Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98750.t1 | XP_003598518.1 | 98.1 | 422 | 8 | 0 | 1 | 422 | 1 | 422 | 6.50E-239 | 836.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98750.t1 | G7J0K8 | 98.1 | 422 | 8 | 0 | 1 | 422 | 1 | 422 | 4.7e-239 | 836.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene98750 | 0.816943 | 4.26E-52 | -1.69E-46 |
| MS.gene049171 | MS.gene98750 | 0.887603 | 1.23E-72 | -1.69E-46 |
| MS.gene049217 | MS.gene98750 | 0.837123 | 6.26E-57 | -1.69E-46 |
| MS.gene049222 | MS.gene98750 | 0.886543 | 3.12E-72 | -1.69E-46 |
| MS.gene049232 | MS.gene98750 | 0.816317 | 5.89E-52 | -1.69E-46 |
| MS.gene049285 | MS.gene98750 | 0.878177 | 3.47E-69 | -1.69E-46 |
| MS.gene049320 | MS.gene98750 | 0.873956 | 9.84E-68 | -1.69E-46 |
| MS.gene04939 | MS.gene98750 | 0.835599 | 1.53E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene98750 | 0.834187 | 3.47E-56 | -1.69E-46 |
| MS.gene049627 | MS.gene98750 | 0.824948 | 6.12E-54 | -1.69E-46 |
| MS.gene049633 | MS.gene98750 | 0.866458 | 2.81E-65 | -1.69E-46 |
| MS.gene049805 | MS.gene98750 | 0.806773 | 6.99E-50 | -1.69E-46 |
| MS.gene049865 | MS.gene98750 | 0.815773 | 7.79E-52 | -1.69E-46 |
| MS.gene05010 | MS.gene98750 | 0.85143 | 8.92E-61 | -1.69E-46 |
| MS.gene050163 | MS.gene98750 | 0.873115 | 1.89E-67 | -1.69E-46 |
| MS.gene050165 | MS.gene98750 | 0.868786 | 5.04E-66 | -1.69E-46 |
| MS.gene050170 | MS.gene98750 | 0.847823 | 9.06E-60 | -1.69E-46 |
| MS.gene050323 | MS.gene98750 | 0.82697 | 2.03E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene98750 | 0.828908 | 6.92E-55 | -1.69E-46 |
| MS.gene050496 | MS.gene98750 | 0.816998 | 4.14E-52 | -1.69E-46 |
| MS.gene050504 | MS.gene98750 | 0.886209 | 4.17E-72 | -1.69E-46 |
| MS.gene050507 | MS.gene98750 | 0.805854 | 1.09E-49 | -1.69E-46 |
| MS.gene050518 | MS.gene98750 | 0.885474 | 7.88E-72 | -1.69E-46 |
| MS.gene050538 | MS.gene98750 | 0.811659 | 6.27E-51 | -1.69E-46 |
| MS.gene050577 | MS.gene98750 | 0.899939 | 1.21E-77 | -1.69E-46 |
| MS.gene050612 | MS.gene98750 | 0.881168 | 3.00E-70 | -1.69E-46 |
| MS.gene050675 | MS.gene98750 | 0.859214 | 4.83E-63 | -1.69E-46 |
| MS.gene050699 | MS.gene98750 | 0.89659 | 3.19E-76 | -1.69E-46 |
| MS.gene050747 | MS.gene98750 | 0.8719 | 4.80E-67 | -1.69E-46 |
| MS.gene050772 | MS.gene98750 | 0.840777 | 7.09E-58 | -1.69E-46 |
| MS.gene05080 | MS.gene98750 | 0.852369 | 4.83E-61 | -1.69E-46 |
| MS.gene050868 | MS.gene98750 | 0.841764 | 3.90E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene98750 | 0.838451 | 2.85E-57 | -1.69E-46 |
| MS.gene050876 | MS.gene98750 | 0.829837 | 4.12E-55 | -1.69E-46 |
| MS.gene050904 | MS.gene98750 | 0.86868 | 5.45E-66 | -1.69E-46 |
| MS.gene050950 | MS.gene98750 | 0.864368 | 1.28E-64 | -1.69E-46 |
| MS.gene050986 | MS.gene98750 | 0.884241 | 2.27E-71 | -1.69E-46 |
| MS.gene05100 | MS.gene98750 | 0.826352 | 2.84E-54 | -1.69E-46 |
| MS.gene051317 | MS.gene98750 | 0.881493 | 2.29E-70 | -1.69E-46 |
| MS.gene051551 | MS.gene98750 | 0.850004 | 2.25E-60 | -1.69E-46 |
| MS.gene051810 | MS.gene98750 | 0.820672 | 6.06E-53 | -1.69E-46 |
| MS.gene051838 | MS.gene98750 | 0.838618 | 2.58E-57 | -1.69E-46 |
| MS.gene052164 | MS.gene98750 | 0.870743 | 1.16E-66 | -1.69E-46 |
| MS.gene052482 | MS.gene98750 | 0.849111 | 3.99E-60 | -1.69E-46 |
| MS.gene052486 | MS.gene98750 | 0.863796 | 1.93E-64 | -1.69E-46 |
| MS.gene052501 | MS.gene98750 | 0.81889 | 1.55E-52 | -1.69E-46 |
| MS.gene052503 | MS.gene98750 | 0.879538 | 1.15E-69 | -1.69E-46 |
| MS.gene052506 | MS.gene98750 | 0.823792 | 1.14E-53 | -1.69E-46 |
| MS.gene052615 | MS.gene98750 | 0.837689 | 4.48E-57 | -1.69E-46 |
| MS.gene052822 | MS.gene98750 | 0.819156 | 1.35E-52 | -1.69E-46 |
| MS.gene052823 | MS.gene98750 | 0.869551 | 2.85E-66 | -1.69E-46 |
| MS.gene052825 | MS.gene98750 | 0.87281 | 2.39E-67 | -1.69E-46 |
| MS.gene052966 | MS.gene98750 | 0.846491 | 2.10E-59 | -1.69E-46 |
| MS.gene053117 | MS.gene98750 | 0.811094 | 8.31E-51 | -1.69E-46 |
| MS.gene053203 | MS.gene98750 | 0.873062 | 1.97E-67 | -1.69E-46 |
| MS.gene053207 | MS.gene98750 | 0.839554 | 1.48E-57 | -1.69E-46 |
| MS.gene053213 | MS.gene98750 | 0.859849 | 3.11E-63 | -1.69E-46 |
| MS.gene053286 | MS.gene98750 | 0.859255 | 4.69E-63 | -1.69E-46 |
| MS.gene053436 | MS.gene98750 | 0.830945 | 2.21E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene98750 | 0.817602 | 3.03E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene98750 | 0.87127 | 7.77E-67 | -1.69E-46 |
| MS.gene053574 | MS.gene98750 | 0.837832 | 4.12E-57 | -1.69E-46 |
| MS.gene053626 | MS.gene98750 | 0.822867 | 1.88E-53 | -1.69E-46 |
| MS.gene053632 | MS.gene98750 | 0.863548 | 2.30E-64 | -1.69E-46 |
| MS.gene053824 | MS.gene98750 | 0.851903 | 6.55E-61 | -1.69E-46 |
| MS.gene054408 | MS.gene98750 | 0.823416 | 1.40E-53 | -1.69E-46 |
| MS.gene054595 | MS.gene98750 | 0.860967 | 1.43E-63 | -1.69E-46 |
| MS.gene054600 | MS.gene98750 | 0.879195 | 1.52E-69 | -1.69E-46 |
| MS.gene054642 | MS.gene98750 | 0.850808 | 1.34E-60 | -1.69E-46 |
| MS.gene05470 | MS.gene98750 | 0.895438 | 9.58E-76 | -1.69E-46 |
| MS.gene054851 | MS.gene98750 | -0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene98750 | 0.844985 | 5.38E-59 | -1.69E-46 |
| MS.gene054954 | MS.gene98750 | 0.867234 | 1.59E-65 | -1.69E-46 |
| MS.gene055206 | MS.gene98750 | 0.821357 | 4.21E-53 | -1.69E-46 |
| MS.gene055362 | MS.gene98750 | 0.877617 | 5.44E-69 | -1.69E-46 |
| MS.gene055502 | MS.gene98750 | 0.883424 | 4.54E-71 | -1.69E-46 |
| MS.gene055577 | MS.gene98750 | 0.869217 | 3.65E-66 | -1.69E-46 |
| MS.gene055748 | MS.gene98750 | 0.885625 | 6.92E-72 | -1.69E-46 |
| MS.gene055750 | MS.gene98750 | 0.865225 | 6.89E-65 | -1.69E-46 |
| MS.gene055751 | MS.gene98750 | 0.878673 | 2.32E-69 | -1.69E-46 |
| MS.gene055776 | MS.gene98750 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene05589 | MS.gene98750 | 0.873315 | 1.62E-67 | -1.69E-46 |
| MS.gene055941 | MS.gene98750 | 0.835264 | 1.86E-56 | -1.69E-46 |
| MS.gene056040 | MS.gene98750 | 0.828856 | 7.12E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene98750 | 0.812447 | 4.22E-51 | -1.69E-46 |
| MS.gene056409 | MS.gene98750 | 0.845298 | 4.43E-59 | -1.69E-46 |
