Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60712.t1 | XP_003592060.1 | 97.1 | 175 | 4 | 1 | 1 | 174 | 1 | 175 | 1.70E-68 | 268.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60712.t1 | Q9FEC1 | 67.8 | 174 | 54 | 2 | 1 | 174 | 1 | 172 | 3.3e-36 | 152.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60712.t1 | G7IBV7 | 97.1 | 175 | 4 | 1 | 1 | 174 | 1 | 175 | 1.2e-68 | 268.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene60712 | 0.811036 | 8.56E-51 | -1.69E-46 |
| MS.gene049171 | MS.gene60712 | 0.920047 | 2.10E-87 | -1.69E-46 |
| MS.gene049173 | MS.gene60712 | 0.804748 | 1.86E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene60712 | 0.834824 | 2.40E-56 | -1.69E-46 |
| MS.gene04921 | MS.gene60712 | -0.821032 | 5.01E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene60712 | 0.889678 | 1.95E-73 | -1.69E-46 |
| MS.gene049232 | MS.gene60712 | 0.866938 | 1.98E-65 | -1.69E-46 |
| MS.gene049285 | MS.gene60712 | 0.912644 | 1.54E-83 | -1.69E-46 |
| MS.gene049320 | MS.gene60712 | 0.921843 | 2.12E-88 | -1.69E-46 |
| MS.gene04939 | MS.gene60712 | 0.824648 | 7.20E-54 | -1.69E-46 |
| MS.gene049609 | MS.gene60712 | 0.855499 | 6.06E-62 | -1.69E-46 |
| MS.gene049627 | MS.gene60712 | 0.815234 | 1.03E-51 | -1.69E-46 |
| MS.gene049633 | MS.gene60712 | 0.883421 | 4.55E-71 | -1.69E-46 |
| MS.gene049805 | MS.gene60712 | 0.816931 | 4.29E-52 | -1.69E-46 |
| MS.gene049865 | MS.gene60712 | 0.817452 | 3.27E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene60712 | 0.896 | 5.61E-76 | -1.69E-46 |
| MS.gene050163 | MS.gene60712 | 0.895577 | 8.40E-76 | -1.69E-46 |
| MS.gene050165 | MS.gene60712 | 0.897318 | 1.58E-76 | -1.69E-46 |
| MS.gene050170 | MS.gene60712 | 0.923176 | 3.75E-89 | -1.69E-46 |
| MS.gene050322 | MS.gene60712 | -0.81211 | 5.00E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene60712 | 0.906882 | 9.22E-81 | -1.69E-46 |
| MS.gene050333 | MS.gene60712 | 0.852006 | 6.13E-61 | -1.69E-46 |
| MS.gene050338 | MS.gene60712 | -0.84774 | 9.55E-60 | -1.69E-46 |
| MS.gene050444 | MS.gene60712 | 0.837157 | 6.13E-57 | -1.69E-46 |
| MS.gene050496 | MS.gene60712 | 0.892444 | 1.58E-74 | -1.69E-46 |
| MS.gene050504 | MS.gene60712 | 0.935505 | 7.63E-97 | -1.69E-46 |
| MS.gene050518 | MS.gene60712 | 0.922226 | 1.29E-88 | -1.69E-46 |
| MS.gene050538 | MS.gene60712 | 0.830365 | 3.06E-55 | -1.69E-46 |
| MS.gene050577 | MS.gene60712 | 0.946202 | 7.23E-105 | -1.69E-46 |
| MS.gene050612 | MS.gene60712 | 0.929487 | 6.48E-93 | -1.69E-46 |
| MS.gene050647 | MS.gene60712 | -0.80264 | 5.10E-49 | -1.69E-46 |
| MS.gene050675 | MS.gene60712 | 0.888367 | 6.28E-73 | -1.69E-46 |
| MS.gene050697 | MS.gene60712 | 0.807862 | 4.11E-50 | -1.69E-46 |
| MS.gene050699 | MS.gene60712 | 0.915346 | 6.57E-85 | -1.69E-46 |
| MS.gene050747 | MS.gene60712 | 0.851319 | 9.59E-61 | -1.69E-46 |
| MS.gene050772 | MS.gene60712 | 0.871322 | 7.46E-67 | -1.69E-46 |
| MS.gene05080 | MS.gene60712 | 0.863984 | 1.68E-64 | -1.69E-46 |
| MS.gene05081 | MS.gene60712 | 0.814216 | 1.73E-51 | -1.69E-46 |
| MS.gene050868 | MS.gene60712 | 0.88936 | 2.60E-73 | -1.69E-46 |
| MS.gene050871 | MS.gene60712 | 0.889523 | 2.24E-73 | -1.69E-46 |
| MS.gene050876 | MS.gene60712 | 0.873579 | 1.32E-67 | -1.69E-46 |
| MS.gene050883 | MS.gene60712 | -0.814128 | 1.80E-51 | -1.69E-46 |
| MS.gene050904 | MS.gene60712 | 0.897881 | 9.14E-77 | -1.69E-46 |
| MS.gene050950 | MS.gene60712 | 0.852543 | 4.31E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene60712 | 0.920956 | 6.62E-88 | -1.69E-46 |
| MS.gene05100 | MS.gene60712 | 0.851934 | 6.42E-61 | -1.69E-46 |
| MS.gene051127 | MS.gene60712 | -0.818401 | 2.00E-52 | -1.69E-46 |
| MS.gene051138 | MS.gene60712 | -0.818137 | 2.29E-52 | -1.69E-46 |
| MS.gene051268 | MS.gene60712 | 0.842141 | 3.10E-58 | -1.69E-46 |
