Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068820.t1 | XP_013468054.1 | 98.9 | 88 | 1 | 0 | 1 | 88 | 91 | 178 | 7.30E-44 | 186 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068820.t1 | O81864 | 81.8 | 88 | 16 | 0 | 1 | 88 | 100 | 187 | 5.1e-38 | 157.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene068820.t1 | A0A072VKD1 | 98.9 | 88 | 1 | 0 | 1 | 88 | 91 | 178 | 5.3e-44 | 186.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049137 | MS.gene068820 | 0.823251 | 1.53E-53 | -1.69E-46 |
MS.gene049171 | MS.gene068820 | 0.902857 | 6.31E-79 | -1.69E-46 |
MS.gene049217 | MS.gene068820 | 0.803382 | 3.58E-49 | -1.69E-46 |
MS.gene04921 | MS.gene068820 | -0.801868 | 7.35E-49 | -1.69E-46 |
MS.gene049222 | MS.gene068820 | 0.85647 | 3.15E-62 | -1.69E-46 |
MS.gene049257 | MS.gene068820 | 0.832296 | 1.03E-55 | -1.69E-46 |
MS.gene049281 | MS.gene068820 | -0.812116 | 4.98E-51 | -1.69E-46 |
MS.gene049285 | MS.gene068820 | 0.857638 | 1.42E-62 | -1.69E-46 |
MS.gene049320 | MS.gene068820 | 0.84456 | 7.01E-59 | -1.69E-46 |
MS.gene049373 | MS.gene068820 | 0.803822 | 2.90E-49 | -1.69E-46 |
MS.gene04939 | MS.gene068820 | 0.803732 | 3.03E-49 | -1.69E-46 |
MS.gene049609 | MS.gene068820 | 0.848141 | 7.40E-60 | -1.69E-46 |
MS.gene049627 | MS.gene068820 | 0.801847 | 7.42E-49 | -1.69E-46 |
MS.gene049633 | MS.gene068820 | 0.856838 | 2.45E-62 | -1.69E-46 |
MS.gene049805 | MS.gene068820 | 0.806817 | 6.84E-50 | -1.69E-46 |
MS.gene049865 | MS.gene068820 | 0.806322 | 8.70E-50 | -1.69E-46 |
MS.gene05010 | MS.gene068820 | 0.825949 | 3.55E-54 | -1.69E-46 |
MS.gene050163 | MS.gene068820 | 0.823934 | 1.06E-53 | -1.69E-46 |
MS.gene050165 | MS.gene068820 | 0.817774 | 2.77E-52 | -1.69E-46 |
MS.gene050170 | MS.gene068820 | 0.896452 | 3.64E-76 | -1.69E-46 |
MS.gene050315 | MS.gene068820 | 0.807017 | 6.21E-50 | -1.69E-46 |
MS.gene050323 | MS.gene068820 | 0.843603 | 1.27E-58 | -1.69E-46 |
MS.gene050338 | MS.gene068820 | -0.808468 | 3.05E-50 | -1.69E-46 |
MS.gene050444 | MS.gene068820 | 0.805434 | 1.34E-49 | -1.69E-46 |
MS.gene050479 | MS.gene068820 | -0.810212 | 1.29E-50 | -1.69E-46 |
MS.gene050496 | MS.gene068820 | 0.849444 | 3.22E-60 | -1.69E-46 |
MS.gene050504 | MS.gene068820 | 0.869396 | 3.19E-66 | -1.69E-46 |
MS.gene050518 | MS.gene068820 | 0.822862 | 1.89E-53 | -1.69E-46 |
MS.gene050538 | MS.gene068820 | 0.84312 | 1.70E-58 | -1.69E-46 |
MS.gene050547 | MS.gene068820 | -0.810494 | 1.12E-50 | -1.69E-46 |
MS.gene050577 | MS.gene068820 | 0.894672 | 1.98E-75 | -1.69E-46 |
MS.gene050612 | MS.gene068820 | 0.863618 | 2.19E-64 | -1.69E-46 |
MS.gene050647 | MS.gene068820 | -0.802105 | 6.57E-49 | -1.69E-46 |