| MS.gene056449 | MS.gene98750 | 0.801416 | 9.10E-49 | -1.69E-46 |
| MS.gene056450 | MS.gene98750 | 0.818667 | 1.74E-52 | -1.69E-46 |
| MS.gene056504 | MS.gene98750 | 0.861788 | 8.02E-64 | -1.69E-46 |
| MS.gene056510 | MS.gene98750 | 0.877151 | 7.91E-69 | -1.69E-46 |
| MS.gene056610 | MS.gene98750 | 0.852787 | 3.67E-61 | -1.69E-46 |
| MS.gene056657 | MS.gene98750 | 0.869422 | 3.13E-66 | -1.69E-46 |
| MS.gene056692 | MS.gene98750 | 0.869593 | 2.76E-66 | -1.69E-46 |
| MS.gene056898 | MS.gene98750 | 0.806541 | 7.82E-50 | -1.69E-46 |
| MS.gene057076 | MS.gene98750 | 0.802153 | 6.42E-49 | -1.69E-46 |
| MS.gene057332 | MS.gene98750 | 0.813683 | 2.26E-51 | -1.69E-46 |
| MS.gene057416 | MS.gene98750 | 0.842634 | 2.29E-58 | -1.69E-46 |
| MS.gene057658 | MS.gene98750 | 0.86762 | 1.20E-65 | -1.69E-46 |
| MS.gene057831 | MS.gene98750 | 0.891547 | 3.60E-74 | -1.69E-46 |
| MS.gene05787 | MS.gene98750 | 0.83103 | 2.10E-55 | -1.69E-46 |
| MS.gene058334 | MS.gene98750 | -0.809388 | 1.94E-50 | -1.69E-46 |
| MS.gene058338 | MS.gene98750 | 0.825168 | 5.43E-54 | -1.69E-46 |
| MS.gene05837 | MS.gene98750 | 0.850475 | 1.66E-60 | -1.69E-46 |
| MS.gene058419 | MS.gene98750 | 0.877257 | 7.26E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene98750 | 0.874258 | 7.77E-68 | -1.69E-46 |
| MS.gene058719 | MS.gene98750 | 0.831882 | 1.30E-55 | -1.69E-46 |
| MS.gene058723 | MS.gene98750 | 0.804451 | 2.15E-49 | -1.69E-46 |
| MS.gene058773 | MS.gene98750 | 0.850754 | 1.38E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene98750 | 0.866317 | 3.11E-65 | -1.69E-46 |
| MS.gene059022 | MS.gene98750 | 0.87056 | 1.33E-66 | -1.69E-46 |
| MS.gene059023 | MS.gene98750 | 0.889715 | 1.89E-73 | -1.69E-46 |
| MS.gene059103 | MS.gene98750 | -0.80876 | 2.64E-50 | -1.69E-46 |
| MS.gene05914 | MS.gene98750 | 0.833438 | 5.33E-56 | -1.69E-46 |
| MS.gene05934 | MS.gene98750 | 0.817408 | 3.35E-52 | -1.69E-46 |
| MS.gene059480 | MS.gene98750 | -0.806297 | 8.81E-50 | -1.69E-46 |
| MS.gene059667 | MS.gene98750 | 0.826858 | 2.15E-54 | -1.69E-46 |
| MS.gene059677 | MS.gene98750 | 0.891033 | 5.75E-74 | -1.69E-46 |
| MS.gene059718 | MS.gene98750 | 0.880493 | 5.25E-70 | -1.69E-46 |
| MS.gene059756 | MS.gene98750 | 0.872161 | 3.93E-67 | -1.69E-46 |
| MS.gene059801 | MS.gene98750 | 0.824071 | 9.84E-54 | -1.69E-46 |
| MS.gene059837 | MS.gene98750 | 0.81336 | 2.66E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene98750 | 0.839905 | 1.20E-57 | -1.69E-46 |
| MS.gene06000 | MS.gene98750 | 0.838237 | 3.24E-57 | -1.69E-46 |
| MS.gene060703 | MS.gene98750 | 0.844112 | 9.25E-59 | -1.69E-46 |
| MS.gene060762 | MS.gene98750 | 0.867895 | 9.76E-66 | -1.69E-46 |
| MS.gene060778 | MS.gene98750 | 0.82162 | 3.66E-53 | -1.69E-46 |
| MS.gene06077 | MS.gene98750 | 0.894855 | 1.66E-75 | -1.69E-46 |
| MS.gene060835 | MS.gene98750 | 0.802485 | 5.49E-49 | -1.69E-46 |
| MS.gene06092 | MS.gene98750 | 0.86081 | 1.59E-63 | -1.69E-46 |
| MS.gene060982 | MS.gene98750 | 0.87951 | 1.17E-69 | -1.69E-46 |
| MS.gene061150 | MS.gene98750 | 0.8689 | 4.63E-66 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98750.t1 | MTR_3g014680 | 98.104 | 422 | 8 | 0 | 1 | 422 | 1 | 422 | 0.0 | 860 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 78 sgRNAs with CRISPR-Local
Find 353 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATGCTCTTGATGCTTC+TGG | 0.168943 | 3.4:+10870623 | MS.gene98750:CDS |
| CATTAACAGGCATGTTGATT+TGG | 0.242067 | 3.4:+10871794 | MS.gene98750:CDS |
| AAAATGAAGGAGGGCAAAAT+TGG | 0.270665 | 3.4:-10870523 | None:intergenic |
| GTTATAGTACCTTATGTTCC+TGG | 0.340475 | 3.4:-10875476 | None:intergenic |
| CTGTAATCTCTTAGCTCATT+TGG | 0.346789 | 3.4:-10875396 | None:intergenic |
| GACTCCATCCTTGCTCCAAC+TGG | 0.358917 | 3.4:-10875830 | None:intergenic |
| ATAATCTGAAGCATGCATTC+TGG | 0.376727 | 3.4:+10874960 | MS.gene98750:CDS |
| ATTAACAGGCATGTTGATTT+GGG | 0.389612 | 3.4:+10871795 | MS.gene98750:CDS |
| TATATAAGTGACAGCATTGC+AGG | 0.391828 | 3.4:-10874061 | None:intergenic |
| AAACCAGCATCTGCATTAAC+AGG | 0.395173 | 3.4:+10871781 | MS.gene98750:CDS |
| TTCAGCTTATGATAGCCTTT+CGG | 0.395354 | 3.4:-10874169 | None:intergenic |
| TGTAGAGAAGAAAGAGGTTG+TGG | 0.396330 | 3.4:-10870489 | None:intergenic |
| GATCATTTGTAACGAGGATA+AGG | 0.397028 | 3.4:-10875374 | None:intergenic |
| AAGAACCAGTGCAAATCTAT+TGG | 0.400814 | 3.4:+10873890 | MS.gene98750:CDS |
| ATAGACTGGATCGAGGAGTT+TGG | 0.412772 | 3.4:+10875195 | MS.gene98750:CDS |
| GTTTGGACCACTGTGCGCTT+TGG | 0.415095 | 3.4:+10875212 | MS.gene98750:CDS |
| TTCTTCCATGTCACTTTCAG+AGG | 0.432243 | 3.4:-10875766 | None:intergenic |
| TGAGAATGTAGAGAAGAAAG+AGG | 0.433662 | 3.4:-10870495 | None:intergenic |
| GACATGAGGCGTTCATTGTC+TGG | 0.437990 | 3.4:+10875236 | MS.gene98750:CDS |
| TTTGTATGATCATGATGAAA+AGG | 0.438635 | 3.4:-10874983 | None:intergenic |
| CTGATGTCATTATGTGTGCT+TGG | 0.441375 | 3.4:-10874207 | None:intergenic |
| TATGTTCCTGGTACTTCGTC+AGG | 0.446688 | 3.4:-10875464 | None:intergenic |
| TCCGTTGCTAGAAAGTTTCT+CGG | 0.450146 | 3.4:+10875858 | MS.gene98750:CDS |
| TTGTGAACAGAATCCTTCCC+TGG | 0.460736 | 3.4:-10871730 | None:intergenic |
| AGCTGCAGAAGATGATTCTC+TGG | 0.462249 | 3.4:+10871836 | MS.gene98750:CDS |
| CGTATAATCCACAATGATAG+AGG | 0.464560 | 3.4:-10875425 | None:intergenic |
| AATGACATCAGGGAATCTAT+TGG | 0.474691 | 3.4:+10874219 | MS.gene98750:CDS |
| TGGCTCCAATAGATTTGCAC+TGG | 0.477372 | 3.4:-10873895 | None:intergenic |
| CAAGCACACATAATGACATC+AGG | 0.478012 | 3.4:+10874208 | MS.gene98750:CDS |
| TTATGAATGAGCAGGAAGCC+AGG | 0.491755 | 3.4:+10871712 | MS.gene98750:intron |
| TTTCAGCATCAAAATACAAA+AGG | 0.495452 | 3.4:-10874117 | None:intergenic |
| AAGATTAGATGATCTTTCAA+TGG | 0.495549 | 3.4:+10871902 | MS.gene98750:CDS |
| GTAGAGAAGAAAGAGGTTGT+GGG | 0.496524 | 3.4:-10870488 | None:intergenic |
| GACGAAGTACCAGGAACATA+AGG | 0.500289 | 3.4:+10875467 | MS.gene98750:CDS |
| TCCCCTCGTGTGATATGTCA+TGG | 0.514884 | 3.4:+10870554 | MS.gene98750:CDS |
| TCATCCAGTTGGAGCAAGGA+TGG | 0.519551 | 3.4:+10875826 | MS.gene98750:CDS |
| ATCAGGGAATCTATTGGTTG+AGG | 0.531383 | 3.4:+10874225 | MS.gene98750:CDS |
| TTCTCTGGTATCACATTCGT+CGG | 0.535980 | 3.4:+10871851 | MS.gene98750:CDS |
| CTCTGAAATTGCATCAGCTA+AGG | 0.537834 | 3.4:+10875163 | MS.gene98750:CDS |