| MS.gene051317 | MS.gene60712 | 0.928792 | 1.75E-92 | -1.69E-46 |
| MS.gene051364 | MS.gene60712 | -0.807073 | 6.04E-50 | -1.69E-46 |
| MS.gene051439 | MS.gene60712 | -0.808012 | 3.82E-50 | -1.69E-46 |
| MS.gene051517 | MS.gene60712 | -0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene60712 | 0.885757 | 6.17E-72 | -1.69E-46 |
| MS.gene051651 | MS.gene60712 | -0.853403 | 2.45E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene60712 | 0.817074 | 3.98E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene60712 | 0.856314 | 3.50E-62 | -1.69E-46 |
| MS.gene051838 | MS.gene60712 | 0.841274 | 5.25E-58 | -1.69E-46 |
| MS.gene051949 | MS.gene60712 | 0.804944 | 1.69E-49 | -1.69E-46 |
| MS.gene052129 | MS.gene60712 | -0.8325 | 9.12E-56 | -1.69E-46 |
| MS.gene052164 | MS.gene60712 | 0.886848 | 2.39E-72 | -1.69E-46 |
| MS.gene052482 | MS.gene60712 | 0.894433 | 2.48E-75 | -1.69E-46 |
| MS.gene052486 | MS.gene60712 | 0.898511 | 4.94E-77 | -1.69E-46 |
| MS.gene052494 | MS.gene60712 | -0.832452 | 9.38E-56 | -1.69E-46 |
| MS.gene052501 | MS.gene60712 | 0.812055 | 5.14E-51 | -1.69E-46 |
| MS.gene052503 | MS.gene60712 | 0.890917 | 6.38E-74 | -1.69E-46 |
| MS.gene052504 | MS.gene60712 | 0.843029 | 1.80E-58 | -1.69E-46 |
| MS.gene052506 | MS.gene60712 | 0.86225 | 5.79E-64 | -1.69E-46 |
| MS.gene052606 | MS.gene60712 | -0.824321 | 8.60E-54 | -1.69E-46 |
| MS.gene052615 | MS.gene60712 | 0.846311 | 2.35E-59 | -1.69E-46 |
| MS.gene052820 | MS.gene60712 | 0.801449 | 8.96E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene60712 | 0.870993 | 9.59E-67 | -1.69E-46 |
| MS.gene052823 | MS.gene60712 | 0.891841 | 2.75E-74 | -1.69E-46 |
| MS.gene052825 | MS.gene60712 | 0.887549 | 1.29E-72 | -1.69E-46 |
| MS.gene052870 | MS.gene60712 | 0.80022 | 1.60E-48 | -1.69E-46 |
| MS.gene052872 | MS.gene60712 | 0.82786 | 1.24E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene60712 | 0.807183 | 5.72E-50 | -1.69E-46 |
| MS.gene052966 | MS.gene60712 | 0.85265 | 4.02E-61 | -1.69E-46 |
| MS.gene052986 | MS.gene60712 | 0.812956 | 3.26E-51 | -1.69E-46 |
| MS.gene052987 | MS.gene60712 | 0.814791 | 1.29E-51 | -1.69E-46 |
| MS.gene053117 | MS.gene60712 | 0.826502 | 2.62E-54 | -1.69E-46 |
| MS.gene053203 | MS.gene60712 | 0.890374 | 1.04E-73 | -1.69E-46 |
| MS.gene053207 | MS.gene60712 | 0.81075 | 9.87E-51 | -1.69E-46 |
| MS.gene053213 | MS.gene60712 | 0.878584 | 2.50E-69 | -1.69E-46 |
| MS.gene053284 | MS.gene60712 | 0.827277 | 1.71E-54 | -1.69E-46 |
| MS.gene053285 | MS.gene60712 | 0.804212 | 2.41E-49 | -1.69E-46 |
| MS.gene053286 | MS.gene60712 | 0.884441 | 1.91E-71 | -1.69E-46 |
| MS.gene053420 | MS.gene60712 | -0.819842 | 9.39E-53 | -1.69E-46 |
| MS.gene053421 | MS.gene60712 | -0.807336 | 5.31E-50 | -1.69E-46 |
| MS.gene053436 | MS.gene60712 | 0.845541 | 3.81E-59 | -1.69E-46 |
| MS.gene053479 | MS.gene60712 | 0.882189 | 1.28E-70 | -1.69E-46 |
| MS.gene053480 | MS.gene60712 | 0.881317 | 2.65E-70 | -1.69E-46 |
| MS.gene053574 | MS.gene60712 | 0.861387 | 1.06E-63 | -1.69E-46 |
| MS.gene053626 | MS.gene60712 | 0.840517 | 8.29E-58 | -1.69E-46 |
| MS.gene053632 | MS.gene60712 | 0.854708 | 1.03E-61 | -1.69E-46 |
| MS.gene053633 | MS.gene60712 | 0.807649 | 4.56E-50 | -1.69E-46 |
| MS.gene053824 | MS.gene60712 | 0.866503 | 2.72E-65 | -1.69E-46 |
| MS.gene053916 | MS.gene60712 | 0.842482 | 2.52E-58 | -1.69E-46 |
| MS.gene054003 | MS.gene60712 | 0.80674 | 7.10E-50 | -1.69E-46 |
| MS.gene054270 | MS.gene60712 | -0.814635 | 1.39E-51 | -1.69E-46 |
| MS.gene054344 | MS.gene60712 | 0.817349 | 3.45E-52 | -1.69E-46 |
| MS.gene054408 | MS.gene60712 | 0.847669 | 9.99E-60 | -1.69E-46 |
| MS.gene054595 | MS.gene60712 | 0.868297 | 7.25E-66 | -1.69E-46 |
| MS.gene054600 | MS.gene60712 | 0.86466 | 1.04E-64 | -1.69E-46 |
| MS.gene054642 | MS.gene60712 | 0.889847 | 1.68E-73 | -1.69E-46 |