MS.gene050675 | MS.gene068820 | 0.836477 | 9.14E-57 | -1.69E-46 |
MS.gene050699 | MS.gene068820 | 0.867576 | 1.24E-65 | -1.69E-46 |
MS.gene050747 | MS.gene068820 | 0.869424 | 3.13E-66 | -1.69E-46 |
MS.gene050772 | MS.gene068820 | 0.833954 | 3.96E-56 | -1.69E-46 |
MS.gene05080 | MS.gene068820 | 0.855414 | 6.41E-62 | -1.69E-46 |
MS.gene05081 | MS.gene068820 | 0.880178 | 6.80E-70 | -1.69E-46 |
MS.gene050868 | MS.gene068820 | 0.866296 | 3.16E-65 | -1.69E-46 |
MS.gene050871 | MS.gene068820 | 0.863515 | 2.36E-64 | -1.69E-46 |
MS.gene050904 | MS.gene068820 | 0.856861 | 2.42E-62 | -1.69E-46 |
MS.gene050950 | MS.gene068820 | 0.868336 | 7.04E-66 | -1.69E-46 |
MS.gene050986 | MS.gene068820 | 0.855513 | 6.00E-62 | -1.69E-46 |
MS.gene05100 | MS.gene068820 | 0.806052 | 9.92E-50 | -1.69E-46 |
MS.gene051138 | MS.gene068820 | -0.814831 | 1.26E-51 | -1.69E-46 |
MS.gene051268 | MS.gene068820 | 0.827025 | 1.96E-54 | -1.69E-46 |
MS.gene051317 | MS.gene068820 | 0.866197 | 3.40E-65 | -1.69E-46 |
MS.gene051551 | MS.gene068820 | 0.817405 | 3.35E-52 | -1.69E-46 |
MS.gene051552 | MS.gene068820 | -0.811707 | 6.12E-51 | -1.69E-46 |
MS.gene051651 | MS.gene068820 | -0.80713 | 5.87E-50 | -1.69E-46 |
MS.gene051666 | MS.gene068820 | 0.802327 | 5.91E-49 | -1.69E-46 |
MS.gene051694 | MS.gene068820 | 0.803495 | 3.39E-49 | -1.69E-46 |
MS.gene051810 | MS.gene068820 | 0.809001 | 2.35E-50 | -1.69E-46 |
MS.gene051838 | MS.gene068820 | 0.892055 | 2.26E-74 | -1.69E-46 |
MS.gene051941 | MS.gene068820 | 0.801477 | 8.84E-49 | -1.69E-46 |
MS.gene051973 | MS.gene068820 | -0.846614 | 1.94E-59 | -1.69E-46 |
MS.gene052015 | MS.gene068820 | -0.843648 | 1.23E-58 | -1.69E-46 |
MS.gene052129 | MS.gene068820 | -0.808193 | 3.49E-50 | -1.69E-46 |
MS.gene052164 | MS.gene068820 | 0.873427 | 1.48E-67 | -1.69E-46 |
MS.gene052211 | MS.gene068820 | -0.810294 | 1.24E-50 | -1.69E-46 |
MS.gene05240 | MS.gene068820 | -0.806246 | 9.03E-50 | -1.69E-46 |
MS.gene052482 | MS.gene068820 | 0.859224 | 4.79E-63 | -1.69E-46 |
MS.gene052486 | MS.gene068820 | 0.86042 | 2.09E-63 | -1.69E-46 |
MS.gene052494 | MS.gene068820 | -0.841581 | 4.36E-58 | -1.69E-46 |
MS.gene052501 | MS.gene068820 | 0.837536 | 4.91E-57 | -1.69E-46 |
MS.gene052503 | MS.gene068820 | 0.880306 | 6.12E-70 | -1.69E-46 |
MS.gene052505 | MS.gene068820 | 0.825577 | 4.35E-54 | -1.69E-46 |
MS.gene052506 | MS.gene068820 | 0.820708 | 5.95E-53 | -1.69E-46 |
MS.gene052606 | MS.gene068820 | -0.844481 | 7.36E-59 | -1.69E-46 |
MS.gene052615 | MS.gene068820 | 0.842568 | 2.39E-58 | -1.69E-46 |
MS.gene052822 | MS.gene068820 | 0.814169 | 1.77E-51 | -1.69E-46 |
MS.gene052823 | MS.gene068820 | 0.879168 | 1.55E-69 | -1.69E-46 |
MS.gene052825 | MS.gene068820 | 0.883369 | 4.76E-71 | -1.69E-46 |