| ACAATACCTGACGAAGTACC+AGG | 0.539219 | 3.4:+10875458 | MS.gene98750:CDS |
| TAAGGCTGCTCAACATAGAC+TGG | 0.539706 | 3.4:+10875181 | MS.gene98750:CDS |
| AGCATTCTCCTCTATCATTG+TGG | 0.542918 | 3.4:+10875417 | MS.gene98750:CDS |
| TCGGGCGATGAATCATATGA+AGG | 0.547656 | 3.4:-10871945 | None:intergenic |
| ACGAAAGCATCGACAGGAAG+CGG | 0.547986 | 3.4:-10871876 | None:intergenic |
| GGGGATGAATAAGAAAATGA+AGG | 0.553136 | 3.4:-10870536 | None:intergenic |
| CGGGCGATGAATCATATGAA+GGG | 0.568024 | 3.4:-10871944 | None:intergenic |
| AGTTGCCGCGTGTTGAACGT+TGG | 0.568265 | 3.4:-10870582 | None:intergenic |
| ATGCCTGTTAATGCAGATGC+TGG | 0.570082 | 3.4:-10871784 | None:intergenic |
| GCGATTGAATCTCATCCAGT+TGG | 0.578998 | 3.4:+10875815 | MS.gene98750:CDS |
| ACCGAGAAACTTTCTAGCAA+CGG | 0.581639 | 3.4:-10875859 | None:intergenic |
| CATTTGGATCATTTGTAACG+AGG | 0.590534 | 3.4:-10875380 | None:intergenic |
| TCGGTAATAACTCTGATCCA+TGG | 0.595558 | 3.4:+10875877 | MS.gene98750:CDS |
| CTTGCAACGAAAGCATCGAC+AGG | 0.597246 | 3.4:-10871882 | None:intergenic |
| ATGAATAAGAAAATGAAGGA+GGG | 0.597273 | 3.4:-10870532 | None:intergenic |
| GATGAATAAGAAAATGAAGG+AGG | 0.601768 | 3.4:-10870533 | None:intergenic |
| AATCTCATCCAGTTGGAGCA+AGG | 0.604560 | 3.4:+10875822 | MS.gene98750:CDS |
| TATGAATGAGCAGGAAGCCA+GGG | 0.605007 | 3.4:+10871713 | MS.gene98750:intron |
| CTATCATAAGCTGAAAAGCA+AGG | 0.606589 | 3.4:+10874177 | MS.gene98750:CDS |
| GAGTGAAGATAGAGTGCTTG+TGG | 0.606600 | 3.4:-10873915 | None:intergenic |
| TCGCGTTATTAGTTTATCGA+CGG | 0.614613 | 3.4:-10875796 | None:intergenic |
| ATCAACCTCTGAAAGTGACA+TGG | 0.621039 | 3.4:+10875761 | MS.gene98750:CDS |
| GGGCGATGAATCATATGAAG+GGG | 0.623869 | 3.4:-10871943 | None:intergenic |
| AATGAGCAGGAAGCCAGGGA+AGG | 0.640830 | 3.4:+10871717 | MS.gene98750:intron |
| CTGTGCGCTTTGGCGACATG+AGG | 0.642640 | 3.4:+10875222 | MS.gene98750:CDS |
| CATCATGCAAGAAGAACTTG+AGG | 0.646582 | 3.4:-10870607 | None:intergenic |
| TCATATGAAGGGGTGTAGTG+AGG | 0.651341 | 3.4:-10871933 | None:intergenic |
| AGAAACTTTCTAGCAACGGA+CGG | 0.659920 | 3.4:-10875855 | None:intergenic |
| CTATCATTGTGGATTATACG+AGG | 0.661047 | 3.4:+10875428 | MS.gene98750:CDS |
| CCTCCATGACATATCACACG+AGG | 0.661063 | 3.4:-10870557 | None:intergenic |
| ACAAGCACTCTATCTTCACT+CGG | 0.662211 | 3.4:+10873917 | MS.gene98750:CDS |
| AGGCTCCAACGTTCAACACG+CGG | 0.663386 | 3.4:+10870577 | MS.gene98750:CDS |
| AAACAAAAGAGGAACTACCA+TGG | 0.668179 | 3.4:-10875894 | None:intergenic |
| AAGCACACATAATGACATCA+GGG | 0.674877 | 3.4:+10874209 | MS.gene98750:CDS |
| CTCCATGACATATCACACGA+GGG | 0.687060 | 3.4:-10870556 | None:intergenic |
| TCCATGACATATCACACGAG+GGG | 0.694967 | 3.4:-10870555 | None:intergenic |
| CATGTCGCCAAAGCGCACAG+TGG | 0.713769 | 3.4:-10875219 | None:intergenic |
| CCTCGTGTGATATGTCATGG+AGG | 0.732138 | 3.4:+10870557 | MS.gene98750:CDS |
| GCTCAACATAGACTGGATCG+AGG | 0.743918 | 3.4:+10875188 | MS.gene98750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAGTTATAACAAAAAA+TGG | - | chr3.4:10871534-10871553 | None:intergenic | 10.0% |
| !! | CATTAAAATAAATAGAAAAT+AGG | - | chr3.4:10875095-10875114 | None:intergenic | 10.0% |
| !! | TATATATAATGTATTTAAGA+TGG | + | chr3.4:10871412-10871431 | MS.gene98750:intron | 10.0% |
| !! | TTCAAAAAGAAATTAAATAT+GGG | - | chr3.4:10873955-10873974 | None:intergenic | 10.0% |
| !! | TTTCAAAAAGAAATTAAATA+TGG | - | chr3.4:10873956-10873975 | None:intergenic | 10.0% |
| !!! | AATCACATTTTAATTATTAT+CGG | - | chr3.4:10872561-10872580 | None:intergenic | 10.0% |
| !!! | ATTGTTTTATTTGTTTAATT+TGG | + | chr3.4:10870723-10870742 | MS.gene98750:intron | 10.0% |
| !! | TCAAAAAGAAATTAAATATG+GGG | - | chr3.4:10873954-10873973 | None:intergenic | 15.0% |
| !!! | AGATTTGATTTATTGAAAAA+GGG | + | chr3.4:10871379-10871398 | MS.gene98750:intron | 15.0% |
| !!! | ATACAAAAACCTTATTTTTA+AGG | + | chr3.4:10874999-10875018 | MS.gene98750:CDS | 15.0% |
| !!! | TACAAAAACCTTATTTTTAA+GGG | + | chr3.4:10875000-10875019 | MS.gene98750:CDS | 15.0% |
| !!! | TCAAATTTTAAGATTGTTTT+TGG | + | chr3.4:10870692-10870711 | MS.gene98750:intron | 15.0% |
| !!! | TTTTATTTGTTTAATTTGGA+TGG | + | chr3.4:10870727-10870746 | MS.gene98750:intron | 15.0% |
| !! | AAATGAATTCAAATCTTTGT+AGG | - | chr3.4:10870982-10871001 | None:intergenic | 20.0% |
| !! | AAGAAAATTGAAGTGATTAA+AGG | + | chr3.4:10871184-10871203 | MS.gene98750:intron | 20.0% |
| !! | ACTTATTATTACAAGTAATG+CGG | + | chr3.4:10873513-10873532 | MS.gene98750:intron | 20.0% |
| !! | AGAAAAAATAGATTGAATTG+TGG | + | chr3.4:10873161-10873180 | MS.gene98750:intron | 20.0% |
| !! | AGAATTTATATGATTTGAAG+AGG | - | chr3.4:10872885-10872904 | None:intergenic | 20.0% |
| !! | ATATCATCTTAAATTTAGGT+TGG | - | chr3.4:10872135-10872154 | None:intergenic | 20.0% |
| !! | ATTGACCTTGTTAAAATAAT+AGG | + | chr3.4:10873118-10873137 | MS.gene98750:intron | 20.0% |
| !! | GAACATTAAAAATATCATGA+GGG | - | chr3.4:10874150-10874169 | None:intergenic | 20.0% |
| !! | TCTGATATCATCTTAAATTT+AGG | - | chr3.4:10872139-10872158 | None:intergenic | 20.0% |
| !! | TCTTCTAATTAATAAAGTCT+TGG | + | chr3.4:10873605-10873624 | MS.gene98750:intron | 20.0% |
| !! | TTATAACAAAAAATGGAATG+AGG | - | chr3.4:10871527-10871546 | None:intergenic | 20.0% |
| !! | TTATCCTAATTAATAAACCA+AGG | - | chr3.4:10874732-10874751 | None:intergenic | 20.0% |
| !! | TTGACCTTGTTAAAATAATA+GGG | + | chr3.4:10873119-10873138 | MS.gene98750:intron | 20.0% |
| !!! | AAAACCCTATTATTTTAACA+AGG | - | chr3.4:10873126-10873145 | None:intergenic | 20.0% |
| !!! | AAGATTATAGGTAGATATTT+TGG | + | chr3.4:10872730-10872749 | MS.gene98750:intron | 20.0% |
| !!! | ACATACCAAAATAAAGTTTT+GGG | - | chr3.4:10873480-10873499 | None:intergenic | 20.0% |
| !!! | ACTGAATAATCTTAATTTGT+TGG | + | chr3.4:10871680-10871699 | MS.gene98750:intron | 20.0% |
| !!! | ATTTTGGTATGTAGTTAATT+AGG | + | chr3.4:10873488-10873507 | MS.gene98750:intron | 20.0% |
| !!! | CAATTTTGTATGATTAAGAT+TGG | + | chr3.4:10872108-10872127 | MS.gene98750:intron | 20.0% |
| !!! | CTGAATAATCTTAATTTGTT+GGG | + | chr3.4:10871681-10871700 | MS.gene98750:intron | 20.0% |
| !!! | GAGATTTGATTTATTGAAAA+AGG | + | chr3.4:10871378-10871397 | MS.gene98750:intron | 20.0% |