| MS.gene054706 | MS.gene60712 | -0.836314 | 1.01E-56 | -1.69E-46 |
| MS.gene05470 | MS.gene60712 | 0.946804 | 2.29E-105 | -1.69E-46 |
| MS.gene054851 | MS.gene60712 | -0.815546 | 8.74E-52 | -1.69E-46 |
| MS.gene054884 | MS.gene60712 | -0.808643 | 2.80E-50 | -1.69E-46 |
| MS.gene054954 | MS.gene60712 | 0.929212 | 9.61E-93 | -1.69E-46 |
| MS.gene055154 | MS.gene60712 | -0.812148 | 4.90E-51 | -1.69E-46 |
| MS.gene055206 | MS.gene60712 | 0.822158 | 2.75E-53 | -1.69E-46 |
| MS.gene055224 | MS.gene60712 | 0.838049 | 3.62E-57 | -1.69E-46 |
| MS.gene055251 | MS.gene60712 | -0.849974 | 2.29E-60 | -1.69E-46 |
| MS.gene055362 | MS.gene60712 | 0.912178 | 2.62E-83 | -1.69E-46 |
| MS.gene055502 | MS.gene60712 | 0.907012 | 8.02E-81 | -1.69E-46 |
| MS.gene055577 | MS.gene60712 | 0.902965 | 5.65E-79 | -1.69E-46 |
| MS.gene055629 | MS.gene60712 | 0.827685 | 1.36E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene60712 | 0.803331 | 3.67E-49 | -1.69E-46 |
| MS.gene055729 | MS.gene60712 | -0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene055731 | MS.gene60712 | -0.810985 | 8.78E-51 | -1.69E-46 |
| MS.gene055748 | MS.gene60712 | 0.923449 | 2.62E-89 | -1.69E-46 |
| MS.gene055750 | MS.gene60712 | 0.908978 | 9.46E-82 | -1.69E-46 |
| MS.gene055751 | MS.gene60712 | 0.927491 | 1.09E-91 | -1.69E-46 |
| MS.gene055776 | MS.gene60712 | 0.892313 | 1.78E-74 | -1.69E-46 |
| MS.gene055849 | MS.gene60712 | 0.819643 | 1.04E-52 | -1.69E-46 |
| MS.gene05589 | MS.gene60712 | 0.926915 | 2.43E-91 | -1.69E-46 |
| MS.gene055941 | MS.gene60712 | 0.84587 | 3.10E-59 | -1.69E-46 |
| MS.gene056040 | MS.gene60712 | 0.823469 | 1.36E-53 | -1.69E-46 |
| MS.gene056046 | MS.gene60712 | 0.842248 | 2.90E-58 | -1.69E-46 |
| MS.gene056166 | MS.gene60712 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene056266 | MS.gene60712 | 0.845426 | 4.09E-59 | -1.69E-46 |
| MS.gene056283 | MS.gene60712 | 0.808484 | 3.03E-50 | -1.69E-46 |
| MS.gene056374 | MS.gene60712 | 0.849722 | 2.69E-60 | -1.69E-46 |
| MS.gene056387 | MS.gene60712 | 0.850465 | 1.67E-60 | -1.69E-46 |
| MS.gene056409 | MS.gene60712 | 0.802129 | 6.49E-49 | -1.69E-46 |
| MS.gene056446 | MS.gene60712 | 0.826896 | 2.11E-54 | -1.69E-46 |
| MS.gene056450 | MS.gene60712 | 0.821708 | 3.50E-53 | -1.69E-46 |
| MS.gene056504 | MS.gene60712 | 0.935595 | 6.62E-97 | -1.69E-46 |
| MS.gene056510 | MS.gene60712 | 0.902927 | 5.87E-79 | -1.69E-46 |
| MS.gene056550 | MS.gene60712 | -0.823851 | 1.11E-53 | -1.69E-46 |
| MS.gene056583 | MS.gene60712 | -0.809535 | 1.80E-50 | -1.69E-46 |
| MS.gene056590 | MS.gene60712 | -0.811244 | 7.72E-51 | -1.69E-46 |
| MS.gene056591 | MS.gene60712 | -0.812573 | 3.96E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene60712 | 0.835832 | 1.33E-56 | -1.69E-46 |
| MS.gene056618 | MS.gene60712 | -0.822726 | 2.03E-53 | -1.69E-46 |
| MS.gene056657 | MS.gene60712 | 0.906709 | 1.11E-80 | -1.69E-46 |
| MS.gene056692 | MS.gene60712 | 0.906276 | 1.76E-80 | -1.69E-46 |
| MS.gene056694 | MS.gene60712 | -0.8599 | 3.00E-63 | -1.69E-46 |
| MS.gene056697 | MS.gene60712 | -0.811932 | 5.47E-51 | -1.69E-46 |
| MS.gene056856 | MS.gene60712 | -0.821328 | 4.28E-53 | -1.69E-46 |
| MS.gene056898 | MS.gene60712 | 0.858781 | 6.51E-63 | -1.69E-46 |
| MS.gene057076 | MS.gene60712 | 0.82493 | 6.18E-54 | -1.69E-46 |
| MS.gene057086 | MS.gene60712 | 0.818137 | 2.29E-52 | -1.69E-46 |
| MS.gene057331 | MS.gene60712 | 0.810702 | 1.01E-50 | -1.69E-46 |
| MS.gene057332 | MS.gene60712 | 0.822123 | 2.80E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene60712 | 0.844252 | 8.48E-59 | -1.69E-46 |
| MS.gene05753 | MS.gene60712 | 0.833652 | 4.72E-56 | -1.69E-46 |
| MS.gene057658 | MS.gene60712 | 0.881192 | 2.94E-70 | -1.69E-46 |