MS.gene052870 | MS.gene068820 | 0.816063 | 6.71E-52 | -1.69E-46 |
MS.gene052872 | MS.gene068820 | 0.834283 | 3.28E-56 | -1.69E-46 |
MS.gene052966 | MS.gene068820 | 0.838017 | 3.69E-57 | -1.69E-46 |
MS.gene052982 | MS.gene068820 | 0.808427 | 3.11E-50 | -1.69E-46 |
MS.gene052986 | MS.gene068820 | 0.807377 | 5.21E-50 | -1.69E-46 |
MS.gene052987 | MS.gene068820 | 0.803888 | 2.81E-49 | -1.69E-46 |
MS.gene053097 | MS.gene068820 | -0.840824 | 6.89E-58 | -1.69E-46 |
MS.gene053117 | MS.gene068820 | 0.813382 | 2.63E-51 | -1.69E-46 |
MS.gene053203 | MS.gene068820 | 0.888412 | 6.04E-73 | -1.69E-46 |
MS.gene053207 | MS.gene068820 | 0.822625 | 2.14E-53 | -1.69E-46 |
MS.gene053213 | MS.gene068820 | 0.831761 | 1.39E-55 | -1.69E-46 |
MS.gene053286 | MS.gene068820 | 0.832744 | 7.94E-56 | -1.69E-46 |
MS.gene053420 | MS.gene068820 | -0.806549 | 7.79E-50 | -1.69E-46 |
MS.gene053421 | MS.gene068820 | -0.823555 | 1.30E-53 | -1.69E-46 |
MS.gene053436 | MS.gene068820 | 0.836806 | 7.54E-57 | -1.69E-46 |
MS.gene053479 | MS.gene068820 | 0.86112 | 1.28E-63 | -1.69E-46 |
MS.gene053480 | MS.gene068820 | 0.873625 | 1.27E-67 | -1.69E-46 |
MS.gene053574 | MS.gene068820 | 0.832099 | 1.15E-55 | -1.69E-46 |
MS.gene053579 | MS.gene068820 | 0.808409 | 3.14E-50 | -1.69E-46 |
MS.gene053632 | MS.gene068820 | 0.834913 | 2.28E-56 | -1.69E-46 |
MS.gene053824 | MS.gene068820 | 0.868789 | 5.03E-66 | -1.69E-46 |
MS.gene054107 | MS.gene068820 | 0.812469 | 4.17E-51 | -1.69E-46 |
MS.gene054343 | MS.gene068820 | 0.866269 | 3.23E-65 | -1.69E-46 |
MS.gene054344 | MS.gene068820 | 0.881272 | 2.75E-70 | -1.69E-46 |
MS.gene054408 | MS.gene068820 | 0.847739 | 9.56E-60 | -1.69E-46 |
MS.gene054595 | MS.gene068820 | 0.842073 | 3.23E-58 | -1.69E-46 |
MS.gene054600 | MS.gene068820 | 0.846869 | 1.66E-59 | -1.69E-46 |
MS.gene054642 | MS.gene068820 | 0.827458 | 1.55E-54 | -1.69E-46 |
MS.gene054706 | MS.gene068820 | -0.844795 | 6.06E-59 | -1.69E-46 |
MS.gene05470 | MS.gene068820 | 0.921835 | 2.15E-88 | -1.69E-46 |
MS.gene054742 | MS.gene068820 | -0.801913 | 7.20E-49 | -1.69E-46 |
MS.gene054851 | MS.gene068820 | -0.822992 | 1.76E-53 | -1.69E-46 |
MS.gene054884 | MS.gene068820 | -0.849798 | 2.57E-60 | -1.69E-46 |
MS.gene054927 | MS.gene068820 | 0.845376 | 4.22E-59 | -1.69E-46 |
MS.gene05494 | MS.gene068820 | 0.800635 | 1.31E-48 | -1.69E-46 |
MS.gene054954 | MS.gene068820 | 0.861568 | 9.36E-64 | -1.69E-46 |
MS.gene054959 | MS.gene068820 | -0.820423 | 6.91E-53 | -1.69E-46 |
MS.gene055206 | MS.gene068820 | 0.837304 | 5.63E-57 | -1.69E-46 |
MS.gene055224 | MS.gene068820 | 0.800099 | 1.69E-48 | -1.69E-46 |
MS.gene055289 | MS.gene068820 | 0.824644 | 7.22E-54 | -1.69E-46 |
