene47989:CDS |
CCGAACACATGTTGGAGGAA+AGG | 0.593615 | 4.1:-10775316 | MS.gene47989:CDS |
GAGCTCGAAACTTGTGTGAA+GGG | 0.594588 | 4.1:-10777750 | MS.gene47989:CDS |
ACAAAGGGATGTTTAACCAT+GGG | 0.598210 | 4.1:+10777807 | None:intergenic |
CAAGTTTCGAGCTCCACCAA+TGG | 0.598526 | 4.1:+10777759 | None:intergenic |
GAATAATCATGTATCTGGGA+AGG | 0.600583 | 4.1:-10777712 | MS.gene47989:CDS |
GGAGACTTTACGAATGGCGG+AGG | 0.601002 | 4.1:+10779157 | None:intergenic |
ATAACTCTCCAGTATCTCCC+GGG | 0.614715 | 4.1:+10774521 | None:intergenic |
AACAAAGGGATGTTTAACCA+TGG | 0.615358 | 4.1:+10777806 | None:intergenic |
TCTTCTACAGCAGCTAGCAA+AGG | 0.616929 | 4.1:+10775387 | None:intergenic |
CTGACTCAGCATCTCCTCCA+GGG | 0.627098 | 4.1:+10778850 | None:intergenic |
GTGTGAAGGGTCAAAGTGAT+GGG | 0.633671 | 4.1:-10777737 | MS.gene47989:CDS |
AATTGTTAGATAGTTCTCCA+AGG | 0.634239 | 4.1:-10775899 | MS.gene47989:CDS |
AATACTTCAGAAACATTGCA+TGG | 0.636997 | 4.1:+10775486 | None:intergenic |
GGATCAACTGGAGCTGCGGA+GGG | 0.640471 | 4.1:-10778883 | MS.gene47989:CDS |
GGAGCTCGAAACTTGTGTGA+AGG | 0.642867 | 4.1:-10777751 | MS.gene47989:CDS |
GAGTCGCTGAGTGAACTCGA+CGG | 0.644857 | 4.1:+10779127 | None:intergenic |
AGTGGAGCATCTTTGGTCCG+GGG | 0.648290 | 4.1:+10774474 | None:intergenic |
CATCATCATCAATAAGTACG+AGG | 0.649335 | 4.1:+10775256 | None:intergenic |
TCGGCAGATCGCAATCCGGA+GGG | 0.650831 | 4.1:+10778786 | None:intergenic |
GCTCTCGCTCCACTACGACA+TGG | 0.656196 | 4.1:-10775786 | MS.gene47989:CDS |
CACCTGCAATTCGGAAAGTG+CGG | 0.659593 | 4.1:+10778761 | None:intergenic |
TACCTGATTCCATGTCGTAG+TGG | 0.661231 | 4.1:+10775777 | None:intergenic |
ATCATCATCAATAAGTACGA+GGG | 0.670541 | 4.1:+10775257 | None:intergenic |
GGTGGAGACTTTACGAATGG+CGG | 0.670767 | 4.1:+10779154 | None:intergenic |
GGATGCTGTATATTTGACAA+AGG | 0.675769 | 4.1:-10776444 | MS.gene47989:intron |
GGAGGTGGAGACTTTACGAA+TGG | 0.676470 | 4.1:+10779151 | None:intergenic |
GTCGCTGAGTGAACTCGACG+GGG | 0.676595 | 4.1:+10779129 | None:intergenic |
AGTGGAGCGAGAGCTAAAGG+TGG | 0.679241 | 4.1:+10775795 | None:intergenic |
TGTTACTTCAGCAATCAACA+TGG | 0.683428 | 4.1:-10776941 | MS.gene47989:CDS |
TGATGGATCAACTGGAGCTG+CGG | 0.683645 | 4.1:-10778887 | MS.gene47989:CDS |
GAATGCTTGAAAGTGGACCA+CGG | 0.687124 | 4.1:+10776799 | None:intergenic |
TCAAACACAAACCAGATCCG+TGG | 0.690750 | 4.1:-10776816 | MS.gene47989:intron |
TCGCTGAGTGAACTCGACGG+GGG | 0.697652 | 4.1:+10779130 | None:intergenic |
AGGGTTGCAGTGTACCCTGG+AGG | 0.708171 | 4.1:-10778864 | MS.gene47989:CDS |
CACACAAACAAAGAAAAGCG+AGG | 0.726712 | 4.1:-10776754 | MS.gene47989:intron |
TGGTTGAAGACAATATGACG+TGG | 0.731025 | 4.1:-10774569 | MS.gene47989:CDS |
TCGTGCGCATTATATCACCC+CGG | 0.768678 | 4.1:-10774491 | MS.gene47989:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTATTAAAATCAAATAAA+AGG | - | chr4.1:10777578-10777597 | MS.gene47989:CDS | 10.0% |
!! | AAAACAATATTATTACCTTT+AGG | - | chr4.1:10778117-10778136 | MS.gene47989:intron | 15.0% |
!! | AAACAATATTATTACCTTTA+GGG | - | chr4.1:10778118-10778137 | MS.gene47989:intron | 15.0% |
!! | TGAAGATAAAAAAATTTCAA+AGG | + | chr4.1:10777391-10777410 | None:intergenic | 15.0% |
!!! | GTTAAATTTTCGTATAATTT+AGG | - | chr4.1:10775732-10775751 | MS.gene47989:intron | 15.0% |
!! | AAAAAATTTCATATACCAGA+GGG | + | chr4.1:10775661-10775680 | None:intergenic | 20.0% |
!! | AAAAGGATCAATTATATCTT+GGG | - | chr4.1:10775560-10775579 | MS.gene47989:intron | 20.0% |
!! | AAATCAATCAAGAAAATGAA+TGG | - | chr4.1:10777779-10777798 | MS.gene47989:CDS | 20.0% |
!! | AGTTGTTAAATCTGATATAT+AGG | - | chr4.1:10779327-10779346 | MS.gene47989:CDS | 20.0% |
!! | CACAATTAATGATTAGAATA+AGG | + | chr4.1:10775479-10775498 | None:intergenic | 20.0% |
!! | CATAATTATATACACATTGA+AGG | + | chr4.1:10778043-10778062 | None:intergenic | 20.0% |
!! | GTTAATAAAATGCATAAATC+TGG | - | chr4.1:10777869-10777888 | MS.gene47989:intron | 20.0% |
!! | TTAAATTTATCTCGAAAAAC+AGG | + | chr4.1:10775598-10775617 | None:intergenic | 20.0% |
!! | TTAATTGATAAATTGCTGAA+CGG | - | chr4.1:10774774-10774793 | MS.gene47989:intron | 20.0% |
!! | TTATATTATTGATGCAACAT+TGG | + | chr4.1:10778099-10778118 | None:intergenic | 20.0% |
!! | TTATTTACTCTTATTGTTGT+TGG | - | chr4.1:10775830-10775849 | MS.gene47989:CDS | 20.0% |
!! | TTGAAATAAGAAAATAATGC+AGG | - | chr4.1:10777678-10777697 | MS.gene47989:CDS | 20.0% |
!!! | ATATTATTAGGGTGATTTTA+TGG | + | chr4.1:10778899-10778918 | None:intergenic | 20.0% |
!!! | TAACTTTAAAAGCACAAATT+CGG | + | chr4.1:10776373-10776392 | None:intergenic | 20.0% |
!!! | TGATTAGAATAAGGTTATTT+TGG | + | chr4.1:10775470-10775489 | None:intergenic | 20.0% |
!!! | TTCTATTTTCGTATACTTTA+GGG | - | chr4.1:10775783-10775802 | MS.gene47989:CDS | 20.0% |
!!! | TTTCTATTTTCGTATACTTT+AGG | - | chr4.1:10775782-10775801 | MS.gene47989:CDS | 20.0% |
! | AACTATTATCACACATATGT+GGG | - | chr4.1:10777325-10777344 | MS.gene47989:intron | 25.0% |