| MS.gene057768 | MS.gene60712 | -0.818066 | 2.38E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene60712 | 0.891247 | 4.73E-74 | -1.69E-46 |
| MS.gene057857 | MS.gene60712 | 0.810914 | 9.10E-51 | -1.69E-46 |
| MS.gene057872 | MS.gene60712 | 0.803587 | 3.25E-49 | -1.69E-46 |
| MS.gene05787 | MS.gene60712 | 0.856069 | 4.13E-62 | -1.69E-46 |
| MS.gene057986 | MS.gene60712 | 0.809869 | 1.53E-50 | -1.69E-46 |
| MS.gene058111 | MS.gene60712 | -0.818728 | 1.68E-52 | -1.69E-46 |
| MS.gene058117 | MS.gene60712 | -0.806413 | 8.33E-50 | -1.69E-46 |
| MS.gene058130 | MS.gene60712 | 0.802171 | 6.37E-49 | -1.69E-46 |
| MS.gene058157 | MS.gene60712 | 0.818464 | 1.93E-52 | -1.69E-46 |
| MS.gene058175 | MS.gene60712 | -0.801346 | 9.40E-49 | -1.69E-46 |
| MS.gene058334 | MS.gene60712 | -0.890139 | 1.29E-73 | -1.69E-46 |
| MS.gene058335 | MS.gene60712 | 0.800325 | 1.52E-48 | -1.69E-46 |
| MS.gene058338 | MS.gene60712 | 0.83232 | 1.01E-55 | -1.69E-46 |
| MS.gene05837 | MS.gene60712 | 0.872578 | 2.85E-67 | -1.69E-46 |
| MS.gene058382 | MS.gene60712 | -0.825722 | 4.01E-54 | -1.69E-46 |
| MS.gene058419 | MS.gene60712 | 0.922781 | 6.29E-89 | -1.69E-46 |
| MS.gene058544 | MS.gene60712 | 0.899733 | 1.48E-77 | -1.69E-46 |
| MS.gene058719 | MS.gene60712 | 0.833369 | 5.55E-56 | -1.69E-46 |
| MS.gene058723 | MS.gene60712 | 0.834803 | 2.43E-56 | -1.69E-46 |
| MS.gene058773 | MS.gene60712 | 0.869428 | 3.12E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene60712 | 0.897479 | 1.35E-76 | -1.69E-46 |
| MS.gene059022 | MS.gene60712 | 0.911361 | 6.64E-83 | -1.69E-46 |
| MS.gene059023 | MS.gene60712 | 0.907431 | 5.11E-81 | -1.69E-46 |
| MS.gene059079 | MS.gene60712 | 0.806986 | 6.30E-50 | -1.69E-46 |
| MS.gene059103 | MS.gene60712 | -0.81952 | 1.11E-52 | -1.69E-46 |
| MS.gene05912 | MS.gene60712 | 0.823302 | 1.49E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene60712 | 0.817497 | 3.20E-52 | -1.69E-46 |
| MS.gene05914 | MS.gene60712 | 0.856279 | 3.58E-62 | -1.69E-46 |
| MS.gene05926 | MS.gene60712 | -0.803644 | 3.16E-49 | -1.69E-46 |
| MS.gene05934 | MS.gene60712 | 0.822513 | 2.28E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene60712 | 0.816769 | 4.66E-52 | -1.69E-46 |
| MS.gene059480 | MS.gene60712 | -0.816411 | 5.61E-52 | -1.69E-46 |
| MS.gene059526 | MS.gene60712 | -0.818406 | 1.99E-52 | -1.69E-46 |
| MS.gene059667 | MS.gene60712 | 0.862001 | 6.90E-64 | -1.69E-46 |
| MS.gene059677 | MS.gene60712 | 0.924921 | 3.69E-90 | -1.69E-46 |
| MS.gene059703 | MS.gene60712 | -0.809851 | 1.54E-50 | -1.69E-46 |
| MS.gene059718 | MS.gene60712 | 0.884903 | 1.29E-71 | -1.69E-46 |
| MS.gene059756 | MS.gene60712 | 0.884524 | 1.78E-71 | -1.69E-46 |
| MS.gene059770 | MS.gene60712 | -0.810311 | 1.23E-50 | -1.69E-46 |
| MS.gene059801 | MS.gene60712 | 0.841261 | 5.29E-58 | -1.69E-46 |
| MS.gene059837 | MS.gene60712 | 0.872698 | 2.60E-67 | -1.69E-46 |
| MS.gene059865 | MS.gene60712 | 0.927075 | 1.95E-91 | -1.69E-46 |
| MS.gene059953 | MS.gene60712 | -0.801719 | 7.89E-49 | -1.69E-46 |
| MS.gene059955 | MS.gene60712 | -0.800352 | 1.50E-48 | -1.69E-46 |
| MS.gene06000 | MS.gene60712 | 0.895277 | 1.12E-75 | -1.69E-46 |
| MS.gene06027 | MS.gene60712 | 0.832079 | 1.16E-55 | -1.69E-46 |
| MS.gene060595 | MS.gene60712 | -0.834628 | 2.69E-56 | -1.69E-46 |
| MS.gene060703 | MS.gene60712 | 0.888766 | 4.41E-73 | -1.69E-46 |
| MS.gene060762 | MS.gene60712 | 0.910679 | 1.43E-82 | -1.69E-46 |
| MS.gene060778 | MS.gene60712 | 0.88218 | 1.29E-70 | -1.69E-46 |
| MS.gene06077 | MS.gene60712 | 0.934632 | 2.99E-96 | -1.69E-46 |
| MS.gene060823 | MS.gene60712 | -0.837306 | 5.62E-57 | -1.69E-46 |
| MS.gene060835 | MS.gene60712 | 0.813408 | 2.60E-51 | -1.69E-46 |
| MS.gene06084 | MS.gene60712 | -0.832967 | 6.99E-56 | -1.69E-46 |
| MS.gene06092 | MS.gene60712 | 0.862993 | 3.42E-64 | -1.69E-46 |