| !!! | GTGTATATTTTTTCTAGTTT+TGG | + | chr3.4:10874318-10874337 | MS.gene98750:intron | 20.0% |
| !!! | TACATACCAAAATAAAGTTT+TGG | - | chr3.4:10873481-10873500 | None:intergenic | 20.0% |
| !!! | TATCATCTTAAATTTAGGTT+GGG | - | chr3.4:10872134-10872153 | None:intergenic | 20.0% |
| !!! | TGATATATTTTTTCCAGATT+TGG | + | chr3.4:10875519-10875538 | MS.gene98750:intron | 20.0% |
| !!! | TTAACAATTAGGTTCATTTT+AGG | + | chr3.4:10872367-10872386 | MS.gene98750:intron | 20.0% |
| !!! | TTTTCAAATCTTGATATTGA+GGG | + | chr3.4:10871556-10871575 | MS.gene98750:intron | 20.0% |
| ! | AAATATCAGAAGTTTGACAA+TGG | - | chr3.4:10875309-10875328 | None:intergenic | 25.0% |
| ! | AAATTATTGTGAGTTCTATG+TGG | - | chr3.4:10874667-10874686 | None:intergenic | 25.0% |
| ! | AACTTGACATTATGAACATT+AGG | - | chr3.4:10873287-10873306 | None:intergenic | 25.0% |
| ! | AAGATTAGATGATCTTTCAA+TGG | + | chr3.4:10871902-10871921 | MS.gene98750:CDS | 25.0% |
| ! | AAGGAAAACTAAAACAGATA+TGG | - | chr3.4:10874904-10874923 | None:intergenic | 25.0% |
| ! | AATTCATGTTAAATGAAGCT+TGG | + | chr3.4:10870758-10870777 | MS.gene98750:intron | 25.0% |
| ! | ATATCATTCATGCATTGTAT+AGG | - | chr3.4:10875505-10875524 | None:intergenic | 25.0% |
| ! | ATGAATAAGAAAATGAAGGA+GGG | - | chr3.4:10870535-10870554 | None:intergenic | 25.0% |
| ! | ATTCAGTTTATTTGGAAAGA+AGG | - | chr3.4:10875689-10875708 | None:intergenic | 25.0% |
| ! | CCAAAATAAACTCATTTCAA+GGG | - | chr3.4:10872065-10872084 | None:intergenic | 25.0% |
| ! | GAATATATTATCAAACTCAG+AGG | - | chr3.4:10874879-10874898 | None:intergenic | 25.0% |
| ! | GAATTCACATTAAACAATCT+TGG | - | chr3.4:10875592-10875611 | None:intergenic | 25.0% |
| ! | GGAACATTAAAAATATCATG+AGG | - | chr3.4:10874151-10874170 | None:intergenic | 25.0% |
| ! | TACCTATAATCTTATCAACT+TGG | - | chr3.4:10872723-10872742 | None:intergenic | 25.0% |
| ! | TCTAAAAATGCTTCGTTTAT+GGG | + | chr3.4:10874093-10874112 | MS.gene98750:CDS | 25.0% |
| ! | TTATATGAGAATATTCCAAG+AGG | + | chr3.4:10874836-10874855 | MS.gene98750:intron | 25.0% |
| ! | TTCAGTTTATTTGGAAAGAA+GGG | - | chr3.4:10875688-10875707 | None:intergenic | 25.0% |
| ! | TTGAGTGACTCTTAAAATTT+GGG | + | chr3.4:10874398-10874417 | MS.gene98750:intron | 25.0% |
| ! | TTTACTTTAATGAATTGAGC+AGG | + | chr3.4:10874015-10874034 | MS.gene98750:intron | 25.0% |
| ! | TTTCAGCATCAAAATACAAA+AGG | - | chr3.4:10874120-10874139 | None:intergenic | 25.0% |
| ! | TTTGTATGATCATGATGAAA+AGG | - | chr3.4:10874986-10875005 | None:intergenic | 25.0% |
| !! | AAACCAAATGACAATTTTAG+AGG | - | chr3.4:10871642-10871661 | None:intergenic | 25.0% |
| !! | AAGATTTTTGTATGTTCACA+AGG | + | chr3.4:10871989-10872008 | MS.gene98750:CDS | 25.0% |
| !! | CTTTTCAAATCTTGATATTG+AGG | + | chr3.4:10871555-10871574 | MS.gene98750:intron | 25.0% |
| !! | TTCTAAAAATGCTTCGTTTA+TGG | + | chr3.4:10874092-10874111 | MS.gene98750:CDS | 25.0% |
| !!! | AAACCTCTAAAATTGTCATT+TGG | + | chr3.4:10871636-10871655 | MS.gene98750:intron | 25.0% |
| !!! | AAATAATAGGGTTTTAGATG+AGG | + | chr3.4:10873131-10873150 | MS.gene98750:intron | 25.0% |
| !!! | AAGAATTTTTAGTCCAAACA+AGG | - | chr3.4:10871451-10871470 | None:intergenic | 25.0% |
| !!! | AATAATCTTAATTTGTTGGG+TGG | + | chr3.4:10871684-10871703 | MS.gene98750:intron | 25.0% |
| !!! | CCTTGAAATGAGTTTATTTT+GGG | + | chr3.4:10872063-10872082 | MS.gene98750:intron | 25.0% |
| !!! | GATATTTTTAATGTTCCGAA+AGG | + | chr3.4:10874154-10874173 | MS.gene98750:CDS | 25.0% |
| !!! | TCATACAAAATTGACTTGTA+AGG | - | chr3.4:10872101-10872120 | None:intergenic | 25.0% |
| AAAACCGATTGGTAAGATAA+GGG | + | chr3.4:10874589-10874608 | MS.gene98750:intron | 30.0% | |
| AAAAGGGAAAAGGAAAATGA+AGG | + | chr3.4:10872809-10872828 | MS.gene98750:intron | 30.0% | |
| AAACAAAAATCCACCATTAC+AGG | - | chr3.4:10870804-10870823 | None:intergenic | 30.0% | |
| AACTCTCATAATGCCAAAAA+GGG | + | chr3.4:10872793-10872812 | MS.gene98750:intron | 30.0% | |
| AAGTGATTAAAGGTAGCTAT+AGG | + | chr3.4:10871194-10871213 | MS.gene98750:intron | 30.0% | |
| AATACCATTCTTATCACTTC+AGG | + | chr3.4:10873031-10873050 | MS.gene98750:intron | 30.0% | |
| ACTCAAATGCCTTAGAATTT+GGG | - | chr3.4:10872284-10872303 | None:intergenic | 30.0% | |
| ACTTGAGATTAAGGTGTATT+TGG | - | chr3.4:10871346-10871365 | None:intergenic | 30.0% | |
| AGAACTCACAATAATTTACG+TGG | + | chr3.4:10874670-10874689 | MS.gene98750:intron | 30.0% | |
| AGTGCATATTGAATGAGATA+TGG | + | chr3.4:10872254-10872273 | MS.gene98750:intron | 30.0% | |
| ATAACTCAATCCTACAAAAC+CGG | + | chr3.4:10874426-10874445 | MS.gene98750:intron | 30.0% | |
| CACATCACATTCAGTTTATT+TGG | - | chr3.4:10875697-10875716 | None:intergenic | 30.0% | |
| CAGTTAGAAATAGCTCATAA+CGG | + | chr3.4:10873437-10873456 | MS.gene98750:intron | 30.0% | |
| CATAATATATGTCAGGTCTA+GGG | - | chr3.4:10871282-10871301 | None:intergenic | 30.0% | |
| CCCAAAATAAACTCATTTCA+AGG | - | chr3.4:10872066-10872085 | None:intergenic | 30.0% | |
| CTAAAAATGCTTCGTTTATG+GGG | + | chr3.4:10874094-10874113 | MS.gene98750:CDS | 30.0% | |
| CTTGTCTTAAAGTTTGTCAA+CGG | + | chr3.4:10875134-10875153 | MS.gene98750:intron | 30.0% | |
| GATGAATAAGAAAATGAAGG+AGG | - | chr3.4:10870536-10870555 | None:intergenic | 30.0% | |
| GATTAACTATTTCAAACCTC+TGG | + | chr3.4:10873850-10873869 | MS.gene98750:intron | 30.0% | |
| GCATTGAAGATCACAATAAA+AGG | - | chr3.4:10872701-10872720 | None:intergenic | 30.0% | |
| GGATACAGATGTTAACAATT+AGG | + | chr3.4:10872356-10872375 | MS.gene98750:intron | 30.0% | |
| GTCTTGCCATCTTAAAAATT+GGG | + | chr3.4:10874545-10874564 | MS.gene98750:intron | 30.0% | |
| GTGTCTGTATTAACTACAAA+AGG | + | chr3.4:10872307-10872326 | MS.gene98750:intron | 30.0% | |
| GTTGAGTGACTCTTAAAATT+TGG | + | chr3.4:10874397-10874416 | MS.gene98750:intron | 30.0% | |
| TAAACAATCTTGGTTGTTGA+TGG | - | chr3.4:10875582-10875601 | None:intergenic | 30.0% | |
| TACTCAAATGCCTTAGAATT+TGG | - | chr3.4:10872285-10872304 | None:intergenic | 30.0% | |
| TAGAATTTGTCATCCTGTAA+TGG | + | chr3.4:10870788-10870807 | MS.gene98750:intron | 30.0% | |
| TATGAGAGTTCTGTAAATAG+AGG | - | chr3.4:10872783-10872802 | None:intergenic | 30.0% | |
| TCACAATAATTTACGTGGTT+CGG | + | chr3.4:10874675-10874694 | MS.gene98750:intron | 30.0% | |