! | AAGGCACATTAATTGATTAT+TGG | + | chr4.1:10777372-10777391 | None:intergenic | 25.0% |
! | AATTATATACACATTGAAGG+TGG | + | chr4.1:10778040-10778059 | None:intergenic | 25.0% |
! | ACTCAATCAAAGAATTGTTT+AGG | + | chr4.1:10778997-10779016 | None:intergenic | 25.0% |
! | ATAATAACAGCAATGTTAAC+AGG | - | chr4.1:10775710-10775729 | MS.gene47989:intron | 25.0% |
! | ATAGGTTACATACATAAACA+TGG | + | chr4.1:10775512-10775531 | None:intergenic | 25.0% |
! | ATAGTTTATAGAGACCAAAT+TGG | + | chr4.1:10777564-10777583 | None:intergenic | 25.0% |
! | ATCAATCTAATTCATAGAAG+TGG | + | chr4.1:10776425-10776444 | None:intergenic | 25.0% |
! | ATTCGGAAAGGAAAAAAAAA+AGG | + | chr4.1:10776356-10776375 | None:intergenic | 25.0% |
! | ATTCTGATTCTGTTATGTTA+TGG | - | chr4.1:10775006-10775025 | MS.gene47989:intron | 25.0% |
! | CAAAGAATTGTTTAGGTAAA+GGG | + | chr4.1:10778990-10779009 | None:intergenic | 25.0% |
! | CTTGTAACATGTTTATAAGT+TGG | - | chr4.1:10775207-10775226 | MS.gene47989:intron | 25.0% |
! | GAAAAAATTTCATATACCAG+AGG | + | chr4.1:10775662-10775681 | None:intergenic | 25.0% |
! | GAAAAGGATCAATTATATCT+TGG | - | chr4.1:10775559-10775578 | MS.gene47989:intron | 25.0% |
! | GAAAGGAAAAAAAAAAGGAA+AGG | + | chr4.1:10776351-10776370 | None:intergenic | 25.0% |
! | GCTATAGAGAAATCAATTTA+AGG | + | chr4.1:10776476-10776495 | None:intergenic | 25.0% |
! | TAGTTAAACTACTAAAGAGT+AGG | - | chr4.1:10775620-10775639 | MS.gene47989:intron | 25.0% |
! | TATAAATTGACAGGATTCTA+GGG | + | chr4.1:10775693-10775712 | None:intergenic | 25.0% |
! | TCAAAAAGAAAATACCCTAA+AGG | + | chr4.1:10778135-10778154 | None:intergenic | 25.0% |
! | TCAAAGAATTGTTTAGGTAA+AGG | + | chr4.1:10778991-10779010 | None:intergenic | 25.0% |
! | TGCTGTTATTATAAATTGAC+AGG | + | chr4.1:10775702-10775721 | None:intergenic | 25.0% |
! | TTATAAATTGACAGGATTCT+AGG | + | chr4.1:10775694-10775713 | None:intergenic | 25.0% |
! | TTATTCATTCGTTGTGTAAT+TGG | - | chr4.1:10777163-10777182 | MS.gene47989:intron | 25.0% |
! | TTCTTATCCAAATCCAAAAA+AGG | + | chr4.1:10776067-10776086 | None:intergenic | 25.0% |
! | TTGGATGATAGTAAAGTTTA+GGG | + | chr4.1:10777605-10777624 | None:intergenic | 25.0% |
! | TTTGGAAGGAGATATTATTA+GGG | + | chr4.1:10778910-10778929 | None:intergenic | 25.0% |
!! | AACAATTTTCTTGTAGATCA+AGG | + | chr4.1:10777498-10777517 | None:intergenic | 25.0% |
!! | CTTTGTTTAGATAATGACAA+GGG | - | chr4.1:10776233-10776252 | MS.gene47989:intron | 25.0% |
!! | GTATGATATCTTTTAAACCT+AGG | - | chr4.1:10778961-10778980 | MS.gene47989:intron | 25.0% |
!! | TCTATTTTCGTATACTTTAG+GGG | - | chr4.1:10775784-10775803 | MS.gene47989:CDS | 25.0% |
!!! | ATTTTAACGATCAATACTTG+AGG | + | chr4.1:10775061-10775080 | None:intergenic | 25.0% |
!!! | CAATCTCTAGTTTGTTAAAA+AGG | + | chr4.1:10778570-10778589 | None:intergenic | 25.0% |
!!! | GGAAATTAGTGCTTATTTTT+TGG | - | chr4.1:10778771-10778790 | MS.gene47989:CDS | 25.0% |
!!! | TAAGGTTAGTTTTTGATACT+TGG | - | chr4.1:10776718-10776737 | MS.gene47989:intron | 25.0% |
!!! | TTAGTTTTTGATACTTGGTA+TGG | - | chr4.1:10776723-10776742 | MS.gene47989:intron | 25.0% |
!!! | TTTAGGGTATTTTCTTTTTG+AGG | - | chr4.1:10778134-10778153 | MS.gene47989:intron | 25.0% |
AAACTACTAAAGAGTAGGAA+TGG | - | chr4.1:10775625-10775644 | MS.gene47989:intron | 30.0% | |
AACAGCATTTGATCTTTGAT+CGG | + | chr4.1:10776152-10776171 | None:intergenic | 30.0% | |
AAGAAAATAATGCAGGTACA+TGG | - | chr4.1:10777685-10777704 | MS.gene47989:CDS | 30.0% | |
AATACTTCAGAAACATTGCA+TGG | + | chr4.1:10778253-10778272 | None:intergenic | 30.0% | |
AATCTAATTCATAGAAGTGG+TGG | + | chr4.1:10776422-10776441 | None:intergenic | 30.0% | |
AATGTTCTACAAGTACATAG+AGG | + | chr4.1:10777428-10777447 | None:intergenic | 30.0% | |
AATTGTTAGATAGTTCTCCA+AGG | - | chr4.1:10777837-10777856 | MS.gene47989:CDS | 30.0% | |
ACGATTTCATGACAGTTATA+AGG | - | chr4.1:10776700-10776719 | MS.gene47989:intron | 30.0% | |
ACTATTATCACACATATGTG+GGG | - | chr4.1:10777326-10777345 | MS.gene47989:intron | 30.0% | |
AGCAAAATTAGAACATGCTA+AGG | + | chr4.1:10776896-10776915 | None:intergenic | 30.0% | |
ATACTCTCACAGTAGAAAAA+TGG | + | chr4.1:10777645-10777664 | None:intergenic | 30.0% | |
ATCATCATCAATAAGTACGA+GGG | + | chr4.1:10778482-10778501 | None:intergenic | 30.0% | |
ATCTTATTCGTTTCCTTGAT+TGG | - | chr4.1:10777467-10777486 | MS.gene47989:intron | 30.0% | |
ATTGTTAGATAGTTCTCCAA+GGG | - | chr4.1:10777838-10777857 | MS.gene47989:CDS | 30.0% | |
CAACATTGGAGTTTATAAGA+CGG | + | chr4.1:10778085-10778104 | None:intergenic | 30.0% | |
CAACCTTAACCTACAATTAA+CGG | + | chr4.1:10775883-10775902 | None:intergenic | 30.0% | |
CAACTATTATCACACATATG+TGG | - | chr4.1:10777324-10777343 | MS.gene47989:intron | 30.0% | |
CACCTATACTACAAGATATT+GGG | + | chr4.1:10775536-10775555 | None:intergenic | 30.0% | |
GATTTCATATGACATTGTTG+AGG | - | chr4.1:10777220-10777239 | MS.gene47989:intron | 30.0% | |
GCACTAATTTCCTCAAAAAA+TGG | + | chr4.1:10778763-10778782 | None:intergenic | 30.0% | |