| MS.gene06097 | MS.gene60712 | 0.801741 | 7.80E-49 | -1.69E-46 |
| MS.gene060982 | MS.gene60712 | 0.947745 | 3.69E-106 | -1.69E-46 |
| MS.gene061044 | MS.gene60712 | -0.880367 | 5.82E-70 | -1.69E-46 |
| MS.gene061150 | MS.gene60712 | 0.884359 | 2.05E-71 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60712.t1 | MTR_1g098280 | 97.714 | 175 | 3 | 1 | 1 | 174 | 1 | 175 | 4.58e-122 | 341 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene60712.t1 | AT1G34000 | 65.909 | 176 | 54 | 5 | 1 | 174 | 1 | 172 | 4.76e-55 | 172 |
Find 32 sgRNAs with CRISPR-Local
Find 126 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGATCCTTCTCTCGAATTT+TGG | 0.108201 | 1.2:-71094319 | MS.gene60712:CDS |
| CAGAAGCCAAGTTCTGTTAT+TGG | 0.242057 | 1.2:-71095987 | MS.gene60712:CDS |
| TCCATTGCTAATCTCATTCT+TGG | 0.259463 | 1.2:+71095842 | None:intergenic |
| AGCTTTATGCTGTTACTATA+AGG | 0.314703 | 1.2:-71096124 | MS.gene60712:CDS |
| TTCTTCAGATGGGCAATGTT+TGG | 0.321634 | 1.2:-71094400 | MS.gene60712:intron |
| AAAGGTTGAGGAAGATTAGA+TGG | 0.381685 | 1.2:+71096047 | None:intergenic |
| GGCTTCTGTGGTTGTGGAGG+AGG | 0.386924 | 1.2:+71096002 | None:intergenic |
| GAGGAAGATGAATGAGTTGT+TGG | 0.427102 | 1.2:+71096191 | None:intergenic |
| GTCTGAGCCCGTTGCAAACT+CGG | 0.430085 | 1.2:+71094357 | None:intergenic |
| GGTGAAGGTTTCAAAGGTTG+AGG | 0.438534 | 1.2:+71096035 | None:intergenic |
| TCATCTCCAATAACAGAACT+TGG | 0.445908 | 1.2:+71095981 | None:intergenic |
| AGGAAGATGAATGAGTTGTT+GGG | 0.449866 | 1.2:+71096192 | None:intergenic |
| GAACTTGGCTTCTGTGGTTG+TGG | 0.451217 | 1.2:+71095996 | None:intergenic |
| TTGCTAACCGAGTTTGCAAC+GGG | 0.454057 | 1.2:-71094364 | MS.gene60712:CDS |
| GGAGGCTGAGAAGGAGGTGA+AGG | 0.470690 | 1.2:+71096020 | None:intergenic |
| ATAAGGAATGTTCAGAATGA+TGG | 0.482112 | 1.2:-71096107 | MS.gene60712:CDS |
| AGATGAAGTTGAACATGAAG+AGG | 0.502915 | 1.2:+71096172 | None:intergenic |
| CTTGGCTTCTGTGGTTGTGG+AGG | 0.510538 | 1.2:+71095999 | None:intergenic |
| TATAGTAACAGCATAAAGCT+TGG | 0.513051 | 1.2:+71096127 | None:intergenic |
| CTTGAACAAGCAGCAGATCA+AGG | 0.524353 | 1.2:-71095885 | MS.gene60712:CDS |
| ATAACAGAACTTGGCTTCTG+TGG | 0.527549 | 1.2:+71095990 | None:intergenic |
| TGTGGAGGAGGCTGAGAAGG+AGG | 0.535122 | 1.2:+71096014 | None:intergenic |
| TTAGATGGTTCTTTCACAGA+AGG | 0.540411 | 1.2:+71096062 | None:intergenic |
| TCTTTCACAGAAGGAGCCGC+TGG | 0.542093 | 1.2:+71096071 | None:intergenic |
| GGTTGTGGAGGAGGCTGAGA+AGG | 0.543573 | 1.2:+71096011 | None:intergenic |
| GTTGCTAACCGAGTTTGCAA+CGG | 0.550254 | 1.2:-71094365 | MS.gene60712:CDS |
| CTATCCCAAAATTCGAGAGA+AGG | 0.568832 | 1.2:+71094314 | None:intergenic |
| GAAGGAGGTGAAGGTTTCAA+AGG | 0.586451 | 1.2:+71096029 | None:intergenic |
| GCCAAGAATGAGATTAGCAA+TGG | 0.587710 | 1.2:-71095843 | MS.gene60712:CDS |
| AGAATGAGATTAGCAATGGA+AGG | 0.602777 | 1.2:-71095839 | MS.gene60712:intron |
| GGAGCCGCTGGTCTTCTGAG+AGG | 0.691891 | 1.2:+71096083 | None:intergenic |
| TGGTCCTCTCAGAAGACCAG+CGG | 0.739227 | 1.2:-71096087 | MS.gene60712:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAAATTAATATTTAAGAA+AGG | + | chr1.2:71094769-71094788 | None:intergenic | 10.0% |
| !!! | AATTACAAATTATTTTCATT+TGG | - | chr1.2:71095551-71095570 | MS.gene60712:intron | 10.0% |
| !!! | ATTACAAATTATTTTCATTT+GGG | - | chr1.2:71095552-71095571 | MS.gene60712:intron | 10.0% |
| !!! | TTTAAAATGTAAAATCATTA+CGG | + | chr1.2:71096090-71096109 | None:intergenic | 10.0% |
| !!! | TTTATTTTATCATTTGTTAT+AGG | - | chr1.2:71094989-71095008 | MS.gene60712:intron | 10.0% |
| !! | AAGAATTAAAGCAATAAATT+TGG | + | chr1.2:71095215-71095234 | None:intergenic | 15.0% |
| !! | AGAATTAAAGCAATAAATTT+GGG | + | chr1.2:71095214-71095233 | None:intergenic | 15.0% |
| !!! | AATTCTTTCTATTTTTGAAT+TGG | - | chr1.2:71094725-71094744 | MS.gene60712:intron | 15.0% |