MS.gene055362 | MS.gene068820 | 0.865505 | 5.62E-65 | -1.69E-46 |
MS.gene055370 | MS.gene068820 | 0.804698 | 1.91E-49 | -1.69E-46 |
MS.gene055502 | MS.gene068820 | 0.87447 | 6.59E-68 | -1.69E-46 |
MS.gene055577 | MS.gene068820 | 0.886848 | 2.39E-72 | -1.69E-46 |
MS.gene055729 | MS.gene068820 | -0.813068 | 3.09E-51 | -1.69E-46 |
MS.gene055730 | MS.gene068820 | -0.812679 | 3.75E-51 | -1.69E-46 |
MS.gene055731 | MS.gene068820 | -0.831916 | 1.27E-55 | -1.69E-46 |
MS.gene055748 | MS.gene068820 | 0.880065 | 7.46E-70 | -1.69E-46 |
MS.gene055750 | MS.gene068820 | 0.83538 | 1.74E-56 | -1.69E-46 |
MS.gene055751 | MS.gene068820 | 0.865154 | 7.25E-65 | -1.69E-46 |
MS.gene05589 | MS.gene068820 | 0.910735 | 1.34E-82 | -1.69E-46 |
MS.gene055941 | MS.gene068820 | 0.826571 | 2.52E-54 | -1.69E-46 |
MS.gene055977 | MS.gene068820 | -0.80187 | 7.34E-49 | -1.69E-46 |
MS.gene056040 | MS.gene068820 | 0.846121 | 2.65E-59 | -1.69E-46 |
MS.gene056166 | MS.gene068820 | 0.817132 | 3.86E-52 | -1.69E-46 |
MS.gene056218 | MS.gene068820 | -0.801665 | 8.09E-49 | -1.69E-46 |
MS.gene056266 | MS.gene068820 | 0.815567 | 8.66E-52 | -1.69E-46 |
MS.gene056387 | MS.gene068820 | 0.833506 | 5.13E-56 | -1.69E-46 |
MS.gene056409 | MS.gene068820 | 0.805998 | 1.02E-49 | -1.69E-46 |
MS.gene056504 | MS.gene068820 | 0.883157 | 5.69E-71 | -1.69E-46 |
MS.gene056510 | MS.gene068820 | 0.844675 | 6.53E-59 | -1.69E-46 |
MS.gene056550 | MS.gene068820 | -0.822364 | 2.46E-53 | -1.69E-46 |
MS.gene056590 | MS.gene068820 | -0.817111 | 3.91E-52 | -1.69E-46 |
MS.gene056591 | MS.gene068820 | -0.819305 | 1.25E-52 | -1.69E-46 |
MS.gene056610 | MS.gene068820 | 0.837694 | 4.47E-57 | -1.69E-46 |
MS.gene056657 | MS.gene068820 | 0.838422 | 2.90E-57 | -1.69E-46 |
MS.gene056692 | MS.gene068820 | 0.866156 | 3.50E-65 | -1.69E-46 |
MS.gene056694 | MS.gene068820 | -0.827095 | 1.89E-54 | -1.69E-46 |
MS.gene056748 | MS.gene068820 | -0.800688 | 1.28E-48 | -1.69E-46 |
MS.gene056877 | MS.gene068820 | 0.829202 | 5.87E-55 | -1.69E-46 |
MS.gene056988 | MS.gene068820 | -0.846669 | 1.88E-59 | -1.69E-46 |
MS.gene057048 | MS.gene068820 | 0.828623 | 8.11E-55 | -1.69E-46 |
MS.gene057196 | MS.gene068820 | 0.844062 | 9.54E-59 | -1.69E-46 |
MS.gene057332 | MS.gene068820 | 0.858201 | 9.69E-63 | -1.69E-46 |
MS.gene057416 | MS.gene068820 | 0.808333 | 3.26E-50 | -1.69E-46 |
MS.gene057658 | MS.gene068820 | 0.915332 | 6.68E-85 | -1.69E-46 |
MS.gene057831 | MS.gene068820 | 0.882384 | 1.09E-70 | -1.69E-46 |
MS.gene05787 | MS.gene068820 | 0.807912 | 4.01E-50 | -1.69E-46 |
MS.gene058130 | MS.gene068820 | 0.808155 | 3.56E-50 | -1.69E-46 |
MS.gene058157 | MS.gene068820 | 0.839681 | 1.37E-57 | -1.69E-46 |