GGTTGAATAATCATGTATCT+GGG | - | chr4.1:10776020-10776039 | MS.gene47989:intron | 30.0% | |
GTTGGATGATAGTAAAGTTT+AGG | + | chr4.1:10777606-10777625 | None:intergenic | 30.0% | |
GTTTGGAAGGAGATATTATT+AGG | + | chr4.1:10778911-10778930 | None:intergenic | 30.0% | |
TAATGTCAGGATGAATAATC+TGG | - | chr4.1:10776823-10776842 | MS.gene47989:intron | 30.0% | |
TACTAACGTTTGGAAATAGA+GGG | + | chr4.1:10775394-10775413 | None:intergenic | 30.0% | |
TACTACAAGATATTGGGAAT+AGG | + | chr4.1:10775530-10775549 | None:intergenic | 30.0% | |
TCAGGTTTATATACTTCATC+TGG | - | chr4.1:10776210-10776229 | MS.gene47989:intron | 30.0% | |
TCATGAAATCGTACAACAAA+CGG | + | chr4.1:10776692-10776711 | None:intergenic | 30.0% | |
TCGCATCATTCAATAAACTA+GGG | - | chr4.1:10774749-10774768 | MS.gene47989:intron | 30.0% | |
TGACATAGTAAAGTTTAACC+AGG | + | chr4.1:10777093-10777112 | None:intergenic | 30.0% | |
TTATCCAAATCCAAAAAAGG+AGG | + | chr4.1:10776064-10776083 | None:intergenic | 30.0% | |
TTCCCAATATCTTGTAGTAT+AGG | - | chr4.1:10775531-10775550 | MS.gene47989:intron | 30.0% | |
TTCGCATCATTCAATAAACT+AGG | - | chr4.1:10774748-10774767 | MS.gene47989:intron | 30.0% | |
! | AGAGTTTTTGTCTAATATGC+AGG | - | chr4.1:10777733-10777752 | MS.gene47989:CDS | 30.0% |
! | ATTTGGAACGTTTAATTCCA+TGG | - | chr4.1:10778646-10778665 | MS.gene47989:intron | 30.0% |
! | TACTCTTATTGTTGTTGGTA+AGG | - | chr4.1:10775835-10775854 | MS.gene47989:CDS | 30.0% |
! | TGTTGTTGTTGTAATTCCAT+GGG | - | chr4.1:10778710-10778729 | MS.gene47989:intron | 30.0% |
! | TTAAAAGCACAAATTCGGAA+AGG | + | chr4.1:10776368-10776387 | None:intergenic | 30.0% |
! | TTGTTGTTGTTGTAATTCCA+TGG | - | chr4.1:10778709-10778728 | MS.gene47989:intron | 30.0% |
! | TTTGGAACGTTTAATTCCAT+GGG | - | chr4.1:10778647-10778666 | MS.gene47989:intron | 30.0% |
!! | ATGCAATGTTTCTGAAGTAT+TGG | - | chr4.1:10778252-10778271 | MS.gene47989:intron | 30.0% |
!! | GCTTTGTTTAGATAATGACA+AGG | - | chr4.1:10776232-10776251 | MS.gene47989:intron | 30.0% |
!!! | TATGCTTTTTTGTTGATGTC+AGG | - | chr4.1:10778223-10778242 | MS.gene47989:intron | 30.0% |
!!! | TTATTCACTTCCTCCTTTTT+TGG | - | chr4.1:10776051-10776070 | MS.gene47989:intron | 30.0% |
AAAAACATTCTCATGACCTG+TGG | - | chr4.1:10778619-10778638 | MS.gene47989:intron | 35.0% | |
AAAACATTCTCATGACCTGT+GGG | - | chr4.1:10778620-10778639 | MS.gene47989:intron | 35.0% | |
AACAAAGGGATGTTTAACCA+TGG | + | chr4.1:10775933-10775952 | None:intergenic | 35.0% | |
AACCTTAAGCTACTAACGTT+TGG | + | chr4.1:10775404-10775423 | None:intergenic | 35.0% | |
AAGGTTTGAATGCTTGAAAG+TGG | + | chr4.1:10776947-10776966 | None:intergenic | 35.0% | |
AATTCAGACTATTCGGATCA+AGG | - | chr4.1:10776096-10776115 | MS.gene47989:intron | 35.0% | |
AATTGAGTACGTTGTTGCAA+GGG | - | chr4.1:10779046-10779065 | MS.gene47989:CDS | 35.0% | |
ACAAAGGGATGTTTAACCAT+GGG | + | chr4.1:10775932-10775951 | None:intergenic | 35.0% | |
ACTTTCAAGCATTCAAACCT+TGG | - | chr4.1:10776946-10776965 | MS.gene47989:CDS | 35.0% | |
AGAACTACAGCTTTACATTC+AGG | + | chr4.1:10775908-10775927 | None:intergenic | 35.0% | |
AGGTTAGAAAGAGTGACTTA+TGG | + | chr4.1:10777073-10777092 | None:intergenic | 35.0% | |
ATAAGTCACTCTTTCTAACC+TGG | - | chr4.1:10777072-10777091 | MS.gene47989:intron | 35.0% | |
ATGGTTTGAAGGAAACAAGA+AGG | + | chr4.1:10774476-10774495 | None:intergenic | 35.0% | |
CAACATGGCAAAATAATGTC+AGG | - | chr4.1:10776810-10776829 | MS.gene47989:intron | 35.0% | |
CATCATCATCAATAAGTACG+AGG | + | chr4.1:10778483-10778502 | None:intergenic | 35.0% | |
CATGGGAAATTCAGACTATT+CGG | - | chr4.1:10776089-10776108 | MS.gene47989:intron | 35.0% | |
CCAATATCTTGTAGTATAGG+TGG | - | chr4.1:10775534-10775553 | MS.gene47989:intron | 35.0% | |
CCACCTATACTACAAGATAT+TGG | + | chr4.1:10775537-10775556 | None:intergenic | 35.0% | |
CTACTAACGTTTGGAAATAG+AGG | + | chr4.1:10775395-10775414 | None:intergenic | 35.0% | |
CTTTCAAGCATTCAAACCTT+GGG | - | chr4.1:10776947-10776966 | MS.gene47989:CDS | 35.0% | |
GAATAATCATGTATCTGGGA+AGG | - | chr4.1:10776024-10776043 | MS.gene47989:intron | 35.0% | |
GATCAAGGAAAATCCAATCA+AGG | + | chr4.1:10777483-10777502 | None:intergenic | 35.0% | |
GATTGAGTACTTTGTTGCAA+GGG | - | chr4.1:10779009-10779028 | MS.gene47989:intron | 35.0% | |
GGATGCTGTATATTTGACAA+AGG | - | chr4.1:10777292-10777311 | MS.gene47989:intron | 35.0% | |
GGATTTGGATAAGAAGTCAT+GGG | - | chr4.1:10776072-10776091 | MS.gene47989:intron | 35.0% | |
GGGTTGAATAATCATGTATC+TGG | - | chr4.1:10776019-10776038 | MS.gene47989:intron | 35.0% | |
GTAACATTGCTTTCTGCAAA+CGG | + | chr4.1:10776781-10776800 | None:intergenic | 35.0% | |
GTACAACAAACGGCTATAAA+GGG | + | chr4.1:10776682-10776701 | None:intergenic | 35.0% | |
GTTACCATATAGTGCATATC+AGG | + | chr4.1:10778508-10778527 | None:intergenic | 35.0% | |
GTTGAGATTTGAAGGTAAGT+GGG | + | chr4.1:10774442-10774461 | None:intergenic | 35.0% | |
TAATTGAGTACGTTGTTGCA+AGG | - | chr4.1:10779045-10779064 | MS.gene47989:CDS | 35.0% | |