| !!! | ATTCTTTCTATTTTTGAATT+GGG | - | chr1.2:71094726-71094745 | MS.gene60712:intron | 15.0% |
| !! | TAATGATTAATGATAACCTT+TGG | - | chr1.2:71095252-71095271 | MS.gene60712:intron | 20.0% |
| !!! | TGTGCTTTTATATATGAATA+TGG | - | chr1.2:71096032-71096051 | MS.gene60712:CDS | 20.0% |
| !!! | TTCTTTCTATTTTTGAATTG+GGG | - | chr1.2:71094727-71094746 | MS.gene60712:intron | 20.0% |
| ! | AATTCAAATTACAGTGTGTT+GGG | + | chr1.2:71095528-71095547 | None:intergenic | 25.0% |
| ! | ATTGATCAGATTTACAATTC+TGG | + | chr1.2:71095712-71095731 | None:intergenic | 25.0% |
| ! | GTATTATCTCTTGTTCAAAA+TGG | - | chr1.2:71095799-71095818 | MS.gene60712:intron | 25.0% |
| ! | TAAAACATTCCAACTAATGT+AGG | - | chr1.2:71095393-71095412 | MS.gene60712:intron | 25.0% |
| ! | TAATTCAAATTACAGTGTGT+TGG | + | chr1.2:71095529-71095548 | None:intergenic | 25.0% |
| ! | TGATTGTGTTATCTTTATGT+TGG | - | chr1.2:71094796-71094815 | MS.gene60712:intron | 25.0% |
| !! | ACGAAACTTTTTGTCATTAA+GGG | + | chr1.2:71095349-71095368 | None:intergenic | 25.0% |
| !! | TAAAAGCACATTAGAAACAA+AGG | + | chr1.2:71096022-71096041 | None:intergenic | 25.0% |
| !! | TCATGATGTTATTGATTGAA+CGG | - | chr1.2:71095130-71095149 | MS.gene60712:intron | 25.0% |
| !!! | AAGAACTAGTTAGGTTTTTT+TGG | - | chr1.2:71094822-71094841 | MS.gene60712:intron | 25.0% |
| ACCAATTAATTACTGTTTGC+TGG | + | chr1.2:71095676-71095695 | None:intergenic | 30.0% | |
| ATAAGGAATGTTCAGAATGA+TGG | - | chr1.2:71094420-71094439 | MS.gene60712:intron | 30.0% | |
| ATCTGATCAATAAGTACATG+CGG | - | chr1.2:71095721-71095740 | MS.gene60712:intron | 30.0% | |
| ATTCAAATTACAGTGTGTTG+GGG | + | chr1.2:71095527-71095546 | None:intergenic | 30.0% | |
| TATAGTAACAGCATAAAGCT+TGG | + | chr1.2:71094403-71094422 | None:intergenic | 30.0% | |
| TCCAGCAAACAGTAATTAAT+TGG | - | chr1.2:71095672-71095691 | MS.gene60712:intron | 30.0% | |
| TTGGCAATGAATCCAAAAAA+GGG | + | chr1.2:71094669-71094688 | None:intergenic | 30.0% | |
| ! | AGCTTTATGCTGTTACTATA+AGG | - | chr1.2:71094403-71094422 | MS.gene60712:intron | 30.0% |
| ! | ATTCTTGTTTCTTCTTCAGA+TGG | - | chr1.2:71096116-71096135 | MS.gene60712:CDS | 30.0% |
| ! | CACGAAACTTTTTGTCATTA+AGG | + | chr1.2:71095350-71095369 | None:intergenic | 30.0% |
| ! | CGAAACTTTTTGTCATTAAG+GGG | + | chr1.2:71095348-71095367 | None:intergenic | 30.0% |
| ! | TTCTTGTTTCTTCTTCAGAT+GGG | - | chr1.2:71096117-71096136 | MS.gene60712:CDS | 30.0% |
| !! | AGTTAACTTGTTTGTCCAAT+TGG | - | chr1.2:71095064-71095083 | MS.gene60712:intron | 30.0% |
| !!! | GAATTTTGGGATAGTAGATT+TGG | - | chr1.2:71096222-71096241 | MS.gene60712:CDS | 30.0% |
| AAAGGTTGAGGAAGATTAGA+TGG | + | chr1.2:71094483-71094502 | None:intergenic | 35.0% | |
| AAATGGATACTAGAGTAACG+TGG | - | chr1.2:71095816-71095835 | MS.gene60712:intron | 35.0% | |
| AATAAGCGAAAAACAGCTCA+AGG | + | chr1.2:71094922-71094941 | None:intergenic | 35.0% | |
| AATGTAGGACTAGATTGTGT+TGG | - | chr1.2:71095408-71095427 | MS.gene60712:intron | 35.0% | |
| ACAAAAAGCTAAGGAATTGC+AGG | - | chr1.2:71094599-71094618 | MS.gene60712:intron | 35.0% | |
| AGAATGAGATTAGCAATGGA+AGG | - | chr1.2:71094688-71094707 | MS.gene60712:intron | 35.0% | |
| AGATGAAGTTGAACATGAAG+AGG | + | chr1.2:71094358-71094377 | None:intergenic | 35.0% | |
| AGGAAGATGAATGAGTTGTT+GGG | + | chr1.2:71094338-71094357 | None:intergenic | 35.0% | |
| CAATCTAGTCCTACATTAGT+TGG | + | chr1.2:71095405-71095424 | None:intergenic | 35.0% | |
| CTTGGCAATGAATCCAAAAA+AGG | + | chr1.2:71094670-71094689 | None:intergenic | 35.0% | |
| GAGACTCAAAACTAACTAAC+TGG | + | chr1.2:71095094-71095113 | None:intergenic | 35.0% | |
| GTTTCAGAGACAAAAAGCTA+AGG | - | chr1.2:71094590-71094609 | MS.gene60712:intron | 35.0% | |
| TAAAGTTGAACTGTTTCCCT+AGG | + | chr1.2:71094973-71094992 | None:intergenic | 35.0% | |