MS.gene058334 | MS.gene068820 | -0.852753 | 3.75E-61 | -1.69E-46 |
MS.gene058338 | MS.gene068820 | 0.84824 | 6.95E-60 | -1.69E-46 |
MS.gene05837 | MS.gene068820 | 0.876377 | 1.47E-68 | -1.69E-46 |
MS.gene058418 | MS.gene068820 | -0.840367 | 9.08E-58 | -1.69E-46 |
MS.gene058419 | MS.gene068820 | 0.861674 | 8.69E-64 | -1.69E-46 |
MS.gene058544 | MS.gene068820 | 0.899012 | 3.02E-77 | -1.69E-46 |
MS.gene058603 | MS.gene068820 | -0.821862 | 3.22E-53 | -1.69E-46 |
MS.gene058723 | MS.gene068820 | 0.8096 | 1.75E-50 | -1.69E-46 |
MS.gene058773 | MS.gene068820 | 0.839844 | 1.24E-57 | -1.69E-46 |
MS.gene058838 | MS.gene068820 | 0.904651 | 9.82E-80 | -1.69E-46 |
MS.gene05883 | MS.gene068820 | 0.815436 | 9.25E-52 | -1.69E-46 |
MS.gene059022 | MS.gene068820 | 0.866775 | 2.23E-65 | -1.69E-46 |
MS.gene059023 | MS.gene068820 | 0.922722 | 6.79E-89 | -1.69E-46 |
MS.gene059103 | MS.gene068820 | -0.83874 | 2.40E-57 | -1.69E-46 |
MS.gene05914 | MS.gene068820 | 0.915313 | 6.83E-85 | -1.69E-46 |
MS.gene059303 | MS.gene068820 | 0.863312 | 2.72E-64 | -1.69E-46 |
MS.gene05934 | MS.gene068820 | 0.80346 | 3.45E-49 | -1.69E-46 |
MS.gene059480 | MS.gene068820 | -0.838538 | 2.71E-57 | -1.69E-46 |
MS.gene059512 | MS.gene068820 | 0.827844 | 1.25E-54 | -1.69E-46 |
MS.gene059526 | MS.gene068820 | -0.812001 | 5.28E-51 | -1.69E-46 |
MS.gene05960 | MS.gene068820 | -0.843144 | 1.68E-58 | -1.69E-46 |
MS.gene059667 | MS.gene068820 | 0.857519 | 1.54E-62 | -1.69E-46 |
MS.gene059677 | MS.gene068820 | 0.876428 | 1.41E-68 | -1.69E-46 |
MS.gene059718 | MS.gene068820 | 0.869649 | 2.64E-66 | -1.69E-46 |
MS.gene059756 | MS.gene068820 | 0.86182 | 7.84E-64 | -1.69E-46 |
MS.gene059801 | MS.gene068820 | 0.811144 | 8.11E-51 | -1.69E-46 |
MS.gene059837 | MS.gene068820 | 0.821062 | 4.93E-53 | -1.69E-46 |
MS.gene059865 | MS.gene068820 | 0.844583 | 6.91E-59 | -1.69E-46 |
MS.gene06000 | MS.gene068820 | 0.86769 | 1.14E-65 | -1.69E-46 |
MS.gene060087 | MS.gene068820 | -0.81792 | 2.57E-52 | -1.69E-46 |
MS.gene06027 | MS.gene068820 | 0.841775 | 3.87E-58 | -1.69E-46 |
MS.gene060703 | MS.gene068820 | 0.801937 | 7.11E-49 | -1.69E-46 |
MS.gene060762 | MS.gene068820 | 0.877956 | 4.14E-69 | -1.69E-46 |
MS.gene060778 | MS.gene068820 | 0.832201 | 1.08E-55 | -1.69E-46 |
MS.gene06077 | MS.gene068820 | 0.896712 | 2.83E-76 | -1.69E-46 |
MS.gene060835 | MS.gene068820 | 0.807851 | 4.13E-50 | -1.69E-46 |
MS.gene06092 | MS.gene068820 | 0.873223 | 1.74E-67 | -1.69E-46 |
MS.gene060982 | MS.gene068820 | 0.875484 | 2.97E-68 | -1.69E-46 |
MS.gene061044 | MS.gene068820 | -0.837167 | 6.10E-57 | -1.69E-46 |
MS.gene061150 | MS.gene068820 | 0.864553 | 1.12E-64 | -1.69E-46 |