| TGATAACATTGTTATCCTCT+TGG | - | chr3.4:10874854-10874873 | None:intergenic | 30.0% | |
| TGATAGTATGTTACCTTGTT+TGG | + | chr3.4:10871435-10871454 | MS.gene98750:intron | 30.0% | |
| TGCACCTTGGTTTATTAATT+AGG | + | chr3.4:10874725-10874744 | MS.gene98750:intron | 30.0% | |
| TTGAAACATCTCAAAACACA+GGG | + | chr3.4:10870830-10870849 | MS.gene98750:intron | 30.0% | |
| TTGATATTGAGGGAAATTGT+GGG | + | chr3.4:10871566-10871585 | MS.gene98750:intron | 30.0% | |
| TTTAGCTGCAAGTCAAATAT+GGG | + | chr3.4:10872424-10872443 | MS.gene98750:intron | 30.0% | |
| ! | AAAACCGGTTTATAAGATGA+GGG | + | chr3.4:10874441-10874460 | MS.gene98750:intron | 30.0% |
| ! | CCCTTGAAATGAGTTTATTT+TGG | + | chr3.4:10872062-10872081 | MS.gene98750:intron | 30.0% |
| ! | TATGCTCTCTAAAAACTTCT+CGG | - | chr3.4:10871967-10871986 | None:intergenic | 30.0% |
| ! | TCATTTTCCTTTTCCCTTTT+TGG | - | chr3.4:10872809-10872828 | None:intergenic | 30.0% |
| ! | TTTGAAACATCTCAAAACAC+AGG | + | chr3.4:10870829-10870848 | MS.gene98750:intron | 30.0% |
| !! | AATTCTAAGGCATTTGAGTA+TGG | + | chr3.4:10872285-10872304 | MS.gene98750:intron | 30.0% |
| !! | ATCTTATAAACCGGTTTTGT+AGG | - | chr3.4:10874439-10874458 | None:intergenic | 30.0% |
| !! | ATTAACAGGCATGTTGATTT+GGG | + | chr3.4:10871795-10871814 | MS.gene98750:CDS | 30.0% |
| !! | ATTTGCTTGGTTTTCTTTAG+TGG | + | chr3.4:10871479-10871498 | MS.gene98750:intron | 30.0% |
| !! | TGCCAAGTTGATAAGATTAT+AGG | + | chr3.4:10872718-10872737 | MS.gene98750:intron | 30.0% |
| !! | TTTGCTTGGTTTTCTTTAGT+GGG | + | chr3.4:10871480-10871499 | MS.gene98750:intron | 30.0% |
| !!! | AAGACATGAGTTTTTTACTC+TGG | - | chr3.4:10870666-10870685 | None:intergenic | 30.0% |
| !!! | AGTATAGTTTTGAGTGTGAT+AGG | - | chr3.4:10873372-10873391 | None:intergenic | 30.0% |
| !!! | ATTTTAGTTGAGAAGATACC+AGG | - | chr3.4:10874288-10874307 | None:intergenic | 30.0% |
| !!! | TTCTTTTGTCGTAATTTGCT+TGG | + | chr3.4:10871466-10871485 | MS.gene98750:intron | 30.0% |
| AAAATGAAGGAGGGCAAAAT+TGG | - | chr3.4:10870526-10870545 | None:intergenic | 35.0% | |
| AACATTAGGTATAGACTCAG+AGG | - | chr3.4:10873273-10873292 | None:intergenic | 35.0% | |
| AACCTATCCAAGATGTATTG+GGG | + | chr3.4:10872158-10872177 | MS.gene98750:intron | 35.0% | |
| AAGAACCAGTGCAAATCTAT+TGG | + | chr3.4:10873890-10873909 | MS.gene98750:CDS | 35.0% | |
| AAGATCCTAGGTGTGAAATA+CGG | - | chr3.4:10874629-10874648 | None:intergenic | 35.0% | |
| AAGCACACATAATGACATCA+GGG | + | chr3.4:10874209-10874228 | MS.gene98750:CDS | 35.0% | |
| AATGACATCAGGGAATCTAT+TGG | + | chr3.4:10874219-10874238 | MS.gene98750:CDS | 35.0% | |
| AATTTGTCATCCTGTAATGG+TGG | + | chr3.4:10870791-10870810 | MS.gene98750:intron | 35.0% | |
| ACAATAAAAGGAGACTAGGA+TGG | - | chr3.4:10872689-10872708 | None:intergenic | 35.0% | |
| ACACCTTCAATCAGAAGTTT+CGG | + | chr3.4:10872634-10872653 | MS.gene98750:intron | 35.0% | |
| ACACCTTTGATCATAAGTGT+CGG | + | chr3.4:10870955-10870974 | MS.gene98750:intron | 35.0% | |
| ACGAGTTCTGCAAAAATGAA+TGG | - | chr3.4:10875722-10875741 | None:intergenic | 35.0% | |
| ACTCAACAACAATGCTTGAT+CGG | - | chr3.4:10874384-10874403 | None:intergenic | 35.0% | |
| AGAACCTATCCAAGATGTAT+TGG | + | chr3.4:10872156-10872175 | MS.gene98750:intron | 35.0% | |
| AGACTTAACATGAGTGCTAA+AGG | - | chr3.4:10874923-10874942 | None:intergenic | 35.0% | |
| AGGGAAATTGTGGGTAATTA+AGG | + | chr3.4:10871575-10871594 | MS.gene98750:intron | 35.0% | |
| AGGTTTAACGATATTGAGGT+GGG | - | chr3.4:10873253-10873272 | None:intergenic | 35.0% | |
| AGTGACTCTTAAAATTTGGG+TGG | + | chr3.4:10874401-10874420 | MS.gene98750:intron | 35.0% | |
| ATGAACTTAGTTCAGTTGGT+AGG | - | chr3.4:10871312-10871331 | None:intergenic | 35.0% | |
| ATGTGCTGCCCTTAAAAATA+AGG | - | chr3.4:10875011-10875030 | None:intergenic | 35.0% | |
| CAAAACCGATTGGTAAGATA+AGG | + | chr3.4:10874588-10874607 | MS.gene98750:intron | 35.0% | |
| CAAAGCATAATCAATGCACT+AGG | - | chr3.4:10873571-10873590 | None:intergenic | 35.0% | |
| CAATGTATGTTGCATGTTCT+AGG | + | chr3.4:10873338-10873357 | MS.gene98750:intron | 35.0% | |
| CAATTTACTTACAAGCTGTG+AGG | - | chr3.4:10874813-10874832 | None:intergenic | 35.0% | |
| CACAATAATTTACGTGGTTC+GGG | + | chr3.4:10874676-10874695 | MS.gene98750:intron | 35.0% | |
| CATAATGCCAAAAAGGGAAA+AGG | + | chr3.4:10872799-10872818 | MS.gene98750:intron | 35.0% | |
| CATTTGGATCATTTGTAACG+AGG | - | chr3.4:10875383-10875402 | None:intergenic | 35.0% | |
| CCAACTGAACTAAGTTCATA+AGG | + | chr3.4:10871313-10871332 | MS.gene98750:intron | 35.0% | |
| CCTTATGAACTTAGTTCAGT+TGG | - | chr3.4:10871316-10871335 | None:intergenic | 35.0% | |
| CGTATAATCCACAATGATAG+AGG | - | chr3.4:10875428-10875447 | None:intergenic | 35.0% | |
| CTATCATAAGCTGAAAAGCA+AGG | + | chr3.4:10874177-10874196 | MS.gene98750:CDS | 35.0% | |
| CTGTAATCTCTTAGCTCATT+TGG | - | chr3.4:10875399-10875418 | None:intergenic | 35.0% | |
| CTTCCTCCTAACATAAACTT+TGG | + | chr3.4:10872932-10872951 | MS.gene98750:intron | 35.0% | |
| CTTGATATTGAGGGAAATTG+TGG | + | chr3.4:10871565-10871584 | MS.gene98750:intron | 35.0% | |
| GAAACAAGTGAGTGAGAAAT+AGG | - | chr3.4:10872913-10872932 | None:intergenic | 35.0% | |
| GAACCTATCCAAGATGTATT+GGG | + | chr3.4:10872157-10872176 | MS.gene98750:intron | 35.0% | |
| GAACTCTCATAATGCCAAAA+AGG | + | chr3.4:10872792-10872811 | MS.gene98750:intron | 35.0% | |
| GAATCCCTTATCTTACCAAT+CGG | - | chr3.4:10874596-10874615 | None:intergenic | 35.0% | |
| GACGATGCATAATATATGTC+AGG | - | chr3.4:10871289-10871308 | None:intergenic | 35.0% | |
| GATCACAATAAAAGGAGACT+AGG | - | chr3.4:10872693-10872712 | None:intergenic | 35.0% | |
| GATCATTTGTAACGAGGATA+AGG | - | chr3.4:10875377-10875396 | None:intergenic | 35.0% | |
| GCATAATATATGTCAGGTCT+AGG | - | chr3.4:10871283-10871302 | None:intergenic | 35.0% | |
| GGGGATGAATAAGAAAATGA+AGG | - | chr3.4:10870539-10870558 | None:intergenic | 35.0% | |
| GGTCTTGCCATCTTAAAAAT+TGG | + | chr3.4:10874544-10874563 | MS.gene98750:intron | 35.0% | |
| GTTATAGTACCTTATGTTCC+TGG | - | chr3.4:10875479-10875498 | None:intergenic | 35.0% | |
| GTTTAGCTGCAAGTCAAATA+TGG | + | chr3.4:10872423-10872442 | MS.gene98750:intron | 35.0% | |
| TATATAAGTGACAGCATTGC+AGG | - | chr3.4:10874064-10874083 | None:intergenic | 35.0% | |