TACTAAAGAGTAGGAATGGA+GGG | - | chr4.1:10775629-10775648 | MS.gene47989:intron | 35.0% | |
TATGGCATATGTTATGGATC+AGG | - | chr4.1:10776192-10776211 | MS.gene47989:intron | 35.0% | |
TATGTCAGTTCTATAACGAG+TGG | - | chr4.1:10777106-10777125 | MS.gene47989:intron | 35.0% | |
TCAGATTTAACAACTGCCAT+TGG | + | chr4.1:10779322-10779341 | None:intergenic | 35.0% | |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr4.1:10776582-10776601 | MS.gene47989:intron | 35.0% | |
TGACCGTTAATTGTAGGTTA+AGG | - | chr4.1:10775877-10775896 | MS.gene47989:CDS | 35.0% | |
TGATTGAGTACTTTGTTGCA+AGG | - | chr4.1:10779008-10779027 | MS.gene47989:intron | 35.0% | |
TGCTAAGGCTAAGAATAAAG+AGG | + | chr4.1:10776881-10776900 | None:intergenic | 35.0% | |
TGGATTTGGATAAGAAGTCA+TGG | - | chr4.1:10776071-10776090 | MS.gene47989:intron | 35.0% | |
TGGTTTGAAGGAAACAAGAA+GGG | + | chr4.1:10774475-10774494 | None:intergenic | 35.0% | |
TGTAGTATAGGTGGAAGAAA+AGG | - | chr4.1:10775543-10775562 | MS.gene47989:intron | 35.0% | |
TTAACCTACAATTAACGGTC+AGG | + | chr4.1:10775878-10775897 | None:intergenic | 35.0% | |
TTCCAAACGTTAGTAGCTTA+AGG | - | chr4.1:10775399-10775418 | MS.gene47989:CDS | 35.0% | |
TTCGAAAGAGATGAAGTTGT+TGG | + | chr4.1:10774694-10774713 | None:intergenic | 35.0% | |
TTGCAAGGGATTTGTGAAAA+TGG | - | chr4.1:10779060-10779079 | MS.gene47989:CDS | 35.0% | |
TTGGTATGGACCTAAATTTC+TGG | - | chr4.1:10776737-10776756 | MS.gene47989:intron | 35.0% | |
TTGTCAAATATACAGCATCC+TGG | + | chr4.1:10777292-10777311 | None:intergenic | 35.0% | |
! | AAAAAGGAAAGTGCATAAGC+AGG | + | chr4.1:10778554-10778573 | None:intergenic | 35.0% |
! | AAAAGGAAAGTGCATAAGCA+GGG | + | chr4.1:10778553-10778572 | None:intergenic | 35.0% |
! | CTTATTGTTGTTGGTAAGGA+GGG | - | chr4.1:10775839-10775858 | MS.gene47989:CDS | 35.0% |
! | GTTAAACATCCCTTTGTTGT+TGG | - | chr4.1:10775935-10775954 | MS.gene47989:CDS | 35.0% |
! | TCACACTTCTTGGATTTTGT+TGG | - | chr4.1:10776298-10776317 | MS.gene47989:intron | 35.0% |
! | TCTTATTGTTGTTGGTAAGG+AGG | - | chr4.1:10775838-10775857 | MS.gene47989:CDS | 35.0% |
! | TGTTACTTCAGCAATCAACA+TGG | - | chr4.1:10776795-10776814 | MS.gene47989:CDS | 35.0% |
!! | AGTCATTTTAATGTTCCCTC+CGG | - | chr4.1:10774935-10774954 | MS.gene47989:intron | 35.0% |
!! | CTCGTACTTATTGATGATGA+TGG | - | chr4.1:10778481-10778500 | MS.gene47989:intron | 35.0% |
!! | TAGTTATGTGATGGATCAAC+TGG | - | chr4.1:10774841-10774860 | MS.gene47989:intron | 35.0% |
!! | TTTTCTTTGTTTGTGTGGAC+AGG | + | chr4.1:10776979-10776998 | None:intergenic | 35.0% |
!!! | ACAACTGATGCCATTTTTTG+AGG | - | chr4.1:10778750-10778769 | MS.gene47989:intron | 35.0% |
!!! | ACTTCCTCCTTTTTTGGATT+TGG | - | chr4.1:10776057-10776076 | MS.gene47989:intron | 35.0% |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr4.1:10776583-10776602 | None:intergenic | 35.0% |
AAACATTCTCATGACCTGTG+GGG | - | chr4.1:10778621-10778640 | MS.gene47989:intron | 40.0% | |
AAAGTTGCATACAGTACGTG+GGG | + | chr4.1:10778827-10778846 | None:intergenic | 40.0% | |
AACCAAGAAGCCAACAACAA+AGG | + | chr4.1:10775948-10775967 | None:intergenic | 40.0% | |
AACGTTTAATTCCATGGGCT+GGG | - | chr4.1:10778652-10778671 | MS.gene47989:intron | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr4.1:10776576-10776595 | MS.gene47989:intron | 40.0% | |
ACCAAGAAGCCAACAACAAA+GGG | + | chr4.1:10775947-10775966 | None:intergenic | 40.0% | |
ACGAACCGATAAGAACGATT+CGG | + | chr4.1:10774726-10774745 | None:intergenic | 40.0% | |
AGAACTCTTGGCTGAAGATA+TGG | - | chr4.1:10779147-10779166 | MS.gene47989:CDS | 40.0% | |
AGAGTGACTTATGGCAGATA+TGG | + | chr4.1:10777064-10777083 | None:intergenic | 40.0% | |
ATGCATTCACTCACACCATA+CGG | - | chr4.1:10779121-10779140 | MS.gene47989:CDS | 40.0% | |
CAAAGTTGCATACAGTACGT+GGG | + | chr4.1:10778828-10778847 | None:intergenic | 40.0% | |
CACACAAACAAAGAAAAGCG+AGG | - | chr4.1:10776982-10777001 | MS.gene47989:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr4.1:10776577-10776596 | MS.gene47989:intron | 40.0% | |
CGTACAACAAACGGCTATAA+AGG | + | chr4.1:10776683-10776702 | None:intergenic | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr4.1:10776608-10776627 | MS.gene47989:intron | 40.0% | |
CGTTGAGATTTGAAGGTAAG+TGG | + | chr4.1:10774443-10774462 | None:intergenic | 40.0% | |
CTACTAAAGAGTAGGAATGG+AGG | - | chr4.1:10775628-10775647 | MS.gene47989:intron | 40.0% | |
CTCGAAAAACATCGCAGAAA+CGG | - | chr4.1:10774629-10774648 | MS.gene47989:intron | 40.0% | |
GAAAGAGATGAAGTTGTTGG+AGG | + | chr4.1:10774691-10774710 | None:intergenic | 40.0% | |
GATATGCTTGTCACACTTCT+TGG | - | chr4.1:10776288-10776307 | MS.gene47989:intron | 40.0% | |
GGGTAAGTCTATGAAGATGT+GGG | - | chr4.1:10778869-10778888 | MS.gene47989:CDS | 40.0% | |
GGTAAGTCTATGAAGATGTG+GGG | - | chr4.1:10778870-10778889 | MS.gene47989:CDS | 40.0% | |
GGTCAGTAGAAACTTTGAGT+TGG | + | chr4.1:10777624-10777643 | None:intergenic | 40.0% | |