MS.gene061231 | MS.gene068820 | 0.818867 | 1.57E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 0 sgRNAs with CRISPR-Local
Find 52 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TAGGTTTTTTTTTTTATTTA+GGG | - | 10705:4563-4582 | MS.gene068820:intron | 10.0% |
!!! | TTTGTTTTATTTTATTTTGT+TGG | - | 10705:4523-4542 | MS.gene068820:intron | 10.0% |
!! | AAAAATTTCAGACTTATATA+TGG | - | 10705:5154-5173 | MS.gene068820:intron | 15.0% |
!! | AAATTCAGAATTTATAGATA+TGG | - | 10705:4483-4502 | MS.gene068820:CDS | 15.0% |
!! | AGTAAATGTTATTATATTGA+AGG | - | 10705:4671-4690 | MS.gene068820:intron | 15.0% |
!!! | GTAGGTTTTTTTTTTTATTT+AGG | - | 10705:4562-4581 | MS.gene068820:intron | 15.0% |
!! | AAATTCTGAATTTAGCATAT+TGG | + | 10705:4476-4495 | MS.gene068820:intergenic | 20.0% |
!! | AATGCTAATAGACAAATTAA+TGG | - | 10705:4587-4606 | MS.gene068820:intron | 20.0% |
!! | TTGATTATAACCAGTAAATT+TGG | - | 10705:4822-4841 | MS.gene068820:intron | 20.0% |
!!! | ACAAACTTATTTTGATCATT+TGG | + | 10705:4989-5008 | MS.gene068820:intergenic | 20.0% |
!!! | ATTGGTTTCTAGATATATAT+AGG | + | 10705:4458-4477 | MS.gene068820:intergenic | 20.0% |
!!! | CAAACTTATTTTGATCATTT+GGG | + | 10705:4988-5007 | MS.gene068820:intergenic | 20.0% |
!!! | TAATAGACAAATTAATGGAT+AGG | - | 10705:4592-4611 | MS.gene068820:intron | 20.0% |
! | AGATATATATAGGAGATTTG+AGG | + | 10705:4448-4467 | MS.gene068820:intergenic | 25.0% |
! | TATAACCAGTAAATTTGGTT+TGG | - | 10705:4827-4846 | MS.gene068820:intron | 25.0% |
!! | TGAAATTTTTACTGTCCTTA+TGG | + | 10705:5144-5163 | MS.gene068820:intergenic | 25.0% |
!!! | CATACTAAGTTTTTTCCATA+AGG | - | 10705:5126-5145 | MS.gene068820:intron | 25.0% |
AAACACCAAACCAAATTTAC+TGG | + | 10705:4835-4854 | MS.gene06882:intergenic | 30.0% | |
AAGGTTGAGATTCATTACTA+TGG | - | 10705:4690-4709 | MS.gene068820:intron | 30.0% | |
AGAAGTTAATCTTGTGAGAA+TGG | - | 10705:5238-5257 | MS.gene068820:intron | 30.0% | |
CAGACTTATATATGGATCTT+TGG | - | 10705:5162-5181 | MS.gene068820:intron | 30.0% | |
CTTAGTATGCAACATGATAA+AGG | + | 10705:5216-5235 | MS.gene068820:intergenic | 30.0% | |
TTAAATGAGAGAACTATACC+TGG | + | 10705:4411-4430 | MS.gene068820:intergenic | 30.0% | |
! | GACAAATTAATGGATAGGTA+AGG | - | 10705:4597-4616 | MS.gene068820:intron | 30.0% |
AGGACAAAGACAAAAGGATT+AGG | + | 10705:4783-4802 | MS.gene068820:intergenic | 35.0% | |
ATTCTCATCTTTGTGGTCAT+AGG | + | 10705:4754-4773 | MS.gene068820:intergenic | 35.0% | |
GAAGCAATTAAGCATCAATG+TGG | - | 10705:5070-5089 | MS.gene068820:intron | 35.0% | |
GGTAGAGTATGAGAATTTGT+AGG | - | 10705:4544-4563 | MS.gene068820:intron | 35.0% | |
TATGACCACAAAGATGAGAA+TGG | - | 10705:4753-4772 | MS.gene068820:intron | 35.0% | |