| TATGGCTAACCCAAATTCTA+AGG | + | chr3.4:10872272-10872291 | MS.gene98750:intron | 35.0% | |
| TCAGAGGTTTAACGATATTG+AGG | - | chr3.4:10873257-10873276 | None:intergenic | 35.0% | |
| TGAGAATGTAGAGAAGAAAG+AGG | - | chr3.4:10870498-10870517 | None:intergenic | 35.0% | |
| TGCTTGCCAAAGTTTATGTT+AGG | - | chr3.4:10872941-10872960 | None:intergenic | 35.0% | |
| TTCAGCTTATGATAGCCTTT+CGG | - | chr3.4:10874172-10874191 | None:intergenic | 35.0% | |
| TTGCCAAAGTTTATGTTAGG+AGG | - | chr3.4:10872938-10872957 | None:intergenic | 35.0% | |
| ! | AAGATACGAGTTGTAGCTTT+TGG | + | chr3.4:10873665-10873684 | MS.gene98750:intron | 35.0% |
| ! | AGTTGTAGCTTTTGGATGTA+TGG | + | chr3.4:10873673-10873692 | MS.gene98750:intron | 35.0% |
| ! | ATAATCTGAAGCATGCATTC+TGG | + | chr3.4:10874960-10874979 | MS.gene98750:CDS | 35.0% |
| ! | ATGCTCTCTAAAAACTTCTC+GGG | - | chr3.4:10871966-10871985 | None:intergenic | 35.0% |
| ! | ATTTGAAGAGGTATGAGATC+AGG | - | chr3.4:10872873-10872892 | None:intergenic | 35.0% |
| ! | CAAAACCGGTTTATAAGATG+AGG | + | chr3.4:10874440-10874459 | MS.gene98750:intron | 35.0% |
| ! | CACCAAAAAAAAGGTGTATC+TGG | - | chr3.4:10871243-10871262 | None:intergenic | 35.0% |
| ! | CATTAACAGGCATGTTGATT+TGG | + | chr3.4:10871794-10871813 | MS.gene98750:CDS | 35.0% |
| ! | CTATCATTGTGGATTATACG+AGG | + | chr3.4:10875428-10875447 | MS.gene98750:CDS | 35.0% |
| ! | GAGTTTGAGCTTGAGTTTTA+AGG | + | chr3.4:10871048-10871067 | MS.gene98750:intron | 35.0% |
| ! | GATCTGATTTTGTTGGAGAA+AGG | + | chr3.4:10875050-10875069 | MS.gene98750:CDS | 35.0% |
| ! | GTTGACAGATCTGATTTTGT+TGG | + | chr3.4:10875043-10875062 | MS.gene98750:CDS | 35.0% |
| ! | GTTGTAGCTTTTGGATGTAT+GGG | + | chr3.4:10873674-10873693 | MS.gene98750:intron | 35.0% |
| ! | TCGCGTTATTAGTTTATCGA+CGG | - | chr3.4:10875799-10875818 | None:intergenic | 35.0% |
| ! | TGAACTTAGTTCAGTTGGTA+GGG | - | chr3.4:10871311-10871330 | None:intergenic | 35.0% |
| ! | TGGTTGATTTATGAATGAGC+AGG | + | chr3.4:10871704-10871723 | MS.gene98750:intron | 35.0% |
| ! | TTCTGATTGAAGGTGTGTTT+GGG | - | chr3.4:10872630-10872649 | None:intergenic | 35.0% |
| ! | TTGTTTTCCACTAAGATCCT+AGG | - | chr3.4:10874641-10874660 | None:intergenic | 35.0% |
| !! | ATCTTACCAATCGGTTTTGT+AGG | - | chr3.4:10874587-10874606 | None:intergenic | 35.0% |
| !! | GAAAAGGTTCTTTTGGAAGA+TGG | + | chr3.4:10873213-10873232 | MS.gene98750:intron | 35.0% |
| !! | GAACTCTGAAGCATTATCTT+AGG | + | chr3.4:10872335-10872354 | MS.gene98750:intron | 35.0% |
| !! | GAGCTATTTCTAACTGAGTA+GGG | - | chr3.4:10873433-10873452 | None:intergenic | 35.0% |
| !! | GCTCAACCCAATTTTTAAGA+TGG | - | chr3.4:10874554-10874573 | None:intergenic | 35.0% |
| !! | GTTGGCCCAAAACTTTATTT+TGG | + | chr3.4:10873472-10873491 | MS.gene98750:intron | 35.0% |
| !! | TCTTACCAATCGGTTTTGTA+GGG | - | chr3.4:10874586-10874605 | None:intergenic | 35.0% |
| !! | TGAGCTATTTCTAACTGAGT+AGG | - | chr3.4:10873434-10873453 | None:intergenic | 35.0% |
| !! | TTAATAAAGTCTTGGTGACG+TGG | + | chr3.4:10873613-10873632 | MS.gene98750:intron | 35.0% |
| !!! | AATAGGGTTTTAGATGAGGA+GGG | + | chr3.4:10873135-10873154 | MS.gene98750:intron | 35.0% |
| !!! | ATACACCTTTTTTTTGGTGG+TGG | + | chr3.4:10871244-10871263 | MS.gene98750:intron | 35.0% |
| !!! | CACCAGATACACCTTTTTTT+TGG | + | chr3.4:10871238-10871257 | MS.gene98750:intron | 35.0% |
| !!! | CAGATACACCTTTTTTTTGG+TGG | + | chr3.4:10871241-10871260 | MS.gene98750:intron | 35.0% |
| !!! | GTCATTTGGTTTTGAACTTC+AGG | + | chr3.4:10871650-10871669 | MS.gene98750:intron | 35.0% |
| !!! | TAATAGGGTTTTAGATGAGG+AGG | + | chr3.4:10873134-10873153 | MS.gene98750:intron | 35.0% |
| AAACCAGCATCTGCATTAAC+AGG | + | chr3.4:10871781-10871800 | MS.gene98750:CDS | 40.0% | |
| AAACGCAATTACGGATCCAT+TGG | - | chr3.4:10871601-10871620 | None:intergenic | 40.0% | |
| AATACTACTGCAGGAAATCC+TGG | + | chr3.4:10875661-10875680 | MS.gene98750:intron | 40.0% | |
| ACAAGCACTCTATCTTCACT+CGG | + | chr3.4:10873917-10873936 | MS.gene98750:CDS | 40.0% | |
| AGCATTCTCCTCTATCATTG+TGG | + | chr3.4:10875417-10875436 | MS.gene98750:CDS | 40.0% | |
| CAAGCACACATAATGACATC+AGG | + | chr3.4:10874208-10874227 | MS.gene98750:CDS | 40.0% | |
| CATCATGCAAGAAGAACTTG+AGG | - | chr3.4:10870610-10870629 | None:intergenic | 40.0% | |
| CGTTCACATGCTGAAAGAAT+AGG | - | chr3.4:10875354-10875373 | None:intergenic | 40.0% | |
| CTCAACAACAATGCTTGATC+GGG | - | chr3.4:10874383-10874402 | None:intergenic | 40.0% | |
| CTGATGTCATTATGTGTGCT+TGG | - | chr3.4:10874210-10874229 | None:intergenic | 40.0% | |
| CTTCTTTCATTTCCACTACC+TGG | + | chr3.4:10874267-10874286 | MS.gene98750:intron | 40.0% | |
| GACTCCCTCATCTTATAAAC+CGG | - | chr3.4:10874448-10874467 | None:intergenic | 40.0% | |
| GACTTTCAACCTTGAGGAAA+AGG | + | chr3.4:10873197-10873216 | MS.gene98750:intron | 40.0% | |
| GAGGTTTAACGATATTGAGG+TGG | - | chr3.4:10873254-10873273 | None:intergenic | 40.0% | |
| GTAGAGAAGAAAGAGGTTGT+GGG | - | chr3.4:10870491-10870510 | None:intergenic | 40.0% | |
| TACTGCACATGATCCAAATC+TGG | - | chr3.4:10875535-10875554 | None:intergenic | 40.0% | |
| TCAATGTTATGCGTCAGAGT+TGG | + | chr3.4:10870908-10870927 | MS.gene98750:intron | 40.0% | |
| TCCGTTGCTAGAAAGTTTCT+CGG | + | chr3.4:10875858-10875877 | MS.gene98750:CDS | 40.0% | |
| TCGGTAATAACTCTGATCCA+TGG | + | chr3.4:10875877-10875896 | MS.gene98750:CDS | 40.0% | |
| TCTCCATTTCGCAAAAGAAG+TGG | - | chr3.4:10873406-10873425 | None:intergenic | 40.0% | |
| TGACACCGTAAACGCAATTA+CGG | - | chr3.4:10871610-10871629 | None:intergenic | 40.0% | |
| TGCTCCTGAAGTGATAAGAA+TGG | - | chr3.4:10873038-10873057 | None:intergenic | 40.0% | |
| TGGATCCGTAATTGCGTTTA+CGG | + | chr3.4:10871602-10871621 | MS.gene98750:intron | 40.0% | |
| TGTAGAGAAGAAAGAGGTTG+TGG | - | chr3.4:10870492-10870511 | None:intergenic | 40.0% | |
| TGTCTCAGTGTTTCATAGGA+CGG | - | chr3.4:10871139-10871158 | None:intergenic | 40.0% | |
| TGTCTGTCTCAGTGTTTCAT+AGG | - | chr3.4:10871143-10871162 | None:intergenic | 40.0% | |
| TTAAAGTTTGTCAACGGCAG+TGG | + | chr3.4:10875140-10875159 | MS.gene98750:intron | 40.0% | |
| TTATTTGGAAAGAAGGGACC+AGG | - | chr3.4:10875682-10875701 | None:intergenic | 40.0% | |
| TTCCTCAAGGTTGAAAGTCT+GGG | - | chr3.4:10873196-10873215 | None:intergenic | 40.0% | |