GTGAAGTTGCACATATCAAC+CGG | + | chr4.1:10776127-10776146 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | - | chr4.1:10776532-10776551 | MS.gene47989:intron | 40.0% | |
GTTTAGGTAAAGGGTTTCCT+AGG | + | chr4.1:10778981-10779000 | None:intergenic | 40.0% | |
TAAAGCTGTAGTTCTTCCCA+TGG | - | chr4.1:10775913-10775932 | MS.gene47989:CDS | 40.0% | |
TAACGAGTGGTTAATAAGCC+AGG | - | chr4.1:10777119-10777138 | MS.gene47989:intron | 40.0% | |
TAGAGACCAAATTGGTGAGA+TGG | + | chr4.1:10777556-10777575 | None:intergenic | 40.0% | |
TATACTGTCTATACAGCCCA+TGG | + | chr4.1:10778729-10778748 | None:intergenic | 40.0% | |
TCTGGCTATGGCATATGTTA+TGG | - | chr4.1:10776186-10776205 | MS.gene47989:intron | 40.0% | |
TGGAATCAGGTAGGTTTGAT+TGG | - | chr4.1:10777970-10777989 | MS.gene47989:intron | 40.0% | |
TGGACCTGATATGCACTATA+TGG | - | chr4.1:10778501-10778520 | MS.gene47989:intron | 40.0% | |
TGGTTGAAGACAATATGACG+TGG | - | chr4.1:10779167-10779186 | MS.gene47989:CDS | 40.0% | |
TGTTGACATTTCACAGTCTC+TGG | - | chr4.1:10776168-10776187 | MS.gene47989:intron | 40.0% | |
TTAGATAGTTCTCCAAGGGA+TGG | - | chr4.1:10777842-10777861 | MS.gene47989:CDS | 40.0% | |
TTATTAACAGAGCCATCCCT+TGG | + | chr4.1:10777857-10777876 | None:intergenic | 40.0% | |
TTGTGCAGCAAGGAAATGTT+TGG | + | chr4.1:10778928-10778947 | None:intergenic | 40.0% | |
! | AAAGGAAAGTGCATAAGCAG+GGG | + | chr4.1:10778552-10778571 | None:intergenic | 40.0% |
! | CTTCTTGGATTTTGTTGGAG+TGG | - | chr4.1:10776303-10776322 | MS.gene47989:intron | 40.0% |
! | TCTCTATAGCCGTTTGTTGA+GGG | - | chr4.1:10776486-10776505 | MS.gene47989:CDS | 40.0% |
! | TGTAGAACTTTGGCTTCCAA+TGG | - | chr4.1:10779303-10779322 | MS.gene47989:CDS | 40.0% |
! | TTCTCTATAGCCGTTTGTTG+AGG | - | chr4.1:10776485-10776504 | MS.gene47989:CDS | 40.0% |
!! | CGTTTTTGATTCTGAGCAAG+AGG | + | chr4.1:10778301-10778320 | None:intergenic | 40.0% |
!! | CTCGCTTTTCTTTGTTTGTG+TGG | + | chr4.1:10776984-10777003 | None:intergenic | 40.0% |
!! | GACCTAAATTTCTGGCTCAT+CGG | - | chr4.1:10776745-10776764 | MS.gene47989:intron | 40.0% |
!! | TCGTTTTTGTTGTGTTGTGC+AGG | - | chr4.1:10774799-10774818 | MS.gene47989:intron | 40.0% |
!! | TTCTGAAGTATTGGCAGACT+TGG | - | chr4.1:10778261-10778280 | MS.gene47989:intron | 40.0% |
AAACTCTACATCAGACGCAC+TGG | + | chr4.1:10777720-10777739 | None:intergenic | 45.0% | |
AACGTTCCAAATTTCCCCAC+AGG | + | chr4.1:10778638-10778657 | None:intergenic | 45.0% | |
AACTTCGCCATCTCATCAGT+TGG | + | chr4.1:10777145-10777164 | None:intergenic | 45.0% | |
ACCATACGGACAAGAACTCT+TGG | - | chr4.1:10779135-10779154 | MS.gene47989:CDS | 45.0% | |
ACCTGCAGGTAGTTATGTGA+TGG | - | chr4.1:10774832-10774851 | MS.gene47989:intron | 45.0% | |
ACTACGACATGGAATCAGGT+AGG | - | chr4.1:10777961-10777980 | MS.gene47989:intron | 45.0% | |
AGACGGCAGAATTCACAGAA+TGG | + | chr4.1:10778068-10778087 | None:intergenic | 45.0% | |
ATAACTCTCCAGTATCTCCC+GGG | + | chr4.1:10779218-10779237 | None:intergenic | 45.0% | |
ATACAGCATCCTGGAGTTGT+TGG | + | chr4.1:10777283-10777302 | None:intergenic | 45.0% | |
ATGACGTGGAACTTTGTTGC+TGG | - | chr4.1:10779181-10779200 | MS.gene47989:CDS | 45.0% | |
ATGCTTCGCAGTAGTATCTC+GGG | - | chr4.1:10778849-10778868 | MS.gene47989:CDS | 45.0% | |
ATTGTTCCGGTGATCGTCAT+CGG | + | chr4.1:10774522-10774541 | None:intergenic | 45.0% | |
CAAGGTTACCCCTCAACAAA+CGG | + | chr4.1:10776498-10776517 | None:intergenic | 45.0% | |
CAATAAGGTTGCTGAAAGCC+TGG | + | chr4.1:10778387-10778406 | None:intergenic | 45.0% | |
CACCGATGAGCCAGAAATTT+AGG | + | chr4.1:10776750-10776769 | None:intergenic | 45.0% | |
CATAACTCTCCAGTATCTCC+CGG | + | chr4.1:10779219-10779238 | None:intergenic | 45.0% | |
CATGCTTCGCAGTAGTATCT+CGG | - | chr4.1:10778848-10778867 | MS.gene47989:CDS | 45.0% | |
CATTTCACAGTCTCTGGCTA+TGG | - | chr4.1:10776174-10776193 | MS.gene47989:intron | 45.0% | |
CCTTTCCTCCAACATGTGTT+CGG | + | chr4.1:10778423-10778442 | None:intergenic | 45.0% | |
CGAACCGATAAGAACGATTC+GGG | + | chr4.1:10774725-10774744 | None:intergenic | 45.0% | |
CGGGTAAGTCTATGAAGATG+TGG | - | chr4.1:10778868-10778887 | MS.gene47989:CDS | 45.0% | |
CGTTCCCGAATCGTTCTTAT+CGG | - | chr4.1:10774718-10774737 | MS.gene47989:intron | 45.0% | |
CTGTCACCATCTCACCAATT+TGG | - | chr4.1:10777547-10777566 | MS.gene47989:CDS | 45.0% | |
GAACGTTTAATTCCATGGGC+TGG | - | chr4.1:10778651-10778670 | MS.gene47989:intron | 45.0% | |
GAAGGAAACAAGAAGGGTTG+CGG | + | chr4.1:10774469-10774488 | None:intergenic | 45.0% | |
GAATGCTTGAAAGTGGACCA+CGG | + | chr4.1:10776940-10776959 | None:intergenic | 45.0% | |
GAGCTCGAAACTTGTGTGAA+GGG | - | chr4.1:10775986-10776005 | MS.gene47989:intron | 45.0% | |
GCAAAGTTGCATACAGTACG+TGG | + | chr4.1:10778829-10778848 | None:intergenic | 45.0% | |
GCAGCAAGGAAATGTTTGGA+AGG | + | chr4.1:10778924-10778943 | None:intergenic | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr4.1:10776607-10776626 | MS.gene47989:intron | 45.0% | |