| TATGACAGTAGAAACCTTCA+AGG | - | chr1.2:71095623-71095642 | MS.gene60712:intron | 35.0% | |
| TCAACAAGATTGCTTCTGTA+TGG | + | chr1.2:71095579-71095598 | None:intergenic | 35.0% | |
| TCATCTCCAATAACAGAACT+TGG | + | chr1.2:71094549-71094568 | None:intergenic | 35.0% | |
| TCCATCACTATCAAAACTAC+AGG | + | chr1.2:71095278-71095297 | None:intergenic | 35.0% | |
| TCCATTGCTAATCTCATTCT+TGG | + | chr1.2:71094688-71094707 | None:intergenic | 35.0% | |
| TTAGATGGTTCTTTCACAGA+AGG | + | chr1.2:71094468-71094487 | None:intergenic | 35.0% | |
| TTGAAGGTTTCTACTGTCAT+AGG | + | chr1.2:71095624-71095643 | None:intergenic | 35.0% | |
| ! | AACTTTTTGTCATTAAGGGG+AGG | + | chr1.2:71095345-71095364 | None:intergenic | 35.0% |
| ! | AAGATCCTTCTCTCGAATTT+TGG | - | chr1.2:71096208-71096227 | MS.gene60712:CDS | 35.0% |
| ! | AGATCCTTCTCTCGAATTTT+GGG | - | chr1.2:71096209-71096228 | MS.gene60712:CDS | 35.0% |
| ! | CTTAAATTAGTCTGCCTTGA+AGG | + | chr1.2:71095640-71095659 | None:intergenic | 35.0% |
| ! | TAACTAACTGGTTCTCCAAT+TGG | + | chr1.2:71095082-71095101 | None:intergenic | 35.0% |
| ! | TAGTTCTACGTTGATTAGAG+AGG | - | chr1.2:71095449-71095468 | MS.gene60712:intron | 35.0% |
| ! | TGTTGGTAGAAGAACTAGTT+AGG | - | chr1.2:71094813-71094832 | MS.gene60712:intron | 35.0% |
| ! | TTTGGTAAAAGGTGCATTGA+GGG | + | chr1.2:71095932-71095951 | None:intergenic | 35.0% |
| !! | GAATTGGGGTTGATATAAGT+TGG | - | chr1.2:71094741-71094760 | MS.gene60712:intron | 35.0% |
| !! | TTGTTGGGATTTTGATGCAT+GGG | + | chr1.2:71094323-71094342 | None:intergenic | 35.0% |
| !!! | CAATGTTTGGTTTTGCTGTT+GGG | - | chr1.2:71096140-71096159 | MS.gene60712:CDS | 35.0% |
| !!! | TAGTTAGTTTTGAGTCTCTG+TGG | - | chr1.2:71095096-71095115 | MS.gene60712:intron | 35.0% |
| !!! | TCAAGTGATGTGGGATTTTT+TGG | + | chr1.2:71095863-71095882 | None:intergenic | 35.0% |
| !!! | TGTAGTTTTGATAGTGATGG+AGG | - | chr1.2:71095277-71095296 | MS.gene60712:intron | 35.0% |
| AATCTGTATCAGTTACGCTG+TGG | - | chr1.2:71095153-71095172 | MS.gene60712:intron | 40.0% | |
| ACTGTCATAGGAAAGCTCTA+AGG | + | chr1.2:71095612-71095631 | None:intergenic | 40.0% | |
| ATAACAGAACTTGGCTTCTG+TGG | + | chr1.2:71094540-71094559 | None:intergenic | 40.0% | |
| CAGAAGCCAAGTTCTGTTAT+TGG | - | chr1.2:71094540-71094559 | MS.gene60712:intron | 40.0% | |
| CGACTTTGTCCTTTGGTAAA+AGG | + | chr1.2:71095943-71095962 | None:intergenic | 40.0% | |
| CTATCAAAACTACAGGCCAA+AGG | + | chr1.2:71095271-71095290 | None:intergenic | 40.0% | |
| CTATCCCAAAATTCGAGAGA+AGG | + | chr1.2:71096216-71096235 | None:intergenic | 40.0% | |
| GAGGAAGATGAATGAGTTGT+TGG | + | chr1.2:71094339-71094358 | None:intergenic | 40.0% | |
| GATACTAGAGTAACGTGGAA+TGG | - | chr1.2:71095821-71095840 | MS.gene60712:intron | 40.0% | |
| GCCAAGAATGAGATTAGCAA+TGG | - | chr1.2:71094684-71094703 | MS.gene60712:intron | 40.0% | |
| GCTCAAAACCGACATTATCT+CGG | - | chr1.2:71095979-71095998 | MS.gene60712:CDS | 40.0% | |
| GGAGAGTTGGAAGTAACAAA+GGG | + | chr1.2:71095496-71095515 | None:intergenic | 40.0% | |
| TTCTTCAGATGGGCAATGTT+TGG | - | chr1.2:71096127-71096146 | MS.gene60712:CDS | 40.0% | |
| TTTGTCATTAAGGGGAGGAA+GGG | + | chr1.2:71095340-71095359 | None:intergenic | 40.0% | |
| ! | CTCAATGCACCTTTTACCAA+AGG | - | chr1.2:71095931-71095950 | MS.gene60712:CDS | 40.0% |
| ! | CTTTGGTAAAAGGTGCATTG+AGG | + | chr1.2:71095933-71095952 | None:intergenic | 40.0% |
| ! | TTTTGTCATTAAGGGGAGGA+AGG | + | chr1.2:71095341-71095360 | None:intergenic | 40.0% |
| !! | GTTGTTGGGATTTTGATGCA+TGG | + | chr1.2:71094324-71094343 | None:intergenic | 40.0% |
| !!! | AGTGATGTGGGATTTTTTGG+TGG | + | chr1.2:71095860-71095879 | None:intergenic | 40.0% |
| !!! | GCAATGTTTGGTTTTGCTGT+TGG | - | chr1.2:71096139-71096158 | MS.gene60712:CDS | 40.0% |
| !!! | GCCTGTAGTTTTGATAGTGA+TGG | - | chr1.2:71095274-71095293 | MS.gene60712:intron | 40.0% |