| TTCTCTGGTATCACATTCGT+CGG | + | chr3.4:10871851-10871870 | MS.gene98750:CDS | 40.0% | |
| TTCTTATCACTTCAGGAGCA+AGG | + | chr3.4:10873038-10873057 | MS.gene98750:intron | 40.0% | |
| TTGTGGGTAATTAAGGCCAA+TGG | + | chr3.4:10871582-10871601 | MS.gene98750:intron | 40.0% | |
| TTTCACACCTAGGATCTTAG+TGG | + | chr3.4:10874631-10874650 | MS.gene98750:intron | 40.0% | |
| TTTCACGCAGTAAGTGATCT+CGG | - | chr3.4:10875632-10875651 | None:intergenic | 40.0% | |
| TTTCCTCAAGGTTGAAAGTC+TGG | - | chr3.4:10873197-10873216 | None:intergenic | 40.0% | |
| ! | AAGTAATGCGGAGCAGATTT+TGG | + | chr3.4:10873525-10873544 | MS.gene98750:intron | 40.0% |
| ! | ACCGAGAAACTTTCTAGCAA+CGG | - | chr3.4:10875862-10875881 | None:intergenic | 40.0% |
| ! | AGAAACTTTCTAGCAACGGA+CGG | - | chr3.4:10875858-10875877 | None:intergenic | 40.0% |
| ! | ATCAACCTCTGAAAGTGACA+TGG | + | chr3.4:10875761-10875780 | MS.gene98750:CDS | 40.0% |
| ! | ATCAGGGAATCTATTGGTTG+AGG | + | chr3.4:10874225-10874244 | MS.gene98750:CDS | 40.0% |
| ! | CCAAAAGAACCTTTTCCTCA+AGG | - | chr3.4:10873209-10873228 | None:intergenic | 40.0% |
| ! | CCTTGAGGAAAAGGTTCTTT+TGG | + | chr3.4:10873206-10873225 | MS.gene98750:intron | 40.0% |
| ! | CTTCTGATTGAAGGTGTGTT+TGG | - | chr3.4:10872631-10872650 | None:intergenic | 40.0% |
| ! | TCTCCACTTCTTTTGCGAAA+TGG | + | chr3.4:10873400-10873419 | MS.gene98750:intron | 40.0% |
| ! | TCTGATTGAAGGTGTGTTTG+GGG | - | chr3.4:10872629-10872648 | None:intergenic | 40.0% |
| !! | AGCACTGACACTTGAGATTA+AGG | - | chr3.4:10871355-10871374 | None:intergenic | 40.0% |
| !! | CACATTTGTTATGTTCCAGC+TGG | + | chr3.4:10873730-10873749 | MS.gene98750:intron | 40.0% |
| !! | CTCTGAAATTGCATCAGCTA+AGG | + | chr3.4:10875163-10875182 | MS.gene98750:CDS | 40.0% |
| !! | GGGAGCACTTATACTTCTTA+TGG | - | chr3.4:10874363-10874382 | None:intergenic | 40.0% |
| !! | TTCTTCCATGTCACTTTCAG+AGG | - | chr3.4:10875769-10875788 | None:intergenic | 40.0% |
| AATCTCACAGTCCTGTGTGA+AGG | + | chr3.4:10872216-10872235 | MS.gene98750:intron | 45.0% | |
| AATCTCATCCAGTTGGAGCA+AGG | + | chr3.4:10875822-10875841 | MS.gene98750:CDS | 45.0% | |
| ACTTACTGCGTGAAACATCG+TGG | + | chr3.4:10875637-10875656 | MS.gene98750:intron | 45.0% | |
| AGCTGCAGAAGATGATTCTC+TGG | + | chr3.4:10871836-10871855 | MS.gene98750:CDS | 45.0% | |
| ATAGACTGGATCGAGGAGTT+TGG | + | chr3.4:10875195-10875214 | MS.gene98750:CDS | 45.0% | |
| ATCTCACAGTCCTGTGTGAA+GGG | + | chr3.4:10872217-10872236 | MS.gene98750:intron | 45.0% | |
| ATGCCTGTTAATGCAGATGC+TGG | - | chr3.4:10871787-10871806 | None:intergenic | 45.0% | |
| ATGTATGGGAGTTGACATCG+TGG | + | chr3.4:10873688-10873707 | MS.gene98750:intron | 45.0% | |
| CATCGTGGAAATACTACTGC+AGG | + | chr3.4:10875652-10875671 | MS.gene98750:intron | 45.0% | |
| CATGATGCTCTTGATGCTTC+TGG | + | chr3.4:10870623-10870642 | MS.gene98750:CDS | 45.0% | |
| CGGGCGATGAATCATATGAA+GGG | - | chr3.4:10871947-10871966 | None:intergenic | 45.0% | |
| CTCAACCCTACAAAACCGAT+TGG | + | chr3.4:10874578-10874597 | MS.gene98750:intron | 45.0% | |
| CTCCATGACATATCACACGA+GGG | - | chr3.4:10870559-10870578 | None:intergenic | 45.0% | |
| GCACCGAAACTTCTGATTGA+AGG | - | chr3.4:10872640-10872659 | None:intergenic | 45.0% | |
| GCGATTGAATCTCATCCAGT+TGG | + | chr3.4:10875815-10875834 | MS.gene98750:CDS | 45.0% | |
| GGACCGACACTTATGATCAA+AGG | - | chr3.4:10870961-10870980 | None:intergenic | 45.0% | |
| GGGCGATGAATCATATGAAG+GGG | - | chr3.4:10871946-10871965 | None:intergenic | 45.0% | |
| GTTGAGAAGATACCAGGTAG+TGG | - | chr3.4:10874282-10874301 | None:intergenic | 45.0% | |
| TAAGGCTGCTCAACATAGAC+TGG | + | chr3.4:10875181-10875200 | MS.gene98750:CDS | 45.0% | |
| TATGAATGAGCAGGAAGCCA+GGG | + | chr3.4:10871713-10871732 | MS.gene98750:intron | 45.0% | |
| TATGTTCCTGGTACTTCGTC+AGG | - | chr3.4:10875467-10875486 | None:intergenic | 45.0% | |
| TCCATGACATATCACACGAG+GGG | - | chr3.4:10870558-10870577 | None:intergenic | 45.0% | |
| TCGGGCGATGAATCATATGA+AGG | - | chr3.4:10871948-10871967 | None:intergenic | 45.0% | |
| TGGCTCCAATAGATTTGCAC+TGG | - | chr3.4:10873898-10873917 | None:intergenic | 45.0% | |
| TGTGACCGTATTTCACACCT+AGG | + | chr3.4:10874621-10874640 | MS.gene98750:intron | 45.0% | |
| TTAAGATGGCAAGACCCGTT+GGG | - | chr3.4:10874540-10874559 | None:intergenic | 45.0% | |
| TTATGAATGAGCAGGAAGCC+AGG | + | chr3.4:10871712-10871731 | MS.gene98750:intron | 45.0% | |
| TTCCCAGACTTTCAACCTTG+AGG | + | chr3.4:10873191-10873210 | MS.gene98750:intron | 45.0% | |
| TTGTGAACAGAATCCTTCCC+TGG | - | chr3.4:10871733-10871752 | None:intergenic | 45.0% | |
| ! | AAGAGGTATGAGATCAGGTG+GGG | - | chr3.4:10872868-10872887 | None:intergenic | 45.0% |
| ! | ACAATACCTGACGAAGTACC+AGG | + | chr3.4:10875458-10875477 | MS.gene98750:CDS | 45.0% |
| ! | AGTTTGACTCGATGACCCAA+CGG | + | chr3.4:10874522-10874541 | MS.gene98750:intron | 45.0% |
| ! | GAAGAGGTATGAGATCAGGT+GGG | - | chr3.4:10872869-10872888 | None:intergenic | 45.0% |
| ! | GACGAAGTACCAGGAACATA+AGG | + | chr3.4:10875467-10875486 | MS.gene98750:CDS | 45.0% |
| ! | GAGTGAAGATAGAGTGCTTG+TGG | - | chr3.4:10873918-10873937 | None:intergenic | 45.0% |
| ! | TCATATGAAGGGGTGTAGTG+AGG | - | chr3.4:10871936-10871955 | None:intergenic | 45.0% |
| ! | TGAAGAGGTATGAGATCAGG+TGG | - | chr3.4:10872870-10872889 | None:intergenic | 45.0% |
| ! | TTTAAGATGGCAAGACCCGT+TGG | - | chr3.4:10874541-10874560 | None:intergenic | 45.0% |
| !! | CGGTTTTGTAGGGTTGAGTT+AGG | - | chr3.4:10874576-10874595 | None:intergenic | 45.0% |
| !! | GTTCTTCTGAAACCCTGTTG+CGG | - | chr3.4:10873876-10873895 | None:intergenic | 45.0% |
| !! | TTCGGTGCTACATAGTTCCT+CGG | + | chr3.4:10872652-10872671 | MS.gene98750:intron | 45.0% |
| !!! | ACCTTTTTTTTGGTGGTGGC+CGG | + | chr3.4:10871248-10871267 | MS.gene98750:intron | 45.0% |
| !!! | CAGGTTTTGACTCATCGTTC+GGG | + | chr3.4:10874034-10874053 | MS.gene98750:intron | 45.0% |
| !!! | GCAGGTTTTGACTCATCGTT+CGG | + | chr3.4:10874033-10874052 | MS.gene98750:intron | 45.0% |
| !!! | TTTGTATTTTTTATTTTTTT+TGG | + | chr3.4:10871015-10871034 | MS.gene98750:intron | 5.0% |
| AGAGGAAGCCTGATAACAGG+TGG | - | chr3.4:10872184-10872203 | None:intergenic | 50.0% | |
| CCTCCATGACATATCACACG+AGG | - | chr3.4:10870560-10870579 | None:intergenic | 50.0% | |