GCTCAAATCTTTGTGCAGCA+AGG | + | chr4.1:10778938-10778957 | None:intergenic | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr4.1:10776604-10776623 | MS.gene47989:intron | 45.0% | |
GCTTTACTCCGAACACATGT+TGG | - | chr4.1:10778412-10778431 | MS.gene47989:intron | 45.0% | |
GGTGAGATGGTGACAGTTTA+GGG | + | chr4.1:10777543-10777562 | None:intergenic | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | - | chr4.1:10776538-10776557 | MS.gene47989:intron | 45.0% | |
GTGTGAAGGGTCAAAGTGAT+GGG | - | chr4.1:10775999-10776018 | MS.gene47989:intron | 45.0% | |
GTTGAGGATATCTTGCTGCT+AGG | - | chr4.1:10777236-10777255 | MS.gene47989:intron | 45.0% | |
TACCTGATTCCATGTCGTAG+TGG | + | chr4.1:10777962-10777981 | None:intergenic | 45.0% | |
TATTCGGATCAAGGATGAGC+CGG | - | chr4.1:10776105-10776124 | MS.gene47989:intron | 45.0% | |
TCAAACACAAACCAGATCCG+TGG | - | chr4.1:10776920-10776939 | MS.gene47989:CDS | 45.0% | |
TCATGACCTGTGGGGAAATT+TGG | - | chr4.1:10778629-10778648 | MS.gene47989:intron | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | - | chr4.1:10776539-10776558 | MS.gene47989:intron | 45.0% | |
TCCATCACATAACTACCTGC+AGG | + | chr4.1:10774836-10774855 | None:intergenic | 45.0% | |
TCTTCTACAGCAGCTAGCAA+AGG | + | chr4.1:10778352-10778371 | None:intergenic | 45.0% | |
TGACGTGGAACTTTGTTGCT+GGG | - | chr4.1:10779182-10779201 | MS.gene47989:CDS | 45.0% | |
TGAGCAACACACCTGCAATT+CGG | + | chr4.1:10774987-10775006 | None:intergenic | 45.0% | |
TGAGCCTGACCGTTAATTGT+AGG | - | chr4.1:10775871-10775890 | MS.gene47989:CDS | 45.0% | |
TGATGTTCTCCAACAACTCC+AGG | - | chr4.1:10777271-10777290 | MS.gene47989:intron | 45.0% | |
TGGTGAGATGGTGACAGTTT+AGG | + | chr4.1:10777544-10777563 | None:intergenic | 45.0% | |
TGTGTGAAGGGTCAAAGTGA+TGG | - | chr4.1:10775998-10776017 | MS.gene47989:intron | 45.0% | |
TTACTCCGAACACATGTTGG+AGG | - | chr4.1:10778415-10778434 | MS.gene47989:intron | 45.0% | |
! | AAGCCTTATCCCACTAAGTG+GGG | + | chr4.1:10778680-10778699 | None:intergenic | 45.0% |
! | CAAGCCTTATCCCACTAAGT+GGG | + | chr4.1:10778681-10778700 | None:intergenic | 45.0% |
! | CGGATCTGGTTTGTGTTTGA+AGG | + | chr4.1:10776920-10776939 | None:intergenic | 45.0% |
! | CTCTATAGCCGTTTGTTGAG+GGG | - | chr4.1:10776487-10776506 | MS.gene47989:CDS | 45.0% |
! | GTATACTTTAGGGGCTGAGT+AGG | - | chr4.1:10775793-10775812 | MS.gene47989:CDS | 45.0% |
! | TGTGGACAGGATTTTACCCA+AGG | + | chr4.1:10776966-10776985 | None:intergenic | 45.0% |
! | TTACACAAGAGGCTGTTTCC+AGG | + | chr4.1:10776572-10776591 | None:intergenic | 45.0% |
!! | AAGGGGCATCTCTATATCCT+GGG | + | chr4.1:10777921-10777940 | None:intergenic | 45.0% |
!! | GGTTAGCGTTGATGGTTTGA+AGG | + | chr4.1:10774487-10774506 | None:intergenic | 45.0% |
!! | TCCCTTTGTTGTTGGCTTCT+TGG | - | chr4.1:10775943-10775962 | MS.gene47989:CDS | 45.0% |
AAAGATGCTCCACTTGGAGC+TGG | - | chr4.1:10779271-10779290 | MS.gene47989:CDS | 50.0% | |
AACGGCTATAAAGGGCAACC+CGG | + | chr4.1:10776674-10776693 | None:intergenic | 50.0% | |
AAGATGCTCCACTTGGAGCT+GGG | - | chr4.1:10779272-10779291 | MS.gene47989:CDS | 50.0% | |
AGCGAGAGCTAAAGGTGGAA+GGG | + | chr4.1:10777939-10777958 | None:intergenic | 50.0% | |
AGGCAGAGTCGATGGAAATC+GGG | + | chr4.1:10774671-10774690 | None:intergenic | 50.0% | |
AGTCGATGGAAATCGGGACT+AGG | + | chr4.1:10774665-10774684 | None:intergenic | 50.0% | |
CAACTTTACCAGTTGCGCCA+AGG | + | chr4.1:10776516-10776535 | None:intergenic | 50.0% | |
CAAGTTTCGAGCTCCACCAA+TGG | + | chr4.1:10775980-10775999 | None:intergenic | 50.0% | |
CACCTGCAATTCGGAAAGTG+CGG | + | chr4.1:10774978-10774997 | None:intergenic | 50.0% | |
CCACTTAGTGGGATAAGGCT+TGG | - | chr4.1:10778679-10778698 | MS.gene47989:intron | 50.0% | |
CCGAACACATGTTGGAGGAA+AGG | - | chr4.1:10778420-10778439 | MS.gene47989:intron | 50.0% | |
CGGGAGATACTGGAGAGTTA+TGG | - | chr4.1:10779217-10779236 | MS.gene47989:CDS | 50.0% | |
CGTCATCGGAATCGGAGTTA+GGG | + | chr4.1:10774508-10774527 | None:intergenic | 50.0% | |
CTCCACTACGACATGGAATC+AGG | - | chr4.1:10777957-10777976 | MS.gene47989:intron | 50.0% | |
CTTGGTTGCTGAGCTTCCAT+TGG | - | chr4.1:10775961-10775980 | MS.gene47989:CDS | 50.0% | |
GAGGCAGAGTCGATGGAAAT+CGG | + | chr4.1:10774672-10774691 | None:intergenic | 50.0% | |
GATGCTGAGTCAGACGAAGA+AGG | - | chr4.1:10774896-10774915 | MS.gene47989:intron | 50.0% | |
GCAGCAGCACTAAGAGAAAG+TGG | + | chr4.1:10777899-10777918 | None:intergenic | 50.0% | |
GCCAAGAGTTCTTGTCCGTA+TGG | + | chr4.1:10779139-10779158 | None:intergenic | 50.0% | |
GCGGCATCGTTGAGATTTGA+AGG | + | chr4.1:10774450-10774469 | None:intergenic | 50.0% | |
GGAGCTCGAAACTTGTGTGA+AGG | - | chr4.1:10775985-10776004 | MS.gene47989:intron | 50.0% | |
GGAGGTGGAGACTTTACGAA+TGG | + | chr4.1:10774588-10774607 | None:intergenic | 50.0% | |
GGGGAACTCGTGTAGAACTT+TGG | - | chr4.1:10779293-10779312 | MS.gene47989:CDS | 50.0% | |
GGTGGAGACTTTACGAATGG+CGG | + | chr4.1:10774585-10774604 | None:intergenic | 50.0% | |