! | AATCCTTTTGTCTTTGTCCT+TGG | - | 10705:4783-4802 | MS.gene068820:intron | 35.0% |
! | ATGCAACATGATAAAGGCAT+AGG | + | 10705:5210-5229 | MS.gene068820:intergenic | 35.0% |
! | CTTAATTGCTTCTTGAGTTG+TGG | + | 10705:5062-5081 | MS.gene068820:intergenic | 35.0% |
GAACCAAGGACAAAGACAAA+AGG | + | 10705:4789-4808 | MS.gene068820:intergenic | 40.0% | |
GATCACCATTCTCATCTTTG+TGG | + | 10705:4761-4780 | MS.gene068820:intergenic | 40.0% | |
GCAGTGAGATCAATGAAAGT+CGG | - | 10705:5296-5315 | MS.gene068820:intron | 40.0% | |
GGTAATTGCTGGAATTGATG+TGG | - | 10705:5274-5293 | MS.gene068820:intron | 40.0% | |
TTTGTCTTTGTCCTTGGTTC+TGG | - | 10705:4789-4808 | MS.gene068820:intron | 40.0% | |
AGCTTACCTTACCAGAACCA+AGG | + | 10705:4803-4822 | MS.gene068820:intergenic | 45.0% | |
GACTTGCAGCAAAACAAGGA+TGG | - | 10705:4715-4734 | MS.gene068820:intron | 45.0% | |
GGTAGACTTGCAGCAAAACA+AGG | - | 10705:4711-4730 | MS.gene068820:intron | 45.0% | |
GTGAGATCAATGAAAGTCGG+TGG | - | 10705:5299-5318 | MS.gene068820:intron | 45.0% | |
GTGTTCTGATACCCAAGTGA+GGG | + | 10705:5347-5366 | MS.gene068820:intergenic | 45.0% | |
TATACCTGGTCTCCATCTTG+AGG | + | 10705:4397-4416 | MS.gene068820:intergenic | 45.0% | |
TCATCATACCTCCCTCACTT+GGG | - | 10705:5333-5352 | MS.gene068820:intron | 45.0% | |
TGCTGTGTTCAGGTAATTGC+TGG | - | 10705:5263-5282 | MS.gene068820:intron | 45.0% | |
TGGGTATCAGAACACATCAC+AGG | - | 10705:5352-5371 | MS.gene068820:intron | 45.0% | |
TGTGTTCTGATACCCAAGTG+AGG | + | 10705:5348-5367 | MS.gene068820:intergenic | 45.0% | |
!! | CTTTGTCCTTGGTTCTGGTA+AGG | - | 10705:4794-4813 | MS.gene068820:intron | 45.0% |
!! | GAGAATGGATTGCTGTGTTC+AGG | - | 10705:5253-5272 | MS.gene068820:intron | 45.0% |
AGTTCCTCAAGATGGAGACC+AGG | - | 10705:4390-4409 | MS.gene068820:CDS | 50.0% | |
GTCATCATACCTCCCTCACT+TGG | - | 10705:5332-5351 | MS.gene068820:intron | 50.0% | |
TTCTGATACCCAAGTGAGGG+AGG | + | 10705:5344-5363 | MS.gene068820:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
10705 | gene | 4386 | 5391 | 4386 | ID=MS.gene068820 |
10705 | mRNA | 4386 | 5391 | 4386 | ID=MS.gene068820.t1;Parent=MS.gene068820 |
10705 | exon | 5366 | 5391 | 5366 | ID=MS.gene068820.t1.exon1;Parent=MS.gene068820.t1 |
10705 | CDS | 5366 | 5391 | 5366 | ID=cds.MS.gene068820.t1;Parent=MS.gene068820.t1 |
10705 | exon | 4962 | 5084 | 4962 | ID=MS.gene068820.t1.exon2;Parent=MS.gene068820.t1 |
10705 | CDS | 4962 | 5084 | 4962 | ID=cds.MS.gene068820.t1;Parent=MS.gene068820.t1 |
10705 | exon | 4386 | 4502 | 4386 | ID=MS.gene068820.t1.exon3;Parent=MS.gene068820.t1 |
10705 | CDS | 4386 | 4502 | 4386 | ID=cds.MS.gene068820.t1;Parent=MS.gene068820.t1 |
Gene Sequence |
Protein sequence |