| !!! | TGTGGGATTTTTTGGTGGAT+CGG | + | chr1.2:71095855-71095874 | None:intergenic | 40.0% |
| CCGACATTATCTCGGAAAAG+CGG | - | chr1.2:71095987-71096006 | MS.gene60712:CDS | 45.0% | |
| CCTAGAGGCTAGAAAGCTTA+TGG | + | chr1.2:71094946-71094965 | None:intergenic | 45.0% | |
| CCTCGATTCTCAAGTGATGT+GGG | + | chr1.2:71095872-71095891 | None:intergenic | 45.0% | |
| CTTGAACAAGCAGCAGATCA+AGG | - | chr1.2:71094642-71094661 | MS.gene60712:intron | 45.0% | |
| GAAGGAGGTGAAGGTTTCAA+AGG | + | chr1.2:71094501-71094520 | None:intergenic | 45.0% | |
| GGAGCTAAATGTCAGAGTAC+TGG | - | chr1.2:71095470-71095489 | MS.gene60712:intron | 45.0% | |
| GGGAGAGTTGGAAGTAACAA+AGG | + | chr1.2:71095497-71095516 | None:intergenic | 45.0% | |
| GGTGAAGGTTTCAAAGGTTG+AGG | + | chr1.2:71094495-71094514 | None:intergenic | 45.0% | |
| GTTGCTAACCGAGTTTGCAA+CGG | - | chr1.2:71096162-71096181 | MS.gene60712:CDS | 45.0% | |
| GTTTCCCTAGGTTATCCTAG+AGG | + | chr1.2:71094961-71094980 | None:intergenic | 45.0% | |
| TTGCTAACCGAGTTTGCAAC+GGG | - | chr1.2:71096163-71096182 | MS.gene60712:CDS | 45.0% | |
| ! | CCATAAGCTTTCTAGCCTCT+AGG | - | chr1.2:71094943-71094962 | MS.gene60712:intron | 45.0% |
| !! | CCGCTTTTCCGAGATAATGT+CGG | + | chr1.2:71095990-71096009 | None:intergenic | 45.0% |
| !! | CTAGCCTCTAGGATAACCTA+GGG | - | chr1.2:71094954-71094973 | MS.gene60712:intron | 45.0% |
| !! | TCTAGCCTCTAGGATAACCT+AGG | - | chr1.2:71094953-71094972 | MS.gene60712:intron | 45.0% |
| !!! | GCAGATCAAGGTCCCTTTTT+TGG | - | chr1.2:71094654-71094673 | MS.gene60712:intron | 45.0% |
| CCCACATCACTTGAGAATCG+AGG | - | chr1.2:71095869-71095888 | MS.gene60712:CDS | 50.0% | |
| GAACTTGGCTTCTGTGGTTG+TGG | + | chr1.2:71094534-71094553 | None:intergenic | 50.0% | |
| GCACTCACGACTTTGTCCTT+TGG | + | chr1.2:71095950-71095969 | None:intergenic | 50.0% | |
| GCCTCGATTCTCAAGTGATG+TGG | + | chr1.2:71095873-71095892 | None:intergenic | 50.0% | |
| !! | AAGTCGTGAGTGCTGACACA+AGG | - | chr1.2:71095957-71095976 | MS.gene60712:CDS | 50.0% |
| ACAGTGTGTTGGGGAGTCTG+AGG | + | chr1.2:71095518-71095537 | None:intergenic | 55.0% | |
| CAGTGTGTTGGGGAGTCTGA+GGG | + | chr1.2:71095517-71095536 | None:intergenic | 55.0% | |
| CTTGGCTTCTGTGGTTGTGG+AGG | + | chr1.2:71094531-71094550 | None:intergenic | 55.0% | |
| GTCTGAGCCCGTTGCAAACT+CGG | + | chr1.2:71096173-71096192 | None:intergenic | 55.0% | |
| TCTTTCACAGAAGGAGCCGC+TGG | + | chr1.2:71094459-71094478 | None:intergenic | 55.0% | |
| TGGTCCTCTCAGAAGACCAG+CGG | - | chr1.2:71094440-71094459 | MS.gene60712:intron | 55.0% | |
| !! | GAGGAAGGGCGCTAAACTCT+CGG | + | chr1.2:71095326-71095345 | None:intergenic | 55.0% |
| GGAGGCTGAGAAGGAGGTGA+AGG | + | chr1.2:71094510-71094529 | None:intergenic | 60.0% | |
| GGCTTCTGTGGTTGTGGAGG+AGG | + | chr1.2:71094528-71094547 | None:intergenic | 60.0% | |
| GGTTGTGGAGGAGGCTGAGA+AGG | + | chr1.2:71094519-71094538 | None:intergenic | 60.0% | |
| TGGGGAGTCTGAGGGAGAGT+TGG | + | chr1.2:71095509-71095528 | None:intergenic | 60.0% | |
| TGTGGAGGAGGCTGAGAAGG+AGG | + | chr1.2:71094516-71094535 | None:intergenic | 60.0% | |
| !! | GGAGCCGCTGGTCTTCTGAG+AGG | + | chr1.2:71094447-71094466 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 71094300 | 71096249 | 71094300 | ID=MS.gene60712 |
| chr1.2 | mRNA | 71094300 | 71096249 | 71094300 | ID=MS.gene60712.t1;Parent=MS.gene60712 |
| chr1.2 | exon | 71095840 | 71096249 | 71095840 | ID=MS.gene60712.t1.exon1;Parent=MS.gene60712.t1 |
| chr1.2 | CDS | 71095840 | 71096249 | 71095840 | ID=cds.MS.gene60712.t1;Parent=MS.gene60712.t1 |
| chr1.2 | exon | 71094300 | 71094414 | 71094300 | ID=MS.gene60712.t1.exon2;Parent=MS.gene60712.t1 |
| chr1.2 | CDS | 71094300 | 71094414 | 71094300 | ID=cds.MS.gene60712.t1;Parent=MS.gene60712.t1 |
| Gene Sequence |
| Protein sequence |