GTACCCCACTTAGTGGGATA+AGG | - | chr4.1:10778674-10778693 | MS.gene47989:intron | 50.0% | |
TCGTCATCGGAATCGGAGTT+AGG | + | chr4.1:10774509-10774528 | None:intergenic | 50.0% | |
TCGTGCGCATTATATCACCC+CGG | - | chr4.1:10779245-10779264 | MS.gene47989:CDS | 50.0% | |
TTGAAAGTGGACCACGGATC+TGG | + | chr4.1:10776934-10776953 | None:intergenic | 50.0% | |
! | AAGTGGAGCATCTTTGGTCC+GGG | + | chr4.1:10779266-10779285 | None:intergenic | 50.0% |
! | AGCTCCAAGTGGAGCATCTT+TGG | + | chr4.1:10779272-10779291 | None:intergenic | 50.0% |
! | CAAGTGGAGCATCTTTGGTC+CGG | + | chr4.1:10779267-10779286 | None:intergenic | 50.0% |
! | CAATTCGGAAAGTGCGGTCT+CGG | + | chr4.1:10774972-10774991 | None:intergenic | 50.0% |
! | CCAAGCCTTATCCCACTAAG+TGG | + | chr4.1:10778682-10778701 | None:intergenic | 50.0% |
! | CGTTTGTTGAGGGGTAACCT+TGG | - | chr4.1:10776496-10776515 | MS.gene47989:CDS | 50.0% |
! | GGAGTTAGGGTTAGCGTTGA+TGG | + | chr4.1:10774495-10774514 | None:intergenic | 50.0% |
! | GTGGGATAAGGCTTGGTTGT+TGG | - | chr4.1:10778686-10778705 | MS.gene47989:intron | 50.0% |
! | TGATGGATCAACTGGAGCTG+CGG | - | chr4.1:10774849-10774868 | MS.gene47989:intron | 50.0% |
!! | GAAGGGGCATCTCTATATCC+TGG | + | chr4.1:10777922-10777941 | None:intergenic | 50.0% |
!! | TGAGGGTGGTGGAATTGTTC+CGG | + | chr4.1:10774535-10774554 | None:intergenic | 50.0% |
AAGGTCACGGGTTCAAGTCC+TGG | - | chr4.1:10776551-10776570 | MS.gene47989:intron | 55.0% | |
AATGGAGGGAGTAGTCCCTC+TGG | - | chr4.1:10775643-10775662 | MS.gene47989:intron | 55.0% | |
AGATGCTCCACTTGGAGCTG+GGG | - | chr4.1:10779273-10779292 | MS.gene47989:CDS | 55.0% | |
AGCCAGGCCAACTGATGAGA+TGG | - | chr4.1:10777135-10777154 | MS.gene47989:intron | 55.0% | |
AGTCGCTGAGTGAACTCGAC+GGG | + | chr4.1:10774611-10774630 | None:intergenic | 55.0% | |
AGTGGAGCGAGAGCTAAAGG+TGG | + | chr4.1:10777944-10777963 | None:intergenic | 55.0% | |
CAGGTGTACGTTAGACCTGC+AGG | - | chr4.1:10774818-10774837 | MS.gene47989:intron | 55.0% | |
CCGATTCCGATGACGATCAC+CGG | - | chr4.1:10774513-10774532 | MS.gene47989:CDS | 55.0% | |
CCGGTGATCGTCATCGGAAT+CGG | + | chr4.1:10774516-10774535 | None:intergenic | 55.0% | |
CGGACCAAAGATGCTCCACT+TGG | - | chr4.1:10779265-10779284 | MS.gene47989:CDS | 55.0% | |
CTGACTCAGCATCTCCTCCA+GGG | + | chr4.1:10774889-10774908 | None:intergenic | 55.0% | |
GACCGCACTTTCCGAATTGC+AGG | - | chr4.1:10774973-10774992 | MS.gene47989:intron | 55.0% | |
GACTATTGCCCGGGAGATAC+TGG | - | chr4.1:10779207-10779226 | MS.gene47989:CDS | 55.0% | |
GAGCGAGAGCTAAAGGTGGA+AGG | + | chr4.1:10777940-10777959 | None:intergenic | 55.0% | |
GAGTCGCTGAGTGAACTCGA+CGG | + | chr4.1:10774612-10774631 | None:intergenic | 55.0% | |
GCGAGAGCTAAAGGTGGAAG+GGG | + | chr4.1:10777938-10777957 | None:intergenic | 55.0% | |
GGAGACTTTACGAATGGCGG+AGG | + | chr4.1:10774582-10774601 | None:intergenic | 55.0% | |
GGTTGCTGAGCTTCCATTGG+TGG | - | chr4.1:10775964-10775983 | MS.gene47989:CDS | 55.0% | |
GTGTCTACTTCTGCACCAGC+TGG | - | chr4.1:10778451-10778470 | MS.gene47989:intron | 55.0% | |
GTTGTTGGAGGCAGAGTCGA+TGG | + | chr4.1:10774679-10774698 | None:intergenic | 55.0% | |
TCTACTTCTGCACCAGCTGG+TGG | - | chr4.1:10778454-10778473 | MS.gene47989:intron | 55.0% | |
TCTGACTCAGCATCTCCTCC+AGG | + | chr4.1:10774890-10774909 | None:intergenic | 55.0% | |
TTGCTGGGCTGACTATTGCC+CGG | - | chr4.1:10779197-10779216 | MS.gene47989:CDS | 55.0% | |
! | AGTGGAGCATCTTTGGTCCG+GGG | + | chr4.1:10779265-10779284 | None:intergenic | 55.0% |
! | CGTAGTGGAGCGAGAGCTAA+AGG | + | chr4.1:10777947-10777966 | None:intergenic | 55.0% |
! | TTCTCTTAGTGCTGCTGCCC+AGG | - | chr4.1:10777901-10777920 | MS.gene47989:intron | 55.0% |
ACTGAAGCTCCCGCATACGC+AGG | + | chr4.1:10776648-10776667 | None:intergenic | 60.0% | |
AGAAGAACCTGCTCTGCGCC+AGG | - | chr4.1:10778366-10778385 | MS.gene47989:intron | 60.0% | |
AGGGGTAACCTTGGCGCAAC+TGG | - | chr4.1:10776505-10776524 | MS.gene47989:CDS | 60.0% | |
AGGGTTGCAGTGTACCCTGG+AGG | - | chr4.1:10774872-10774891 | MS.gene47989:intron | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | - | chr4.1:10776652-10776671 | MS.gene47989:intron | 60.0% | |
CGCCATCTCATCAGTTGGCC+TGG | + | chr4.1:10777140-10777159 | None:intergenic | 60.0% | |
CTGAAGCTCCCGCATACGCA+GGG | + | chr4.1:10776647-10776666 | None:intergenic | 60.0% | |
GATGCTCCACTTGGAGCTGG+GGG | - | chr4.1:10779274-10779293 | MS.gene47989:CDS | 60.0% | |
GCTCTCGCTCCACTACGACA+TGG | - | chr4.1:10777950-10777969 | MS.gene47989:intron | 60.0% | |
GGATCAACTGGAGCTGCGGA+GGG | - | chr4.1:10774853-10774872 | MS.gene47989:intron | 60.0% | |
GGCTGGGTACCCCACTTAGT+GGG | - | chr4.1:10778668-10778687 | MS.gene47989:intron | 60.0% | |
GGTCTCGGCAGATCGCAATC+CGG | + | chr4.1:10774957-10774976 | None:intergenic | 60.0% | |
GTCGCTGAGTGAACTCGACG+GGG | + | chr4.1:10774610-10774629 | None:intergenic | 60.0% | |
TCGCTGAGTGAACTCGACGG+GGG | + | chr4.1:10774609-10774628 | None:intergenic | 60.0% | |