| CCTCGTGTGATATGTCATGG+AGG | + | chr3.4:10870557-10870576 | MS.gene98750:CDS | 50.0% | |
| CTCATAACGGCAGCCAACTA+GGG | + | chr3.4:10873450-10873469 | MS.gene98750:intron | 50.0% | |
| GCTAGAGGAAGCCTGATAAC+AGG | - | chr3.4:10872187-10872206 | None:intergenic | 50.0% | |
| GCTCAACATAGACTGGATCG+AGG | + | chr3.4:10875188-10875207 | MS.gene98750:CDS | 50.0% | |
| GGCCCCAATACATCTTGGAT+AGG | - | chr3.4:10872163-10872182 | None:intergenic | 50.0% | |
| GGTCTGACACACATCAACGT+CGG | - | chr3.4:10872608-10872627 | None:intergenic | 50.0% | |
| TAAGCACATCCTTCACGCTC+AGG | + | chr3.4:10874486-10874505 | MS.gene98750:intron | 50.0% | |
| TATTGGGGCCACCTGTTATC+AGG | + | chr3.4:10872173-10872192 | MS.gene98750:intron | 50.0% | |
| TCATCCAGTTGGAGCAAGGA+TGG | + | chr3.4:10875826-10875845 | MS.gene98750:CDS | 50.0% | |
| TCCCCTCGTGTGATATGTCA+TGG | + | chr3.4:10870554-10870573 | MS.gene98750:CDS | 50.0% | |
| TCTCACAGTCCTGTGTGAAG+GGG | + | chr3.4:10872218-10872237 | MS.gene98750:intron | 50.0% | |
| ! | AGAGGTATGAGATCAGGTGG+GGG | - | chr3.4:10872867-10872886 | None:intergenic | 50.0% |
| ! | ATCTAGTTTCTGCTGCCAGC+TGG | - | chr3.4:10873748-10873767 | None:intergenic | 50.0% |
| ! | GACATGAGGCGTTCATTGTC+TGG | + | chr3.4:10875236-10875255 | MS.gene98750:CDS | 50.0% |
| ! | GAGATTTAGAGCGAGGCTAG+AGG | - | chr3.4:10872202-10872221 | None:intergenic | 50.0% |
| ! | GGACTGTGAGATTTAGAGCG+AGG | - | chr3.4:10872209-10872228 | None:intergenic | 50.0% |
| ! | GTTTGACTCGATGACCCAAC+GGG | + | chr3.4:10874523-10874542 | MS.gene98750:intron | 50.0% |
| !! | ACGAAAGCATCGACAGGAAG+CGG | - | chr3.4:10871879-10871898 | None:intergenic | 50.0% |
| !! | CTTGCAACGAAAGCATCGAC+AGG | - | chr3.4:10871885-10871904 | None:intergenic | 50.0% |
| !!! | AGTTTTGGGCCAACCCTAGT+TGG | - | chr3.4:10873466-10873485 | None:intergenic | 50.0% |
| !!! | CCTTTTTTTTGGTGGTGGCC+GGG | + | chr3.4:10871249-10871268 | MS.gene98750:intron | 50.0% |
| !!! | CTTTTTTTTGGTGGTGGCCG+GGG | + | chr3.4:10871250-10871269 | MS.gene98750:intron | 50.0% |
| AACCAAGGTGCATGCTCCTG+TGG | - | chr3.4:10874717-10874736 | None:intergenic | 55.0% | |
| AATGAGCAGGAAGCCAGGGA+AGG | + | chr3.4:10871717-10871736 | MS.gene98750:intron | 55.0% | |
| ACAGTCCTGTGTGAAGGGGT+GGG | + | chr3.4:10872222-10872241 | MS.gene98750:intron | 55.0% | |
| ACATCCTTCACGCTCAGGAC+TGG | + | chr3.4:10874491-10874510 | MS.gene98750:intron | 55.0% | |
| AGGCTCCAACGTTCAACACG+CGG | + | chr3.4:10870577-10870596 | MS.gene98750:CDS | 55.0% | |
| AGTTGCCGCGTGTTGAACGT+TGG | - | chr3.4:10870585-10870604 | None:intergenic | 55.0% | |
| ATGTCCAGTCCTGAGCGTGA+AGG | - | chr3.4:10874498-10874517 | None:intergenic | 55.0% | |
| CAGGTGGCCCCAATACATCT+TGG | - | chr3.4:10872168-10872187 | None:intergenic | 55.0% | |
| CCCGGCCACCACCAAAAAAA+AGG | - | chr3.4:10871252-10871271 | None:intergenic | 55.0% | |
| GACTCCATCCTTGCTCCAAC+TGG | - | chr3.4:10875833-10875852 | None:intergenic | 55.0% | |
| GCTCATAACGGCAGCCAACT+AGG | + | chr3.4:10873449-10873468 | MS.gene98750:intron | 55.0% | |
| GGATGGTGCAAACATTGCCG+AGG | - | chr3.4:10872672-10872691 | None:intergenic | 55.0% | |
| GTTTGGACCACTGTGCGCTT+TGG | + | chr3.4:10875212-10875231 | MS.gene98750:CDS | 55.0% | |
| TAACGGCAGCCAACTAGGGT+TGG | + | chr3.4:10873454-10873473 | MS.gene98750:intron | 55.0% | |
| TCAAACCTCTGGCCGCAACA+GGG | + | chr3.4:10873861-10873880 | MS.gene98750:intron | 55.0% | |
| TTCAAACCTCTGGCCGCAAC+AGG | + | chr3.4:10873860-10873879 | MS.gene98750:intron | 55.0% | |
| ACACACCCACCCCTTCACAC+AGG | - | chr3.4:10872230-10872249 | None:intergenic | 60.0% | |
| CACAGTCCTGTGTGAAGGGG+TGG | + | chr3.4:10872221-10872240 | MS.gene98750:intron | 60.0% | |
| CATGTCGCCAAAGCGCACAG+TGG | - | chr3.4:10875222-10875241 | None:intergenic | 60.0% | |
| CTCCTGTGGACGAAGGCAAG+AGG | - | chr3.4:10874703-10874722 | None:intergenic | 60.0% | |
| CTGTGCGCTTTGGCGACATG+AGG | + | chr3.4:10875222-10875241 | MS.gene98750:CDS | 60.0% | |
| GACCTCTTGCCTTCGTCCAC+AGG | + | chr3.4:10874698-10874717 | MS.gene98750:intron | 60.0% | |
| GTGCATGCTCCTGTGGACGA+AGG | - | chr3.4:10874710-10874729 | None:intergenic | 60.0% | |
| TGAAACCCTGTTGCGGCCAG+AGG | - | chr3.4:10873869-10873888 | None:intergenic | 60.0% | |
| ! | GTCCACAGGAGCATGCACCT+TGG | + | chr3.4:10874712-10874731 | MS.gene98750:intron | 60.0% |
| ! | CAGGTCTAGGGTTCGAGCCC+CGG | - | chr3.4:10871270-10871289 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 10870461 | 10875902 | 10870461 | ID=MS.gene98750 |
| chr3.4 | mRNA | 10870461 | 10875902 | 10870461 | ID=MS.gene98750.t1;Parent=MS.gene98750 |
| chr3.4 | exon | 10870461 | 10870667 | 10870461 | ID=MS.gene98750.t1.exon1;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10870461 | 10870667 | 10870461 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10871726 | 10872010 | 10871726 | ID=MS.gene98750.t1.exon2;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10871726 | 10872010 | 10871726 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10873882 | 10873938 | 10873882 | ID=MS.gene98750.t1.exon3;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10873882 | 10873938 | 10873882 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10874037 | 10874246 | 10874037 | ID=MS.gene98750.t1.exon4;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10874037 | 10874246 | 10874037 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10874953 | 10875071 | 10874953 | ID=MS.gene98750.t1.exon5;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10874953 | 10875071 | 10874953 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10875160 | 10875257 | 10875160 | ID=MS.gene98750.t1.exon6;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10875160 | 10875257 | 10875160 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10875364 | 10875488 | 10875364 | ID=MS.gene98750.t1.exon7;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10875364 | 10875488 | 10875364 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| chr3.4 | exon | 10875735 | 10875902 | 10875735 | ID=MS.gene98750.t1.exon8;Parent=MS.gene98750.t1 |
| chr3.4 | CDS | 10875735 | 10875902 | 10875735 | ID=cds.MS.gene98750.t1;Parent=MS.gene98750.t1 |
| Gene Sequence |
| Protein sequence |