TCGGCAGATCGCAATCCGGA+GGG | + | chr4.1:10774953-10774972 | None:intergenic | 60.0% | |
TGCTGGGCTGACTATTGCCC+GGG | - | chr4.1:10779198-10779217 | MS.gene47989:CDS | 60.0% | |
TGGATCAACTGGAGCTGCGG+AGG | - | chr4.1:10774852-10774871 | MS.gene47989:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr4.1:10776620-10776639 | MS.gene47989:intron | 60.0% |
! | TAAGTGGGGTACCCAGCCCA+TGG | + | chr4.1:10778666-10778685 | None:intergenic | 60.0% |
AGTGAACTCGACGGGGGAGG+TGG | + | chr4.1:10774603-10774622 | None:intergenic | 65.0% | |
CATACGCAGGGTCCGGGAAG+GGG | + | chr4.1:10776635-10776654 | None:intergenic | 65.0% | |
CGAGTTCCCCCAGCTCCAAG+TGG | + | chr4.1:10779283-10779302 | None:intergenic | 65.0% | |
CGGAGGGTTGCAGTGTACCC+TGG | - | chr4.1:10774869-10774888 | MS.gene47989:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr4.1:10776622-10776641 | None:intergenic | 65.0% | |
CTCGGCAGATCGCAATCCGG+AGG | + | chr4.1:10774954-10774973 | None:intergenic | 65.0% | |
CTGAAAGCCTGGCGCAGAGC+AGG | + | chr4.1:10778376-10778395 | None:intergenic | 65.0% | |
CTGAGTGAACTCGACGGGGG+AGG | + | chr4.1:10774606-10774625 | None:intergenic | 65.0% | |
CTTCCCGGACCCTGCGTATG+CGG | - | chr4.1:10776635-10776654 | MS.gene47989:intron | 65.0% | |
GCATACGCAGGGTCCGGGAA+GGG | + | chr4.1:10776636-10776655 | None:intergenic | 65.0% | |
GGGCTGGGTACCCCACTTAG+TGG | - | chr4.1:10778667-10778686 | MS.gene47989:intron | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | - | chr4.1:10776653-10776672 | MS.gene47989:intron | 65.0% | |
TTCCCGGACCCTGCGTATGC+GGG | - | chr4.1:10776636-10776655 | MS.gene47989:intron | 65.0% | |
!! | AGTACGAGGGTGCCACCAGC+TGG | + | chr4.1:10778469-10778488 | None:intergenic | 65.0% |
CGCATACGCAGGGTCCGGGA+AGG | + | chr4.1:10776637-10776656 | None:intergenic | 70.0% | |
CTCCCGCATACGCAGGGTCC+GGG | + | chr4.1:10776641-10776660 | None:intergenic | 70.0% | |
GAGTGCGCGGGTGGAGGAGA+GGG | + | chr4.1:10774558-10774577 | None:intergenic | 70.0% | |
GCGGGTGGAGGAGAGGGTGA+GGG | + | chr4.1:10774552-10774571 | None:intergenic | 70.0% | |
GCTCCCGCATACGCAGGGTC+CGG | + | chr4.1:10776642-10776661 | None:intergenic | 70.0% | |
GGAGGAGAGGGTGAGGGTGG+TGG | + | chr4.1:10774546-10774565 | None:intergenic | 70.0% | |
GGTGGAGGAGAGGGTGAGGG+TGG | + | chr4.1:10774549-10774568 | None:intergenic | 70.0% | |
! | AATGGCGGAGGCGAGTGCGC+GGG | + | chr4.1:10774570-10774589 | None:intergenic | 70.0% |
! | GAATGGCGGAGGCGAGTGCG+CGG | + | chr4.1:10774571-10774590 | None:intergenic | 70.0% |
CGAGTGCGCGGGTGGAGGAG+AGG | + | chr4.1:10774559-10774578 | None:intergenic | 75.0% | |
CGCGGGTGGAGGAGAGGGTG+AGG | + | chr4.1:10774553-10774572 | None:intergenic | 75.0% | |
! | GGAGGCGAGTGCGCGGGTGG+AGG | + | chr4.1:10774564-10774583 | None:intergenic | 80.0% |
! | GGCGGAGGCGAGTGCGCGGG+TGG | + | chr4.1:10774567-10774586 | None:intergenic | 85.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 10774410 | 10779348 | 10774410 | ID=MS.gene47989 |
chr4.1 | mRNA | 10774410 | 10779348 | 10774410 | ID=MS.gene47989.t1;Parent=MS.gene47989 |
chr4.1 | exon | 10779019 | 10779348 | 10779019 | ID=MS.gene47989.t1.exon1;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10779019 | 10779348 | 10779019 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10778764 | 10778937 | 10778764 | ID=MS.gene47989.t1.exon2;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10778764 | 10778937 | 10778764 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10777545 | 10777865 | 10777545 | ID=MS.gene47989.t1.exon3;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10777545 | 10777865 | 10777545 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10776905 | 10776970 | 10776905 | ID=MS.gene47989.t1.exon4;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10776905 | 10776970 | 10776905 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10776755 | 10776823 | 10776755 | ID=MS.gene47989.t1.exon5;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10776755 | 10776823 | 10776755 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10776445 | 10776537 | 10776445 | ID=MS.gene47989.t1.exon6;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10776445 | 10776537 | 10776445 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10775780 | 10776003 | 10775780 | ID=MS.gene47989.t1.exon7;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10775780 | 10776003 | 10775780 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10775236 | 10775509 | 10775236 | ID=MS.gene47989.t1.exon8;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10775236 | 10775509 | 10775236 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
chr4.1 | exon | 10774410 | 10774643 | 10774410 | ID=MS.gene47989.t1.exon9;Parent=MS.gene47989.t1 |
chr4.1 | CDS | 10774410 | 10774643 | 10774410 | ID=cds.MS.gene47989.t1;Parent=MS.gene47989.t1 |
Gene Sequence |
Protein sequence |